AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022104.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022104.01.T01 MTR_4g088495 100.000 305 0 0 1 305 533 837 0.0 605
MsG0480022104.01.T01 MTR_4g088495 99.672 305 1 0 1 305 77 381 0.0 602
MsG0480022104.01.T01 MTR_4g088495 99.672 305 1 0 1 305 153 457 0.0 602
MsG0480022104.01.T01 MTR_4g088495 99.672 305 1 0 1 305 229 533 0.0 602
MsG0480022104.01.T01 MTR_4g088495 99.672 305 1 0 1 305 305 609 0.0 602
MsG0480022104.01.T01 MTR_4g088495 99.672 305 1 0 1 305 381 685 0.0 602
MsG0480022104.01.T01 MTR_4g088495 99.672 305 1 0 1 305 457 761 0.0 602
MsG0480022104.01.T01 MTR_4g088495 99.344 305 2 0 1 305 1 305 0.0 598
MsG0480022104.01.T01 MTR_4g080797 100.000 305 0 0 1 305 77 381 0.0 604
MsG0480022104.01.T01 MTR_4g080797 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 MTR_8g018230 100.000 305 0 0 1 305 229 533 0.0 604
MsG0480022104.01.T01 MTR_8g018230 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 MTR_8g018230 99.672 305 1 0 1 305 77 381 0.0 602
MsG0480022104.01.T01 MTR_8g018230 99.672 305 1 0 1 305 153 457 0.0 602
MsG0480022104.01.T01 MTR_8g018230 100.000 305 0 0 1 305 153 457 0.0 604
MsG0480022104.01.T01 MTR_8g018230 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 MTR_8g018230 99.672 305 1 0 1 305 77 381 0.0 602
MsG0480022104.01.T01 MTR_8g018230 100.000 305 0 0 1 305 153 457 0.0 604
MsG0480022104.01.T01 MTR_8g018230 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 MTR_8g018230 99.672 305 1 0 1 305 77 381 0.0 602
MsG0480022104.01.T01 MTR_8g018230 100.000 305 0 0 1 305 77 381 0.0 604
MsG0480022104.01.T01 MTR_8g018230 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 MTR_4g081010 99.672 305 1 0 1 305 77 381 0.0 603
MsG0480022104.01.T01 MTR_4g081010 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 MTR_4g091580 99.672 305 1 0 1 305 77 381 0.0 603
MsG0480022104.01.T01 MTR_4g091580 99.344 305 2 0 1 305 1 305 0.0 600
MsG0480022104.01.T01 MTR_4g081010 99.672 305 1 0 1 305 1 305 0.0 603
MsG0480022104.01.T01 MTR_4g081010 99.672 305 1 0 1 305 229 533 0.0 603
MsG0480022104.01.T01 MTR_4g081010 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 MTR_4g081010 99.672 305 1 0 1 305 77 381 0.0 602
MsG0480022104.01.T01 MTR_4g081010 99.672 305 1 0 1 305 153 457 0.0 602
MsG0480022104.01.T01 MTR_8g081020 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 MTR_8g081020 100.000 304 0 0 1 304 77 380 0.0 602
MsG0480022104.01.T01 MTR_4g091580 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 MTR_4g091580 99.344 305 2 0 1 305 229 533 0.0 600
MsG0480022104.01.T01 MTR_4g091580 99.016 305 3 0 1 305 77 381 0.0 597
MsG0480022104.01.T01 MTR_4g091580 99.016 305 3 0 1 305 153 457 0.0 597
MsG0480022104.01.T01 MTR_6g061930 94.426 305 2 1 1 305 1 290 0.0 561
MsG0480022104.01.T01 MTR_8g018230 88.525 305 0 1 1 305 1 270 0.0 517
MsG0480022104.01.T01 MTR_4g081010 100.000 244 0 0 1 244 1 244 3.97e-174 483
MsG0480022104.01.T01 MTR_4g081010 99.563 229 1 0 77 305 1 229 1.29e-162 454
MsG0480022104.01.T01 MTR_7g116360 100.000 229 0 0 77 305 1 229 8.06e-164 455
MsG0480022104.01.T01 MTR_7g116360 99.563 229 1 0 1 229 1 229 8.99e-163 452
MsG0480022104.01.T01 MTR_7g116360 100.000 229 0 0 77 305 49 277 1.68e-163 456
MsG0480022104.01.T01 MTR_7g116360 99.563 229 1 0 1 229 49 277 1.75e-162 453
MsG0480022104.01.T01 MTR_1g066390 100.000 228 0 0 1 228 1 228 1.11e-162 452
MsG0480022104.01.T01 MTR_1g066390 100.000 228 0 0 77 304 1 228 1.11e-162 452
MsG0480022104.01.T01 MTR_4g088485 93.450 229 0 1 77 305 1 214 6.77e-149 416
MsG0480022104.01.T01 MTR_4g088485 93.013 229 1 1 1 229 1 214 7.30e-148 414
MsG0480022104.01.T01 MTR_4g080920 89.035 228 25 0 1 228 1 228 8.68e-143 402
MsG0480022104.01.T01 MTR_4g080920 89.035 228 25 0 77 304 1 228 8.68e-143 402
MsG0480022104.01.T01 MTR_8g479250 67.949 312 53 6 1 300 1 277 1.87e-121 350
MsG0480022104.01.T01 MTR_8g479250 65.145 241 48 5 77 305 1 217 1.59e-83 254
MsG0480022104.01.T01 MTR_5g092700 80.263 152 30 0 1 152 1 152 3.11e-82 245
MsG0480022104.01.T01 MTR_5g092700 80.263 152 30 0 77 228 1 152 3.11e-82 245
MsG0480022104.01.T01 MTR_5g092700 80.263 152 30 0 153 304 1 152 3.11e-82 245
MsG0480022104.01.T01 MTR_4g073580 80.263 152 30 0 1 152 1 152 3.11e-82 245
MsG0480022104.01.T01 MTR_4g073580 80.263 152 30 0 77 228 1 152 3.11e-82 245
MsG0480022104.01.T01 MTR_4g073580 80.263 152 30 0 153 304 1 152 3.11e-82 245
MsG0480022104.01.T01 MTR_4g073580 67.033 182 30 1 1 152 1 182 1.26e-75 229
MsG0480022104.01.T01 MTR_4g073580 67.033 182 30 1 77 228 1 182 1.26e-75 229
MsG0480022104.01.T01 MTR_4g073580 67.033 182 30 1 153 304 1 182 1.26e-75 229
MsG0480022104.01.T01 MTR_3g092130 98.701 77 1 0 1 77 1 77 4.80e-48 157
MsG0480022104.01.T01 MTR_3g092130 98.701 77 1 0 77 153 1 77 4.80e-48 157
MsG0480022104.01.T01 MTR_3g092130 98.701 77 1 0 153 229 1 77 4.80e-48 157
MsG0480022104.01.T01 MTR_3g092130 98.701 77 1 0 229 305 1 77 6.63e-48 157
MsG0480022104.01.T01 MTR_7g105080 98.701 77 1 0 1 77 1 77 7.82e-48 157
MsG0480022104.01.T01 MTR_7g105080 98.701 77 1 0 77 153 1 77 7.82e-48 157
MsG0480022104.01.T01 MTR_7g105080 98.701 77 1 0 153 229 1 77 7.82e-48 157
MsG0480022104.01.T01 MTR_7g105080 98.701 77 1 0 229 305 1 77 1.05e-47 156
MsG0480022104.01.T01 MTR_3g092130 98.701 77 1 0 1 77 1 77 7.82e-48 157
MsG0480022104.01.T01 MTR_3g092130 98.701 77 1 0 77 153 1 77 7.82e-48 157
MsG0480022104.01.T01 MTR_3g092130 98.701 77 1 0 153 229 1 77 7.82e-48 157
MsG0480022104.01.T01 MTR_3g092130 98.701 77 1 0 229 305 1 77 1.05e-47 156
MsG0480022104.01.T01 MTR_1g059690 98.701 77 1 0 1 77 1 77 7.82e-48 157
MsG0480022104.01.T01 MTR_1g059690 98.701 77 1 0 77 153 1 77 7.82e-48 157
MsG0480022104.01.T01 MTR_1g059690 98.701 77 1 0 153 229 1 77 7.82e-48 157
MsG0480022104.01.T01 MTR_1g059690 98.701 77 1 0 229 305 1 77 1.05e-47 156
MsG0480022104.01.T01 MTR_8g088060 97.436 78 2 0 1 78 1 78 2.79e-47 156
MsG0480022104.01.T01 MTR_8g088060 97.436 78 2 0 77 154 1 78 2.79e-47 156
MsG0480022104.01.T01 MTR_8g088060 97.436 78 2 0 153 230 1 78 2.79e-47 156
MsG0480022104.01.T01 MTR_8g088060 100.000 76 0 0 229 304 1 76 3.28e-47 156
MsG0480022104.01.T01 MTR_5g033960 97.436 78 2 0 1 78 1 78 2.88e-47 156
MsG0480022104.01.T01 MTR_5g033960 97.436 78 2 0 77 154 1 78 2.88e-47 156
MsG0480022104.01.T01 MTR_5g033960 97.436 78 2 0 153 230 1 78 2.88e-47 156
MsG0480022104.01.T01 MTR_5g033960 100.000 76 0 0 229 304 1 76 3.39e-47 156
MsG0480022104.01.T01 MTR_1g046640 71.053 76 22 0 1 76 240 315 8.64e-27 107
MsG0480022104.01.T01 MTR_1g046640 71.053 76 22 0 77 152 240 315 8.64e-27 107
MsG0480022104.01.T01 MTR_1g046640 71.053 76 22 0 153 228 240 315 8.64e-27 107
MsG0480022104.01.T01 MTR_1g046640 71.053 76 22 0 229 304 240 315 8.64e-27 107
MsG0480022104.01.T01 MTR_5g076660 63.855 83 30 0 67 149 256 338 4.72e-26 105
MsG0480022104.01.T01 MTR_5g076660 63.855 83 30 0 143 225 256 338 4.72e-26 105
MsG0480022104.01.T01 MTR_5g076660 63.855 83 30 0 219 301 256 338 4.72e-26 105
MsG0480022104.01.T01 MTR_5g076660 69.863 73 22 0 1 73 266 338 9.21e-26 105
MsG0480022104.01.T01 MTR_5g076810 68.831 77 23 1 1 76 194 270 5.21e-26 104
MsG0480022104.01.T01 MTR_5g076810 68.831 77 23 1 77 152 194 270 5.21e-26 104
MsG0480022104.01.T01 MTR_5g076810 68.831 77 23 1 153 228 194 270 5.21e-26 104
MsG0480022104.01.T01 MTR_5g076810 68.831 77 23 1 229 304 194 270 5.21e-26 104
MsG0480022104.01.T01 MTR_5g061310 60.000 75 30 0 1 75 2 76 1.56e-23 92.0
MsG0480022104.01.T01 MTR_5g061310 60.000 75 30 0 77 151 2 76 1.56e-23 92.0
MsG0480022104.01.T01 MTR_5g061310 60.000 75 30 0 153 227 2 76 1.56e-23 92.0
MsG0480022104.01.T01 MTR_5g061310 60.000 75 30 0 229 303 2 76 1.56e-23 92.0
MsG0480022104.01.T01 MTR_5g067400 68.421 76 24 0 1 76 241 316 2.27e-23 98.2
MsG0480022104.01.T01 MTR_5g067400 68.421 76 24 0 77 152 241 316 2.27e-23 98.2
MsG0480022104.01.T01 MTR_5g067400 68.421 76 24 0 153 228 241 316 2.27e-23 98.2
MsG0480022104.01.T01 MTR_5g067400 68.421 76 24 0 229 304 241 316 2.27e-23 98.2
MsG0480022104.01.T01 MTR_5g076370 59.036 83 34 0 67 149 257 339 4.74e-22 94.7
MsG0480022104.01.T01 MTR_5g076370 59.036 83 34 0 143 225 257 339 4.74e-22 94.7
MsG0480022104.01.T01 MTR_5g076370 59.036 83 34 0 219 301 257 339 4.74e-22 94.7
MsG0480022104.01.T01 MTR_5g076370 64.384 73 26 0 1 73 267 339 8.70e-22 94.0
MsG0480022104.01.T01 MTR_5g076505 61.333 75 29 0 1 75 240 314 6.82e-21 91.3
MsG0480022104.01.T01 MTR_5g076505 61.333 75 29 0 77 151 240 314 6.82e-21 91.3
MsG0480022104.01.T01 MTR_5g076505 61.333 75 29 0 153 227 240 314 6.82e-21 91.3
MsG0480022104.01.T01 MTR_5g076505 61.333 75 29 0 229 303 240 314 6.82e-21 91.3
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 1 76 171 246 1.00e-20 89.4
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 77 152 171 246 1.00e-20 89.4
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 153 228 171 246 1.00e-20 89.4
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 229 304 171 246 1.00e-20 89.4
MsG0480022104.01.T01 MTR_2g038430 61.333 75 29 0 1 75 268 342 1.21e-20 90.9
MsG0480022104.01.T01 MTR_2g038430 61.333 75 29 0 77 151 268 342 1.21e-20 90.9
MsG0480022104.01.T01 MTR_2g038430 61.333 75 29 0 153 227 268 342 1.21e-20 90.9
MsG0480022104.01.T01 MTR_2g038430 61.333 75 29 0 229 303 268 342 1.21e-20 90.9
MsG0480022104.01.T01 MTR_5g076720 65.333 75 26 0 1 75 315 389 1.23e-20 91.7
MsG0480022104.01.T01 MTR_5g076720 65.333 75 26 0 77 151 315 389 1.23e-20 91.7
MsG0480022104.01.T01 MTR_5g076720 65.333 75 26 0 153 227 315 389 1.23e-20 91.7
MsG0480022104.01.T01 MTR_5g076720 65.333 75 26 0 229 303 315 389 1.23e-20 91.7
MsG0480022104.01.T01 MTR_5g076740 56.250 80 34 1 227 305 84 163 1.67e-20 86.7
MsG0480022104.01.T01 MTR_5g076740 57.692 78 32 1 75 151 84 161 3.58e-20 85.9
MsG0480022104.01.T01 MTR_5g076740 57.692 78 32 1 151 227 84 161 3.58e-20 85.9
MsG0480022104.01.T01 MTR_5g076740 59.211 76 30 1 1 75 86 161 4.27e-20 85.9
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 1 76 240 315 1.83e-20 90.1
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 77 152 240 315 1.83e-20 90.1
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 153 228 240 315 1.83e-20 90.1
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 229 304 240 315 1.83e-20 90.1
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 1 76 240 315 2.44e-20 89.7
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 77 152 240 315 2.44e-20 89.7
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 153 228 240 315 2.44e-20 89.7
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 229 304 240 315 2.44e-20 89.7
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 1 76 271 346 3.49e-20 89.7
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 77 152 271 346 3.49e-20 89.7
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 153 228 271 346 3.49e-20 89.7
MsG0480022104.01.T01 MTR_1g046650 57.895 76 32 0 229 304 271 346 3.49e-20 89.7
MsG0480022104.01.T01 MTR_2g038420 60.000 75 30 0 1 75 260 334 6.16e-20 89.0
MsG0480022104.01.T01 MTR_2g038420 60.000 75 30 0 77 151 260 334 6.16e-20 89.0
MsG0480022104.01.T01 MTR_2g038420 60.000 75 30 0 153 227 260 334 6.16e-20 89.0
MsG0480022104.01.T01 MTR_2g038420 60.000 75 30 0 229 303 260 334 6.16e-20 89.0
MsG0480022104.01.T01 MTR_4g080783 53.409 88 11 1 44 101 7 94 8.66e-20 82.8
MsG0480022104.01.T01 MTR_4g080783 53.409 88 11 1 120 177 7 94 8.66e-20 82.8
MsG0480022104.01.T01 MTR_4g080783 53.409 88 11 1 196 253 7 94 8.66e-20 82.8
MsG0480022104.01.T01 MTR_7g094390 54.118 85 39 0 67 151 392 476 4.60e-19 87.4
MsG0480022104.01.T01 MTR_7g094390 54.118 85 39 0 143 227 392 476 4.60e-19 87.4
MsG0480022104.01.T01 MTR_7g094390 54.118 85 39 0 219 303 392 476 4.60e-19 87.4
MsG0480022104.01.T01 MTR_7g094390 58.667 75 31 0 1 75 402 476 6.91e-19 87.0
MsG0480022104.01.T01 MTR_5g076520 56.410 78 33 1 229 305 244 321 4.39e-18 83.6
MsG0480022104.01.T01 MTR_5g076520 57.333 75 31 1 1 74 244 318 8.46e-18 82.8
MsG0480022104.01.T01 MTR_5g076520 57.333 75 31 1 77 150 244 318 8.46e-18 82.8
MsG0480022104.01.T01 MTR_5g076520 57.333 75 31 1 153 226 244 318 8.46e-18 82.8
MsG0480022104.01.T01 MTR_7g024290 60.526 76 29 1 1 75 241 316 5.48e-17 80.1
MsG0480022104.01.T01 MTR_7g024290 60.526 76 29 1 77 151 241 316 5.48e-17 80.1
MsG0480022104.01.T01 MTR_7g024290 60.526 76 29 1 153 227 241 316 5.48e-17 80.1
MsG0480022104.01.T01 MTR_7g024290 60.526 76 29 1 229 303 241 316 5.48e-17 80.1
MsG0480022104.01.T01 MTR_5g061290 53.333 75 35 0 1 75 252 326 3.10e-16 78.2
MsG0480022104.01.T01 MTR_5g061290 53.333 75 35 0 77 151 252 326 3.10e-16 78.2
MsG0480022104.01.T01 MTR_5g061290 53.333 75 35 0 153 227 252 326 3.10e-16 78.2
MsG0480022104.01.T01 MTR_5g061290 53.333 75 35 0 229 303 252 326 3.10e-16 78.2
MsG0480022104.01.T01 MTR_4g009980 55.224 67 30 0 9 75 4 70 4.42e-16 72.0
MsG0480022104.01.T01 MTR_4g009980 55.224 67 30 0 85 151 4 70 4.42e-16 72.0
MsG0480022104.01.T01 MTR_4g009980 55.224 67 30 0 161 227 4 70 4.42e-16 72.0
MsG0480022104.01.T01 MTR_4g009980 55.224 67 30 0 237 303 4 70 4.42e-16 72.0
MsG0480022104.01.T01 MTR_8g027610 31.953 169 103 6 65 226 26 189 6.20e-16 78.6
MsG0480022104.01.T01 MTR_8g027610 31.953 169 103 6 141 302 26 189 6.20e-16 78.6
MsG0480022104.01.T01 MTR_8g027610 33.974 156 91 6 3 150 38 189 2.04e-15 77.0
MsG0480022104.01.T01 MTR_3g091400 32.484 157 102 4 148 301 22 177 1.89e-15 77.0
MsG0480022104.01.T01 MTR_3g091400 33.562 146 94 3 7 149 32 177 2.83e-15 76.6
MsG0480022104.01.T01 MTR_2g088760 26.522 230 144 5 15 221 14 241 4.73e-15 73.9
MsG0480022104.01.T01 MTR_2g088760 31.724 145 86 4 167 300 14 156 4.66e-11 62.4
MsG0480022104.01.T01 MTR_7g117395 32.278 158 100 5 1 152 37 193 2.47e-14 73.6
MsG0480022104.01.T01 MTR_7g117395 32.278 158 100 5 77 228 37 193 2.47e-14 73.6
MsG0480022104.01.T01 MTR_7g117395 32.278 158 100 5 153 304 37 193 2.47e-14 73.6
MsG0480022104.01.T01 MTR_5g076760 58.621 58 24 0 10 67 4 61 7.43e-14 66.2
MsG0480022104.01.T01 MTR_5g076760 58.621 58 24 0 86 143 4 61 7.43e-14 66.2
MsG0480022104.01.T01 MTR_5g076760 58.621 58 24 0 162 219 4 61 7.43e-14 66.2
MsG0480022104.01.T01 MTR_5g076760 58.621 58 24 0 238 295 4 61 7.43e-14 66.2
MsG0480022104.01.T01 MTR_5g076780 56.452 62 27 0 13 74 2 63 1.01e-13 65.5
MsG0480022104.01.T01 MTR_5g076780 56.452 62 27 0 89 150 2 63 1.01e-13 65.5
MsG0480022104.01.T01 MTR_5g076780 56.452 62 27 0 165 226 2 63 1.01e-13 65.5
MsG0480022104.01.T01 MTR_5g076780 56.452 62 27 0 241 302 2 63 1.01e-13 65.5
MsG0480022104.01.T01 MTR_5g076350 50.000 74 36 1 1 73 8 81 6.46e-13 63.9
MsG0480022104.01.T01 MTR_5g076350 50.000 74 36 1 77 149 8 81 6.46e-13 63.9
MsG0480022104.01.T01 MTR_5g076350 50.000 74 36 1 153 225 8 81 6.46e-13 63.9
MsG0480022104.01.T01 MTR_5g076350 50.000 74 36 1 229 301 8 81 6.46e-13 63.9
MsG0480022104.01.T01 MTR_5g076340 52.000 75 34 2 1 73 9 83 3.45e-12 62.0
MsG0480022104.01.T01 MTR_5g076340 52.000 75 34 2 77 149 9 83 3.45e-12 62.0
MsG0480022104.01.T01 MTR_5g076340 52.000 75 34 2 153 225 9 83 3.45e-12 62.0
MsG0480022104.01.T01 MTR_5g076340 52.000 75 34 2 229 301 9 83 3.45e-12 62.0
MsG0480022104.01.T01 MTR_5g009120 24.405 168 121 3 62 224 16 182 8.93e-11 62.8
MsG0480022104.01.T01 MTR_5g009120 24.405 168 121 3 138 300 16 182 8.93e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022104.01.T01 AT4G05320 100.000 305 0 0 1 305 77 381 0.0 604
MsG0480022104.01.T01 AT4G05320 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 AT4G05320 100.000 305 0 0 1 305 153 457 0.0 604
MsG0480022104.01.T01 AT4G05320 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 AT4G05320 99.672 305 1 0 1 305 77 381 0.0 602
MsG0480022104.01.T01 AT4G05320 100.000 305 0 0 1 305 77 381 0.0 604
MsG0480022104.01.T01 AT4G05320 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 AT4G05320 100.000 305 0 0 1 305 153 457 0.0 604
MsG0480022104.01.T01 AT4G05320 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 AT4G05320 99.672 305 1 0 1 305 77 381 0.0 602
MsG0480022104.01.T01 AT4G05320 100.000 305 0 0 1 305 1 305 0.0 604
MsG0480022104.01.T01 AT4G05320 100.000 305 0 0 1 305 77 381 0.0 604
MsG0480022104.01.T01 AT4G05320 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 AT4G05320 100.000 305 0 0 1 305 1 305 0.0 604
MsG0480022104.01.T01 AT4G02890 100.000 305 0 0 1 305 1 305 0.0 604
MsG0480022104.01.T01 AT4G02890 100.000 305 0 0 1 305 1 305 0.0 604
MsG0480022104.01.T01 AT5G20620 99.672 305 1 0 1 305 1 305 0.0 602
MsG0480022104.01.T01 AT5G20620 100.000 304 0 0 1 304 77 380 0.0 602
MsG0480022104.01.T01 AT5G03240 100.000 304 0 0 1 304 1 304 0.0 602
MsG0480022104.01.T01 AT5G03240 100.000 304 0 0 1 304 1 304 0.0 602
MsG0480022104.01.T01 AT5G03240 100.000 304 0 0 1 304 1 304 0.0 602
MsG0480022104.01.T01 AT5G20620 100.000 304 0 0 1 304 1 304 0.0 602
MsG0480022104.01.T01 AT1G65350 93.711 318 5 2 1 304 1 317 0.0 570
MsG0480022104.01.T01 AT5G37640 90.492 305 28 1 1 304 3 307 0.0 538
MsG0480022104.01.T01 AT4G05050 100.000 229 0 0 77 305 1 229 8.44e-164 455
MsG0480022104.01.T01 AT4G05050 99.563 229 1 0 1 229 1 229 9.42e-163 452
MsG0480022104.01.T01 AT4G05050 100.000 229 0 0 77 305 1 229 8.44e-164 455
MsG0480022104.01.T01 AT4G05050 99.563 229 1 0 1 229 1 229 9.42e-163 452
MsG0480022104.01.T01 AT4G05050 100.000 229 0 0 77 305 1 229 8.44e-164 455
MsG0480022104.01.T01 AT4G05050 99.563 229 1 0 1 229 1 229 9.42e-163 452
MsG0480022104.01.T01 AT4G02890 100.000 229 0 0 77 305 1 229 8.44e-164 455
MsG0480022104.01.T01 AT4G02890 99.563 229 1 0 1 229 1 229 9.42e-163 452
MsG0480022104.01.T01 AT4G02890 100.000 229 0 0 77 305 1 229 8.44e-164 455
MsG0480022104.01.T01 AT4G02890 99.563 229 1 0 1 229 1 229 9.42e-163 452
MsG0480022104.01.T01 AT3G09790 78.481 316 56 3 1 304 3 318 4.94e-162 465
MsG0480022104.01.T01 AT3G09790 72.347 311 73 3 1 302 319 625 1.26e-140 411
MsG0480022104.01.T01 AT3G09790 70.126 318 77 4 1 304 238 551 9.10e-137 401
MsG0480022104.01.T01 AT3G09790 78.481 316 56 3 1 304 3 318 4.94e-162 465
MsG0480022104.01.T01 AT3G09790 72.347 311 73 3 1 302 319 625 1.26e-140 411
MsG0480022104.01.T01 AT3G09790 70.126 318 77 4 1 304 238 551 9.10e-137 401
MsG0480022104.01.T01 AT1G55060 94.298 228 13 0 1 228 1 228 1.71e-153 429
MsG0480022104.01.T01 AT1G55060 94.298 228 13 0 77 304 1 228 1.71e-153 429
MsG0480022104.01.T01 AT4G05050 100.000 153 0 0 153 305 1 153 4.99e-106 306
MsG0480022104.01.T01 AT4G05050 99.346 153 1 0 1 153 1 153 5.30e-105 303
MsG0480022104.01.T01 AT4G05050 99.346 153 1 0 77 229 1 153 5.30e-105 303
MsG0480022104.01.T01 AT4G05320 100.000 153 0 0 153 305 1 153 4.99e-106 306
MsG0480022104.01.T01 AT4G05320 99.346 153 1 0 1 153 1 153 5.30e-105 303
MsG0480022104.01.T01 AT4G05320 99.346 153 1 0 77 229 1 153 5.30e-105 303
MsG0480022104.01.T01 AT1G31340 81.046 153 29 0 153 305 1 153 9.85e-84 249
MsG0480022104.01.T01 AT1G31340 78.846 156 33 0 1 156 1 156 1.03e-82 246
MsG0480022104.01.T01 AT1G31340 78.846 156 33 0 77 232 1 156 1.03e-82 246
MsG0480022104.01.T01 AT2G35635 79.739 153 31 0 1 153 1 153 5.45e-82 244
MsG0480022104.01.T01 AT2G35635 79.739 153 31 0 77 229 1 153 5.45e-82 244
MsG0480022104.01.T01 AT2G35635 79.739 153 31 0 153 305 1 153 7.64e-82 244
MsG0480022104.01.T01 AT3G52590 98.701 77 1 0 1 77 1 77 9.12e-48 156
MsG0480022104.01.T01 AT3G52590 98.701 77 1 0 77 153 1 77 9.12e-48 156
MsG0480022104.01.T01 AT3G52590 98.701 77 1 0 153 229 1 77 9.12e-48 156
MsG0480022104.01.T01 AT3G52590 98.701 77 1 0 229 305 1 77 1.13e-47 156
MsG0480022104.01.T01 AT2G36170 98.701 77 1 0 1 77 1 77 9.12e-48 156
MsG0480022104.01.T01 AT2G36170 98.701 77 1 0 77 153 1 77 9.12e-48 156
MsG0480022104.01.T01 AT2G36170 98.701 77 1 0 153 229 1 77 9.12e-48 156
MsG0480022104.01.T01 AT2G36170 98.701 77 1 0 229 305 1 77 1.13e-47 156
MsG0480022104.01.T01 AT2G47110 97.436 78 2 0 1 78 1 78 2.95e-47 156
MsG0480022104.01.T01 AT2G47110 97.436 78 2 0 77 154 1 78 2.95e-47 156
MsG0480022104.01.T01 AT2G47110 97.436 78 2 0 153 230 1 78 2.95e-47 156
MsG0480022104.01.T01 AT2G47110 100.000 76 0 0 229 304 1 76 3.43e-47 156
MsG0480022104.01.T01 AT2G47110 97.436 78 2 0 1 78 1 78 2.95e-47 156
MsG0480022104.01.T01 AT2G47110 97.436 78 2 0 77 154 1 78 2.95e-47 156
MsG0480022104.01.T01 AT2G47110 97.436 78 2 0 153 230 1 78 2.95e-47 156
MsG0480022104.01.T01 AT2G47110 100.000 76 0 0 229 304 1 76 3.43e-47 156
MsG0480022104.01.T01 AT3G62250 97.436 78 2 0 1 78 1 78 3.18e-47 156
MsG0480022104.01.T01 AT3G62250 97.436 78 2 0 77 154 1 78 3.18e-47 156
MsG0480022104.01.T01 AT3G62250 97.436 78 2 0 153 230 1 78 3.18e-47 156
MsG0480022104.01.T01 AT3G62250 100.000 76 0 0 229 304 1 76 3.78e-47 156
MsG0480022104.01.T01 AT1G23410 100.000 76 0 0 1 76 1 76 6.34e-47 155
MsG0480022104.01.T01 AT1G23410 100.000 76 0 0 77 152 1 76 6.34e-47 155
MsG0480022104.01.T01 AT1G23410 100.000 76 0 0 153 228 1 76 6.34e-47 155
MsG0480022104.01.T01 AT1G23410 100.000 76 0 0 229 304 1 76 6.34e-47 155
MsG0480022104.01.T01 AT1G53930 49.091 165 54 7 8 149 1 158 9.29e-34 121
MsG0480022104.01.T01 AT1G53930 49.091 165 54 7 84 225 1 158 9.29e-34 121
MsG0480022104.01.T01 AT1G53930 49.091 165 54 7 160 301 1 158 9.29e-34 121
MsG0480022104.01.T01 AT1G53930 75.342 73 18 0 1 73 86 158 7.30e-31 114
MsG0480022104.01.T01 AT1G53950 41.463 164 55 3 71 227 14 143 1.80e-26 102
MsG0480022104.01.T01 AT1G53950 41.463 164 55 3 147 303 14 143 1.80e-26 102
MsG0480022104.01.T01 AT1G53950 43.038 158 49 3 1 151 20 143 3.31e-26 101
MsG0480022104.01.T01 AT1G11980 54.545 77 35 0 1 77 1 77 1.45e-22 89.7
MsG0480022104.01.T01 AT1G11980 54.545 77 35 0 77 153 1 77 1.45e-22 89.7
MsG0480022104.01.T01 AT1G11980 54.545 77 35 0 153 229 1 77 1.45e-22 89.7
MsG0480022104.01.T01 AT1G11980 54.545 77 35 0 229 305 1 77 1.53e-22 89.7
MsG0480022104.01.T01 AT2G46500 35.862 145 90 2 7 148 40 184 3.52e-19 87.8
MsG0480022104.01.T01 AT2G46500 35.862 145 90 2 159 300 40 184 3.52e-19 87.8
MsG0480022104.01.T01 AT2G46500 35.862 145 90 2 7 148 40 184 4.99e-19 87.8
MsG0480022104.01.T01 AT2G46500 35.862 145 90 2 159 300 40 184 4.99e-19 87.8
MsG0480022104.01.T01 AT2G46500 35.862 145 90 2 7 148 40 184 4.99e-19 87.8
MsG0480022104.01.T01 AT2G46500 35.862 145 90 2 159 300 40 184 4.99e-19 87.8
MsG0480022104.01.T01 AT1G53945 38.356 146 53 3 1 143 1 112 2.21e-17 77.0
MsG0480022104.01.T01 AT1G53945 38.356 146 53 3 77 219 1 112 2.21e-17 77.0
MsG0480022104.01.T01 AT1G53945 38.356 146 53 3 153 295 1 112 2.21e-17 77.0
MsG0480022104.01.T01 AT5G24240 33.793 145 91 3 7 147 38 181 1.22e-13 71.6
MsG0480022104.01.T01 AT5G24240 33.793 145 91 3 83 223 38 181 1.22e-13 71.6
MsG0480022104.01.T01 AT5G24240 33.793 145 91 3 159 299 38 181 1.22e-13 71.6
MsG0480022104.01.T01 AT5G24240 33.793 145 91 3 7 147 38 181 1.22e-13 71.6
MsG0480022104.01.T01 AT5G24240 33.793 145 91 3 83 223 38 181 1.22e-13 71.6
MsG0480022104.01.T01 AT5G24240 33.793 145 91 3 159 299 38 181 1.22e-13 71.6

Find 101 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACAATATCGAACAATTT+TGG 0.186545 4:+68291747 None:intergenic
ACCATCCTCCAATTGCTTTC+CGG 0.228225 4:+68290729 None:intergenic
TGCACTCTTTGTCTAATAAA+TGG 0.235567 4:-68290370 MsG0480022104.01.T01:three_prime_UTR
ACCCTCTTTGTCCTGGATCT+TGG 0.274270 4:+68291011 None:intergenic
ACATAACAATATCAACTAAA+AGG 0.292549 4:+68290325 None:intergenic
AAAATAAGCCTCTGCTGATC+TGG 0.304914 4:+68290526 None:intergenic
ACCCTCTTTGTCCTGAATCT+TGG 0.309404 4:+68291239 None:intergenic
ATATTTGTGAAGACGCTTAC+TGG 0.318290 4:-68290631 MsG0480022104.01.T01:CDS
CAGCAGAGGCTTATCTTTGC+AGG 0.323151 4:-68290976 MsG0480022104.01.T01:CDS
CAGCAGAGGCTTATCTTTGC+TGG 0.346608 4:-68291204 MsG0480022104.01.T01:CDS
AATGCAAAGTAGATTCCTTC+TGG 0.349783 4:+68290683 None:intergenic
TAATGTCAAGGCCAAGATTC+AGG 0.350237 4:-68291250 MsG0480022104.01.T01:CDS
GAAGGAATCTACTTTGCATT+TGG 0.357379 4:-68290680 MsG0480022104.01.T01:CDS
TAAGTGTGTTCCAGTATGTT+TGG 0.362098 4:-68290406 MsG0480022104.01.T01:three_prime_UTR
TTAGTTGATATTGTTATGTT+TGG 0.363597 4:-68290321 MsG0480022104.01.T01:three_prime_UTR
TTCCATTTCATAATATGCTT+AGG 0.364866 4:-68291792 None:intergenic
AATGAAGGGTAGATTCCTTC+TGG 0.382623 4:+68291139 None:intergenic
TCCATTTCATAATATGCTTA+GGG 0.388647 4:-68291791 None:intergenic
GACGGGAAAGACTATTACTT+TGG 0.390154 4:-68290842 MsG0480022104.01.T01:CDS
AATGAAGGGTGGATTCCTTC+TGG 0.393830 4:+68290911 None:intergenic
GAAGGAATCCACCCTTCATT+TGG 0.394555 4:-68290908 MsG0480022104.01.T01:CDS
TACTGGGAAGACTATTACCT+TGG 0.397132 4:-68290614 MsG0480022104.01.T01:CDS
AAGATAAGCCTCTGCTGATC+AGG 0.398269 4:+68291210 None:intergenic
AAGATAAGCCTCTGCTGATC+AGG 0.404708 4:+68290982 None:intergenic
GAAGGAATCTACCCTTCATT+TGG 0.416312 4:-68291136 MsG0480022104.01.T01:CDS
GTGGGATACCCTCTTTGTCC+TGG 0.442832 4:+68291004 None:intergenic
AAAATTAGTCTCTGCTGGTC+TGG 0.443739 4:+68290754 None:intergenic
GACGCACAGACCAAACATAC+TGG 0.454219 4:+68290396 None:intergenic
TCAATCTAAGCACCAAATGA+AGG 0.460679 4:+68290896 None:intergenic
CTTGGCCTTGACATTATCAA+TGG 0.462747 4:+68291029 None:intergenic
AAATAAGCCTCTGCTGATCT+GGG 0.465164 4:+68290527 None:intergenic
TCAATCTAAGCACCAAATGA+AGG 0.467207 4:+68291124 None:intergenic
CACCCTAGAGGTTGAATCCT+CGG 0.468211 4:-68291055 MsG0480022104.01.T01:CDS
CATTTGGTGCTTAGATTGAG+AGG 0.480984 4:-68290892 MsG0480022104.01.T01:CDS
CATTTGGTGCTTAGATTGAG+AGG 0.480984 4:-68291120 MsG0480022104.01.T01:CDS
CACCCTTGAGGTGGAATCAT+CGG 0.482660 4:-68291283 MsG0480022104.01.T01:CDS
ATTGGAGGATGGTCGTACTT+TGG 0.488133 4:-68290719 MsG0480022104.01.T01:CDS
TCTGGATGTTATAATCAGCT+AGG 0.489504 4:+68291157 None:intergenic
ATCTTTGTGAAAACATTGAC+TGG 0.491047 4:-68291315 MsG0480022104.01.T01:CDS
AGCAGAGGCTTATCTTTGCT+GGG 0.491816 4:-68291203 MsG0480022104.01.T01:CDS
GGGAAAGACTATTACTTTGG+AGG 0.502909 4:-68290839 MsG0480022104.01.T01:CDS
TCTGGATGTTATAATCAGCT+AGG 0.505255 4:+68290929 None:intergenic
TGGGAAGACTATTACCTTGG+AGG 0.507917 4:-68290611 MsG0480022104.01.T01:CDS
TAATGTCAAGGCCAAGATCC+AGG 0.518614 4:-68291022 MsG0480022104.01.T01:CDS
AAAGACTATTACTTTGGAGG+TGG 0.523715 4:-68290836 MsG0480022104.01.T01:CDS
TGATTCCACCTCAAGGGTGA+TGG 0.524625 4:+68291287 None:intergenic
ATATTCGTCAAGACTTTGAC+CGG 0.529492 4:-68291087 MsG0480022104.01.T01:CDS
GCTGGCAAGCAGTTGGAGGA+TGG 0.535241 4:-68290502 MsG0480022104.01.T01:CDS
TATTTGTGAAGACGCTTACT+GGG 0.538804 4:-68290630 MsG0480022104.01.T01:CDS
GTTGGAGGATGGTCGTACTC+TGG 0.539382 4:-68290491 MsG0480022104.01.T01:CDS
GCAGGGAAACAACTAGAAGA+TGG 0.551920 4:-68290958 MsG0480022104.01.T01:CDS
TATCCGAGGATTCAACCTCT+AGG 0.556980 4:+68291052 None:intergenic
GCCGGAAAGCAATTGGAGGA+TGG 0.558534 4:-68290730 MsG0480022104.01.T01:CDS
AGCAAAGATACAAGATAAGG+AGG 0.559260 4:-68290557 MsG0480022104.01.T01:CDS
CTGGATGTTATAATCAGCTA+GGG 0.560371 4:+68291158 None:intergenic
GAAAGCAAAGATACAAGATA+AGG 0.565523 4:-68290560 MsG0480022104.01.T01:CDS
ATCCGAGGATTCAACCTCTA+GGG 0.568186 4:+68291053 None:intergenic
AGCAGAGGCTTATCTTTGCA+GGG 0.572317 4:-68290975 MsG0480022104.01.T01:CDS
CTTGTTCTTCGTCTCCGTGG+TGG 0.572507 4:-68290433 MsG0480022104.01.T01:CDS
GAAGACTATTACCTTGGAGG+TGG 0.573223 4:-68290608 MsG0480022104.01.T01:CDS
GCTGGGAAACAACTCGAGGA+TGG 0.573656 4:-68291186 MsG0480022104.01.T01:CDS
GGATTCAACCTCTAGGGTGA+TGG 0.575072 4:+68291059 None:intergenic
ATAAGCCTCTGCTGATCAGG+TGG 0.575147 4:+68290985 None:intergenic
GACATTATCAATGGTATCCG+AGG 0.576477 4:+68291038 None:intergenic
GGAGACGAAGAACAAGATGC+AGG 0.577541 4:+68290440 None:intergenic
ATAAGCCTCTGCTGATCAGG+AGG 0.578405 4:+68291213 None:intergenic
ATCAGAGCTTTCCACCTCCA+AGG 0.582807 4:+68290597 None:intergenic
CAATCTAAGCACCAAATGAA+GGG 0.584307 4:+68291125 None:intergenic
TTGTCTAATAAATGGTGTGT+TGG 0.584454 4:-68290362 MsG0480022104.01.T01:three_prime_UTR
ATTAGTCTCTGCTGGTCTGG+AGG 0.592481 4:+68290757 None:intergenic
CAATCTAAGCACCAAATGAA+GGG 0.592660 4:+68290897 None:intergenic
CTGGATGTTATAATCAGCTA+GGG 0.596159 4:+68290930 None:intergenic
TATCCGATGATTCCACCTCA+AGG 0.598701 4:+68291280 None:intergenic
CAAAACCATCACCCTTGAGG+TGG 0.600034 4:-68291292 MsG0480022104.01.T01:CDS
CATCTTGTTCTTCGTCTCCG+TGG 0.603344 4:-68290436 MsG0480022104.01.T01:CDS
ATAAGCCTCTGCTGATCTGG+GGG 0.604365 4:+68290529 None:intergenic
GGCCAAGATTCAGGACAAAG+AGG 0.609724 4:-68291241 MsG0480022104.01.T01:CDS
AATAAGCCTCTGCTGATCTG+GGG 0.611344 4:+68290528 None:intergenic
GGCCAAGATCCAGGACAAAG+AGG 0.613915 4:-68291013 MsG0480022104.01.T01:CDS
GCCAAGATCCAGGACAAAGA+GGG 0.620887 4:-68291012 MsG0480022104.01.T01:CDS
GCCAAGATTCAGGACAAAGA+GGG 0.620887 4:-68291240 MsG0480022104.01.T01:CDS
GCAAAGATACAAGATAAGGA+GGG 0.621833 4:-68290556 MsG0480022104.01.T01:CDS
GGAAACAACTAGAAGATGGA+AGG 0.625020 4:-68290954 MsG0480022104.01.T01:CDS
GGATACAATTGATAATGTCA+AGG 0.626130 4:-68291262 MsG0480022104.01.T01:CDS
GGCTGATTATAATATCCAGA+AGG 0.627715 4:-68290698 MsG0480022104.01.T01:CDS
TTGGTGCTTAGATTGAGAGG+TGG 0.628688 4:-68290889 MsG0480022104.01.T01:CDS
TTGGTGCTTAGATTGAGAGG+TGG 0.628688 4:-68291117 MsG0480022104.01.T01:CDS
ATCCGATGATTCCACCTCAA+GGG 0.629259 4:+68291281 None:intergenic
GGATACCATTGATAATGTCA+AGG 0.634466 4:-68291034 MsG0480022104.01.T01:CDS
AGATACTATTGATAATGTCA+AGG 0.637037 4:-68290806 MsG0480022104.01.T01:CDS
TGGCAAAACCATCACCCTTG+AGG 0.648872 4:-68291295 MsG0480022104.01.T01:CDS
TCTAAGCACCAAATGAAGGG+TGG 0.651428 4:+68290900 None:intergenic
GTATCCCTCCTGATCAGCAG+AGG 0.654458 4:-68291218 MsG0480022104.01.T01:CDS
CTTTGCTGGGAAACAACTCG+AGG 0.660573 4:-68291190 MsG0480022104.01.T01:CDS
TAAGCCTCTGCTGATCAGGA+GGG 0.663439 4:+68291214 None:intergenic
GTATCCCACCTGATCAGCAG+AGG 0.664066 4:-68290990 MsG0480022104.01.T01:CDS
GAGACGAAGAACAAGATGCA+GGG 0.665092 4:+68290441 None:intergenic
TAAGCCTCTGCTGATCAGGT+GGG 0.669417 4:+68290986 None:intergenic
AGCTGATTATAACATCCAGA+AGG 0.677696 4:-68290926 MsG0480022104.01.T01:CDS
AGCTGATTATAACATCCAGA+AGG 0.677696 4:-68291154 MsG0480022104.01.T01:CDS
AACACACTTAGAAGCCACCA+CGG 0.699059 4:+68290419 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATATTATGTTTTATTTTC+TGG - Chr4:68291775-68291794 MsG0480022104.01.T01:five_prime_UTR 10.0%
!! AGAAAATTAAACAACTAATT+TGG + Chr4:68290598-68290617 None:intergenic 15.0%
!!! TTGTTTAATTTTCTATTTTC+TGG - Chr4:68290604-68290623 MsG0480022104.01.T01:CDS 15.0%
!! AAAAAACTTCACATAATCTA+TGG + Chr4:68290572-68290591 None:intergenic 20.0%
!! AAAAGTAAACAACAAATTTG+GGG + Chr4:68290426-68290445 None:intergenic 20.0%
!! ACAAAAGTAAACAACAAATT+TGG + Chr4:68290428-68290447 None:intergenic 20.0%
!! ACATAACAATATCAACTAAA+AGG + Chr4:68291717-68291736 None:intergenic 20.0%
!! CAAAAGTAAACAACAAATTT+GGG + Chr4:68290427-68290446 None:intergenic 20.0%
!!! ATAACAATATCGAACAATTT+TGG + Chr4:68290295-68290314 None:intergenic 20.0%
!!! TTAGTTGATATTGTTATGTT+TGG - Chr4:68291718-68291737 MsG0480022104.01.T01:five_prime_UTR 20.0%
! TTCAATTTCGTTGAAAAAGT+TGG - Chr4:68290486-68290505 MsG0480022104.01.T01:CDS 25.0%
!!! AGATACTATTGATAATGTCA+AGG - Chr4:68291233-68291252 MsG0480022104.01.T01:CDS 25.0%
!!! GTTGCTATTTAGATGAATTA+GGG - Chr4:68290446-68290465 MsG0480022104.01.T01:CDS 25.0%
!!! TGTTGCTATTTAGATGAATT+AGG - Chr4:68290445-68290464 MsG0480022104.01.T01:CDS 25.0%
AAACCCTAATTGATCGAAAT+TGG + Chr4:68290644-68290663 None:intergenic 30.0%
AACCCTAATTGATCGAAATT+GGG + Chr4:68290643-68290662 None:intergenic 30.0%
ATCCCAATTTCGATCAATTA+GGG - Chr4:68290638-68290657 MsG0480022104.01.T01:CDS 30.0%
ATCTTTGTGAAAACATTGAC+TGG - Chr4:68290724-68290743 MsG0480022104.01.T01:CDS 30.0%
GAAAGCAAAGATACAAGATA+AGG - Chr4:68291479-68291498 MsG0480022104.01.T01:intron 30.0%
GATCAAGTGAGAAATTGAAT+TGG + Chr4:68290528-68290547 None:intergenic 30.0%
GCAAAAATTCAGGATAAAGA+GGG - Chr4:68291255-68291274 MsG0480022104.01.T01:CDS 30.0%
TAATGTCAAGGCAAAAATTC+AGG - Chr4:68291245-68291264 MsG0480022104.01.T01:CDS 30.0%
TATCCCAATTTCGATCAATT+AGG - Chr4:68290637-68290656 MsG0480022104.01.T01:CDS 30.0%
TGATCGAAATTGGGATAATA+AGG + Chr4:68290634-68290653 None:intergenic 30.0%
TGCACTCTTTGTCTAATAAA+TGG - Chr4:68291669-68291688 MsG0480022104.01.T01:intron 30.0%
TTGTCTAATAAATGGTGTGT+TGG - Chr4:68291677-68291696 MsG0480022104.01.T01:intron 30.0%
! ACAATATCGAACAATTTTGG+AGG + Chr4:68290292-68290311 None:intergenic 30.0%
! ATTTTTGTGAAGACTTTGAC+GGG - Chr4:68291180-68291199 MsG0480022104.01.T01:CDS 30.0%
! GATTTTTGTGAAGACTTTGA+CGG - Chr4:68291179-68291198 MsG0480022104.01.T01:CDS 30.0%
! TGCTGGATGATTTTGAATAT+AGG - Chr4:68290335-68290354 MsG0480022104.01.T01:three_prime_UTR 30.0%
!! GGATACAATTGATAATGTCA+AGG - Chr4:68290777-68290796 MsG0480022104.01.T01:CDS 30.0%
AATGCAAAGTAGATTCCTTC+TGG + Chr4:68291359-68291378 None:intergenic 35.0%
AGCAAAGATACAAGATAAGG+AGG - Chr4:68291482-68291501 MsG0480022104.01.T01:intron 35.0%
AGCTGATTATAACATCCAGA+AGG - Chr4:68290885-68290904 MsG0480022104.01.T01:CDS 35.0%
ATATTCGTCAAGACTTTGAC+CGG - Chr4:68290952-68290971 MsG0480022104.01.T01:CDS 35.0%
ATATTTGTGAAGACGCTTAC+TGG - Chr4:68291408-68291427 MsG0480022104.01.T01:intron 35.0%
CAATCTAAGCACCAAATGAA+GGG + Chr4:68290917-68290936 None:intergenic 35.0%
CTGGATGTTATAATCAGCTA+GGG + Chr4:68290884-68290903 None:intergenic 35.0%
GAAATTGAAACAGAACACCA+CGG + Chr4:68290475-68290494 None:intergenic 35.0%
GAAGGAATCTACTTTGCATT+TGG - Chr4:68291359-68291378 MsG0480022104.01.T01:intron 35.0%
GCAAAGATACAAGATAAGGA+GGG - Chr4:68291483-68291502 MsG0480022104.01.T01:intron 35.0%
GGCAAAAATTCAGGATAAAG+AGG - Chr4:68291254-68291273 MsG0480022104.01.T01:CDS 35.0%
GGCTGATTATAATATCCAGA+AGG - Chr4:68291341-68291360 MsG0480022104.01.T01:intron 35.0%
TAAGTGTGTTCCAGTATGTT+TGG - Chr4:68291633-68291652 MsG0480022104.01.T01:intron 35.0%
TATTTGTGAAGACGCTTACT+GGG - Chr4:68291409-68291428 MsG0480022104.01.T01:intron 35.0%
TCAATCTAAGCACCAAATGA+AGG + Chr4:68290918-68290937 None:intergenic 35.0%
TCTGGATGTTATAATCAGCT+AGG + Chr4:68290885-68290904 None:intergenic 35.0%
! AAAGACTATTACTTTGGAGG+TGG - Chr4:68291203-68291222 MsG0480022104.01.T01:CDS 35.0%
! AATTTTTGCCGGAAAGCAAT+TGG - Chr4:68291302-68291321 MsG0480022104.01.T01:CDS 35.0%
!! GGATACCATTGATAATGTCA+AGG - Chr4:68291005-68291024 MsG0480022104.01.T01:CDS 35.0%
!! TTTTACAGTTTTTGCTGTGC+TGG - Chr4:68290318-68290337 MsG0480022104.01.T01:three_prime_UTR 35.0%
!!! CTACTTTGCATTTGGTTTTG+AGG - Chr4:68291367-68291386 MsG0480022104.01.T01:intron 35.0%
AAAATAAGCCTCTGCTGATC+TGG + Chr4:68291516-68291535 None:intergenic 40.0%
AAATAAGCCTCTGCTGATCT+GGG + Chr4:68291515-68291534 None:intergenic 40.0%
AATGAAGGGTAGATTCCTTC+TGG + Chr4:68290903-68290922 None:intergenic 40.0%
GAAGGAATCTACCCTTCATT+TGG - Chr4:68290903-68290922 MsG0480022104.01.T01:CDS 40.0%
GACATTATCAATGGTATCCG+AGG + Chr4:68291004-68291023 None:intergenic 40.0%
GACGGGAAAGACTATTACTT+TGG - Chr4:68291197-68291216 MsG0480022104.01.T01:CDS 40.0%
GGAAACAACTAGAAGATGGA+AGG - Chr4:68291085-68291104 MsG0480022104.01.T01:CDS 40.0%
GGGAAAGACTATTACTTTGG+AGG - Chr4:68291200-68291219 MsG0480022104.01.T01:CDS 40.0%
TAATGTCAAGGCCAAGATTC+AGG - Chr4:68290789-68290808 MsG0480022104.01.T01:CDS 40.0%
TACTGGGAAGACTATTACCT+TGG - Chr4:68291425-68291444 MsG0480022104.01.T01:intron 40.0%
TAGATGAATTAGGGTTTCCG+TGG - Chr4:68290455-68290474 MsG0480022104.01.T01:CDS 40.0%
! AAAATTAGTCTCTGCTGGTC+TGG + Chr4:68291288-68291307 None:intergenic 40.0%
! CAGCAGAGACTAATTTTTGC+CGG - Chr4:68291291-68291310 MsG0480022104.01.T01:CDS 40.0%
!! CATTTGGTGCTTAGATTGAG+AGG - Chr4:68290919-68290938 MsG0480022104.01.T01:CDS 40.0%
!! CTTGGCCTTGACATTATCAA+TGG + Chr4:68290785-68290804 None:intergenic 40.0%
!! TATTTTTGCTGGCAAGCAGT+TGG - Chr4:68291530-68291549 MsG0480022104.01.T01:intron 40.0%
AACACACTTAGAAGCCACCA+CGG + Chr4:68291623-68291642 None:intergenic 45.0%
AAGATAAGCCTCTGCTGATC+AGG + Chr4:68290832-68290851 None:intergenic 45.0%
AATAAGCCTCTGCTGATCTG+GGG + Chr4:68291514-68291533 None:intergenic 45.0%
ACCATCCTCCAATTGCTTTC+CGG + Chr4:68291313-68291332 None:intergenic 45.0%
ACCCTCTTTGTCCTGAATCT+TGG + Chr4:68290803-68290822 None:intergenic 45.0%
AGCAGAGGCTTATCTTTGCA+GGG - Chr4:68291064-68291083 MsG0480022104.01.T01:CDS 45.0%
AGCAGAGGCTTATCTTTGCT+GGG - Chr4:68290836-68290855 MsG0480022104.01.T01:CDS 45.0%
ATCCGAGGATTCAACCTCTA+GGG + Chr4:68290989-68291008 None:intergenic 45.0%
ATCCGATGATTCCACCTCAA+GGG + Chr4:68290761-68290780 None:intergenic 45.0%
ATTGGAGGATGGTCGTACTT+TGG - Chr4:68291320-68291339 MsG0480022104.01.T01:CDS 45.0%
GAAGACTATTACCTTGGAGG+TGG - Chr4:68291431-68291450 MsG0480022104.01.T01:intron 45.0%
GAAGGAATCCACCCTTCATT+TGG - Chr4:68291131-68291150 MsG0480022104.01.T01:CDS 45.0%
GAGACGAAGAACAAGATGCA+GGG + Chr4:68291601-68291620 None:intergenic 45.0%
GCAGGGAAACAACTAGAAGA+TGG - Chr4:68291081-68291100 MsG0480022104.01.T01:CDS 45.0%
GCCAAGATTCAGGACAAAGA+GGG - Chr4:68290799-68290818 MsG0480022104.01.T01:CDS 45.0%
TAATGTCAAGGCCAAGATCC+AGG - Chr4:68291017-68291036 MsG0480022104.01.T01:CDS 45.0%
TATCCGAGGATTCAACCTCT+AGG + Chr4:68290990-68291009 None:intergenic 45.0%
TATCCGATGATTCCACCTCA+AGG + Chr4:68290762-68290781 None:intergenic 45.0%
TCTAAGCACCAAATGAAGGG+TGG + Chr4:68290914-68290933 None:intergenic 45.0%
TGGGAAGACTATTACCTTGG+AGG - Chr4:68291428-68291447 MsG0480022104.01.T01:intron 45.0%
! AATGAAGGGTGGATTCCTTC+TGG + Chr4:68291131-68291150 None:intergenic 45.0%
! CGGCAAAAATTAGTCTCTGC+TGG + Chr4:68291293-68291312 None:intergenic 45.0%
! TTGGTGCTTAGATTGAGAGG+TGG - Chr4:68290922-68290941 MsG0480022104.01.T01:CDS 45.0%
! TTTTGCCGGAAAGCAATTGG+AGG - Chr4:68291305-68291324 MsG0480022104.01.T01:CDS 45.0%
!!! CAGCAGAGGCTTATTTTTGC+TGG - Chr4:68291519-68291538 MsG0480022104.01.T01:intron 45.0%
!!! CATTTGGTTTTGAGGCTTCG+TGG - Chr4:68291375-68291394 MsG0480022104.01.T01:intron 45.0%
!!! CTCTAGGGTGATGGTTTTTC+CGG + Chr4:68290974-68290993 None:intergenic 45.0%
ACCCTCTTTGTCCTGGATCT+TGG + Chr4:68291031-68291050 None:intergenic 50.0%
ATAAGCCTCTGCTGATCAGG+AGG + Chr4:68290829-68290848 None:intergenic 50.0%
ATAAGCCTCTGCTGATCAGG+TGG + Chr4:68290829-68290848 None:intergenic 50.0%
ATAAGCCTCTGCTGATCTGG+GGG + Chr4:68291513-68291532 None:intergenic 50.0%
ATCAGAGCTTTCCACCTCCA+AGG + Chr4:68291445-68291464 None:intergenic 50.0%
CAAAACCATCACCCTTGAGG+TGG - Chr4:68290747-68290766 MsG0480022104.01.T01:CDS 50.0%
CACCCTAGAGGTTGAATCCT+CGG - Chr4:68290984-68291003 MsG0480022104.01.T01:CDS 50.0%
CACCCTTGAGGTGGAATCAT+CGG - Chr4:68290756-68290775 MsG0480022104.01.T01:CDS 50.0%
CAGCAGAGGCTTATCTTTGC+AGG - Chr4:68290835-68290854 MsG0480022104.01.T01:CDS 50.0%
CAGCAGAGGCTTATCTTTGC+TGG - Chr4:68290835-68290854 MsG0480022104.01.T01:CDS 50.0%
CATCTTGTTCTTCGTCTCCG+TGG - Chr4:68291603-68291622 MsG0480022104.01.T01:intron 50.0%
CGGAAAAACCATCACCCTAG+AGG - Chr4:68290972-68290991 MsG0480022104.01.T01:CDS 50.0%
CTTTGCTGGGAAACAACTCG+AGG - Chr4:68290849-68290868 MsG0480022104.01.T01:CDS 50.0%
GACGCACAGACCAAACATAC+TGG + Chr4:68291646-68291665 None:intergenic 50.0%
GCCAAGATCCAGGACAAAGA+GGG - Chr4:68291027-68291046 MsG0480022104.01.T01:CDS 50.0%
GGAGACGAAGAACAAGATGC+AGG + Chr4:68291602-68291621 None:intergenic 50.0%
GGCCAAGATTCAGGACAAAG+AGG - Chr4:68290798-68290817 MsG0480022104.01.T01:CDS 50.0%
TAAGCCTCTGCTGATCAGGA+GGG + Chr4:68290828-68290847 None:intergenic 50.0%
TAAGCCTCTGCTGATCAGGT+GGG + Chr4:68291056-68291075 None:intergenic 50.0%
TGATTCCACCTCAAGGGTGA+TGG + Chr4:68290755-68290774 None:intergenic 50.0%
TGGCAAAACCATCACCCTTG+AGG - Chr4:68290744-68290763 MsG0480022104.01.T01:CDS 50.0%
! ATTAGTCTCTGCTGGTCTGG+AGG + Chr4:68291285-68291304 None:intergenic 50.0%
! TTTTGCTGGCAAGCAGTTGG+AGG - Chr4:68291533-68291552 MsG0480022104.01.T01:intron 50.0%
!! GGATTCAACCTCTAGGGTGA+TGG + Chr4:68290983-68291002 None:intergenic 50.0%
!!! TTGGTTTTGAGGCTTCGTGG+TGG - Chr4:68291378-68291397 MsG0480022104.01.T01:intron 50.0%
CTTGTTCTTCGTCTCCGTGG+TGG - Chr4:68291606-68291625 MsG0480022104.01.T01:intron 55.0%
GCCGGAAAGCAATTGGAGGA+TGG - Chr4:68291309-68291328 MsG0480022104.01.T01:CDS 55.0%
GCTGGGAAACAACTCGAGGA+TGG - Chr4:68290853-68290872 MsG0480022104.01.T01:CDS 55.0%
GGCCAAGATCCAGGACAAAG+AGG - Chr4:68291026-68291045 MsG0480022104.01.T01:CDS 55.0%
GTATCCCACCTGATCAGCAG+AGG - Chr4:68291049-68291068 MsG0480022104.01.T01:CDS 55.0%
GTATCCCTCCTGATCAGCAG+AGG - Chr4:68290821-68290840 MsG0480022104.01.T01:CDS 55.0%
GTATTCCCCCAGATCAGCAG+AGG - Chr4:68291505-68291524 MsG0480022104.01.T01:intron 55.0%
GTGGGATACCCTCTTTGTCC+TGG + Chr4:68291038-68291057 None:intergenic 55.0%
GTTGGAGGATGGTCGTACTC+TGG - Chr4:68291548-68291567 MsG0480022104.01.T01:intron 55.0%
GCTGGCAAGCAGTTGGAGGA+TGG - Chr4:68291537-68291556 MsG0480022104.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 68290261 68291800 68290261 ID=MsG0480022104.01;Name=MsG0480022104.01
Chr4 mRNA 68290261 68291800 68290261 ID=MsG0480022104.01.T01;Parent=MsG0480022104.01;Name=MsG0480022104.01.T01;_AED=0.50;_eAED=0.50;_QI=96|1|1|1|0|0.5|2|165|305
Chr4 exon 68290261 68291343 68290261 ID=MsG0480022104.01.T01:exon:4973;Parent=MsG0480022104.01.T01
Chr4 exon 68291705 68291800 68291705 ID=MsG0480022104.01.T01:exon:4972;Parent=MsG0480022104.01.T01
Chr4 five_prime_UTR 68291705 68291800 68291705 ID=MsG0480022104.01.T01:five_prime_utr;Parent=MsG0480022104.01.T01
Chr4 CDS 68290426 68291343 68290426 ID=MsG0480022104.01.T01:cds;Parent=MsG0480022104.01.T01
Chr4 three_prime_UTR 68290261 68290425 68290261 ID=MsG0480022104.01.T01:three_prime_utr;Parent=MsG0480022104.01.T01
Gene Sequence

>MsG0480022104.01.T01

ATGCAAATCTTTGTGAAAACATTGACTGGCAAAACCATCACCCTTGAGGTGGAATCATCGGATACAATTGATAATGTCAAGGCCAAGATTCAGGACAAAGAGGGTATCCCTCCTGATCAGCAGAGGCTTATCTTTGCTGGGAAACAACTCGAGGATGGAAGAACCCTAGCTGATTATAACATCCAGAAGGAATCTACCCTTCATTTGGTGCTTAGATTGAGAGGTGGAATGCAGATATTCGTCAAGACTTTGACCGGAAAAACCATCACCCTAGAGGTTGAATCCTCGGATACCATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATCCCACCTGATCAGCAGAGGCTTATCTTTGCAGGGAAACAACTAGAAGATGGAAGGACCCTAGCTGATTATAACATCCAGAAGGAATCCACCCTTCATTTGGTGCTTAGATTGAGAGGTGGAATGCAGATTTTTGTGAAGACTTTGACGGGAAAGACTATTACTTTGGAGGTGGAGAGTTCAGATACTATTGATAATGTCAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCAGACCAGCAGAGACTAATTTTTGCCGGAAAGCAATTGGAGGATGGTCGTACTTTGGCTGATTATAATATCCAGAAGGAATCTACTTTGCATTTGGTTTTGAGGCTTCGTGGTGGCATGCAAATATTTGTGAAGACGCTTACTGGGAAGACTATTACCTTGGAGGTGGAAAGCTCTGATACTATTGATAATGTGAAAGCAAAGATACAAGATAAGGAGGGTATTCCCCCAGATCAGCAGAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTCTGGCAGATTACAATATTCAGAAAGAATCTACCCTGCATCTTGTTCTTCGTCTCCGTGGTGGCTTCTAA

Protein sequence

>MsG0480022104.01.T01

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF*