AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028931.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028931.01.T01 MTR_5g078360 72.122 556 66 8 82 567 248 784 0.0 772
MsG0580028931.01.T02 MTR_5g078360 78.333 240 47 3 14 253 15 249 1.15e-116 355
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028931.01.T01 AT5G16630 45.102 490 185 11 136 567 277 740 4.09e-114 360
MsG0580028931.01.T01 AT5G16630 45.102 490 185 11 136 567 277 740 4.09e-114 360
MsG0580028931.01.T01 AT5G16630 38.251 366 143 10 136 443 277 617 2.85e-53 192
MsG0580028931.01.T02 AT5G16630 36.471 170 84 7 92 249 70 227 6.51e-14 71.6
MsG0580028931.01.T02 AT5G16630 36.471 170 84 7 92 249 70 227 6.51e-14 71.6
MsG0580028931.01.T02 AT5G16630 36.471 170 84 7 92 249 70 227 7.57e-14 71.2

Find 313 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGAAAATATTAAACTTTA+TGG 0.039387 5:-88878660 MsG0580028931.01.T01:CDS
CTCCCTGTCTTCTTACTTAT+TGG 0.086681 5:+88881904 None:intergenic
TGTCCCTTCCAGACCGTTTC+TGG 0.142153 5:+88882715 None:intergenic
TCTATTCTTGATTACTCTTA+TGG 0.155038 5:+88883167 None:intergenic
CTTTGTTTCTCCTCAGTTAC+TGG 0.155106 5:+88882909 None:intergenic
TCTTACTGTATTAACTATTA+AGG 0.172149 5:-88881877 MsG0580028931.01.T01:intron
TTGTACTTTCTGAGGCTTAA+TGG 0.198148 5:+88878722 None:intergenic
CTTACTGTATTAACTATTAA+GGG 0.271783 5:-88881876 MsG0580028931.01.T01:intron
CACAGCACCCTTGGATATTT+CGG 0.273593 5:+88884876 None:intergenic
AATGAATACTAAGGCAAAAT+AGG 0.275414 5:-88882316 MsG0580028931.01.T01:intron
AAGAAGTTGACTAGTGTTAA+TGG 0.275433 5:+88880378 None:intergenic
TTTAGGGACTGTAATAAATT+AGG 0.278755 5:+88882446 None:intergenic
TTCTTGCTCTCGTCTTGATA+TGG 0.281434 5:+88883089 None:intergenic
CTCATGCCAGGGTGAAGGGG+TGG 0.285743 5:-88882821 MsG0580028931.01.T02:three_prime_UTR
TTCTCGGAGCCATCTCTCTT+TGG 0.290930 5:+88878898 None:intergenic
CTTGGATGATTAAATAAATA+AGG 0.296179 5:-88883437 MsG0580028931.01.T02:three_prime_UTR
GGACATACGCCACCAGAATT+TGG 0.297384 5:-88882697 MsG0580028931.01.T01:intron
CGATGGGTACATTGATAAAA+AGG 0.305010 5:-88884514 MsG0580028931.01.T02:CDS
ATATAAATATGTCTACTATA+AGG 0.305781 5:-88881272 MsG0580028931.01.T01:intron
TAGTTATATAGTTAGGTATT+GGG 0.307752 5:-88881966 MsG0580028931.01.T01:intron
TTCCACCTCGTTCTCAAGAT+TGG 0.308510 5:+88882042 None:intergenic
CATGCCAGGGTGAAGGGGTG+GGG 0.313513 5:-88882819 MsG0580028931.01.T02:three_prime_UTR
GGTTCTTGTAAGGGGATCTT+TGG 0.314568 5:-88881119 MsG0580028931.01.T01:intron
ACATTCAATTCTATTGTCAT+AGG 0.319019 5:+88884438 None:intergenic
AACCATACCCATGAGATTAA+AGG 0.319564 5:+88883807 None:intergenic
CAACCAGATTAGACCTTTGC+AGG 0.321421 5:+88878848 None:intergenic
ACTCCCAGCGACAACAAAAC+TGG 0.328176 5:-88882653 MsG0580028931.01.T01:intron
AGGAAAATATTAAACTTTAT+GGG 0.334938 5:-88878659 MsG0580028931.01.T01:CDS
TGCTGTGAATTGATTATTGA+TGG 0.335894 5:-88880556 MsG0580028931.01.T01:CDS
CACCAGGTACAGTGCACTTA+AGG 0.338212 5:-88878069 MsG0580028931.01.T01:CDS
TGAAAGAGATGTACCTCTTC+AGG 0.342280 5:+88883588 None:intergenic
ATGCCAGGGTGAAGGGGTGG+GGG 0.347587 5:-88882818 MsG0580028931.01.T02:three_prime_UTR
ACCTTTGCAGGATGTTCATT+GGG 0.351208 5:+88878860 None:intergenic
GTTTCACTTGTAGCCCTTCT+CGG 0.353277 5:+88878882 None:intergenic
GAGTTTGAGCCGGTACAAAA+TGG 0.354784 5:-88884651 MsG0580028931.01.T02:CDS
AAACCTGCGGGTCACATCTT+TGG 0.357932 5:+88880456 None:intergenic
ATGGGATGATTAGAGAAATA+AGG 0.360147 5:-88881934 MsG0580028931.01.T01:intron
AACTTAGAGTCTGGAGCAAC+TGG 0.361257 5:-88879279 MsG0580028931.01.T01:CDS
TTAGTTATATAGTTAGGTAT+TGG 0.362072 5:-88881967 MsG0580028931.01.T01:intron
GCCCACTTCTTGTCTCAAAA+AGG 0.362154 5:+88882360 None:intergenic
GAACTGCATAGTTGTGTTGC+AGG 0.363227 5:-88882608 MsG0580028931.01.T01:intron
AGTAGGATCTCCTTTGTATT+GGG 0.364537 5:-88880630 MsG0580028931.01.T01:intron
CATTGTAGTAGAAATTCTAT+TGG 0.365967 5:-88884579 MsG0580028931.01.T02:CDS
TGACTGCACTACTGATTCTA+AGG 0.366300 5:-88878679 MsG0580028931.01.T01:CDS
ACGCACTGCACCAAGCAAAA+TGG 0.366368 5:-88880976 MsG0580028931.01.T01:CDS
GGTTAAGAGAAACTTCCTTC+TGG 0.373759 5:+88882092 None:intergenic
ACACAAGTCCTAGGGTAAAC+AGG 0.374218 5:+88878935 None:intergenic
CGAGCACATCCCGTCTATAA+TGG 0.375101 5:-88877965 MsG0580028931.01.T01:CDS
AATGATATGGAATTAGAATC+TGG 0.375146 5:-88883113 MsG0580028931.01.T02:three_prime_UTR
AAAGCAAAATTTCTTAAGAA+TGG 0.377327 5:-88881704 MsG0580028931.01.T01:intron
GCTCTTTCTGTTACAGCAGT+TGG 0.377597 5:-88880793 MsG0580028931.01.T01:CDS
CAAACTACTTAGTTCATAGT+TGG 0.378099 5:-88883463 MsG0580028931.01.T02:three_prime_UTR
ATATAATTAGTTATATAGTT+AGG 0.384339 5:-88881973 MsG0580028931.01.T01:intron
TAAGAGATGAAACATCAAAA+TGG 0.387665 5:+88881174 None:intergenic
GACCTTTGCAGGATGTTCAT+TGG 0.391697 5:+88878859 None:intergenic
CGAATAAGTTATGATCTTCA+TGG 0.394616 5:-88881374 MsG0580028931.01.T01:intron
AATGGCAAGTGGTTCTTGTA+AGG 0.396138 5:-88881129 MsG0580028931.01.T01:intron
CTCTATGTCCTTTAATCTCA+TGG 0.396904 5:-88883815 MsG0580028931.01.T02:CDS
CTCAGTGGAAAACCAAATTC+TGG 0.400450 5:+88882685 None:intergenic
CTACTAAAGTATATATTAGA+TGG 0.401463 5:+88883538 None:intergenic
TTGCTTCTGTAGCACTGATT+TGG 0.404166 5:+88879232 None:intergenic
AAACTACTTAGTTCATAGTT+GGG 0.404888 5:-88883462 MsG0580028931.01.T02:three_prime_UTR
TTCACTTGTCTCCTAGAAAA+GGG 0.404989 5:+88882792 None:intergenic
AACTGCTGTAGAAATTAGTT+GGG 0.405492 5:+88880664 None:intergenic
AATATGTCTACTATAAGGTT+TGG 0.410719 5:-88881267 MsG0580028931.01.T01:intron
CAACTGCTGTAGAAATTAGT+TGG 0.411925 5:+88880663 None:intergenic
CTCATAAATTAAAGAGGAAA+GGG 0.413230 5:-88880845 MsG0580028931.01.T01:CDS
ACTCTTGCCTTTGTATCACT+TGG 0.416807 5:+88882291 None:intergenic
CCCACCTTCGGTGTTGTGTT+GGG 0.418401 5:+88885019 None:intergenic
GTCCTTTAATCTCATGGGTA+TGG 0.418702 5:-88883809 MsG0580028931.01.T02:intron
TCAACTTTATATAATTGCTT+TGG 0.423672 5:-88881665 MsG0580028931.01.T01:intron
AAAGTCACCGCACTTTGCTT+TGG 0.431564 5:-88883640 MsG0580028931.01.T02:CDS
AGCGTGGTCAAGTGGATGTC+TGG 0.433333 5:-88878108 MsG0580028931.01.T01:CDS
AAGTAGGATCTCCTTTGTAT+TGG 0.433396 5:-88880631 MsG0580028931.01.T01:intron
TTGAAAGGTTTGATAGTTGT+GGG 0.434254 5:-88883488 MsG0580028931.01.T02:three_prime_UTR
AGTGTTGTGGAAGGATGAAT+TGG 0.435711 5:-88883306 MsG0580028931.01.T02:three_prime_UTR
GTATCTCTAATAGAAGAATT+CGG 0.438046 5:+88881844 None:intergenic
GCTTTGTGACATTTGATAGC+TGG 0.440998 5:+88883850 None:intergenic
CAACTAATTTCTACAGCAGT+TGG 0.443448 5:-88880662 MsG0580028931.01.T01:intron
AAACTATGTGAAAGCTCTCT+TGG 0.448992 5:-88881020 MsG0580028931.01.T01:CDS
AATCTTCCTCACGCGGTGAA+TGG 0.449667 5:-88878615 MsG0580028931.01.T01:CDS
CTTCACTTGTCTCCTAGAAA+AGG 0.452453 5:+88882791 None:intergenic
ATATTAAACTTTATGGGAAG+TGG 0.454726 5:-88878653 MsG0580028931.01.T01:CDS
CTAACTTGATTATAGACCTC+CGG 0.454726 5:+88881319 None:intergenic
GGAGACAAGTGAAGTGTCAA+TGG 0.455144 5:-88882782 MsG0580028931.01.T02:three_prime_UTR
TGTTTCTTTGCAGACGACTC+AGG 0.455574 5:+88884411 None:intergenic
AGTTAGGTATTGGGGCTGTC+AGG 0.457978 5:-88881957 MsG0580028931.01.T01:intron
GATGACTCAGATTGGGAAGA+TGG 0.458697 5:-88884483 MsG0580028931.01.T02:CDS
ATACATTGATAGATTTGTGC+TGG 0.461558 5:-88882001 MsG0580028931.01.T01:intron
TTTGAAAGGTTTGATAGTTG+TGG 0.462018 5:-88883489 MsG0580028931.01.T02:three_prime_UTR
ACAGTTTGCACACAAGTCCT+AGG 0.463689 5:+88878926 None:intergenic
TCGCTCTCTTCTTGTATAGC+TGG 0.465248 5:+88882066 None:intergenic
TTCTGGATCATCATTTCCTA+AGG 0.466078 5:+88882109 None:intergenic
AACAATATAACCTATTCATC+GGG 0.466169 5:+88877890 None:intergenic
ACGAAGTTCGTCTATTATCA+TGG 0.466784 5:-88883911 MsG0580028931.01.T02:CDS
AAGAACTGGATGACTCAGAT+TGG 0.467692 5:-88884491 MsG0580028931.01.T02:CDS
TGTCGTGTGTGCTGAGTTCA+AGG 0.468595 5:-88877939 MsG0580028931.01.T01:CDS
TCATGCCAGGGTGAAGGGGT+GGG 0.469409 5:-88882820 MsG0580028931.01.T02:three_prime_UTR
TCCCACCTTCGGTGTTGTGT+TGG 0.471785 5:+88885018 None:intergenic
TCCTCAATAGAGCTCCTTGT+AGG 0.472613 5:+88879189 None:intergenic
AACATTTGCTTAGATACCAT+TGG 0.473417 5:+88881086 None:intergenic
AGTTGTGTTGCAGGTTCCAT+TGG 0.476231 5:-88882599 MsG0580028931.01.T01:intron
TTAACTTTGTTACCACCTGC+AGG 0.479129 5:-88881496 MsG0580028931.01.T01:intron
GGTATTGGGGCTGTCAGGAT+GGG 0.479257 5:-88881952 MsG0580028931.01.T01:intron
AAAAGAATCAATGAATACTA+AGG 0.481104 5:-88882325 MsG0580028931.01.T01:intron
AATTCAAAACCAACCATAGC+AGG 0.481589 5:+88877998 None:intergenic
TGGTAGAACCAGAAACGGTC+TGG 0.482732 5:-88882723 MsG0580028931.01.T01:CDS
CTGTGCTCTTATCGAATACC+TGG 0.483975 5:+88881540 None:intergenic
TGGTTACCGTAGCTCATGCC+AGG 0.484070 5:-88882833 MsG0580028931.01.T02:three_prime_UTR
CTTATGTTTAAGCAAATATG+TGG 0.486509 5:-88881231 MsG0580028931.01.T01:intron
AACCTTAAGTGCACTGTACC+TGG 0.487431 5:+88878067 None:intergenic
TAGAGATACTAGTTCCGATC+AGG 0.487850 5:-88881830 MsG0580028931.01.T01:intron
CAGGTCACCCTGTTTACCCT+AGG 0.488850 5:-88878943 MsG0580028931.01.T01:CDS
AACAATGAAGATTGAAGACT+TGG 0.492821 5:-88882993 MsG0580028931.01.T02:three_prime_UTR
GTATGAGGAATCATGACATT+GGG 0.496616 5:-88883019 MsG0580028931.01.T02:three_prime_UTR
AGGTATTGGGGCTGTCAGGA+TGG 0.497198 5:-88881953 MsG0580028931.01.T01:intron
CGGGGTCAGTTTGTCTCGTA+AGG 0.497679 5:-88882476 MsG0580028931.01.T01:intron
CGAAATATCCAAGGGTGCTG+TGG 0.498356 5:-88884875 MsG0580028931.01.T02:CDS
ACCGCGTGAGGAAGATTCAA+TGG 0.500697 5:+88878621 None:intergenic
TTCTAAGAGTAAAGTGGGGT+CGG 0.504591 5:-88880767 MsG0580028931.01.T01:CDS
AAGATCAGAAATTCAGAGGC+GGG 0.505211 5:-88882495 MsG0580028931.01.T01:CDS
CAACAATATAACCTATTCAT+CGG 0.506086 5:+88877889 None:intergenic
TGCTGCGAGTCCGCAACGAT+CGG 0.507376 5:-88883281 MsG0580028931.01.T02:three_prime_UTR
CCACTGAGAAACTTAGAGTC+TGG 0.508190 5:-88879288 MsG0580028931.01.T01:CDS
TTGCCAATAAGTAAGAAGAC+AGG 0.508354 5:-88881907 MsG0580028931.01.T01:intron
TAGTAGAAATTCTATTGGAA+AGG 0.508427 5:-88884574 MsG0580028931.01.T02:CDS
CTGATTATCTCTAGCCCCAT+GGG 0.509009 5:-88882393 MsG0580028931.01.T01:intron
AGTTATATAGTTAGGTATTG+GGG 0.510115 5:-88881965 MsG0580028931.01.T01:intron
GCAGACAGCTTTGAAATATG+AGG 0.510767 5:-88883252 MsG0580028931.01.T02:three_prime_UTR
GTAGCTCATGCCAGGGTGAA+GGG 0.510813 5:-88882825 MsG0580028931.01.T02:three_prime_UTR
GATTCTGCACCTGCTATGGT+TGG 0.511076 5:-88878007 MsG0580028931.01.T01:CDS
AACTACTTAGTTCATAGTTG+GGG 0.513104 5:-88883461 MsG0580028931.01.T02:three_prime_UTR
TCAAAATCTTGTACTTTCTG+AGG 0.514663 5:+88878714 None:intergenic
ACCTGCTGGTTGGTTGGAAG+AGG 0.515197 5:+88879135 None:intergenic
AGAACTGGATGACTCAGATT+GGG 0.516004 5:-88884490 MsG0580028931.01.T02:CDS
GATTGATTCTGCACCTGCTA+TGG 0.516302 5:-88878011 MsG0580028931.01.T01:CDS
GTTTCTTTGCAGACGACTCA+GGG 0.516323 5:+88884412 None:intergenic
TGTCAGTTATATGTGATTCG+AGG 0.516683 5:+88880871 None:intergenic
CTCCCAGCGACAACAAAACT+GGG 0.516862 5:-88882652 MsG0580028931.01.T01:intron
TCCTACAAGGAGCTCTATTG+AGG 0.517013 5:-88879190 MsG0580028931.01.T01:CDS
TACATTGATAGATTTGTGCT+GGG 0.517152 5:-88882000 MsG0580028931.01.T01:intron
AGTTCGTCTATTATCATGGC+AGG 0.517327 5:-88883907 MsG0580028931.01.T02:CDS
GAGCTTTAAATCTTACAGCC+AGG 0.517661 5:-88881558 MsG0580028931.01.T01:CDS
TTGCAGTGAAGAAATTTGAC+AGG 0.518479 5:-88880597 MsG0580028931.01.T01:CDS
CACAACAATGGCAAGACGAC+AGG 0.518549 5:+88882248 None:intergenic
GGTAGTTGATGTTATTTACA+TGG 0.518608 5:-88881644 MsG0580028931.01.T01:intron
GCCTCTTCCAACCAACCAGC+AGG 0.519338 5:-88879136 MsG0580028931.01.T01:CDS
ACAAATCTCATAAATTAAAG+AGG 0.519546 5:-88880851 MsG0580028931.01.T01:CDS
TCGAAGAAATTGTACAGGTA+AGG 0.520414 5:-88882203 MsG0580028931.01.T01:intron
CGTAGCTCATGCCAGGGTGA+AGG 0.520539 5:-88882826 MsG0580028931.01.T02:three_prime_UTR
TATGTGGATGATGCTGTTGA+AGG 0.522372 5:-88882755 MsG0580028931.01.T01:CDS
ATCAAACATCATGTTGGCTA+AGG 0.522724 5:+88879098 None:intergenic
AATGGTATCTAAGCAAATGT+TGG 0.522858 5:-88881084 MsG0580028931.01.T01:CDS
TTACAAGAACCACTTGCCAT+TGG 0.523955 5:+88881131 None:intergenic
GGACTGTAATAAATTAGGTC+AGG 0.526037 5:+88882451 None:intergenic
TCTCATAAATTAAAGAGGAA+AGG 0.526651 5:-88880846 MsG0580028931.01.T01:CDS
TCAATCATTTAATGCCTGAT+CGG 0.528576 5:+88881816 None:intergenic
GTGTTGTGGAAGGATGAATT+GGG 0.530011 5:-88883305 MsG0580028931.01.T02:three_prime_UTR
AAAAGGATGGACTTGGCCCA+TGG 0.530860 5:+88882377 None:intergenic
CAGGTAAGGCAGCATTTACA+AGG 0.531857 5:-88882189 MsG0580028931.01.T01:intron
ATTTCAAAGCTGTCTGCTCT+AGG 0.532193 5:+88883258 None:intergenic
AGAATCAATCTCTAGCCTCT+TGG 0.533815 5:+88878024 None:intergenic
GGATGTTCTAAGAGTAAAGT+GGG 0.533972 5:-88880772 MsG0580028931.01.T01:CDS
CTCTTCTTGTATAGCTGGAG+TGG 0.535548 5:+88882071 None:intergenic
GTCAAATGGATAACAAAATG+AGG 0.537176 5:-88882950 MsG0580028931.01.T02:three_prime_UTR
ATGATATGGAATTAGAATCT+GGG 0.538638 5:-88883112 MsG0580028931.01.T02:three_prime_UTR
CACGACAATACCATTATAGA+CGG 0.541024 5:+88877955 None:intergenic
ATGGCAAGTGGTTCTTGTAA+GGG 0.544121 5:-88881128 MsG0580028931.01.T01:intron
GAAGAAATTTGACAGGAAAG+TGG 0.544717 5:-88880590 MsG0580028931.01.T01:CDS
TACAATATCAAACATCATGT+TGG 0.544880 5:+88879092 None:intergenic
CATTATAGACGGGATGTGCT+CGG 0.545650 5:+88877966 None:intergenic
GCAGTTGGATCTATGAAAGT+AGG 0.545778 5:-88880647 MsG0580028931.01.T01:intron
GAGACAAGTGAAGTGTCAAT+GGG 0.546658 5:-88882781 MsG0580028931.01.T02:three_prime_UTR
CATTAAATGATTGAAAGTGC+AGG 0.548426 5:-88881807 MsG0580028931.01.T01:intron
GATAGCTGGAGCAAGTGCGC+TGG 0.548698 5:+88883864 None:intergenic
AAAAGAGGGTTGAGAATGAG+AGG 0.548744 5:-88883397 MsG0580028931.01.T02:three_prime_UTR
ATGACTCAGATTGGGAAGAT+GGG 0.549098 5:-88884482 MsG0580028931.01.T02:CDS
TCTAAGAGTAAAGTGGGGTC+GGG 0.549637 5:-88880766 MsG0580028931.01.T01:intron
ACATTGGAAAGAAAGTCAAA+TGG 0.549844 5:-88882964 MsG0580028931.01.T02:three_prime_UTR
AAAGGATGGACTTGGCCCAT+GGG 0.551167 5:+88882378 None:intergenic
CTTTGGTACTTCAACACCAA+TGG 0.553064 5:-88881102 MsG0580028931.01.T01:CDS
GAAATATCCAAGGGTGCTGT+GGG 0.555051 5:-88884874 MsG0580028931.01.T02:CDS
TCTTGAATTTGAGATGCAGA+TGG 0.555803 5:-88880820 MsG0580028931.01.T01:CDS
AAGAAATTTGACAGGAAAGT+GGG 0.556253 5:-88880589 MsG0580028931.01.T01:CDS
CTGCTCTAGGCCGATCGTTG+CGG 0.558273 5:+88883271 None:intergenic
AGAAGCAAAGTCTTAGATGC+TGG 0.560035 5:-88883229 MsG0580028931.01.T02:three_prime_UTR
AAGAGAGATGGCTCCGAGAA+GGG 0.560448 5:-88878895 MsG0580028931.01.T01:CDS
TCAATTATAAGCGGATGAAG+AGG 0.562793 5:+88881741 None:intergenic
AAAGAGAGATGGCTCCGAGA+AGG 0.562954 5:-88878896 MsG0580028931.01.T01:CDS
GTAGAAAATATCAAACCTGC+GGG 0.563965 5:+88880444 None:intergenic
GAATTATAAAGCTCTTACTC+CGG 0.565062 5:-88881338 MsG0580028931.01.T01:CDS
GAAACTACCTGCTGGTTGGT+TGG 0.565218 5:+88879129 None:intergenic
TCTATGTCCTTTAATCTCAT+GGG 0.565273 5:-88883814 MsG0580028931.01.T02:CDS
CTAGAACGAGCGTGGTCAAG+TGG 0.569265 5:-88878116 MsG0580028931.01.T01:intron
TTACTGTATTAACTATTAAG+GGG 0.569266 5:-88881875 MsG0580028931.01.T01:intron
GTTGTAGGTTGAGTTTGAGC+CGG 0.569887 5:-88884661 MsG0580028931.01.T02:intron
AGAACCAGAAACGGTCTGGA+AGG 0.569950 5:-88882719 MsG0580028931.01.T01:CDS
AGGACGTTGAGTTAGAAACT+AGG 0.570154 5:-88879170 MsG0580028931.01.T01:CDS
GTCTGGAGCAACTGGAGGAG+TGG 0.572180 5:-88879271 MsG0580028931.01.T01:CDS
ACACAACTATGCAGTTCAAG+TGG 0.573697 5:+88882614 None:intergenic
CCGAGCTTCTGCTGAAGACA+AGG 0.575812 5:-88884382 MsG0580028931.01.T02:intron
AAGTGATACAAAGGCAAGAG+TGG 0.576804 5:-88882289 MsG0580028931.01.T01:intron
GGACGTTGAGTTAGAAACTA+GGG 0.577631 5:-88879169 MsG0580028931.01.T01:CDS
TAGCTCATGCCAGGGTGAAG+GGG 0.578046 5:-88882824 MsG0580028931.01.T02:three_prime_UTR
ATTATGGATCACTAACAGAA+AGG 0.579137 5:-88880238 MsG0580028931.01.T01:intron
ATCGTTGACCGAAATATCCA+AGG 0.579259 5:-88884884 MsG0580028931.01.T02:CDS
GAAGACTTGGTACATGACAT+TGG 0.580818 5:-88882980 MsG0580028931.01.T02:three_prime_UTR
GTAGCGGAGTCACAGATTCA+AGG 0.581798 5:-88882542 MsG0580028931.01.T01:CDS
TGATGTCGAAGAAATTGTAC+AGG 0.582811 5:-88882208 MsG0580028931.01.T01:intron
AGTATGAGGAATCATGACAT+TGG 0.583704 5:-88883020 MsG0580028931.01.T02:three_prime_UTR
CTTCACCCTGGCATGAGCTA+CGG 0.584445 5:+88882827 None:intergenic
TGGCAAGTGGTTCTTGTAAG+GGG 0.585661 5:-88881127 MsG0580028931.01.T01:intron
TGGATGTTCTAAGAGTAAAG+TGG 0.587047 5:-88880773 MsG0580028931.01.T01:CDS
GTATTCGATAAGAGCACAGA+AGG 0.588064 5:-88881536 MsG0580028931.01.T01:intron
AGAAGACAAGGTTGAAGCCA+TGG 0.588806 5:-88880533 MsG0580028931.01.T01:CDS
GCGAGTTAATTCAACATGGT+GGG 0.589568 5:-88879325 MsG0580028931.01.T01:CDS
TCCTAAGGCTACAAAAGTAG+TGG 0.590801 5:+88882124 None:intergenic
TCAGATTGCAGCTTTGTCGG+TGG 0.591353 5:-88881590 MsG0580028931.01.T01:intron
CTCGAAGCACGTGAGTGAAG+AGG 0.591567 5:-88883051 MsG0580028931.01.T02:three_prime_UTR
CACAAGTCCTAGGGTAAACA+GGG 0.591721 5:+88878936 None:intergenic
ACTGATTATCTCTAGCCCCA+TGG 0.593141 5:-88882394 MsG0580028931.01.T01:intron
GGGCCAAAGATGTGACCCGC+AGG 0.594785 5:-88880459 MsG0580028931.01.T01:intron
TCAAATGGATAACAAAATGA+GGG 0.594817 5:-88882949 MsG0580028931.01.T02:three_prime_UTR
TGTTCTGCATGCAGCAACCA+TGG 0.597755 5:+88880516 None:intergenic
ACAAAGTTAAAAGAAATGAA+AGG 0.598596 5:+88881509 None:intergenic
CCTTGTCTTCAGCAGAAGCT+CGG 0.599067 5:+88884382 None:intergenic
ACTATTCCATTCACCGCGTG+AGG 0.599144 5:+88878609 None:intergenic
GATGTTTCATCTCTTAAACC+AGG 0.600342 5:-88881167 MsG0580028931.01.T01:intron
CAATTATAAGCGGATGAAGA+GGG 0.600349 5:+88881742 None:intergenic
ATAGGATCCAAGTGATACAA+AGG 0.600494 5:-88882298 MsG0580028931.01.T01:intron
GGTGAATGGAATAGTTCCTA+AGG 0.602073 5:-88878601 MsG0580028931.01.T01:intron
TATACTTCTGCCCAATACAA+AGG 0.602473 5:+88880620 None:intergenic
GATTATTGATGGAGAAGACA+AGG 0.603317 5:-88880545 MsG0580028931.01.T01:CDS
GTCATGTAAGTATAGACGAT+GGG 0.603982 5:-88884530 MsG0580028931.01.T02:CDS
ATTGGCTGAACTTGTTCACA+AGG 0.604365 5:-88884263 MsG0580028931.01.T02:CDS
AAGTGTCAATGGGAATTATG+TGG 0.604497 5:-88882771 MsG0580028931.01.T02:three_prime_UTR
ACATTGATAGATTTGTGCTG+GGG 0.608317 5:-88881999 MsG0580028931.01.T01:intron
AGCAGAGCGAGGAACAGAAG+TGG 0.609798 5:-88882853 MsG0580028931.01.T02:three_prime_UTR
TGGGTTAAGTCAATTATAAG+CGG 0.610325 5:+88881732 None:intergenic
CATGTAATGAAATGAGACAA+AGG 0.611190 5:-88881419 MsG0580028931.01.T01:intron
CTGTTATGACCAAAGAGAGA+TGG 0.614412 5:-88878907 MsG0580028931.01.T01:CDS
GTTCAGCATGAATGCAGTGA+TGG 0.617377 5:-88880410 MsG0580028931.01.T01:intron
ACCCAATGAACATCCTGCAA+AGG 0.617404 5:-88878861 MsG0580028931.01.T01:intron
TGATACAGTTTGAAGTGTTG+TGG 0.617568 5:-88883319 MsG0580028931.01.T02:three_prime_UTR
ACAAAATGGAACTCAAGTTG+TGG 0.617833 5:-88884637 MsG0580028931.01.T02:CDS
AGTAGAAAATATCAAACCTG+CGG 0.618795 5:+88880443 None:intergenic
GTCAAACTCACAAACTTCTG+AGG 0.619706 5:-88880907 MsG0580028931.01.T01:CDS
GCCAAAGCGTAAAAGAGACG+TGG 0.621267 5:-88882520 MsG0580028931.01.T01:CDS
CAGTTTGCACACAAGTCCTA+GGG 0.621494 5:+88878927 None:intergenic
ACTACTTAGTTCATAGTTGG+GGG 0.622450 5:-88883460 MsG0580028931.01.T02:three_prime_UTR
ACGACAATACCATTATAGAC+GGG 0.622990 5:+88877956 None:intergenic
GAACCAGAAACGGTCTGGAA+GGG 0.623932 5:-88882718 MsG0580028931.01.T01:CDS
AGATCAGAAATTCAGAGGCG+GGG 0.624364 5:-88882494 MsG0580028931.01.T01:CDS
TCACTTGTCTCCTAGAAAAG+GGG 0.624719 5:+88882793 None:intergenic
TGCTGTAGAAATTAGTTGGG+GGG 0.625544 5:+88880667 None:intergenic
TAATGAAATGAGACAAAGGA+AGG 0.626238 5:-88881415 MsG0580028931.01.T01:intron
AGCGAGTTAATTCAACATGG+TGG 0.628936 5:-88879326 MsG0580028931.01.T01:CDS
GGGCAAGATCAGAAATTCAG+AGG 0.630594 5:-88882499 MsG0580028931.01.T01:CDS
AGAGGAGGTTAAACAAGTAG+CGG 0.631973 5:-88882558 MsG0580028931.01.T01:CDS
CAAGATCAGAAATTCAGAGG+CGG 0.632868 5:-88882496 MsG0580028931.01.T01:CDS
ACAGTTTGAAGTGTTGTGGA+AGG 0.633272 5:-88883315 MsG0580028931.01.T02:three_prime_UTR
ACGTGAGGGTAGTCCTGAAG+AGG 0.633646 5:-88883601 MsG0580028931.01.T02:CDS
CTGCTACGTCGTGCTAACAA+AGG 0.633701 5:-88884847 MsG0580028931.01.T02:CDS
TAATTCAGTCTCAGAATGAA+CGG 0.635409 5:-88881776 MsG0580028931.01.T01:intron
TTAGAGTCTGGAGCAACTGG+AGG 0.635750 5:-88879276 MsG0580028931.01.T01:CDS
CATTGATAGATTTGTGCTGG+GGG 0.635988 5:-88881998 MsG0580028931.01.T01:intron
CATGTGAGCAGTGTCGCCAA+TGG 0.636041 5:+88882583 None:intergenic
AGTGATACAAAGGCAAGAGT+GGG 0.636189 5:-88882288 MsG0580028931.01.T01:intron
ATATTAGGTACTGTATGAAG+TGG 0.639077 5:-88879365 MsG0580028931.01.T01:intron
TTAGGAAATGATGATCCAGA+AGG 0.639337 5:-88882107 MsG0580028931.01.T01:intron
ATCAGCTTTAGAATTACGTG+AGG 0.639521 5:-88883616 MsG0580028931.01.T02:CDS
AAGGATGGACTTGGCCCATG+GGG 0.639940 5:+88882379 None:intergenic
TTATAAAGCTCTTACTCCGG+AGG 0.640025 5:-88881335 MsG0580028931.01.T01:CDS
ACTGCTGTAGAAATTAGTTG+GGG 0.640359 5:+88880665 None:intergenic
TGCCAATAAGTAAGAAGACA+GGG 0.640927 5:-88881906 MsG0580028931.01.T01:intron
ATTGAGTATGAAGGATACGT+AGG 0.641757 5:-88882417 MsG0580028931.01.T01:intron
ACCTTACTAAAAGACAAACT+AGG 0.642960 5:+88883512 None:intergenic
TCATAAATTAAAGAGGAAAG+GGG 0.644539 5:-88880844 MsG0580028931.01.T01:CDS
TCTGAGAAATGTCTTCCACC+AGG 0.648250 5:-88878085 MsG0580028931.01.T01:CDS
GGAAGATGGGACAGTTGCCG+TGG 0.650172 5:-88884469 MsG0580028931.01.T02:CDS
ACCATTGAATCTTCCTCACG+CGG 0.653369 5:-88878622 MsG0580028931.01.T01:CDS
TGTCATAGGATGATCATCCA+CGG 0.653704 5:+88884452 None:intergenic
GTCAACATGTGAGACATGAA+CGG 0.656227 5:-88882150 MsG0580028931.01.T01:intron
GGGAGTGACAATCCCCTCAG+TGG 0.656239 5:+88882670 None:intergenic
GAAATCAGAGAAGCAGAGCG+AGG 0.656570 5:-88882864 MsG0580028931.01.T02:three_prime_UTR
AAATCCCAACACAACACCGA+AGG 0.656594 5:-88885023 MsG0580028931.01.T02:intron
CACAGCGAGTTAATTCAACA+TGG 0.657556 5:-88879329 MsG0580028931.01.T01:CDS
GCGATCCAATCTTGAGAACG+AGG 0.662796 5:-88882047 MsG0580028931.01.T01:intron
CCAAAGCGTAAAAGAGACGT+GGG 0.663354 5:-88882519 MsG0580028931.01.T01:CDS
TCGTTGACCGAAATATCCAA+GGG 0.665933 5:-88884883 MsG0580028931.01.T02:CDS
TGCTTATTAACCAGTAACTG+AGG 0.666539 5:-88882919 MsG0580028931.01.T02:three_prime_UTR
AGTGGAAAACCAAATTCTGG+TGG 0.669446 5:+88882688 None:intergenic
GGTCATGTAAGTATAGACGA+TGG 0.669620 5:-88884531 MsG0580028931.01.T02:CDS
CTACGTCGTGCTAACAAAGG+TGG 0.670161 5:-88884844 MsG0580028931.01.T02:CDS
GCGCATATTCTGTTGCCAAG+AGG 0.670329 5:-88878039 MsG0580028931.01.T01:CDS
GTTCAAGGACATACTGCTAG+AGG 0.671109 5:-88877924 MsG0580028931.01.T01:CDS
ATTGGTTTAAAAGATTGACC+TGG 0.673292 5:+88881149 None:intergenic
GGTTACCGTAGCTCATGCCA+GGG 0.675453 5:-88882832 MsG0580028931.01.T02:three_prime_UTR
CACTGCTCACATGACAGAGG+AGG 0.675591 5:-88882573 MsG0580028931.01.T01:CDS
TGTTGTGGAAGGATGAATTG+GGG 0.678677 5:-88883304 MsG0580028931.01.T02:three_prime_UTR
CTGCTGTAGAAATTAGTTGG+GGG 0.681676 5:+88880666 None:intergenic
GATTCTGCAGATGAGAAATG+TGG 0.684607 5:-88884552 MsG0580028931.01.T02:CDS
CCAGACTCTAAGTTTCTCAG+TGG 0.685977 5:+88879288 None:intergenic
ATCCAATCTTGAGAACGAGG+TGG 0.690413 5:-88882044 MsG0580028931.01.T01:intron
TTTCTTTGCAGACGACTCAG+GGG 0.695620 5:+88884413 None:intergenic
CGACACTGCTCACATGACAG+AGG 0.699654 5:-88882576 MsG0580028931.01.T01:CDS
CTTAAGTGCACTGTACCTGG+TGG 0.700022 5:+88878070 None:intergenic
TCAGCTTTAGAATTACGTGA+GGG 0.702528 5:-88883615 MsG0580028931.01.T02:CDS
GCTGATGCCAAAGCAAAGTG+CGG 0.711583 5:+88883633 None:intergenic
TGTACTGAGAAACACAACAA+TGG 0.713662 5:+88882236 None:intergenic
TCCCAGCGACAACAAAACTG+GGG 0.722957 5:-88882651 MsG0580028931.01.T01:intron
CAATAAGTAAGAAGACAGGG+AGG 0.745625 5:-88881903 MsG0580028931.01.T01:intron
GATGTTCTAAGAGTAAAGTG+GGG 0.775780 5:-88880771 MsG0580028931.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATTAGTTATATAGTT+AGG - Chr5:88881005-88881024 MsG0580028931.01.T01:CDS 10.0%
!!! AATTTTCATAAACAAAATAA+AGG + Chr5:88882668-88882687 None:intergenic 10.0%
!! AAAAGAATAAAAAGAGTTAT+AGG - Chr5:88882271-88882290 MsG0580028931.01.T01:intron 15.0%
!! AAGGAAAATATTAAACTTTA+TGG - Chr5:88884318-88884337 MsG0580028931.01.T02:intron 15.0%
!! AGGAAAATATTAAACTTTAT+GGG - Chr5:88884319-88884338 MsG0580028931.01.T02:intron 15.0%
!! ATATAAATATGTCTACTATA+AGG - Chr5:88881706-88881725 MsG0580028931.01.T01:intron 15.0%
!! ATTCCAAAAAAAAAAAATTC+AGG + Chr5:88883319-88883338 None:intergenic 15.0%
!!! AAAATTCAGGTTTTTATTTT+AGG + Chr5:88883306-88883325 None:intergenic 15.0%
!!! AAACCTGAATTTTTTTTTTT+TGG - Chr5:88883313-88883332 MsG0580028931.01.T02:three_prime_UTR 15.0%
!!! AAATTCAGGTTTTTATTTTA+GGG + Chr5:88883305-88883324 None:intergenic 15.0%
!!! GATGATATATATTTTCTATT+TGG - Chr5:88882819-88882838 MsG0580028931.01.T02:three_prime_UTR 15.0%
!!! TATTGATTATCACAAAAATA+GGG + Chr5:88878923-88878942 None:intergenic 15.0%
!!! TTATATTTTTGTGAATTCTT+AGG - Chr5:88878691-88878710 MsG0580028931.01.T01:CDS 15.0%
!! AAAAGAATCAATGAATACTA+AGG - Chr5:88880653-88880672 MsG0580028931.01.T01:intron 20.0%
!! AAAATTGGAATTGTAATCAA+AGG + Chr5:88884750-88884769 None:intergenic 20.0%
!! AAAGCAAAATTTCTTAAGAA+TGG - Chr5:88881274-88881293 MsG0580028931.01.T01:CDS 20.0%
!! ACAAAGTTAAAAGAAATGAA+AGG + Chr5:88881472-88881491 None:intergenic 20.0%
!! ACAAATCTCATAAATTAAAG+AGG - Chr5:88882127-88882146 MsG0580028931.01.T01:intron 20.0%
!! AGTTGAACATTATTTAGATT+TGG - Chr5:88884539-88884558 MsG0580028931.01.T02:CDS 20.0%
!! CATACTCAATCAAAAATTTA+GGG + Chr5:88880551-88880570 None:intergenic 20.0%
!! CTACTAAAGTATATATTAGA+TGG + Chr5:88879443-88879462 None:intergenic 20.0%
!! CTGAAATTGTTTGATAAATT+GGG - Chr5:88878978-88878997 MsG0580028931.01.T01:intron 20.0%
!! CTTACTGTATTAACTATTAA+GGG - Chr5:88881102-88881121 MsG0580028931.01.T01:CDS 20.0%
!! CTTGGATGATTAAATAAATA+AGG - Chr5:88879541-88879560 MsG0580028931.01.T01:intron 20.0%
!! GATACATGAACAAAAAAATA+TGG - Chr5:88882917-88882936 MsG0580028931.01.T02:three_prime_UTR 20.0%
!! TAGTTATATAGTTAGGTATT+GGG - Chr5:88881012-88881031 MsG0580028931.01.T01:CDS 20.0%
!! TCAACTTTATATAATTGCTT+TGG - Chr5:88881313-88881332 MsG0580028931.01.T01:CDS 20.0%
!! TCATACTCAATCAAAAATTT+AGG + Chr5:88880552-88880571 None:intergenic 20.0%
!! TCTTACTGTATTAACTATTA+AGG - Chr5:88881101-88881120 MsG0580028931.01.T01:CDS 20.0%
!! TGAAATTGTTTGATAAATTG+GGG - Chr5:88878979-88878998 MsG0580028931.01.T01:intron 20.0%
!! TTAAATGCATAGAATATCTT+CGG - Chr5:88878825-88878844 MsG0580028931.01.T01:intron 20.0%
!! TTACTGTATTAACTATTAAG+GGG - Chr5:88881103-88881122 MsG0580028931.01.T01:CDS 20.0%
!! TTAGTTATATAGTTAGGTAT+TGG - Chr5:88881011-88881030 MsG0580028931.01.T01:CDS 20.0%
!!! AAATTTTTGATTGAGTATGA+AGG - Chr5:88880552-88880571 MsG0580028931.01.T01:CDS 20.0%
!!! AAGAAATTTTGCTTTCATTT+TGG + Chr5:88881269-88881288 None:intergenic 20.0%
!!! AGAAATTTTGCTTTCATTTT+GGG + Chr5:88881268-88881287 None:intergenic 20.0%
!!! ATTCCAATTTTTAAACAAAC+TGG - Chr5:88884759-88884778 MsG0580028931.01.T02:intron 20.0%
!!! CTATTGATTATCACAAAAAT+AGG + Chr5:88878924-88878943 None:intergenic 20.0%
!!! CTATTTAAGAATTTTCCAAA+GGG + Chr5:88884471-88884490 None:intergenic 20.0%
!!! GTTGGTTTTGAATTTAAAAA+TGG - Chr5:88884989-88885008 MsG0580028931.01.T02:intron 20.0%
!!! GTTTGATTTTGATTGAATTA+AGG + Chr5:88883047-88883066 None:intergenic 20.0%
!!! TCATAAGACAATGATTTTTT+AGG + Chr5:88881931-88881950 None:intergenic 20.0%
!!! TCTATTTAAGAATTTTCCAA+AGG + Chr5:88884472-88884491 None:intergenic 20.0%
!!! TCTGAAATTGTTTGATAAAT+TGG - Chr5:88878977-88878996 MsG0580028931.01.T01:intron 20.0%
!!! TGATCCATAATGTTTTTAAT+GGG + Chr5:88882731-88882750 None:intergenic 20.0%
!!! TTTTTATTCTTTTAACGAAC+AGG + Chr5:88882264-88882283 None:intergenic 20.0%
! AAACCCCATTAAAAACATTA+TGG - Chr5:88882724-88882743 MsG0580028931.01.T01:CDS 25.0%
! AAACTACTTAGTTCATAGTT+GGG - Chr5:88879516-88879535 MsG0580028931.01.T01:intron 25.0%
! AATATGTCTACTATAAGGTT+TGG - Chr5:88881711-88881730 MsG0580028931.01.T01:intron 25.0%
! AATGAATACTAAGGCAAAAT+AGG - Chr5:88880662-88880681 MsG0580028931.01.T01:intron 25.0%
! AATGATATGGAATTAGAATC+TGG - Chr5:88879865-88879884 MsG0580028931.01.T01:intron 25.0%
! AATTACGTGCATATTAATAG+GGG + Chr5:88884195-88884214 None:intergenic 25.0%
! ACAAATTATGTAAAAGCAAC+AGG + Chr5:88878200-88878219 None:intergenic 25.0%
! ACATTCAATTCTATTGTCAT+AGG + Chr5:88878543-88878562 None:intergenic 25.0%
! ATATTAAACTTTATGGGAAG+TGG - Chr5:88884325-88884344 MsG0580028931.01.T02:intron 25.0%
! ATGATATGGAATTAGAATCT+GGG - Chr5:88879866-88879885 MsG0580028931.01.T01:intron 25.0%
! CAAATTATGTAAAAGCAACA+GGG + Chr5:88878199-88878218 None:intergenic 25.0%
! CAATTACGTGCATATTAATA+GGG + Chr5:88884196-88884215 None:intergenic 25.0%
! CATTGTAGTAGAAATTCTAT+TGG - Chr5:88878399-88878418 MsG0580028931.01.T01:intron 25.0%
! CGATATACAATTCAAAAAAG+TGG + Chr5:88882877-88882896 None:intergenic 25.0%
! CTAGTACATATTGACATATT+AGG - Chr5:88883598-88883617 MsG0580028931.01.T02:CDS 25.0%
! CTCATAAATTAAAGAGGAAA+GGG - Chr5:88882133-88882152 MsG0580028931.01.T01:intron 25.0%
! CTTATGTTTAAGCAAATATG+TGG - Chr5:88881747-88881766 MsG0580028931.01.T01:intron 25.0%
! GCAATGAAAAAATTATCATC+TGG + Chr5:88879009-88879028 None:intergenic 25.0%
! GGAAAATTCTTAAATAGACA+CGG - Chr5:88884474-88884493 MsG0580028931.01.T02:CDS 25.0%
! GTATCTCTAATAGAAGAATT+CGG + Chr5:88881137-88881156 None:intergenic 25.0%
! TAAGAGATGAAACATCAAAA+TGG + Chr5:88881807-88881826 None:intergenic 25.0%
! TAATAGTTAACCTGAATAAG+AGG + Chr5:88878795-88878814 None:intergenic 25.0%
! TACAATATCAAACATCATGT+TGG + Chr5:88883889-88883908 None:intergenic 25.0%
! TAGTAGAAATTCTATTGGAA+AGG - Chr5:88878404-88878423 MsG0580028931.01.T01:intron 25.0%
! TATCAAATACTTCATCCAAA+GGG - Chr5:88883993-88884012 MsG0580028931.01.T02:intron 25.0%
! TCAAATGGATAACAAAATGA+GGG - Chr5:88880029-88880048 MsG0580028931.01.T01:intron 25.0%
! TCAATTACGTGCATATTAAT+AGG + Chr5:88884197-88884216 None:intergenic 25.0%
! TCACTTTATGTCATAGAAAA+TGG - Chr5:88883961-88883980 MsG0580028931.01.T02:intron 25.0%
! TCATAAATTAAAGAGGAAAG+GGG - Chr5:88882134-88882153 MsG0580028931.01.T01:intron 25.0%
! TCTATTCTTGATTACTCTTA+TGG + Chr5:88879814-88879833 None:intergenic 25.0%
! TCTCATAAATTAAAGAGGAA+AGG - Chr5:88882132-88882151 MsG0580028931.01.T01:intron 25.0%
! TTATGCTTAGTAATTGTCAT+TGG + Chr5:88878031-88878050 None:intergenic 25.0%
! TTGTAACCTACCAATTAATT+TGG + Chr5:88883153-88883172 None:intergenic 25.0%
! TTTAGGGACTGTAATAAATT+AGG + Chr5:88880535-88880554 None:intergenic 25.0%
! TTTCTATGACATAAAGTGAA+TGG + Chr5:88883960-88883979 None:intergenic 25.0%
!! ACACTATGATTCAAATTTTC+AGG + Chr5:88882051-88882070 None:intergenic 25.0%
!! AGTTATATAGTTAGGTATTG+GGG - Chr5:88881013-88881032 MsG0580028931.01.T01:CDS 25.0%
!! ATAAAGTGAATGGTTTTTGT+AGG + Chr5:88883950-88883969 None:intergenic 25.0%
!! TATTTTCTAAGTTATTGCCT+TGG + Chr5:88884710-88884729 None:intergenic 25.0%
!! TCAACCCTCTTTTTATATAT+AGG + Chr5:88879574-88879593 None:intergenic 25.0%
!! TGTCCAGTTTGTTTAAAAAT+TGG + Chr5:88884765-88884784 None:intergenic 25.0%
!! TTCACCATTTGTATAGTTTT+TGG + Chr5:88879319-88879338 None:intergenic 25.0%
!! TTTTAATCACCTAGTGATAA+TGG - Chr5:88877988-88878007 MsG0580028931.01.T01:CDS 25.0%
!! TTTTGTGAATTCTTAGGAAT+TGG - Chr5:88878697-88878716 MsG0580028931.01.T01:CDS 25.0%
!!! AGTATATGTTGTTTCGTATT+GGG - Chr5:88879204-88879223 MsG0580028931.01.T01:CDS 25.0%
!!! GATCCATAATGTTTTTAATG+GGG + Chr5:88882730-88882749 None:intergenic 25.0%
!!! GTGATCCATAATGTTTTTAA+TGG + Chr5:88882732-88882751 None:intergenic 25.0%
!!! TAGTATATGTTGTTTCGTAT+TGG - Chr5:88879203-88879222 MsG0580028931.01.T01:CDS 25.0%
!!! TCTCACATTTTTAGAATAAC+AGG - Chr5:88882688-88882707 MsG0580028931.01.T01:intron 25.0%
!!! TCTTTTAGTAAGGTTTTGAA+AGG - Chr5:88879475-88879494 MsG0580028931.01.T01:intron 25.0%
!!! TTTTTTTGGAATTTTTGCCT+GGG - Chr5:88883327-88883346 MsG0580028931.01.T02:three_prime_UTR 25.0%
!!! TTTTTTTTGGAATTTTTGCC+TGG - Chr5:88883326-88883345 MsG0580028931.01.T02:three_prime_UTR 25.0%
AAAAATGGTAGAACCAGAAA+CGG - Chr5:88880250-88880269 MsG0580028931.01.T01:intron 30.0%
AACAATGAAGATTGAAGACT+TGG - Chr5:88879985-88880004 MsG0580028931.01.T01:intron 30.0%
AACAGCCAAAAACAATATAC+CGG + Chr5:88877907-88877926 None:intergenic 30.0%
AACTACTTAGTTCATAGTTG+GGG - Chr5:88879517-88879536 MsG0580028931.01.T01:intron 30.0%
AACTGCTGTAGAAATTAGTT+GGG + Chr5:88882317-88882336 None:intergenic 30.0%
AAGAAATTTGACAGGAAAGT+GGG - Chr5:88882389-88882408 MsG0580028931.01.T01:intron 30.0%
AAGAAGTTGACTAGTGTTAA+TGG + Chr5:88882603-88882622 None:intergenic 30.0%
AATAGAAGCCAAAGAAAAAG+TGG - Chr5:88879828-88879847 MsG0580028931.01.T01:intron 30.0%
ACAAACTCTTGAATGCAAAA+TGG - Chr5:88883174-88883193 MsG0580028931.01.T02:three_prime_UTR 30.0%
ACATTGGAAAGAAAGTCAAA+TGG - Chr5:88880014-88880033 MsG0580028931.01.T01:intron 30.0%
ACCTTACTAAAAGACAAACT+AGG + Chr5:88879469-88879488 None:intergenic 30.0%
AGTAGAAAATATCAAACCTG+CGG + Chr5:88882538-88882557 None:intergenic 30.0%
ATACATTGATAGATTTGTGC+TGG - Chr5:88880977-88880996 MsG0580028931.01.T01:CDS 30.0%
ATAGCTCCAAATTAATTGGT+AGG - Chr5:88883144-88883163 MsG0580028931.01.T02:three_prime_UTR 30.0%
ATCACAAAAATAGGGATGTT+AGG + Chr5:88878915-88878934 None:intergenic 30.0%
ATGGGATGATTAGAGAAATA+AGG - Chr5:88881044-88881063 MsG0580028931.01.T01:CDS 30.0%
ATTACGTGCATATTAATAGG+GGG + Chr5:88884194-88884213 None:intergenic 30.0%
ATTATGGATCACTAACAGAA+AGG - Chr5:88882740-88882759 MsG0580028931.01.T01:CDS 30.0%
ATTTAGATTTGGATCTCGAA+AGG - Chr5:88884550-88884569 MsG0580028931.01.T02:CDS 30.0%
CAAACTACTTAGTTCATAGT+TGG - Chr5:88879515-88879534 MsG0580028931.01.T01:intron 30.0%
CATGCCAAAAACTATACAAA+TGG - Chr5:88879312-88879331 MsG0580028931.01.T01:CDS 30.0%
CATGTAATGAAATGAGACAA+AGG - Chr5:88881559-88881578 MsG0580028931.01.T01:CDS 30.0%
CATTGATAAAAAGGAAGAAC+TGG - Chr5:88878473-88878492 MsG0580028931.01.T01:intron 30.0%
CGAATAAGTTATGATCTTCA+TGG - Chr5:88881604-88881623 MsG0580028931.01.T01:intron 30.0%
GAATTATAAAGCTCTTACTC+CGG - Chr5:88881640-88881659 MsG0580028931.01.T01:intron 30.0%
GCTGCCTATATATAAAAAGA+GGG - Chr5:88879567-88879586 MsG0580028931.01.T01:intron 30.0%
GTAGGATACTAGATTGAATT+GGG - Chr5:88883401-88883420 MsG0580028931.01.T02:three_prime_UTR 30.0%
GTATCAAATACTTCATCCAA+AGG - Chr5:88883992-88884011 MsG0580028931.01.T02:intron 30.0%
GTCAAATGGATAACAAAATG+AGG - Chr5:88880028-88880047 MsG0580028931.01.T01:intron 30.0%
TAATGAAATGAGACAAAGGA+AGG - Chr5:88881563-88881582 MsG0580028931.01.T01:CDS 30.0%
TAATTCAGTCTCAGAATGAA+CGG - Chr5:88881202-88881221 MsG0580028931.01.T01:intron 30.0%
TACATTGATAGATTTGTGCT+GGG - Chr5:88880978-88880997 MsG0580028931.01.T01:CDS 30.0%
TAGATTGAATTGGGATACAT+AGG - Chr5:88883410-88883429 MsG0580028931.01.T02:three_prime_UTR 30.0%
TCAAAATCTTGTACTTTCTG+AGG + Chr5:88884267-88884286 None:intergenic 30.0%
TCAATCATTTAATGCCTGAT+CGG + Chr5:88881165-88881184 None:intergenic 30.0%
TCATCAAAACCATTATCACT+AGG + Chr5:88878000-88878019 None:intergenic 30.0%
TCTATGTCCTTTAATCTCAT+GGG - Chr5:88879164-88879183 MsG0580028931.01.T01:CDS 30.0%
TGCTGCCTATATATAAAAAG+AGG - Chr5:88879566-88879585 MsG0580028931.01.T01:intron 30.0%
TGCTGTGAATTGATTATTGA+TGG - Chr5:88882422-88882441 MsG0580028931.01.T01:intron 30.0%
TGGAATTGTAATCAAAGGTT+TGG + Chr5:88884745-88884764 None:intergenic 30.0%
TGGGTTAAGTCAATTATAAG+CGG + Chr5:88881249-88881268 None:intergenic 30.0%
TGTAGGATACTAGATTGAAT+TGG - Chr5:88883400-88883419 MsG0580028931.01.T02:three_prime_UTR 30.0%
TGTCTTTAAACATTTGTGAG+TGG - Chr5:88878627-88878646 MsG0580028931.01.T01:CDS 30.0%
TTAAAAATTGTTCCCACCTT+CGG + Chr5:88877974-88877993 None:intergenic 30.0%
TTACCCAAAAATATCTTTCC+AGG - Chr5:88884221-88884240 MsG0580028931.01.T02:intron 30.0%
! AGATCAGAAGAACTTGATTT+TGG + Chr5:88878296-88878315 None:intergenic 30.0%
! AGGTCAATCTTTTAAACCAA+TGG - Chr5:88881831-88881850 MsG0580028931.01.T01:intron 30.0%
! ATAATCATTTTACTCGTGAG+TGG - Chr5:88878047-88878066 MsG0580028931.01.T01:CDS 30.0%
! ATATTAGGTACTGTATGAAG+TGG - Chr5:88883613-88883632 MsG0580028931.01.T02:CDS 30.0%
! ATGATTCTTTTGTTCCTACA+AGG - Chr5:88883775-88883794 MsG0580028931.01.T02:intron 30.0%
! ATTGGTTTAAAAGATTGACC+TGG + Chr5:88881832-88881851 None:intergenic 30.0%
! CACTTCTAAGAAAAAGACAA+CGG - Chr5:88878157-88878176 MsG0580028931.01.T01:intron 30.0%
! CATTAAATGATTGAAAGTGC+AGG - Chr5:88881171-88881190 MsG0580028931.01.T01:intron 30.0%
! GGTAGTTGATGTTATTTACA+TGG - Chr5:88881334-88881353 MsG0580028931.01.T01:CDS 30.0%
! TAAATTTGAAGTCTTCTGGA+GGG - Chr5:88883248-88883267 MsG0580028931.01.T02:three_prime_UTR 30.0%
! TTGAAAGGTTTGATAGTTGT+GGG - Chr5:88879490-88879509 MsG0580028931.01.T01:intron 30.0%
! TTTGAAAGGTTTGATAGTTG+TGG - Chr5:88879489-88879508 MsG0580028931.01.T01:intron 30.0%
! TTTTGGCATGGAAATTTTCA+TGG + Chr5:88879302-88879321 None:intergenic 30.0%
!! TCCTAGTTTGTCTTTTAGTA+AGG - Chr5:88879465-88879484 MsG0580028931.01.T01:intron 30.0%
!!! AAGAGGTTTTTTGTAGTATG+AGG - Chr5:88879944-88879963 MsG0580028931.01.T01:intron 30.0%
!!! CATTTGTATAGTTTTTGGCA+TGG + Chr5:88879314-88879333 None:intergenic 30.0%
!!! CTTTTGAAATCGTATAACCA+TGG - Chr5:88878270-88878289 MsG0580028931.01.T01:intron 30.0%
!!! TGTTCAACTTCTGAAGTTTT+TGG + Chr5:88878381-88878400 None:intergenic 30.0%
!!! TTTATTTTAGGGATCAGTCA+TGG + Chr5:88883294-88883313 None:intergenic 30.0%
AAACTATGTGAAAGCTCTCT+TGG - Chr5:88881958-88881977 MsG0580028931.01.T01:intron 35.0%
AACCATACCCATGAGATTAA+AGG + Chr5:88879174-88879193 None:intergenic 35.0%
AACTGCAAGTGTTACAAACA+AGG + Chr5:88879279-88879298 None:intergenic 35.0%
AAGTAGGATCTCCTTTGTAT+TGG - Chr5:88882347-88882366 MsG0580028931.01.T01:intron 35.0%
AAGTGTCAATGGGAATTATG+TGG - Chr5:88880207-88880226 MsG0580028931.01.T01:intron 35.0%
AATTCAAAACCAACCATAGC+AGG + Chr5:88884983-88885002 None:intergenic 35.0%
ACATTGATAGATTTGTGCTG+GGG - Chr5:88880979-88880998 MsG0580028931.01.T01:CDS 35.0%
ACGAAGTTCGTCTATTATCA+TGG - Chr5:88879067-88879086 MsG0580028931.01.T01:intron 35.0%
ACGACAATACCATTATAGAC+GGG + Chr5:88885025-88885044 None:intergenic 35.0%
ACTACTTAGTTCATAGTTGG+GGG - Chr5:88879518-88879537 MsG0580028931.01.T01:intron 35.0%
ACTGCTGTAGAAATTAGTTG+GGG + Chr5:88882316-88882335 None:intergenic 35.0%
ACTTCTTGTCTCAAAAAGGA+TGG + Chr5:88880617-88880636 None:intergenic 35.0%
AGTAGGATCTCCTTTGTATT+GGG - Chr5:88882348-88882367 MsG0580028931.01.T01:intron 35.0%
AGTATGAGGAATCATGACAT+TGG - Chr5:88879958-88879977 MsG0580028931.01.T01:intron 35.0%
ATACGATACAAAAACAGCCA+TGG + Chr5:88883507-88883526 None:intergenic 35.0%
ATAGGATCCAAGTGATACAA+AGG - Chr5:88880680-88880699 MsG0580028931.01.T01:intron 35.0%
ATTGAGTATGAAGGATACGT+AGG - Chr5:88880561-88880580 MsG0580028931.01.T01:CDS 35.0%
CAACTAATTTCTACAGCAGT+TGG - Chr5:88882316-88882335 MsG0580028931.01.T01:intron 35.0%
CAACTGCTGTAGAAATTAGT+TGG + Chr5:88882318-88882337 None:intergenic 35.0%
CAATATGTACTAGCATCTTC+AGG + Chr5:88883591-88883610 None:intergenic 35.0%
CAATTATAAGCGGATGAAGA+GGG + Chr5:88881239-88881258 None:intergenic 35.0%
CACGACAATACCATTATAGA+CGG + Chr5:88885026-88885045 None:intergenic 35.0%
CAGAAGACTTCAAATTTACC+CGG + Chr5:88883246-88883265 None:intergenic 35.0%
CGATGGGTACATTGATAAAA+AGG - Chr5:88878464-88878483 MsG0580028931.01.T01:intron 35.0%
CGCAAATGTCACAATATTGT+AGG - Chr5:88883383-88883402 MsG0580028931.01.T02:three_prime_UTR 35.0%
CTAACTTGATTATAGACCTC+CGG + Chr5:88881662-88881681 None:intergenic 35.0%
CTCTATGTCCTTTAATCTCA+TGG - Chr5:88879163-88879182 MsG0580028931.01.T01:CDS 35.0%
GAAGAAATTTGACAGGAAAG+TGG - Chr5:88882388-88882407 MsG0580028931.01.T01:intron 35.0%
GATGTTTCATCTCTTAAACC+AGG - Chr5:88881811-88881830 MsG0580028931.01.T01:intron 35.0%
GATTATTGATGGAGAAGACA+AGG - Chr5:88882433-88882452 MsG0580028931.01.T01:intron 35.0%
GGACTGTAATAAATTAGGTC+AGG + Chr5:88880530-88880549 None:intergenic 35.0%
GGCAAAGGCAAAAAATGATA+TGG - Chr5:88879852-88879871 MsG0580028931.01.T01:intron 35.0%
GGGAATAGCTCCAAATTAAT+TGG - Chr5:88883140-88883159 MsG0580028931.01.T02:three_prime_UTR 35.0%
GTAGAAAATATCAAACCTGC+GGG + Chr5:88882537-88882556 None:intergenic 35.0%
GTATGAGGAATCATGACATT+GGG - Chr5:88879959-88879978 MsG0580028931.01.T01:intron 35.0%
GTCATGTAAGTATAGACGAT+GGG - Chr5:88878448-88878467 MsG0580028931.01.T01:intron 35.0%
GTCTACGGAATATGGTAATT+CGG + Chr5:88884649-88884668 None:intergenic 35.0%
TAAACATTTGTGAGTGGAGT+TGG - Chr5:88878633-88878652 MsG0580028931.01.T01:CDS 35.0%
TAATCAAAGGTTTGGACTTC+AGG + Chr5:88884737-88884756 None:intergenic 35.0%
TACGATACAAAAACAGCCAT+GGG + Chr5:88883506-88883525 None:intergenic 35.0%
TAGAGAAACATAGTGTGTGT+TGG - Chr5:88883084-88883103 MsG0580028931.01.T02:three_prime_UTR 35.0%
TAGGGATGTTAGGAAAACAA+TGG + Chr5:88878905-88878924 None:intergenic 35.0%
TATACTTCTGCCCAATACAA+AGG + Chr5:88882361-88882380 None:intergenic 35.0%
TCAATTATAAGCGGATGAAG+AGG + Chr5:88881240-88881259 None:intergenic 35.0%
TCATTAGAACAGTTGTGCAA+TGG + Chr5:88884612-88884631 None:intergenic 35.0%
TCGAAGAAATTGTACAGGTA+AGG - Chr5:88880775-88880794 MsG0580028931.01.T01:CDS 35.0%
TGATGCTAATGCTTGATTTC+AGG - Chr5:88878071-88878090 MsG0580028931.01.T01:CDS 35.0%
TGATGTCGAAGAAATTGTAC+AGG - Chr5:88880770-88880789 MsG0580028931.01.T01:CDS 35.0%
TGCCAATAAGTAAGAAGACA+GGG - Chr5:88881072-88881091 MsG0580028931.01.T01:CDS 35.0%
TGCTTATTAACCAGTAACTG+AGG - Chr5:88880059-88880078 MsG0580028931.01.T01:intron 35.0%
TGTACTGAGAAACACAACAA+TGG + Chr5:88880745-88880764 None:intergenic 35.0%
TGTCAGTTATATGTGATTCG+AGG + Chr5:88882110-88882129 None:intergenic 35.0%
TTAGGAAATGATGATCCAGA+AGG - Chr5:88880871-88880890 MsG0580028931.01.T01:CDS 35.0%
TTCACTTGTCTCCTAGAAAA+GGG + Chr5:88880189-88880208 None:intergenic 35.0%
TTCTGGATCATCATTTCCTA+AGG + Chr5:88880872-88880891 None:intergenic 35.0%
TTGCAGTGAAGAAATTTGAC+AGG - Chr5:88882381-88882400 MsG0580028931.01.T01:intron 35.0%
TTGCCAATAAGTAAGAAGAC+AGG - Chr5:88881071-88881090 MsG0580028931.01.T01:CDS 35.0%
! ACAAAATGGAACTCAAGTTG+TGG - Chr5:88878341-88878360 MsG0580028931.01.T01:intron 35.0%
! ACTTGAGTTCCATTTTGTAC+CGG + Chr5:88878339-88878358 None:intergenic 35.0%
! AGAACGAGGTGGAATTTTTA+GGG - Chr5:88880945-88880964 MsG0580028931.01.T01:CDS 35.0%
! AGCTCCTGGAAAGATATTTT+TGG + Chr5:88884228-88884247 None:intergenic 35.0%
! AGTTCTTCTGATCTTGTTGT+AGG - Chr5:88878302-88878321 MsG0580028931.01.T01:intron 35.0%
! ATCAAACATCATGTTGGCTA+AGG + Chr5:88883883-88883902 None:intergenic 35.0%
! CAAATTTACCCGGTTTTCTT+GGG + Chr5:88883236-88883255 None:intergenic 35.0%
! GCTCCTGGAAAGATATTTTT+GGG + Chr5:88884227-88884246 None:intergenic 35.0%
! GTAAATTTGAAGTCTTCTGG+AGG - Chr5:88883247-88883266 MsG0580028931.01.T02:three_prime_UTR 35.0%
! TCAAATTTACCCGGTTTTCT+TGG + Chr5:88883237-88883256 None:intergenic 35.0%
! TCTTGAATTTGAGATGCAGA+TGG - Chr5:88882158-88882177 MsG0580028931.01.T01:intron 35.0%
! TCTTTTAAACCAATGGCAAG+TGG - Chr5:88881838-88881857 MsG0580028931.01.T01:intron 35.0%
! TTAGACTGATCCATTTTGCT+TGG + Chr5:88882015-88882034 None:intergenic 35.0%
!! ATCAGCTTTAGAATTACGTG+AGG - Chr5:88879362-88879381 MsG0580028931.01.T01:intron 35.0%
!! GATGTTCTAAGAGTAAAGTG+GGG - Chr5:88882207-88882226 MsG0580028931.01.T01:intron 35.0%
!! GGATGTTCTAAGAGTAAAGT+GGG - Chr5:88882206-88882225 MsG0580028931.01.T01:intron 35.0%
!! TCAGCTTTAGAATTACGTGA+GGG - Chr5:88879363-88879382 MsG0580028931.01.T01:intron 35.0%
!! TGATACAGTTTGAAGTGTTG+TGG - Chr5:88879659-88879678 MsG0580028931.01.T01:intron 35.0%
!! TGGATGTTCTAAGAGTAAAG+TGG - Chr5:88882205-88882224 MsG0580028931.01.T01:intron 35.0%
!! TTCAAATTTTCAGGAGCAGA+AGG + Chr5:88882042-88882061 None:intergenic 35.0%
!! TTGTACTTTCTGAGGCTTAA+TGG + Chr5:88884259-88884278 None:intergenic 35.0%
!! TTTTCAGATTGCAGCTTTGT+CGG - Chr5:88881385-88881404 MsG0580028931.01.T01:intron 35.0%
!!! AGAATTTGGTTTTCCACTGA+GGG - Chr5:88880295-88880314 MsG0580028931.01.T01:intron 35.0%
!!! AGATATGTTGTTGCTTTTGC+TGG - Chr5:88882491-88882510 MsG0580028931.01.T01:CDS 35.0%
!!! ATCCTTTTTGAGACAAGAAG+TGG - Chr5:88880616-88880635 MsG0580028931.01.T01:intron 35.0%
!!! CAACTTCTGAAGTTTTTGGT+GGG + Chr5:88878377-88878396 None:intergenic 35.0%
!!! CTTTTTGTTATTCTGGATGG+TGG - Chr5:88881511-88881530 MsG0580028931.01.T01:intron 35.0%
!!! GATATGTTGTTGCTTTTGCT+GGG - Chr5:88882492-88882511 MsG0580028931.01.T01:CDS 35.0%
!!! GATCTCGCTTTTTGTTATTC+TGG - Chr5:88881504-88881523 MsG0580028931.01.T01:intron 35.0%
!!! TCAACTTCTGAAGTTTTTGG+TGG + Chr5:88878378-88878397 None:intergenic 35.0%
!!! TCCTTTTTGAGACAAGAAGT+GGG - Chr5:88880617-88880636 MsG0580028931.01.T01:intron 35.0%
!!! TCGCTTTTTGTTATTCTGGA+TGG - Chr5:88881508-88881527 MsG0580028931.01.T01:intron 35.0%
!!! TGGCTGTTTTTGTATCGTAT+CGG - Chr5:88883507-88883526 MsG0580028931.01.T02:three_prime_UTR 35.0%
!!! TTACTTTTGAAACTACCTGC+TGG + Chr5:88883860-88883879 None:intergenic 35.0%
AAAAGAGGGTTGAGAATGAG+AGG - Chr5:88879581-88879600 MsG0580028931.01.T01:intron 40.0%
AAAAGCAACAGGGAGTTACA+GGG + Chr5:88878189-88878208 None:intergenic 40.0%
AAGAACTGGATGACTCAGAT+TGG - Chr5:88878487-88878506 MsG0580028931.01.T01:intron 40.0%
AAGATCAGAAATTCAGAGGC+GGG - Chr5:88880483-88880502 MsG0580028931.01.T01:CDS 40.0%
AAGTGATACAAAGGCAAGAG+TGG - Chr5:88880689-88880708 MsG0580028931.01.T01:intron 40.0%
AATACTTCATCCAAAGGGTC+CGG - Chr5:88883998-88884017 MsG0580028931.01.T02:intron 40.0%
AATCCAGTGTGCAAATCACA+TGG + Chr5:88884504-88884523 None:intergenic 40.0%
AATGGCAAGTGGTTCTTGTA+AGG - Chr5:88881849-88881868 MsG0580028931.01.T01:intron 40.0%
ACAACGCAATTTCACAACCA+AGG - Chr5:88884690-88884709 MsG0580028931.01.T02:intron 40.0%
ACACAACTATGCAGTTCAAG+TGG + Chr5:88880367-88880386 None:intergenic 40.0%
ACCTTTGCAGGATGTTCATT+GGG + Chr5:88884121-88884140 None:intergenic 40.0%
ACTCTTGCCTTTGTATCACT+TGG + Chr5:88880690-88880709 None:intergenic 40.0%
AGAACTGGATGACTCAGATT+GGG - Chr5:88878488-88878507 MsG0580028931.01.T01:intron 40.0%
AGAAGCAAAGTCTTAGATGC+TGG - Chr5:88879749-88879768 MsG0580028931.01.T01:intron 40.0%
AGAAGCCAAAGAAAAAGTGG+AGG - Chr5:88879831-88879850 MsG0580028931.01.T01:intron 40.0%
AGAATCAATCTCTAGCCTCT+TGG + Chr5:88884957-88884976 None:intergenic 40.0%
AGAGGAGGTTAAACAAGTAG+CGG - Chr5:88880420-88880439 MsG0580028931.01.T01:intron 40.0%
AGCATTCAACTTTCACCCTT+TGG - Chr5:88884453-88884472 MsG0580028931.01.T02:CDS 40.0%
AGCGAGTTAATTCAACATGG+TGG - Chr5:88883652-88883671 MsG0580028931.01.T02:CDS 40.0%
AGGACGTTGAGTTAGAAACT+AGG - Chr5:88883808-88883827 MsG0580028931.01.T02:intron 40.0%
AGTGATACAAAGGCAAGAGT+GGG - Chr5:88880690-88880709 MsG0580028931.01.T01:intron 40.0%
AGTGGAAAACCAAATTCTGG+TGG + Chr5:88880293-88880312 None:intergenic 40.0%
AGTGTTGTGGAAGGATGAAT+TGG - Chr5:88879672-88879691 MsG0580028931.01.T01:intron 40.0%
AGTTCGTCTATTATCATGGC+AGG - Chr5:88879071-88879090 MsG0580028931.01.T01:intron 40.0%
ATACGTATCTTGGGATACGT+GGG - Chr5:88883531-88883550 MsG0580028931.01.T02:three_prime_UTR 40.0%
ATCGTTGACCGAAATATCCA+AGG - Chr5:88878094-88878113 MsG0580028931.01.T01:CDS 40.0%
ATGACTCAGATTGGGAAGAT+GGG - Chr5:88878496-88878515 MsG0580028931.01.T01:intron 40.0%
ATGGCAAGTGGTTCTTGTAA+GGG - Chr5:88881850-88881869 MsG0580028931.01.T01:intron 40.0%
ATTTCAAAGCTGTCTGCTCT+AGG + Chr5:88879723-88879742 None:intergenic 40.0%
CAAAGAAAAAGTGGAGGCAA+AGG - Chr5:88879837-88879856 MsG0580028931.01.T01:intron 40.0%
CAAGATCAGAAATTCAGAGG+CGG - Chr5:88880482-88880501 MsG0580028931.01.T01:CDS 40.0%
CAATAAGTAAGAAGACAGGG+AGG - Chr5:88881075-88881094 MsG0580028931.01.T01:CDS 40.0%
CACAGCGAGTTAATTCAACA+TGG - Chr5:88883649-88883668 MsG0580028931.01.T02:CDS 40.0%
CACCAACTACATGTTCTCAT+TGG - Chr5:88884585-88884604 MsG0580028931.01.T02:CDS 40.0%
CATTGATAGATTTGTGCTGG+GGG - Chr5:88880980-88880999 MsG0580028931.01.T01:CDS 40.0%
CTCAGTGGAAAACCAAATTC+TGG + Chr5:88880296-88880315 None:intergenic 40.0%
CTCCCTGTCTTCTTACTTAT+TGG + Chr5:88881077-88881096 None:intergenic 40.0%
CTGCTGTAGAAATTAGTTGG+GGG + Chr5:88882315-88882334 None:intergenic 40.0%
CTGTTATGACCAAAGAGAGA+TGG - Chr5:88884071-88884090 MsG0580028931.01.T02:intron 40.0%
CTTCACTTGTCTCCTAGAAA+AGG + Chr5:88880190-88880209 None:intergenic 40.0%
CTTTGGTACTTCAACACCAA+TGG - Chr5:88881876-88881895 MsG0580028931.01.T01:intron 40.0%
GAACGTAAAGACGATACCTT+AGG + Chr5:88884396-88884415 None:intergenic 40.0%
GACCAATGAGAACATGTAGT+TGG + Chr5:88884590-88884609 None:intergenic 40.0%
GATTCTGCAGATGAGAAATG+TGG - Chr5:88878426-88878445 MsG0580028931.01.T01:intron 40.0%
GCAGTTGGATCTATGAAAGT+AGG - Chr5:88882331-88882350 MsG0580028931.01.T01:intron 40.0%
GCGAGTTAATTCAACATGGT+GGG - Chr5:88883653-88883672 MsG0580028931.01.T02:CDS 40.0%
GCTCGTGGAAGATTAATACA+GGG - Chr5:88878758-88878777 MsG0580028931.01.T01:intron 40.0%
GCTGTTGAAGGCTTCAAAAA+TGG - Chr5:88880235-88880254 MsG0580028931.01.T01:intron 40.0%
GGACGTTGAGTTAGAAACTA+GGG - Chr5:88883809-88883828 MsG0580028931.01.T02:intron 40.0%
GGGGAAATGCAATGAAATCA+GGG + Chr5:88884175-88884194 None:intergenic 40.0%
GGTCATGTAAGTATAGACGA+TGG - Chr5:88878447-88878466 MsG0580028931.01.T01:intron 40.0%
GGTGAATGGAATAGTTCCTA+AGG - Chr5:88884377-88884396 MsG0580028931.01.T02:intron 40.0%
GGTTAAGAGAAACTTCCTTC+TGG + Chr5:88880889-88880908 None:intergenic 40.0%
GTCAAACTCACAAACTTCTG+AGG - Chr5:88882071-88882090 MsG0580028931.01.T01:intron 40.0%
GTCAACATGTGAGACATGAA+CGG - Chr5:88880828-88880847 MsG0580028931.01.T01:CDS 40.0%
GTCCTTTAATCTCATGGGTA+TGG - Chr5:88879169-88879188 MsG0580028931.01.T01:CDS 40.0%
GTGTTGTGGAAGGATGAATT+GGG - Chr5:88879673-88879692 MsG0580028931.01.T01:intron 40.0%
GTTCACCTGCAATATCTGAT+GGG - Chr5:88883196-88883215 MsG0580028931.01.T02:three_prime_UTR 40.0%
TAAAAGCAACAGGGAGTTAC+AGG + Chr5:88878190-88878209 None:intergenic 40.0%
TAGAGATACTAGTTCCGATC+AGG - Chr5:88881148-88881167 MsG0580028931.01.T01:intron 40.0%
TATGTGGATGATGCTGTTGA+AGG - Chr5:88880223-88880242 MsG0580028931.01.T01:intron 40.0%
TCACTTGTCTCCTAGAAAAG+GGG + Chr5:88880188-88880207 None:intergenic 40.0%
TCCTAAGGCTACAAAAGTAG+TGG + Chr5:88880857-88880876 None:intergenic 40.0%
TCGTTGACCGAAATATCCAA+GGG - Chr5:88878095-88878114 MsG0580028931.01.T01:CDS 40.0%
TGAAAGAGATGTACCTCTTC+AGG + Chr5:88879393-88879412 None:intergenic 40.0%
TGCTCGTGGAAGATTAATAC+AGG - Chr5:88878757-88878776 MsG0580028931.01.T01:intron 40.0%
TGCTGTAGAAATTAGTTGGG+GGG + Chr5:88882314-88882333 None:intergenic 40.0%
TGTCATAGGATGATCATCCA+CGG + Chr5:88878529-88878548 None:intergenic 40.0%
TGTTACCCATCAGATATTGC+AGG + Chr5:88883204-88883223 None:intergenic 40.0%
TGTTGTGGAAGGATGAATTG+GGG - Chr5:88879674-88879693 MsG0580028931.01.T01:intron 40.0%
TTAACTTTGTTACCACCTGC+AGG - Chr5:88881482-88881501 MsG0580028931.01.T01:intron 40.0%
TTACAAGAACCACTTGCCAT+TGG + Chr5:88881850-88881869 None:intergenic 40.0%
TTATAAAGCTCTTACTCCGG+AGG - Chr5:88881643-88881662 MsG0580028931.01.T01:intron 40.0%
TTCTTGCTCTCGTCTTGATA+TGG + Chr5:88879892-88879911 None:intergenic 40.0%
TTGTGACGATCCTCTTATTC+AGG - Chr5:88878782-88878801 MsG0580028931.01.T01:intron 40.0%
! ATGTGATTTGCACACTGGAT+TGG - Chr5:88884503-88884522 MsG0580028931.01.T02:CDS 40.0%
! ATTGGCTGAACTTGTTCACA+AGG - Chr5:88878715-88878734 MsG0580028931.01.T01:CDS 40.0%
! CGGGTAAATTTGAAGTCTTC+TGG - Chr5:88883244-88883263 MsG0580028931.01.T02:three_prime_UTR 40.0%
! CTTTGTTTCTCCTCAGTTAC+TGG + Chr5:88880072-88880091 None:intergenic 40.0%
! GAAGACTTGGTACATGACAT+TGG - Chr5:88879998-88880017 MsG0580028931.01.T01:intron 40.0%
! GAGAACGAGGTGGAATTTTT+AGG - Chr5:88880944-88880963 MsG0580028931.01.T01:CDS 40.0%
! GAGACAAGTGAAGTGTCAAT+GGG - Chr5:88880197-88880216 MsG0580028931.01.T01:intron 40.0%
! GCTTTGTGACATTTGATAGC+TGG + Chr5:88879131-88879150 None:intergenic 40.0%
! GGATCTCGAAAGGTAGATTT+TGG - Chr5:88884560-88884579 MsG0580028931.01.T02:CDS 40.0%
! GTATTCGATAAGAGCACAGA+AGG - Chr5:88881442-88881461 MsG0580028931.01.T01:intron 40.0%
! TAATGGATCGTTTAAGCTCC+TGG + Chr5:88884242-88884261 None:intergenic 40.0%
! TGTCTCAAAAAGGATGGACT+TGG + Chr5:88880611-88880630 None:intergenic 40.0%
! TGTGATTTGCACACTGGATT+GGG - Chr5:88884504-88884523 MsG0580028931.01.T02:CDS 40.0%
! TTCTAAGAGTAAAGTGGGGT+CGG - Chr5:88882211-88882230 MsG0580028931.01.T01:CDS 40.0%
!! AACGAGGTGGAATTTTTAGG+GGG - Chr5:88880947-88880966 MsG0580028931.01.T01:CDS 40.0%
!! ACAGTTTGAAGTGTTGTGGA+AGG - Chr5:88879663-88879682 MsG0580028931.01.T01:intron 40.0%
!! ACCACTACTTTTGTAGCCTT+AGG - Chr5:88880853-88880872 MsG0580028931.01.T01:CDS 40.0%
!! CCTAGGATACAGTGTCATTT+GGG - Chr5:88883458-88883477 MsG0580028931.01.T02:three_prime_UTR 40.0%
!! GAACGAGGTGGAATTTTTAG+GGG - Chr5:88880946-88880965 MsG0580028931.01.T01:CDS 40.0%
!! GAAGAACTTGATTTTGGCCA+TGG + Chr5:88878290-88878309 None:intergenic 40.0%
!! GAGCTTTAAATCTTACAGCC+AGG - Chr5:88881420-88881439 MsG0580028931.01.T01:intron 40.0%
!! GCAGACAGCTTTGAAATATG+AGG - Chr5:88879726-88879745 MsG0580028931.01.T01:intron 40.0%
!! TGACTGCACTACTGATTCTA+AGG - Chr5:88884299-88884318 MsG0580028931.01.T02:intron 40.0%
!! TTGCTTCTGTAGCACTGATT+TGG + Chr5:88883749-88883768 None:intergenic 40.0%
!! TTGCTTTGTTTACTTGCTCG+TGG - Chr5:88878743-88878762 MsG0580028931.01.T01:intron 40.0%
!! TTTTACATCTAGAACGAGCG+TGG - Chr5:88884854-88884873 MsG0580028931.01.T02:CDS 40.0%
!!! CAGAATTTGGTTTTCCACTG+AGG - Chr5:88880294-88880313 MsG0580028931.01.T01:intron 40.0%
!!! CTTTGCCTCCACTTTTTCTT+TGG + Chr5:88879839-88879858 None:intergenic 40.0%
!!! GAAGTTTTTGGTGGGACAAT+CGG + Chr5:88878369-88878388 None:intergenic 40.0%
!!! GAATTTGGTTTTCCACTGAG+GGG - Chr5:88880296-88880315 MsG0580028931.01.T01:intron 40.0%
!!! GGCTGTTTTTGTATCGTATC+GGG - Chr5:88883508-88883527 MsG0580028931.01.T02:three_prime_UTR 40.0%
!!! TTTTGAAACTACCTGCTGGT+TGG + Chr5:88883856-88883875 None:intergenic 40.0%
AAAACCCGACCCAAGAAAAC+CGG - Chr5:88883224-88883243 MsG0580028931.01.T02:three_prime_UTR 45.0%
AAAGTCACCGCACTTTGCTT+TGG - Chr5:88879338-88879357 MsG0580028931.01.T01:CDS 45.0%
AAATCCCAACACAACACCGA+AGG - Chr5:88877955-88877974 MsG0580028931.01.T01:CDS 45.0%
AACAAAAAGCGAGATCCTGC+AGG + Chr5:88881500-88881519 None:intergenic 45.0%
AACCTTAAGTGCACTGTACC+TGG + Chr5:88884914-88884933 None:intergenic 45.0%
ACACAAGTCCTAGGGTAAAC+AGG + Chr5:88884046-88884065 None:intergenic 45.0%
ACAGTTTGCACACAAGTCCT+AGG + Chr5:88884055-88884074 None:intergenic 45.0%
ACCATATTCCGTAGACAACG+AGG - Chr5:88884653-88884672 MsG0580028931.01.T02:CDS 45.0%
ACCATTGAATCTTCCTCACG+CGG - Chr5:88884356-88884375 MsG0580028931.01.T02:intron 45.0%
ACCCAATGAACATCCTGCAA+AGG - Chr5:88884117-88884136 MsG0580028931.01.T02:intron 45.0%
ACCTCGTTGTCTACGGAATA+TGG + Chr5:88884657-88884676 None:intergenic 45.0%
ACCTGAACAAAACCCAGAAC+CGG + Chr5:88884020-88884039 None:intergenic 45.0%
ACTGATTATCTCTAGCCCCA+TGG - Chr5:88880584-88880603 MsG0580028931.01.T01:CDS 45.0%
AGAAGACAAGGTTGAAGCCA+TGG - Chr5:88882445-88882464 MsG0580028931.01.T01:intron 45.0%
AGAGAGAGAGAGAGAGAGTA+TGG - Chr5:88879624-88879643 MsG0580028931.01.T01:intron 45.0%
AGATCAGAAATTCAGAGGCG+GGG - Chr5:88880484-88880503 MsG0580028931.01.T01:CDS 45.0%
AGGATATGCCAGCGATACAT+GGG - Chr5:88883430-88883449 MsG0580028931.01.T02:three_prime_UTR 45.0%
AGTTGTGTTGCAGGTTCCAT+TGG - Chr5:88880379-88880398 MsG0580028931.01.T01:intron 45.0%
ATCCAATCTTGAGAACGAGG+TGG - Chr5:88880934-88880953 MsG0580028931.01.T01:CDS 45.0%
CAACCAGATTAGACCTTTGC+AGG + Chr5:88884133-88884152 None:intergenic 45.0%
CACAAGTCCTAGGGTAAACA+GGG + Chr5:88884045-88884064 None:intergenic 45.0%
CACAGCACCCTTGGATATTT+CGG + Chr5:88878105-88878124 None:intergenic 45.0%
CAGGTAAGGCAGCATTTACA+AGG - Chr5:88880789-88880808 MsG0580028931.01.T01:CDS 45.0%
CAGTTTGCACACAAGTCCTA+GGG + Chr5:88884054-88884073 None:intergenic 45.0%
CATCCTGCAAAGGTCTAATC+TGG - Chr5:88884127-88884146 MsG0580028931.01.T02:intron 45.0%
CATTATAGACGGGATGTGCT+CGG + Chr5:88885015-88885034 None:intergenic 45.0%
CCAAAGCGTAAAAGAGACGT+GGG - Chr5:88880459-88880478 MsG0580028931.01.T01:intron 45.0%
CCACTGAGAAACTTAGAGTC+TGG - Chr5:88883690-88883709 MsG0580028931.01.T02:intron 45.0%
CCAGACTCTAAGTTTCTCAG+TGG + Chr5:88883693-88883712 None:intergenic 45.0%
CCCAAATGACACTGTATCCT+AGG + Chr5:88883461-88883480 None:intergenic 45.0%
CGTATCGGGATACGTATCTT+GGG - Chr5:88883522-88883541 MsG0580028931.01.T02:three_prime_UTR 45.0%
CTCTTCTTGTATAGCTGGAG+TGG + Chr5:88880910-88880929 None:intergenic 45.0%
CTGATTATCTCTAGCCCCAT+GGG - Chr5:88880585-88880604 MsG0580028931.01.T01:CDS 45.0%
CTGTGCTCTTATCGAATACC+TGG + Chr5:88881441-88881460 None:intergenic 45.0%
GAACTGCATAGTTGTGTTGC+AGG - Chr5:88880370-88880389 MsG0580028931.01.T01:intron 45.0%
GACCTTTGCAGGATGTTCAT+TGG + Chr5:88884122-88884141 None:intergenic 45.0%
GAGTTTGAGCCGGTACAAAA+TGG - Chr5:88878327-88878346 MsG0580028931.01.T01:intron 45.0%
GATACGTATCTTGGGATACG+TGG - Chr5:88883530-88883549 MsG0580028931.01.T02:three_prime_UTR 45.0%
GATGACTCAGATTGGGAAGA+TGG - Chr5:88878495-88878514 MsG0580028931.01.T01:intron 45.0%
GCCCACTTCTTGTCTCAAAA+AGG + Chr5:88880621-88880640 None:intergenic 45.0%
GCGTTTCAGTTGTAGAAACC+AGG + Chr5:88883366-88883385 None:intergenic 45.0%
GCTCTTTCTGTTACAGCAGT+TGG - Chr5:88882185-88882204 MsG0580028931.01.T01:intron 45.0%
GGAAGTCGTAAAGGAAGAGA+AGG - Chr5:88883105-88883124 MsG0580028931.01.T02:three_prime_UTR 45.0%
GGGCAAGATCAGAAATTCAG+AGG - Chr5:88880479-88880498 MsG0580028931.01.T01:CDS 45.0%
GGGGGAAATGCAATGAAATC+AGG + Chr5:88884176-88884195 None:intergenic 45.0%
GGTTCACCTGCAATATCTGA+TGG - Chr5:88883195-88883214 MsG0580028931.01.T02:three_prime_UTR 45.0%
GGTTCTTGTAAGGGGATCTT+TGG - Chr5:88881859-88881878 MsG0580028931.01.T01:intron 45.0%
GTAAAGGAAGAGAAGGTGAG+TGG - Chr5:88883112-88883131 MsG0580028931.01.T02:three_prime_UTR 45.0%
GTGTGTGTTGGAAGTCGTAA+AGG - Chr5:88883096-88883115 MsG0580028931.01.T02:three_prime_UTR 45.0%
GTTCAAGGACATACTGCTAG+AGG - Chr5:88885054-88885073 MsG0580028931.01.T02:CDS 45.0%
GTTCAGCATGAATGCAGTGA+TGG - Chr5:88882568-88882587 MsG0580028931.01.T01:CDS 45.0%
GTTTCACTTGTAGCCCTTCT+CGG + Chr5:88884099-88884118 None:intergenic 45.0%
GTTTCTTTGCAGACGACTCA+GGG + Chr5:88878569-88878588 None:intergenic 45.0%
TAGGATATGCCAGCGATACA+TGG - Chr5:88883429-88883448 MsG0580028931.01.T02:three_prime_UTR 45.0%
TCCTACAAGGAGCTCTATTG+AGG - Chr5:88883788-88883807 MsG0580028931.01.T02:intron 45.0%
TCCTCAATAGAGCTCCTTGT+AGG + Chr5:88883792-88883811 None:intergenic 45.0%
TCGCTCTCTTCTTGTATAGC+TGG + Chr5:88880915-88880934 None:intergenic 45.0%
TCGTATCGGGATACGTATCT+TGG - Chr5:88883521-88883540 MsG0580028931.01.T02:three_prime_UTR 45.0%
TCTAAGAGTAAAGTGGGGTC+GGG - Chr5:88882212-88882231 MsG0580028931.01.T01:CDS 45.0%
TCTGAGAAATGTCTTCCACC+AGG - Chr5:88884893-88884912 MsG0580028931.01.T02:intron 45.0%
TGGCAAGTGGTTCTTGTAAG+GGG - Chr5:88881851-88881870 MsG0580028931.01.T01:intron 45.0%
TGTAGAAATTAGTTGGGGGG+AGG + Chr5:88882311-88882330 None:intergenic 45.0%
TGTTTCGTATTGGGCAGTCT+TGG - Chr5:88879213-88879232 MsG0580028931.01.T01:CDS 45.0%
TGTTTCTTTGCAGACGACTC+AGG + Chr5:88878570-88878589 None:intergenic 45.0%
TTAGGGATCAGTCATGGAAC+CGG + Chr5:88883288-88883307 None:intergenic 45.0%
TTAGTTCATAGTTGGGGGCT+TGG - Chr5:88879523-88879542 MsG0580028931.01.T01:intron 45.0%
TTCCACCTCGTTCTCAAGAT+TGG + Chr5:88880939-88880958 None:intergenic 45.0%
TTTCTTTGCAGACGACTCAG+GGG + Chr5:88878568-88878587 None:intergenic 45.0%
! AACTTAGAGTCTGGAGCAAC+TGG - Chr5:88883699-88883718 MsG0580028931.01.T02:intron 45.0%
! AAGAGAAGGTGAGTGGCTTT+TGG - Chr5:88883119-88883138 MsG0580028931.01.T02:three_prime_UTR 45.0%
! AGAGAAGGTGAGTGGCTTTT+GGG - Chr5:88883120-88883139 MsG0580028931.01.T02:three_prime_UTR 45.0%
! GATTGATTCTGCACCTGCTA+TGG - Chr5:88884967-88884986 MsG0580028931.01.T02:intron 45.0%
! GCCTAGGATACAGTGTCATT+TGG - Chr5:88883457-88883476 MsG0580028931.01.T02:three_prime_UTR 45.0%
! GGAGACAAGTGAAGTGTCAA+TGG - Chr5:88880196-88880215 MsG0580028931.01.T01:intron 45.0%
! GGTTTTTGTAGGCCTGCAAA+GGG + Chr5:88883939-88883958 None:intergenic 45.0%
! GTTGTAGGTTGAGTTTGAGC+CGG - Chr5:88878317-88878336 MsG0580028931.01.T01:intron 45.0%
! TGGTTTTTGTAGGCCTGCAA+AGG + Chr5:88883940-88883959 None:intergenic 45.0%
! TTTACCCGGTTTTCTTGGGT+CGG + Chr5:88883232-88883251 None:intergenic 45.0%
!! ACGAGGTGGAATTTTTAGGG+GGG - Chr5:88880948-88880967 MsG0580028931.01.T01:CDS 45.0%
!! GAAATATCCAAGGGTGCTGT+GGG - Chr5:88878104-88878123 MsG0580028931.01.T01:CDS 45.0%
!!! TTGTTGCTTTTGCTGGGCAT+GGG - Chr5:88882498-88882517 MsG0580028931.01.T01:CDS 45.0%
AAAAAGCGAGATCCTGCAGG+TGG + Chr5:88881497-88881516 None:intergenic 50.0%
AAACCCGACCCAAGAAAACC+GGG - Chr5:88883225-88883244 MsG0580028931.01.T02:three_prime_UTR 50.0%
AAACCTGCGGGTCACATCTT+TGG + Chr5:88882525-88882544 None:intergenic 50.0%
AAAGAGAGATGGCTCCGAGA+AGG - Chr5:88884082-88884101 MsG0580028931.01.T02:intron 50.0%
AAGAGAGATGGCTCCGAGAA+GGG - Chr5:88884083-88884102 MsG0580028931.01.T02:intron 50.0%
AATCTTCCTCACGCGGTGAA+TGG - Chr5:88884363-88884382 MsG0580028931.01.T02:intron 50.0%
ACCGCGTGAGGAAGATTCAA+TGG + Chr5:88884360-88884379 None:intergenic 50.0%
ACGCACTGCACCAAGCAAAA+TGG - Chr5:88882002-88882021 MsG0580028931.01.T01:intron 50.0%
ACTATTCCATTCACCGCGTG+AGG + Chr5:88884372-88884391 None:intergenic 50.0%
ACTCCCAGCGACAACAAAAC+TGG - Chr5:88880325-88880344 MsG0580028931.01.T01:intron 50.0%
AGAACCAGAAACGGTCTGGA+AGG - Chr5:88880259-88880278 MsG0580028931.01.T01:intron 50.0%
CACAACAATGGCAAGACGAC+AGG + Chr5:88880733-88880752 None:intergenic 50.0%
CACCAGGTACAGTGCACTTA+AGG - Chr5:88884909-88884928 MsG0580028931.01.T02:intron 50.0%
CCTTGTCTTCAGCAGAAGCT+CGG + Chr5:88878599-88878618 None:intergenic 50.0%
CGAGCACATCCCGTCTATAA+TGG - Chr5:88885013-88885032 MsG0580028931.01.T02:intron 50.0%
CTACGTCGTGCTAACAAAGG+TGG - Chr5:88878134-88878153 MsG0580028931.01.T01:intron 50.0%
CTCCCAGCGACAACAAAACT+GGG - Chr5:88880326-88880345 MsG0580028931.01.T01:intron 50.0%
CTGCTACGTCGTGCTAACAA+AGG - Chr5:88878131-88878150 MsG0580028931.01.T01:intron 50.0%
CTTAAGTGCACTGTACCTGG+TGG + Chr5:88884911-88884930 None:intergenic 50.0%
GAAATCAGAGAAGCAGAGCG+AGG - Chr5:88880114-88880133 MsG0580028931.01.T01:intron 50.0%
GAACCAGAAACGGTCTGGAA+GGG - Chr5:88880260-88880279 MsG0580028931.01.T01:intron 50.0%
GATTCTGCACCTGCTATGGT+TGG - Chr5:88884971-88884990 MsG0580028931.01.T02:intron 50.0%
GCCAAAGCGTAAAAGAGACG+TGG - Chr5:88880458-88880477 MsG0580028931.01.T01:intron 50.0%
GCGATCCAATCTTGAGAACG+AGG - Chr5:88880931-88880950 MsG0580028931.01.T01:CDS 50.0%
GCGCATATTCTGTTGCCAAG+AGG - Chr5:88884939-88884958 MsG0580028931.01.T02:intron 50.0%
GCTGATGCCAAAGCAAAGTG+CGG + Chr5:88879348-88879367 None:intergenic 50.0%
GGACATACGCCACCAGAATT+TGG - Chr5:88880281-88880300 MsG0580028931.01.T01:intron 50.0%
TACCGCAACCTCGTTGTCTA+CGG + Chr5:88884664-88884683 None:intergenic 50.0%
TCCCAGCGACAACAAAACTG+GGG - Chr5:88880327-88880346 MsG0580028931.01.T01:intron 50.0%
TCGTATTGGGCAGTCTTGGA+TGG - Chr5:88879217-88879236 MsG0580028931.01.T01:CDS 50.0%
TGGTAGAACCAGAAACGGTC+TGG - Chr5:88880255-88880274 MsG0580028931.01.T01:intron 50.0%
TGTCGTGTGTGCTGAGTTCA+AGG - Chr5:88885039-88885058 MsG0580028931.01.T02:CDS 50.0%
TGTTCTGCATGCAGCAACCA+TGG + Chr5:88882465-88882484 None:intergenic 50.0%
TTCCGTAGACAACGAGGTTG+CGG - Chr5:88884659-88884678 MsG0580028931.01.T02:intron 50.0%
TTCTCGGAGCCATCTCTCTT+TGG + Chr5:88884083-88884102 None:intergenic 50.0%
TTTCACGACTCTCCCTTTGC+AGG - Chr5:88883924-88883943 MsG0580028931.01.T02:CDS 50.0%
! AAAAGGATGGACTTGGCCCA+TGG + Chr5:88880604-88880623 None:intergenic 50.0%
! AAAGGATGGACTTGGCCCAT+GGG + Chr5:88880603-88880622 None:intergenic 50.0%
! CCCACGTCTCTTTTACGCTT+TGG + Chr5:88880462-88880481 None:intergenic 50.0%
! GAAACTACCTGCTGGTTGGT+TGG + Chr5:88883852-88883871 None:intergenic 50.0%
! GCACCATGTGATTTGCACAC+TGG - Chr5:88884498-88884517 MsG0580028931.01.T02:CDS 50.0%
! GTAGCGGAGTCACAGATTCA+AGG - Chr5:88880436-88880455 MsG0580028931.01.T01:intron 50.0%
! TCAGATTGCAGCTTTGTCGG+TGG - Chr5:88881388-88881407 MsG0580028931.01.T01:intron 50.0%
! TTACCCGGTTTTCTTGGGTC+GGG + Chr5:88883231-88883250 None:intergenic 50.0%
! TTAGAGTCTGGAGCAACTGG+AGG - Chr5:88883702-88883721 MsG0580028931.01.T02:intron 50.0%
!! AGTTAGGTATTGGGGCTGTC+AGG - Chr5:88881021-88881040 MsG0580028931.01.T01:CDS 50.0%
!! CGAAATATCCAAGGGTGCTG+TGG - Chr5:88878103-88878122 MsG0580028931.01.T01:CDS 50.0%
!!! GTTGTTGCTTTTGCTGGGCA+TGG - Chr5:88882497-88882516 MsG0580028931.01.T01:CDS 50.0%
!!! TCCCCAGTTTTGTTGTCGCT+GGG + Chr5:88880331-88880350 None:intergenic 50.0%
!!! TCCGGTTCTGGGTTTTGTTC+AGG - Chr5:88884016-88884035 MsG0580028931.01.T02:intron 50.0%
!!! TGTTGCTTTTGCTGGGCATG+GGG - Chr5:88882499-88882518 MsG0580028931.01.T01:CDS 50.0%
AAACCCAGAACCGGACCCTT+TGG + Chr5:88884011-88884030 None:intergenic 55.0%
ACCGTGATACGTATCGCCCA+TGG - Chr5:88883487-88883506 MsG0580028931.01.T02:three_prime_UTR 55.0%
ACGTGAGGGTAGTCCTGAAG+AGG - Chr5:88879377-88879396 MsG0580028931.01.T01:intron 55.0%
AGCAGAGCGAGGAACAGAAG+TGG - Chr5:88880125-88880144 MsG0580028931.01.T01:intron 55.0%
AGCGTGGTCAAGTGGATGTC+TGG - Chr5:88884870-88884889 MsG0580028931.01.T02:CDS 55.0%
AGGCGTATCCCATGTATCGC+TGG + Chr5:88883441-88883460 None:intergenic 55.0%
CACTGCTCACATGACAGAGG+AGG - Chr5:88880405-88880424 MsG0580028931.01.T01:intron 55.0%
CAGGTCACCCTGTTTACCCT+AGG - Chr5:88884035-88884054 MsG0580028931.01.T02:intron 55.0%
CATCCAAAGGGTCCGGTTCT+GGG - Chr5:88884005-88884024 MsG0580028931.01.T02:intron 55.0%
CATGTGAGCAGTGTCGCCAA+TGG + Chr5:88880398-88880417 None:intergenic 55.0%
CCCAACACAACACCGAAGGT+GGG - Chr5:88877959-88877978 MsG0580028931.01.T01:CDS 55.0%
CCGAGCTTCTGCTGAAGACA+AGG - Chr5:88878596-88878615 MsG0580028931.01.T01:intron 55.0%
CGACACTGCTCACATGACAG+AGG - Chr5:88880402-88880421 MsG0580028931.01.T01:intron 55.0%
CGGGGTCAGTTTGTCTCGTA+AGG - Chr5:88880502-88880521 MsG0580028931.01.T01:CDS 55.0%
CTAGAACGAGCGTGGTCAAG+TGG - Chr5:88884862-88884881 MsG0580028931.01.T02:CDS 55.0%
CTCGAAGCACGTGAGTGAAG+AGG - Chr5:88879927-88879946 MsG0580028931.01.T01:intron 55.0%
CTTCACCCTGGCATGAGCTA+CGG + Chr5:88880154-88880173 None:intergenic 55.0%
GAGGGTCATACAAACCCGAC+CGG - Chr5:88883266-88883285 MsG0580028931.01.T02:three_prime_UTR 55.0%
GATCAGTCATGGAACCGGTC+GGG + Chr5:88883283-88883302 None:intergenic 55.0%
GCCATGGGCGATACGTATCA+CGG + Chr5:88883491-88883510 None:intergenic 55.0%
GCGATACATGGGATACGCCT+AGG - Chr5:88883441-88883460 MsG0580028931.01.T02:three_prime_UTR 55.0%
GGATCAGTCATGGAACCGGT+CGG + Chr5:88883284-88883303 None:intergenic 55.0%
GGTTACCGTAGCTCATGCCA+GGG - Chr5:88880146-88880165 MsG0580028931.01.T01:intron 55.0%
GTAGCTCATGCCAGGGTGAA+GGG - Chr5:88880153-88880172 MsG0580028931.01.T01:intron 55.0%
TAGCTCATGCCAGGGTGAAG+GGG - Chr5:88880154-88880173 MsG0580028931.01.T01:intron 55.0%
TCATCCAAAGGGTCCGGTTC+TGG - Chr5:88884004-88884023 MsG0580028931.01.T02:intron 55.0%
TCCCAACACAACACCGAAGG+TGG - Chr5:88877958-88877977 MsG0580028931.01.T01:CDS 55.0%
TGGTTACCGTAGCTCATGCC+AGG - Chr5:88880145-88880164 MsG0580028931.01.T01:intron 55.0%
TGTCCCTTCCAGACCGTTTC+TGG + Chr5:88880266-88880285 None:intergenic 55.0%
! AAGGATGGACTTGGCCCATG+GGG + Chr5:88880602-88880621 None:intergenic 55.0%
! ACCTGCTGGTTGGTTGGAAG+AGG + Chr5:88883846-88883865 None:intergenic 55.0%
! CAGTTTTCCCACAGCACCCT+TGG + Chr5:88878114-88878133 None:intergenic 55.0%
! GGTATTGGGGCTGTCAGGAT+GGG - Chr5:88881026-88881045 MsG0580028931.01.T01:CDS 55.0%
!! AGGTATTGGGGCTGTCAGGA+TGG - Chr5:88881025-88881044 MsG0580028931.01.T01:CDS 55.0%
!! CCCACCTTCGGTGTTGTGTT+GGG + Chr5:88877962-88877981 None:intergenic 55.0%
!! TCCCACCTTCGGTGTTGTGT+TGG + Chr5:88877963-88877982 None:intergenic 55.0%
!!! GTCCCCAGTTTTGTTGTCGC+TGG + Chr5:88880332-88880351 None:intergenic 55.0%
CAGGTCAGATTGCACGACCC+AGG + Chr5:88883347-88883366 None:intergenic 60.0%
CGTAGCTCATGCCAGGGTGA+AGG - Chr5:88880152-88880171 MsG0580028931.01.T01:intron 60.0%
CTGGGTCGTGCAATCTGACC+TGG - Chr5:88883345-88883364 MsG0580028931.01.T02:three_prime_UTR 60.0%
GATAGCTGGAGCAAGTGCGC+TGG + Chr5:88879117-88879136 None:intergenic 60.0%
GCCTCTTCCAACCAACCAGC+AGG - Chr5:88883842-88883861 MsG0580028931.01.T02:CDS 60.0%
GGAAGATGGGACAGTTGCCG+TGG - Chr5:88878509-88878528 MsG0580028931.01.T01:intron 60.0%
GGGAGTGACAATCCCCTCAG+TGG + Chr5:88880311-88880330 None:intergenic 60.0%
TCATGCCAGGGTGAAGGGGT+GGG - Chr5:88880158-88880177 MsG0580028931.01.T01:intron 60.0%
TGCTGCGAGTCCGCAACGAT+CGG - Chr5:88879697-88879716 MsG0580028931.01.T01:intron 60.0%
! CTGCTCTAGGCCGATCGTTG+CGG + Chr5:88879710-88879729 None:intergenic 60.0%
! GGTGGGGGAACCCCTTTTCT+AGG - Chr5:88880175-88880194 MsG0580028931.01.T01:intron 60.0%
! GTCTGGAGCAACTGGAGGAG+TGG - Chr5:88883707-88883726 MsG0580028931.01.T02:intron 60.0%
ATGCCAGGGTGAAGGGGTGG+GGG - Chr5:88880160-88880179 MsG0580028931.01.T01:intron 65.0%
CATGCCAGGGTGAAGGGGTG+GGG - Chr5:88880159-88880178 MsG0580028931.01.T01:intron 65.0%
CTCATGCCAGGGTGAAGGGG+TGG - Chr5:88880157-88880176 MsG0580028931.01.T01:intron 65.0%
GGGCCAAAGATGTGACCCGC+AGG - Chr5:88882519-88882538 MsG0580028931.01.T01:CDS 65.0%
GTTCCCCCACCCCTTCACCC+TGG + Chr5:88880166-88880185 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 88877901 88885099 88877901 ID=MsG0580028931.01;Name=MsG0580028931.01
Chr5 mRNA 88877901 88882785 88877901 ID=MsG0580028931.01.T01;Parent=MsG0580028931.01;Name=MsG0580028931.01.T01;_AED=0.37;_eAED=0.50;_QI=0|0.3|0.09|1|0.7|0.54|11|0|572
Chr5 exon 88882698 88882785 88882698 ID=MsG0580028931.01.T01:exon:17448;Parent=MsG0580028931.01.T01
Chr5 exon 88882482 88882608 88882482 ID=MsG0580028931.01.T01:exon:17447;Parent=MsG0580028931.01.T01
Chr5 exon 88882209 88882239 88882209 ID=MsG0580028931.01.T01:exon:17446;Parent=MsG0580028931.01.T01
Chr5 exon 88881537 88881608 88881537 ID=MsG0580028931.01.T01:exon:17445;Parent=MsG0580028931.01.T01
Chr5 exon 88881273 88881359 88881273 ID=MsG0580028931.01.T01:exon:17444;Parent=MsG0580028931.01.T01
Chr5 exon 88880767 88881129 88880767 ID=MsG0580028931.01.T01:exon:17443;Parent=MsG0580028931.01.T01
Chr5 exon 88880460 88880626 88880460 ID=MsG0580028931.01.T01:exon:17442;Parent=MsG0580028931.01.T01
Chr5 exon 88879088 88879380 88879088 ID=MsG0580028931.01.T01:exon:17441;Parent=MsG0580028931.01.T01
Chr5 exon 88878862 88878962 88878862 ID=MsG0580028931.01.T01:exon:17440;Parent=MsG0580028931.01.T01
Chr5 exon 88878602 88878757 88878602 ID=MsG0580028931.01.T01:exon:17439;Parent=MsG0580028931.01.T01
Chr5 exon 88877901 88878134 88877901 ID=MsG0580028931.01.T01:exon:17438;Parent=MsG0580028931.01.T01
Chr5 CDS 88882698 88882785 88882698 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88882482 88882608 88882482 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88882209 88882239 88882209 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88881537 88881608 88881537 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88881273 88881359 88881273 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88880767 88881129 88880767 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88880460 88880626 88880460 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88879088 88879380 88879088 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88878862 88878962 88878862 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88878602 88878757 88878602 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 CDS 88877901 88878134 88877901 ID=MsG0580028931.01.T01:cds;Parent=MsG0580028931.01.T01
Chr5 mRNA 88879999 88885099 88879999 ID=MsG0580028931.01.T02;Parent=MsG0580028931.01;Name=MsG0580028931.01.T02;_AED=0.19;_eAED=0.21;_QI=0|0.6|0.5|1|0.4|0.66|6|3585|257
Chr5 exon 88879999 88883703 88879999 ID=MsG0580028931.01.T02:exon:17454;Parent=MsG0580028931.01.T02
Chr5 exon 88883810 88883958 88883810 ID=MsG0580028931.01.T02:exon:17453;Parent=MsG0580028931.01.T02
Chr5 exon 88884239 88884287 88884239 ID=MsG0580028931.01.T02:exon:17452;Parent=MsG0580028931.01.T02
Chr5 exon 88884383 88884676 88884383 ID=MsG0580028931.01.T02:exon:17451;Parent=MsG0580028931.01.T02
Chr5 exon 88884822 88884907 88884822 ID=MsG0580028931.01.T02:exon:17450;Parent=MsG0580028931.01.T02
Chr5 exon 88885024 88885099 88885024 ID=MsG0580028931.01.T02:exon:17449;Parent=MsG0580028931.01.T02
Chr5 CDS 88885024 88885099 88885024 ID=MsG0580028931.01.T02:cds;Parent=MsG0580028931.01.T02
Chr5 CDS 88884822 88884907 88884822 ID=MsG0580028931.01.T02:cds;Parent=MsG0580028931.01.T02
Chr5 CDS 88884383 88884676 88884383 ID=MsG0580028931.01.T02:cds;Parent=MsG0580028931.01.T02
Chr5 CDS 88884239 88884287 88884239 ID=MsG0580028931.01.T02:cds;Parent=MsG0580028931.01.T02
Chr5 CDS 88883810 88883958 88883810 ID=MsG0580028931.01.T02:cds;Parent=MsG0580028931.01.T02
Chr5 CDS 88883584 88883703 88883584 ID=MsG0580028931.01.T02:cds;Parent=MsG0580028931.01.T02
Chr5 three_prime_UTR 88879999 88883583 88879999 ID=MsG0580028931.01.T02:three_prime_utr;Parent=MsG0580028931.01.T02
Gene Sequence

>MsG0580028931.01.T01

ATGGGAATTATGTGGATGATGCTGTTGAAGGCTTCAAAAATGGTAGAACCAGAAACGGTCTGGAAGGGACATACGCCACCAGAATTTGGTTCCATTGGCGACACTGCTCACATGACAGAGGAGGTTAAACAAGTAGCGGAGTCACAGATTCAAGGCCAAAGCGTAAAAGAGACGTGGGCAAGATCAGAAATTCAGAGGCGGGGTCAGTTTGTCTCTACAGTTGATGATGTCGAAGAAATTGTACAGATTGCAGCTTTGTCGGTGGCATTATTTAGAGCTTTAAATCTTACAGCCAGGTATTCGATAAGAGCACAGAAGAATTATAAAGCTCTTACTCCGGAGGTCTATAATCAAGTTAGAAACATAGTTTTGATTAAGAAATTATATAAATATGTCTACTATAAGGGGATCTTTGGTACTTCAACACCAATGGTATCTAAGCAAATGTTGGATTTTAAGTCGCCTAAAAAATCATTGTCTTATGAAAGAGAGAAACTATGTGAAAGCTCTCTTGGTCATTCACAGAAAAGTAAGAAACGCACTGCACCAAGCAAAATGGATCAGTCTAAAGATCCTTCTGCTCCTGAAAATTTGAATCATAGTGTGTCAAACTCACAAACTTCTGAGGCACAAGATAATAACCTCGAATCACATATAACTGACAAATCTCATAAATTAAAGAGGAAAGGGGATCTTGAATTTGAGATGCAGATGGAAATGCTCTTTCTGTTACAGCAGTTGGATGTTCTAAGAGTAAAGTGGGGTCGGAAGTATATTGCAGTGAAGAAATTTGACAGGAAAGTGGGTGCATATCGATGCTGTGAATTGATTATTGATGGAGAAGACAAGGTTGAAGCCATGGTTGCTGCATGCAGAACATCTCTGAGATATGTTGTTGCTTTTGCTGGGCATGGGGCCAAAGATGTGACCCGCAGGTACTGTATGAAGTGGTACAAGATAGCATCACAGCGAGTTAATTCAACATGGTGGGAATCAGTGTTAGCACCACTGAGAAACTTAGAGTCTGGAGCAACTGGAGGAGTGGTTCATTTGAGAACAAACCAAATCAGTGCTACAGAAGCAAACATGAATGATTCTTTTGTTCCTACAAGGAGCTCTATTGAGGACGTTGAGTTAGAAACTAGGGCATTAACTGAGCCTCTTCCAACCAACCAGCAGGTAGTTTCAAAAGTAACCTTAGCCAACATGATGTTTGATATTGTATATAGTCACCCTGTTTACCCTAGGACTTGTGTGCAAACTGTTATGACCAAAGAGAGATGGCTCCGAGAAGGGCTACAAGTGAAACCCAATGAACATCCTGCAAAGGAGCTTAAACGATCCATTAAGCCTCAGAAAGTACAAGATTTTGAAGCTGATGACTATGACTGCACTACTGATTCTAAGGAAAATATTAAACTTTATGGGAAGTGGCAACTTGAACCATTGAATCTTCCTCACGCGGTGAATGGAATAGTTCCTAAGAACGAGCGTGGTCAAGTGGATGTCTGGTCTGAGAAATGTCTTCCACCAGGTACAGTGCACTTAAGGTTTCGAAGCGCATATTCTGTTGCCAAGAGGCTAGAGATTGATTCTGCACCTGCTATGGTTGGTTTTGAATTTAAAAATGGCCGAGCACATCCCGTCTATAATGGTATTGTCGTGTGTGCTGAGTTCAAGGACATACTGCTAGAGGTATTTCTTTTTCCCGATGAATAG

>MsG0580028931.01.T02

ATGCCGGTATATTGTTTTTGGCTGTTTGCTGTCAAATTTGCAGAAGATGAAACAAAATCCCAACACAACACCGAAGGATCGTTGACCGAAATATCCAAGGGTGCTGTGGGAAAACTGCTACGTCGTGCTAACAAAGGTGGCACTTCTAAGAAAAAGACAACGGTTGAGTTTGAGCCGGTACAAAATGGAACTCAAGTTGTGGAACCGATTGTCCCACCAAAAACTTCAGAAGTTGAACATTGTAGTAGAAATTCTATTGGAAAGGATTCTGCAGATGAGAAATGTGGTCATGTAAGTATAGACGATGGGTACATTGATAAAAAGGAAGAACTGGATGACTCAGATTGGGAAGATGGGACAGTTGCCGTGGATGATCATCCTATGACAATAGAATTGAATGTAACCCCTGAGTCGTCTGCAAAGAAACAAATACGCCGAGCTTCTGCTGAAGACAAGGAATTGGCTGAACTTGTTCACAAGGTTCATTTGCTTTGTTTACTTGCTCACTCTGTTTTTATCTTTTTGATTTCACGAAGTTCGTCTATTATCATGGCAGGCTTCTCTGCTTTCTCTACTTCCAGCGCACTTGCTCCAGCTATCAAATGTCACAAAGCTTACTTCAAAATCTCTATGTCCTTTAATCTCATGGGTATGTTCCATGAAAATTTCCATGCCAAAAACTATACAAATGGTGAAAAGTCACCGCACTTTGCTTTGGCATCAGCTTTAGAATTACGTGAGGGTAGTCCTGAAGAGGTACATCTCTTTCAATAG
Protein sequence

>MsG0580028931.01.T01

MGIMWMMLLKASKMVEPETVWKGHTPPEFGSIGDTAHMTEEVKQVAESQIQGQSVKETWARSEIQRRGQFVSTVDDVEEIVQIAALSVALFRALNLTARYSIRAQKNYKALTPEVYNQVRNIVLIKKLYKYVYYKGIFGTSTPMVSKQMLDFKSPKKSLSYEREKLCESSLGHSQKSKKRTAPSKMDQSKDPSAPENLNHSVSNSQTSEAQDNNLESHITDKSHKLKRKGDLEFEMQMEMLFLLQQLDVLRVKWGRKYIAVKKFDRKVGAYRCCELIIDGEDKVEAMVAACRTSLRYVVAFAGHGAKDVTRRYCMKWYKIASQRVNSTWWESVLAPLRNLESGATGGVVHLRTNQISATEANMNDSFVPTRSSIEDVELETRALTEPLPTNQQVVSKVTLANMMFDIVYSHPVYPRTCVQTVMTKERWLREGLQVKPNEHPAKELKRSIKPQKVQDFEADDYDCTTDSKENIKLYGKWQLEPLNLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFRSAYSVAKRLEIDSAPAMVGFEFKNGRAHPVYNGIVVCAEFKDILLEVFLFPDE*

>MsG0580028931.01.T02

MPVYCFWLFAVKFAEDETKSQHNTEGSLTEISKGAVGKLLRRANKGGTSKKKTTVEFEPVQNGTQVVEPIVPPKTSEVEHCSRNSIGKDSADEKCGHVSIDDGYIDKKEELDDSDWEDGTVAVDDHPMTIELNVTPESSAKKQIRRASAEDKELAELVHKVHLLCLLAHSVFIFLISRSSSIIMAGFSAFSTSSALAPAIKCHKAYFKISMSFNLMGMFHENFHAKNYTNGEKSPHFALASALELREGSPEEVHLFQ*