AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028964.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028964.01.T01 MTR_5g079120 93.254 252 17 0 1 252 55 306 5.25e-177 489
MsG0580028964.01.T01 MTR_7g017260 66.794 262 72 5 1 252 19 275 5.31e-119 341
MsG0580028964.01.T01 MTR_5g079290 62.500 256 87 3 1 249 11 264 1.84e-104 303
MsG0580028964.01.T01 MTR_5g078910 57.285 302 76 3 1 252 1 299 2.07e-103 302
MsG0580028964.01.T01 MTR_8g060940 65.613 253 76 4 1 252 1 243 2.83e-103 300
MsG0580028964.01.T01 MTR_0001s0360 60.078 258 90 4 1 251 1 252 2.84e-99 290
MsG0580028964.01.T01 MTR_5g078950 59.470 264 87 4 1 246 1 262 2.15e-97 286
MsG0580028964.01.T01 MTR_5g078930 62.500 232 58 3 1 225 3 212 1.79e-93 274
MsG0580028964.01.T01 MTR_5g078800 57.836 268 82 8 1 247 1 258 6.09e-88 262
MsG0580028964.01.T01 MTR_5g079220 56.538 260 96 5 4 251 18 272 5.89e-84 252
MsG0580028964.01.T01 MTR_0247s0040 73.370 184 45 1 1 184 1 180 7.88e-84 248
MsG0580028964.01.T01 MTR_5g078860 50.495 303 95 7 1 249 1 302 1.23e-81 247
MsG0580028964.01.T01 MTR_0193s0090 61.929 197 65 3 1 196 1 188 1.81e-79 238
MsG0580028964.01.T01 MTR_0197s0010 47.977 173 79 2 11 176 5 173 5.43e-52 169
MsG0580028964.01.T01 MTR_0023s0260 54.545 165 64 3 91 247 10 171 3.32e-49 160
MsG0580028964.01.T01 MTR_3g083540 61.607 112 43 0 6 117 40 151 1.97e-47 159
MsG0580028964.01.T01 MTR_4g125520 54.815 135 61 0 6 140 11 145 3.74e-47 159
MsG0580028964.01.T01 MTR_8g027345 65.094 106 37 0 6 111 11 116 1.26e-46 157
MsG0580028964.01.T01 MTR_7g117730 64.151 106 38 0 6 111 11 116 2.03e-46 155
MsG0580028964.01.T01 MTR_7g115650 59.434 106 43 0 6 111 11 116 2.94e-44 148
MsG0580028964.01.T01 MTR_1g076150 53.226 124 58 0 6 129 11 134 1.34e-43 148
MsG0580028964.01.T01 MTR_7g010210 60.377 106 42 0 6 111 11 116 1.70e-43 150
MsG0580028964.01.T01 MTR_1g043080 38.326 227 124 5 5 216 10 235 1.74e-43 148
MsG0580028964.01.T01 MTR_7g010210 60.377 106 42 0 6 111 11 116 1.97e-43 148
MsG0580028964.01.T01 MTR_4g073420 46.939 147 72 1 9 149 14 160 5.77e-43 147
MsG0580028964.01.T01 MTR_4g091490 55.172 116 52 0 2 117 8 123 1.54e-42 148
MsG0580028964.01.T01 MTR_2g011660 55.172 116 52 0 2 117 8 123 3.05e-42 147
MsG0580028964.01.T01 MTR_4g478180 57.143 112 48 0 6 117 12 123 3.27e-42 147
MsG0580028964.01.T01 MTR_5g079670 53.782 119 55 0 7 125 11 129 4.00e-42 143
MsG0580028964.01.T01 MTR_3g097450 50.000 136 68 0 9 144 14 149 7.32e-42 145
MsG0580028964.01.T01 MTR_4g485530 43.820 178 89 3 9 184 14 182 9.79e-42 141
MsG0580028964.01.T01 MTR_2g089620 56.250 112 49 0 6 117 11 122 1.65e-41 145
MsG0580028964.01.T01 MTR_5g029840 57.143 112 48 0 6 117 11 122 2.10e-41 144
MsG0580028964.01.T01 MTR_5g007370 53.571 112 52 0 6 117 11 122 2.73e-41 143
MsG0580028964.01.T01 MTR_1g043050 54.545 110 50 0 5 114 10 119 3.05e-41 142
MsG0580028964.01.T01 MTR_7g096930 53.600 125 57 1 6 129 11 135 3.30e-41 142
MsG0580028964.01.T01 MTR_1g100653 56.140 114 50 0 6 119 11 124 3.64e-41 143
MsG0580028964.01.T01 MTR_2g034790 44.966 149 68 1 6 154 11 145 4.14e-41 144
MsG0580028964.01.T01 MTR_3g074520 53.571 112 52 0 6 117 11 122 4.55e-41 144
MsG0580028964.01.T01 MTR_0251s0050 54.545 121 55 0 6 126 12 132 4.59e-41 142
MsG0580028964.01.T01 MTR_4g082290 59.434 106 43 0 6 111 11 116 5.12e-41 145
MsG0580028964.01.T01 MTR_3g039990 55.556 117 52 0 6 122 12 128 5.44e-41 143
MsG0580028964.01.T01 MTR_4g082230 60.000 105 42 0 7 111 12 116 8.21e-41 145
MsG0580028964.01.T01 MTR_8g020490 61.165 103 40 0 9 111 10 112 9.38e-41 140
MsG0580028964.01.T01 MTR_0140s0030 58.491 106 44 0 6 111 12 117 1.02e-40 143
MsG0580028964.01.T01 MTR_0489s0020 58.491 106 44 0 6 111 12 117 1.02e-40 143
MsG0580028964.01.T01 MTR_7g087130 58.491 106 44 0 6 111 11 116 1.87e-40 142
MsG0580028964.01.T01 MTR_4g121460 57.547 106 45 0 6 111 11 116 2.17e-40 142
MsG0580028964.01.T01 MTR_7g011170 51.220 123 60 0 6 128 11 133 2.28e-40 141
MsG0580028964.01.T01 MTR_0008s0470 49.630 135 67 1 6 140 12 145 2.38e-40 140
MsG0580028964.01.T01 MTR_7g076740 48.201 139 66 2 5 137 10 148 2.79e-40 141
MsG0580028964.01.T01 MTR_4g100720 59.048 105 43 0 7 111 13 117 7.25e-40 136
MsG0580028964.01.T01 MTR_0023s0210 72.289 83 23 0 1 83 1 83 8.19e-40 133
MsG0580028964.01.T01 MTR_0008s0390 52.893 121 56 1 6 126 12 131 1.70e-39 138
MsG0580028964.01.T01 MTR_6g012690 57.547 106 45 0 6 111 11 116 2.95e-39 139
MsG0580028964.01.T01 MTR_6g012180 59.406 101 41 0 6 106 11 111 9.10e-39 137
MsG0580028964.01.T01 MTR_5g014990 51.695 118 56 1 7 123 12 129 4.66e-38 135
MsG0580028964.01.T01 MTR_8g031360 50.000 122 60 1 2 122 8 129 4.97e-38 135
MsG0580028964.01.T01 MTR_3g461490 53.153 111 52 0 7 117 12 122 9.48e-38 135
MsG0580028964.01.T01 MTR_6g009430 38.554 166 87 1 7 172 12 162 9.79e-38 135
MsG0580028964.01.T01 MTR_1g112760 39.412 170 83 2 7 156 13 182 2.74e-37 131
MsG0580028964.01.T01 MTR_4g102380 51.786 112 54 0 6 117 11 122 3.15e-37 132
MsG0580028964.01.T01 MTR_2g089450 50.394 127 58 1 6 132 11 132 3.43e-37 131
MsG0580028964.01.T01 MTR_1g017000 52.294 109 51 1 7 114 12 120 3.73e-37 131
MsG0580028964.01.T01 MTR_3g103570 48.800 125 56 2 7 130 12 129 3.91e-37 134
MsG0580028964.01.T01 MTR_1g017140 46.154 130 68 2 7 135 12 140 6.18e-37 133
MsG0580028964.01.T01 MTR_7g110830 55.238 105 47 0 7 111 12 116 1.14e-36 133
MsG0580028964.01.T01 MTR_4g105130 51.351 111 54 0 7 117 12 122 1.31e-36 132
MsG0580028964.01.T01 MTR_1g110460 51.304 115 56 0 7 121 26 140 1.46e-36 131
MsG0580028964.01.T01 MTR_5g079140 49.664 149 46 3 84 225 7 133 1.47e-36 126
MsG0580028964.01.T01 MTR_8g095390 51.376 109 53 0 9 117 14 122 2.16e-36 131
MsG0580028964.01.T01 MTR_7g102110 54.630 108 48 1 7 113 12 119 2.59e-36 130
MsG0580028964.01.T01 MTR_6g090405 53.211 109 50 1 7 114 12 120 2.92e-36 129
MsG0580028964.01.T01 MTR_1g085040 51.327 113 55 0 7 119 12 124 4.52e-36 131
MsG0580028964.01.T01 MTR_1g085640 54.286 105 48 0 7 111 12 116 4.69e-36 132
MsG0580028964.01.T01 MTR_3g011610 50.926 108 53 0 7 114 37 144 7.13e-36 133
MsG0580028964.01.T01 MTR_8g017540 50.000 114 57 0 3 116 54 167 8.04e-36 131
MsG0580028964.01.T01 MTR_3g077110 51.351 111 54 0 7 117 12 122 1.16e-35 130
MsG0580028964.01.T01 MTR_2g097910 42.763 152 82 3 7 153 20 171 1.54e-35 129
MsG0580028964.01.T01 MTR_8g017440 50.000 114 57 0 3 116 8 121 1.59e-35 129
MsG0580028964.01.T01 MTR_5g042030 47.863 117 61 0 1 117 1 117 1.62e-35 128
MsG0580028964.01.T01 MTR_1g045610 56.731 104 45 0 8 111 22 125 1.65e-35 127
MsG0580028964.01.T01 MTR_2g099740 52.252 111 53 0 3 113 8 118 2.07e-35 130
MsG0580028964.01.T01 MTR_5g078140 54.717 106 48 0 6 111 11 116 2.89e-35 128
MsG0580028964.01.T01 MTR_3g065440 54.717 106 48 0 6 111 11 116 3.35e-35 128
MsG0580028964.01.T01 MTR_4g057635 49.153 118 59 1 7 123 12 129 4.63e-35 128
MsG0580028964.01.T01 MTR_1g073170 55.340 103 46 0 8 110 21 123 6.70e-35 125
MsG0580028964.01.T01 MTR_8g017500 49.123 114 58 0 3 116 8 121 8.53e-35 127
MsG0580028964.01.T01 MTR_2g089420 50.467 107 53 0 6 112 10 116 1.09e-34 129
MsG0580028964.01.T01 MTR_0063s0090 47.934 121 59 1 6 126 11 127 1.18e-34 124
MsG0580028964.01.T01 MTR_7g035075 49.153 118 60 0 7 124 14 131 1.48e-34 123
MsG0580028964.01.T01 MTR_3g052430 50.962 104 51 0 7 110 41 144 1.61e-34 130
MsG0580028964.01.T01 MTR_1g086510 42.500 160 87 1 2 156 16 175 1.74e-34 125
MsG0580028964.01.T01 MTR_3g052450 43.511 131 73 1 7 136 40 170 1.87e-34 129
MsG0580028964.01.T01 MTR_8g042410 51.923 104 50 0 7 110 37 140 2.55e-34 129
MsG0580028964.01.T01 MTR_7g109320 54.630 108 49 0 6 113 11 118 2.98e-34 126
MsG0580028964.01.T01 MTR_4g097570 55.556 99 43 1 7 104 12 110 3.58e-34 125
MsG0580028964.01.T01 MTR_8g098860 49.541 109 55 0 3 111 8 116 3.97e-34 125
MsG0580028964.01.T01 MTR_2g064160 48.649 111 57 0 7 117 11 121 4.29e-34 125
MsG0580028964.01.T01 MTR_4g063100 52.427 103 49 0 8 110 8 110 5.38e-34 123
MsG0580028964.01.T01 MTR_4g065017 50.909 110 54 0 7 116 17 126 5.72e-34 125
MsG0580028964.01.T01 MTR_0008s0280 51.923 104 50 0 6 109 11 114 5.93e-34 122
MsG0580028964.01.T01 MTR_2g096380 42.553 141 74 1 7 147 6 139 6.58e-34 122
MsG0580028964.01.T01 MTR_1g100667 50.467 107 53 0 8 114 14 120 7.24e-34 123
MsG0580028964.01.T01 MTR_1g021230 51.923 104 50 0 7 110 57 160 1.50e-33 126
MsG0580028964.01.T01 MTR_7g111290 51.667 120 58 0 7 126 12 131 1.67e-33 125
MsG0580028964.01.T01 MTR_4g128670 56.000 100 43 1 7 105 12 111 2.26e-33 124
MsG0580028964.01.T01 MTR_1g086530 46.281 121 65 0 2 122 28 148 2.60e-33 122
MsG0580028964.01.T01 MTR_6g055910 52.427 103 49 0 8 110 15 117 2.90e-33 122
MsG0580028964.01.T01 MTR_2g095520 55.000 100 44 1 7 105 12 111 4.09e-33 122
MsG0580028964.01.T01 MTR_3g028740 50.459 109 54 0 3 111 18 126 4.31e-33 123
MsG0580028964.01.T01 MTR_2g067420 50.000 100 50 0 7 106 14 113 8.68e-33 122
MsG0580028964.01.T01 MTR_6g006030 52.381 105 50 0 7 111 14 118 1.01e-32 119
MsG0580028964.01.T01 MTR_4g097570 55.000 100 43 2 7 104 12 111 1.56e-32 120
MsG0580028964.01.T01 MTR_8g017390 50.000 112 55 1 3 113 8 119 1.87e-32 124
MsG0580028964.01.T01 MTR_5g010020 49.515 103 52 0 3 105 8 110 1.22e-31 119
MsG0580028964.01.T01 MTR_2g088170 49.524 105 53 0 6 110 28 132 1.48e-31 121
MsG0580028964.01.T01 MTR_8g017340 50.926 108 52 1 7 113 12 119 4.59e-31 120
MsG0580028964.01.T01 MTR_1g083630 48.624 109 56 0 3 111 8 116 5.32e-31 120
MsG0580028964.01.T01 MTR_1g062940 49.524 105 53 0 7 111 6 110 2.80e-30 112
MsG0580028964.01.T01 MTR_8g017350 50.000 108 53 1 7 113 12 119 2.85e-30 119
MsG0580028964.01.T01 MTR_2g033170 48.276 116 60 0 7 122 24 139 7.11e-30 114
MsG0580028964.01.T01 MTR_4g123040 46.094 128 68 1 2 129 19 145 1.61e-28 110
MsG0580028964.01.T01 MTR_5g007300 53.846 78 36 0 6 83 63 140 1.33e-26 100
MsG0580028964.01.T01 MTR_5g088080 43.689 103 57 1 8 109 13 115 7.01e-26 102
MsG0580028964.01.T01 MTR_5g088150 43.689 103 57 1 8 109 13 115 7.01e-26 102
MsG0580028964.01.T01 MTR_5g488210 43.689 103 57 1 8 109 13 115 7.01e-26 102
MsG0580028964.01.T01 MTR_5g488170 43.689 103 57 1 8 109 13 115 8.64e-26 101
MsG0580028964.01.T01 MTR_5g088640 43.689 103 57 1 8 109 13 115 9.35e-26 102
MsG0580028964.01.T01 MTR_5g016510 39.683 126 75 1 9 134 5 129 1.73e-25 102
MsG0580028964.01.T01 MTR_3g045430 42.857 105 60 0 7 111 13 117 1.73e-25 102
MsG0580028964.01.T01 MTR_5g062790 42.718 103 58 1 8 109 10 112 4.79e-25 100
MsG0580028964.01.T01 MTR_4g019370 41.593 113 65 1 9 121 38 149 9.39e-25 100
MsG0580028964.01.T01 MTR_8g006470 29.091 275 153 9 7 247 10 276 3.85e-24 98.2
MsG0580028964.01.T01 MTR_5g088610 42.718 103 58 1 8 109 10 112 1.47e-23 97.8
MsG0580028964.01.T01 MTR_1g026870 42.991 107 60 1 7 113 83 188 1.50e-23 99.8
MsG0580028964.01.T01 MTR_4g063100 56.944 72 31 0 39 110 10 81 2.54e-23 94.7
MsG0580028964.01.T01 MTR_4g094982 42.857 105 59 1 9 113 5 108 2.76e-23 95.5
MsG0580028964.01.T01 MTR_3g463400 36.620 142 86 2 7 148 131 268 2.84e-23 98.2
MsG0580028964.01.T01 MTR_3g110028 42.991 107 60 1 7 113 83 188 3.87e-23 98.6
MsG0580028964.01.T01 MTR_2g096380 56.164 73 32 0 39 111 19 91 7.49e-23 93.2
MsG0580028964.01.T01 MTR_7g061330 45.714 105 56 1 7 111 111 214 1.14e-22 97.1
MsG0580028964.01.T01 MTR_7g461410 45.714 105 56 1 7 111 111 214 1.14e-22 97.1
MsG0580028964.01.T01 MTR_7g037260 42.500 120 65 2 9 128 145 260 1.46e-22 95.1
MsG0580028964.01.T01 MTR_7g061330 45.714 105 56 1 7 111 75 178 1.58e-22 96.3
MsG0580028964.01.T01 MTR_6g055910 54.930 71 32 0 40 110 18 88 2.12e-22 92.8
MsG0580028964.01.T01 MTR_5g070020 34.395 157 91 3 2 155 115 262 3.63e-22 94.0
MsG0580028964.01.T01 MTR_7g111290 51.136 88 43 0 39 126 2 89 4.99e-22 93.6
MsG0580028964.01.T01 MTR_3g101290 42.718 103 58 1 9 111 37 138 5.20e-22 91.3
MsG0580028964.01.T01 MTR_1g085770 30.672 238 132 6 7 221 11 238 5.66e-22 92.8
MsG0580028964.01.T01 MTR_4g029540 41.818 110 62 2 2 109 4 113 6.74e-22 92.4
MsG0580028964.01.T01 MTR_4g128190 39.450 109 52 2 2 109 6 101 8.81e-22 90.9
MsG0580028964.01.T01 MTR_6g015455 37.063 143 75 3 9 141 5 142 1.02e-21 94.4
MsG0580028964.01.T01 MTR_5g049190 40.741 108 63 1 3 110 13 119 1.75e-21 90.1
MsG0580028964.01.T01 MTR_7g061550 43.564 101 55 1 12 110 10 110 2.17e-21 92.0
MsG0580028964.01.T01 MTR_4g105660 43.689 103 55 2 9 110 180 280 5.14e-21 91.7
MsG0580028964.01.T01 MTR_5g041570 41.121 107 62 1 9 115 134 239 6.34e-21 91.3
MsG0580028964.01.T01 MTR_1g085880 42.857 105 58 2 7 109 11 115 7.37e-21 87.4
MsG0580028964.01.T01 MTR_4g082040 40.196 102 60 1 9 110 105 205 7.75e-20 88.2
MsG0580028964.01.T01 MTR_3g077650 41.748 103 57 2 9 110 181 281 9.09e-20 88.2
MsG0580028964.01.T01 MTR_6g074860 42.268 97 55 1 9 105 4 99 1.24e-19 85.1
MsG0580028964.01.T01 MTR_7g451170 37.931 145 76 4 9 144 191 330 2.61e-19 86.7
MsG0580028964.01.T01 MTR_3g089045 40.367 109 64 1 2 110 9 116 3.02e-19 85.1
MsG0580028964.01.T01 MTR_1g057980 40.196 102 60 1 7 108 78 178 4.19e-19 84.7
MsG0580028964.01.T01 MTR_4g088015 40.594 101 59 1 9 109 221 320 1.43e-18 84.7
MsG0580028964.01.T01 MTR_7g035350 38.462 117 69 2 12 128 228 341 1.65e-18 84.3
MsG0580028964.01.T01 MTR_6g027360 36.752 117 71 2 7 121 76 191 3.26e-18 82.4
MsG0580028964.01.T01 MTR_6g027340 36.522 115 70 2 9 121 16 129 3.58e-18 80.5
MsG0580028964.01.T01 MTR_7g037130 39.167 120 69 3 9 128 145 260 1.12e-17 81.6
MsG0580028964.01.T01 MTR_7g086960 39.216 102 61 1 9 110 89 189 2.42e-17 80.5
MsG0580028964.01.T01 MTR_6g027370 37.963 108 66 1 3 110 93 199 6.32e-17 79.3
MsG0580028964.01.T01 MTR_5g082910 38.835 103 54 2 9 107 19 116 2.59e-16 77.0
MsG0580028964.01.T01 MTR_5g010650 40.404 99 58 1 7 105 108 205 2.67e-16 78.2
MsG0580028964.01.T01 MTR_7g450950 30.000 150 98 2 9 158 157 299 3.47e-16 77.0
MsG0580028964.01.T01 MTR_8g468380 35.455 110 69 2 12 121 25 132 5.10e-13 68.6
MsG0580028964.01.T01 MTR_5g038910 31.776 107 72 1 12 118 29 134 2.47e-12 66.6
MsG0580028964.01.T01 MTR_5g038910 31.776 107 72 1 12 118 29 134 3.83e-12 65.9
MsG0580028964.01.T01 MTR_2g088730 56.410 39 17 0 65 103 34 72 1.96e-11 58.9
MsG0580028964.01.T01 MTR_6g055910 52.174 46 22 0 65 110 2 47 5.80e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028964.01.T01 AT1G66370 58.667 150 57 1 2 146 3 152 6.36e-56 179
MsG0580028964.01.T01 AT3G13540 48.485 165 80 2 6 170 22 181 6.47e-52 169
MsG0580028964.01.T01 AT1G56650 49.490 196 79 4 4 180 5 199 4.80e-49 162
MsG0580028964.01.T01 AT1G66380 71.296 108 31 0 3 110 4 111 6.53e-48 155
MsG0580028964.01.T01 AT1G66390 58.108 148 57 1 4 146 5 152 3.68e-47 157
MsG0580028964.01.T01 AT5G40330 51.724 145 63 1 8 152 13 150 5.92e-45 150
MsG0580028964.01.T01 AT5G16770 59.821 112 45 0 6 117 11 122 1.35e-44 153
MsG0580028964.01.T01 AT5G16770 59.821 112 45 0 6 117 11 122 1.35e-44 153
MsG0580028964.01.T01 AT5G16770 59.821 112 45 0 6 117 11 122 2.21e-44 152
MsG0580028964.01.T01 AT5G16770 59.821 112 45 0 6 117 11 122 2.21e-44 152
MsG0580028964.01.T01 AT3G27920 62.264 106 40 0 8 113 15 120 3.10e-44 149
MsG0580028964.01.T01 AT3G30210 38.723 235 128 6 6 233 26 251 4.18e-44 150
MsG0580028964.01.T01 AT5G14750 63.462 104 38 0 8 111 17 120 4.42e-44 148
MsG0580028964.01.T01 AT3G61250 50.725 138 64 1 6 143 11 144 5.21e-44 150
MsG0580028964.01.T01 AT1G22640 57.522 113 48 0 7 119 12 124 6.94e-44 149
MsG0580028964.01.T01 AT4G38620 49.660 147 69 3 9 151 14 159 2.68e-43 148
MsG0580028964.01.T01 AT3G02940 57.143 112 48 0 6 117 11 122 1.23e-42 147
MsG0580028964.01.T01 AT2G16720 56.757 111 48 0 7 117 12 122 1.30e-42 146
MsG0580028964.01.T01 AT4G21440 57.143 112 48 0 6 117 11 122 1.59e-42 148
MsG0580028964.01.T01 AT3G02940 57.143 112 48 0 6 117 11 122 1.65e-42 147
MsG0580028964.01.T01 AT3G02940 57.143 112 48 0 6 117 11 122 1.65e-42 147
MsG0580028964.01.T01 AT4G09460 50.388 129 63 1 9 136 14 142 3.32e-42 144
MsG0580028964.01.T01 AT3G01140 49.635 137 69 0 6 142 11 147 4.16e-42 147
MsG0580028964.01.T01 AT4G17785 56.637 113 49 0 5 117 11 123 7.25e-42 146
MsG0580028964.01.T01 AT4G17785 55.085 118 53 0 5 122 11 128 8.71e-42 146
MsG0580028964.01.T01 AT3G01140 49.635 137 69 0 6 142 54 190 1.07e-41 147
MsG0580028964.01.T01 AT3G47600 60.377 106 42 0 6 111 11 116 1.12e-41 145
MsG0580028964.01.T01 AT5G65230 54.464 112 51 0 6 117 11 122 1.34e-41 144
MsG0580028964.01.T01 AT5G35550 46.199 171 82 3 7 169 14 182 1.35e-41 143
MsG0580028964.01.T01 AT4G05100 54.310 116 53 0 2 117 8 123 2.10e-41 144
MsG0580028964.01.T01 AT5G49330 57.407 108 46 0 6 113 11 118 2.34e-41 145
MsG0580028964.01.T01 AT3G28910 60.377 106 42 0 6 111 11 116 2.36e-41 144
MsG0580028964.01.T01 AT5G62470 59.434 106 43 0 6 111 11 116 3.26e-41 144
MsG0580028964.01.T01 AT4G34990 55.963 109 48 0 9 117 14 122 6.54e-41 142
MsG0580028964.01.T01 AT4G28110 52.679 112 53 0 6 117 11 122 7.90e-41 142
MsG0580028964.01.T01 AT5G15310 55.357 112 50 0 6 117 11 122 9.04e-41 143
MsG0580028964.01.T01 AT5G15310 55.357 112 50 0 6 117 11 122 9.87e-41 140
MsG0580028964.01.T01 AT5G15310 55.357 112 50 0 6 117 11 122 1.05e-40 142
MsG0580028964.01.T01 AT5G52600 61.538 104 40 0 7 110 12 115 1.35e-40 139
MsG0580028964.01.T01 AT3G23250 48.571 140 66 2 6 145 11 144 1.43e-40 141
MsG0580028964.01.T01 AT1G74650 58.491 106 44 0 7 112 12 117 2.21e-40 142
MsG0580028964.01.T01 AT5G10280 53.571 112 52 0 6 117 11 122 3.51e-40 141
MsG0580028964.01.T01 AT1G06180 54.400 125 56 1 6 130 11 134 4.52e-40 139
MsG0580028964.01.T01 AT1G18570 47.143 140 73 1 6 144 12 151 4.59e-40 142
MsG0580028964.01.T01 AT1G35515 53.153 111 52 0 7 117 12 122 5.74e-40 137
MsG0580028964.01.T01 AT1G34670 54.464 112 51 0 6 117 11 122 6.19e-40 142
MsG0580028964.01.T01 AT5G54230 54.955 111 50 0 7 117 12 122 6.66e-40 140
MsG0580028964.01.T01 AT1G08810 54.167 120 53 1 6 125 11 128 7.61e-40 139
MsG0580028964.01.T01 AT5G61420 53.571 112 52 0 6 117 11 122 8.49e-40 141
MsG0580028964.01.T01 AT5G07700 54.464 112 51 0 6 117 11 122 9.41e-40 140
MsG0580028964.01.T01 AT5G07700 54.464 112 51 0 6 117 11 122 9.41e-40 140
MsG0580028964.01.T01 AT5G62470 59.434 106 42 1 6 111 11 115 1.10e-39 140
MsG0580028964.01.T01 AT5G07690 53.571 112 52 0 6 117 11 122 1.39e-39 140
MsG0580028964.01.T01 AT2G31180 56.604 106 46 0 6 111 11 116 2.31e-39 137
MsG0580028964.01.T01 AT1G74080 50.893 112 55 0 6 117 11 122 7.79e-39 138
MsG0580028964.01.T01 AT5G56110 54.955 111 50 0 7 117 12 122 1.10e-38 137
MsG0580028964.01.T01 AT2G47460 54.717 106 48 0 6 111 11 116 2.27e-38 137
MsG0580028964.01.T01 AT3G62610 56.604 106 46 0 6 111 11 116 3.53e-38 136
MsG0580028964.01.T01 AT4G01680 57.143 105 45 0 7 111 12 116 3.79e-38 134
MsG0580028964.01.T01 AT5G60890 53.774 106 49 0 6 111 11 116 6.15e-38 134
MsG0580028964.01.T01 AT1G74430 50.000 122 61 0 6 127 11 132 6.87e-38 134
MsG0580028964.01.T01 AT4G37780 54.128 109 49 1 6 113 11 119 1.37e-37 134
MsG0580028964.01.T01 AT4G01680 57.143 105 45 0 7 111 12 116 1.81e-37 134
MsG0580028964.01.T01 AT5G62320 40.884 181 87 6 6 170 12 188 3.20e-37 131
MsG0580028964.01.T01 AT4G26930 43.243 148 83 1 7 153 19 166 3.87e-37 135
MsG0580028964.01.T01 AT1G57560 52.252 111 53 0 7 117 12 122 4.11e-37 132
MsG0580028964.01.T01 AT5G65790 50.407 123 60 1 7 128 12 134 4.68e-37 134
MsG0580028964.01.T01 AT1G57560 52.252 111 53 0 7 117 12 122 5.36e-37 132
MsG0580028964.01.T01 AT5G57620 47.552 143 71 2 7 145 12 154 5.61e-37 133
MsG0580028964.01.T01 AT1G16490 40.000 155 91 1 7 161 14 166 1.13e-36 130
MsG0580028964.01.T01 AT3G13890 51.351 111 54 0 3 113 8 118 2.84e-36 132
MsG0580028964.01.T01 AT2G32460 52.830 106 50 0 5 110 16 121 3.06e-36 134
MsG0580028964.01.T01 AT3G46130 53.153 111 52 0 1 111 3 113 3.22e-36 129
MsG0580028964.01.T01 AT2G32460 52.830 106 50 0 5 110 4 109 3.24e-36 134
MsG0580028964.01.T01 AT5G26660 39.674 184 104 3 7 185 12 193 3.74e-36 131
MsG0580028964.01.T01 AT3G49690 54.206 107 48 1 7 112 12 118 3.74e-36 130
MsG0580028964.01.T01 AT4G22680 41.781 146 75 1 6 151 11 146 4.63e-36 129
MsG0580028964.01.T01 AT4G12350 52.252 111 53 0 7 117 12 122 4.65e-36 129
MsG0580028964.01.T01 AT5G59780 53.846 104 48 0 8 111 9 112 8.77e-36 127
MsG0580028964.01.T01 AT3G24310 52.500 120 54 1 6 125 17 133 9.13e-36 128
MsG0580028964.01.T01 AT5G55020 55.340 103 46 0 7 109 26 128 1.28e-35 133
MsG0580028964.01.T01 AT5G23000 47.222 144 73 2 7 147 12 155 1.60e-35 129
MsG0580028964.01.T01 AT1G25340 52.679 112 53 0 8 119 19 130 1.91e-35 128
MsG0580028964.01.T01 AT1G79180 47.368 114 60 0 7 120 14 127 3.20e-35 127
MsG0580028964.01.T01 AT1G66230 53.774 106 49 0 6 111 11 116 3.39e-35 127
MsG0580028964.01.T01 AT4G13480 50.806 124 60 1 8 131 7 129 3.67e-35 126
MsG0580028964.01.T01 AT1G09540 45.385 130 71 0 7 136 12 141 3.86e-35 129
MsG0580028964.01.T01 AT3G01530 52.294 109 52 0 7 115 25 133 4.40e-35 125
MsG0580028964.01.T01 AT1G18710 51.887 106 51 0 6 111 11 116 6.14e-35 126
MsG0580028964.01.T01 AT2G47190 41.818 165 83 3 7 161 20 181 7.78e-35 126
MsG0580028964.01.T01 AT5G16600 44.203 138 71 1 6 137 11 148 1.17e-34 127
MsG0580028964.01.T01 AT5G12870 49.074 108 55 0 4 111 15 122 1.47e-34 125
MsG0580028964.01.T01 AT1G68320 52.212 113 54 0 7 119 19 131 2.08e-34 125
MsG0580028964.01.T01 AT5G06100 48.113 106 55 0 5 110 30 135 3.40e-34 128
MsG0580028964.01.T01 AT4G01680 51.282 117 45 1 7 111 12 128 4.62e-34 125
MsG0580028964.01.T01 AT2G26960 50.476 105 52 0 5 109 18 122 7.02e-34 127
MsG0580028964.01.T01 AT5G06100 48.113 106 55 0 5 110 30 135 7.19e-34 128
MsG0580028964.01.T01 AT5G06100 48.113 106 55 0 5 110 30 135 7.19e-34 128
MsG0580028964.01.T01 AT5G06100 48.113 106 55 0 5 110 30 135 7.19e-34 128
MsG0580028964.01.T01 AT5G06100 48.113 106 55 0 5 110 30 135 7.19e-34 128
MsG0580028964.01.T01 AT3G12720 48.649 111 57 0 7 117 22 132 9.03e-34 124
MsG0580028964.01.T01 AT2G36890 53.211 109 50 1 7 114 12 120 1.08e-33 124
MsG0580028964.01.T01 AT5G40350 46.400 125 67 0 7 131 17 141 1.08e-33 121
MsG0580028964.01.T01 AT5G14340 50.000 112 56 0 6 117 23 134 1.25e-33 123
MsG0580028964.01.T01 AT3G28470 54.545 99 45 0 7 105 12 110 1.52e-33 124
MsG0580028964.01.T01 AT2G36890 53.211 109 50 1 7 114 53 161 1.91e-33 124
MsG0580028964.01.T01 AT3G12820 49.057 106 54 0 7 112 14 119 1.93e-33 121
MsG0580028964.01.T01 AT3G48920 42.069 145 69 1 1 145 12 141 2.41e-33 122
MsG0580028964.01.T01 AT4G25560 37.705 183 102 3 8 187 11 184 2.44e-33 122
MsG0580028964.01.T01 AT1G56160 44.355 124 69 0 7 130 14 137 2.76e-33 122
MsG0580028964.01.T01 AT3G13890 47.500 120 54 1 3 113 8 127 2.83e-33 124
MsG0580028964.01.T01 AT1G48000 47.368 133 67 2 7 139 32 161 4.08e-33 120
MsG0580028964.01.T01 AT3G11440 47.115 104 55 0 7 110 41 144 4.99e-33 125
MsG0580028964.01.T01 AT3G11440 47.115 104 55 0 7 110 41 144 1.06e-32 125
MsG0580028964.01.T01 AT3G11440 47.115 104 55 0 7 110 41 144 1.06e-32 125
MsG0580028964.01.T01 AT3G11440 47.115 104 55 0 7 110 41 144 1.06e-32 125
MsG0580028964.01.T01 AT1G63910 47.706 109 57 0 3 111 8 116 1.46e-32 122
MsG0580028964.01.T01 AT3G27810 41.667 144 80 1 7 150 20 159 1.94e-32 118
MsG0580028964.01.T01 AT3G08500 52.381 105 50 0 7 111 30 134 2.23e-32 121
MsG0580028964.01.T01 AT1G25340 50.893 112 50 1 8 119 19 125 4.20e-32 119
MsG0580028964.01.T01 AT1G25340 50.893 112 50 1 8 119 19 125 7.38e-32 119
MsG0580028964.01.T01 AT3G53200 52.885 104 49 0 7 110 9 112 1.09e-31 117
MsG0580028964.01.T01 AT5G14750 66.667 78 23 1 34 111 12 86 7.66e-31 112
MsG0580028964.01.T01 AT1G66380 57.426 101 42 1 3 102 4 104 9.12e-31 110
MsG0580028964.01.T01 AT3G06490 47.287 129 67 1 1 129 13 140 5.55e-30 114
MsG0580028964.01.T01 AT1G79180 36.054 147 61 1 7 120 14 160 6.24e-29 112
MsG0580028964.01.T01 AT1G66380 75.000 72 18 0 39 110 7 78 7.42e-29 105
MsG0580028964.01.T01 AT5G49620 45.736 129 69 1 1 129 20 147 1.14e-28 110
MsG0580028964.01.T01 AT5G35550 66.667 72 24 0 40 111 50 121 1.60e-28 109
MsG0580028964.01.T01 AT5G52260 49.533 107 54 0 8 114 13 119 1.87e-28 109
MsG0580028964.01.T01 AT3G47600 65.278 72 25 0 40 111 39 110 2.61e-26 105
MsG0580028964.01.T01 AT2G26950 42.574 101 58 0 5 105 14 114 1.28e-25 103
MsG0580028964.01.T01 AT3G09230 44.915 118 61 2 5 119 48 164 1.45e-25 103
MsG0580028964.01.T01 AT5G49620 41.259 143 69 2 1 129 20 161 4.27e-25 101
MsG0580028964.01.T01 AT5G26660 37.179 156 91 3 35 185 9 162 6.12e-25 101
MsG0580028964.01.T01 AT3G53200 58.904 73 30 0 38 110 7 79 1.52e-24 97.4
MsG0580028964.01.T01 AT5G59780 58.108 74 31 0 38 111 18 91 3.02e-24 97.1
MsG0580028964.01.T01 AT5G11510 44.762 105 57 1 7 111 79 182 6.43e-24 100
MsG0580028964.01.T01 AT5G11510 44.762 105 57 1 7 111 79 182 6.43e-24 100
MsG0580028964.01.T01 AT5G11510 44.762 105 57 1 7 111 79 182 6.43e-24 100
MsG0580028964.01.T01 AT3G46130 58.108 74 31 0 38 111 18 91 6.78e-24 96.7
MsG0580028964.01.T01 AT5G11510 44.762 105 57 1 7 111 79 182 8.47e-24 100
MsG0580028964.01.T01 AT5G11510 44.762 105 57 1 7 111 79 182 8.55e-24 100
MsG0580028964.01.T01 AT2G23290 45.098 102 55 1 9 110 13 113 2.02e-23 96.7
MsG0580028964.01.T01 AT3G46130 57.534 73 31 0 39 111 9 81 2.20e-23 95.1
MsG0580028964.01.T01 AT3G09370 45.192 104 56 1 7 110 133 235 2.57e-23 98.6
MsG0580028964.01.T01 AT3G09370 45.192 104 56 1 7 110 128 230 2.81e-23 98.6
MsG0580028964.01.T01 AT5G02320 44.762 105 57 1 7 111 125 228 2.82e-23 98.6
MsG0580028964.01.T01 AT5G02320 44.762 105 57 1 7 111 125 228 2.82e-23 98.6
MsG0580028964.01.T01 AT3G09370 45.192 104 56 1 7 110 141 243 2.96e-23 98.6
MsG0580028964.01.T01 AT5G02320 44.762 105 57 1 7 111 65 168 3.68e-23 98.2
MsG0580028964.01.T01 AT3G60460 43.269 104 58 1 7 109 11 114 4.60e-23 95.5
MsG0580028964.01.T01 AT4G37260 43.137 102 57 1 9 110 13 113 4.61e-23 95.9
MsG0580028964.01.T01 AT3G12820 54.286 70 32 0 43 112 2 71 8.65e-23 92.4
MsG0580028964.01.T01 AT1G69560 38.060 134 77 3 6 138 120 248 9.34e-23 95.5
MsG0580028964.01.T01 AT1G69560 38.060 134 77 3 6 138 104 232 1.00e-22 95.1
MsG0580028964.01.T01 AT3G55730 44.340 106 58 1 5 110 52 156 1.50e-22 95.5
MsG0580028964.01.T01 AT4G32730 42.342 111 55 2 7 113 85 190 1.84e-22 96.7
MsG0580028964.01.T01 AT4G32730 42.342 111 55 2 7 113 85 190 1.84e-22 96.7
MsG0580028964.01.T01 AT4G32730 42.342 111 55 2 7 113 85 190 1.84e-22 96.7
MsG0580028964.01.T01 AT4G32730 42.342 111 55 2 7 113 85 190 1.84e-22 96.7
MsG0580028964.01.T01 AT2G37630 41.379 116 60 2 12 125 7 116 1.88e-22 95.1
MsG0580028964.01.T01 AT4G32730 42.342 111 55 2 7 113 85 190 2.01e-22 96.3
MsG0580028964.01.T01 AT2G39880 44.340 106 50 2 9 110 50 150 3.57e-22 94.4
MsG0580028964.01.T01 AT5G14750 50.000 90 41 1 53 142 1 86 3.77e-22 89.4
MsG0580028964.01.T01 AT5G14750 50.000 90 41 1 53 142 1 86 3.77e-22 89.4
MsG0580028964.01.T01 AT5G67300 44.118 102 56 1 9 110 6 106 4.37e-22 93.2
MsG0580028964.01.T01 AT4G18770 42.202 109 54 2 7 111 215 318 9.16e-22 93.6
MsG0580028964.01.T01 AT1G26780 34.969 163 98 3 7 162 96 257 1.07e-21 91.7
MsG0580028964.01.T01 AT1G26780 34.969 163 98 3 7 162 96 257 1.08e-21 92.8
MsG0580028964.01.T01 AT1G22640 55.224 67 30 0 53 119 1 67 2.22e-21 89.0
MsG0580028964.01.T01 AT5G40350 44.565 92 51 0 40 131 5 96 5.52e-21 87.0
MsG0580028964.01.T01 AT3G50060 42.157 102 58 1 9 110 6 106 1.06e-20 89.4
MsG0580028964.01.T01 AT1G18960 40.777 103 58 2 9 111 10 109 1.65e-20 89.0
MsG0580028964.01.T01 AT3G27810 39.640 111 63 1 40 150 4 110 3.58e-20 85.1
MsG0580028964.01.T01 AT1G17950 40.196 102 60 1 9 110 5 105 4.82e-20 86.7
MsG0580028964.01.T01 AT3G27785 43.137 102 57 1 9 110 189 289 5.78e-20 88.6
MsG0580028964.01.T01 AT1G71030 49.315 73 37 0 45 117 4 76 6.34e-20 84.7
MsG0580028964.01.T01 AT1G71030 49.315 73 37 0 45 117 18 90 9.77e-20 84.3
MsG0580028964.01.T01 AT5G17800 36.441 118 74 1 3 120 87 203 1.08e-19 87.0
MsG0580028964.01.T01 AT5G58850 33.862 189 118 5 4 190 100 283 1.18e-19 87.8
MsG0580028964.01.T01 AT4G33450 37.864 103 63 1 8 110 18 119 9.51e-19 83.2
MsG0580028964.01.T01 AT1G73410 41.441 111 56 2 9 115 6 111 1.09e-18 82.8
MsG0580028964.01.T01 AT1G73410 41.441 111 56 2 9 115 6 111 1.38e-18 81.6
MsG0580028964.01.T01 AT5G11050 36.792 106 66 1 5 110 101 205 2.41e-18 84.0
MsG0580028964.01.T01 AT5G40360 40.777 103 60 1 7 109 156 257 4.86e-18 82.8
MsG0580028964.01.T01 AT3G23250 45.161 93 45 2 53 145 1 87 7.28e-18 80.1
MsG0580028964.01.T01 AT3G29020 30.657 137 92 2 4 138 60 195 6.53e-17 77.8
MsG0580028964.01.T01 AT3G29020 33.929 112 73 1 4 115 62 172 1.26e-16 78.2
MsG0580028964.01.T01 AT5G39700 35.965 114 72 1 2 115 49 161 1.40e-16 75.9
MsG0580028964.01.T01 AT2G25230 37.755 98 60 1 12 109 29 125 1.56e-15 73.9
MsG0580028964.01.T01 AT4G00540 38.889 108 62 2 7 111 101 207 1.64e-15 75.9
MsG0580028964.01.T01 AT4G00540 38.889 108 62 2 7 111 99 205 1.82e-15 75.9
MsG0580028964.01.T01 AT5G40430 34.951 103 65 2 7 109 52 152 1.91e-13 68.6
MsG0580028964.01.T01 AT1G14350 28.571 126 89 1 12 137 28 152 1.03e-12 67.8
MsG0580028964.01.T01 AT1G14350 28.571 126 89 1 12 137 28 152 1.03e-12 67.8
MsG0580028964.01.T01 AT2G02820 31.776 107 72 1 12 118 33 138 1.72e-12 66.6
MsG0580028964.01.T01 AT2G02820 31.776 107 72 1 12 118 33 138 1.98e-12 67.0
MsG0580028964.01.T01 AT2G02820 31.776 107 72 1 12 118 33 138 2.14e-12 66.6
MsG0580028964.01.T01 AT1G74650 65.854 41 14 0 72 112 1 41 3.28e-12 65.1
MsG0580028964.01.T01 AT3G28910 67.500 40 13 0 72 111 1 40 4.82e-12 64.3
MsG0580028964.01.T01 AT3G18100 30.769 156 89 4 5 155 494 635 7.71e-12 65.5
MsG0580028964.01.T01 AT3G18100 30.769 156 89 4 5 155 542 683 8.12e-12 65.5
MsG0580028964.01.T01 AT3G18100 30.769 156 89 4 5 155 329 470 1.18e-11 64.7
MsG0580028964.01.T01 AT3G18100 30.769 156 89 4 5 155 381 522 1.22e-11 64.7
MsG0580028964.01.T01 AT4G25560 32.540 126 73 3 65 187 2 118 2.54e-11 62.0

Find 47 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCTTTCTCTGTTGATATT+GGG 0.193067 5:+89686891 None:intergenic
CAAATGTTGATGACTTCTTT+TGG 0.209425 5:-89686261 MsG0580028964.01.T01:CDS
GTTCATTATACCTGTTCTTT+TGG 0.213130 5:+89688388 None:intergenic
GAAGAAGTTGAAAGAGTTAT+AGG 0.215598 5:+89686544 None:intergenic
AATGCTTTCTCTGTTGATAT+TGG 0.254863 5:+89686890 None:intergenic
GAATGTGGTCGGACAGTTTA+TGG 0.256836 5:-89686366 MsG0580028964.01.T01:CDS
TCTTTATTTAAATTCAATAT+TGG 0.268308 5:+89686505 None:intergenic
CAATCTCTACCAATTTGATT+TGG 0.311300 5:+89686436 None:intergenic
ACAAGTATGGTGAAGGAAAA+TGG 0.332221 5:-89688421 MsG0580028964.01.T01:CDS
ATTATGGTTCCAAATCAAAT+TGG 0.344731 5:-89686445 MsG0580028964.01.T01:CDS
TGATGGCTCATCAGAGATTA+TGG 0.349877 5:-89686461 MsG0580028964.01.T01:CDS
CAAGTAAACAGTGACAAAAT+TGG 0.354364 5:-89686331 MsG0580028964.01.T01:CDS
AGAAGAGAACAACTTTGATA+TGG 0.390818 5:-89686290 MsG0580028964.01.T01:CDS
CAAAAGAAGTCATCAACATT+TGG 0.398367 5:+89686262 None:intergenic
AAGGCTTACATTCACAAGTA+TGG 0.413593 5:-89688434 MsG0580028964.01.T01:CDS
GTCGGACAGTTTATGGAACT+TGG 0.426674 5:-89686359 MsG0580028964.01.T01:CDS
TGCTTTCTCTGTTGATATTG+GGG 0.446499 5:+89686892 None:intergenic
ACATCATTAGCTGTTCTACT+AGG 0.453688 5:+89686682 None:intergenic
GTTGAAAGAGTTATAGGTCG+AGG 0.455038 5:+89686550 None:intergenic
CATTTAATTCCCAAAAGAAC+AGG 0.464950 5:-89688398 MsG0580028964.01.T01:intron
TACACAATCTCCTAGGGAAT+AGG 0.470153 5:-89686836 MsG0580028964.01.T01:intron
TAAAGATAGTAAAATTATCA+TGG 0.479494 5:-89686488 MsG0580028964.01.T01:CDS
ACAAGGCTACACAATCTCCT+AGG 0.480777 5:-89686843 MsG0580028964.01.T01:CDS
GATCATATCAGCTTCATCTT+CGG 0.502741 5:+89686866 None:intergenic
TGCAATTGACAGGATTGAAT+AGG 0.503030 5:-89686956 MsG0580028964.01.T01:intron
AAAAGGTCCATGGACATATG+AGG 0.521159 5:-89688471 MsG0580028964.01.T01:CDS
CGACCACATTCCACATGGTA+CGG 0.521479 5:+89686378 None:intergenic
AATACCAGAGGTTTGAGAAA+AGG 0.525322 5:-89688488 MsG0580028964.01.T01:CDS
GAATACACATCTGCGGAAGA+AGG 0.540518 5:-89686647 MsG0580028964.01.T01:CDS
GACCACATTCCACATGGTAC+GGG 0.540744 5:+89686379 None:intergenic
TGGAAGCTTACCTATTCCCT+AGG 0.563710 5:+89686826 None:intergenic
TACATTCACAAGTATGGTGA+AGG 0.567911 5:-89688428 MsG0580028964.01.T01:CDS
TCTGCTTCACAACTAAGTCT+AGG 0.573391 5:-89686409 MsG0580028964.01.T01:CDS
TTGTCTTCCTCATATGTCCA+TGG 0.575291 5:+89688464 None:intergenic
AGAGAACAACTTTGATATGG+AGG 0.585265 5:-89686287 MsG0580028964.01.T01:CDS
GAGGTTTGAGAAAAGGTCCA+TGG 0.586834 5:-89688481 MsG0580028964.01.T01:CDS
CAAGGCTACACAATCTCCTA+GGG 0.605920 5:-89686842 MsG0580028964.01.T01:CDS
AAAATTATCATGGATCGTGA+TGG 0.613433 5:-89686478 MsG0580028964.01.T01:CDS
TGAGGAAGACAACTTACTCA+AGG 0.621512 5:-89688453 MsG0580028964.01.T01:CDS
CTGTCCGACCACATTCCACA+TGG 0.629677 5:+89686373 None:intergenic
CGTACCATGTGGAATGTGGT+CGG 0.646204 5:-89686377 MsG0580028964.01.T01:CDS
TTCCCGTACCATGTGGAATG+TGG 0.662970 5:-89686381 MsG0580028964.01.T01:CDS
ATGAAGCTGATATGATCACA+AGG 0.671254 5:-89686860 MsG0580028964.01.T01:CDS
GATGGTCATTGATTGCTGCA+AGG 0.678842 5:-89686708 MsG0580028964.01.T01:CDS
GGTAATGTTCCCGTACCATG+TGG 0.682093 5:-89686388 MsG0580028964.01.T01:CDS
ACTATTGGAATACACATCTG+CGG 0.687334 5:-89686654 MsG0580028964.01.T01:CDS
GTGCGTATGGAGAATACCAG+AGG 0.702990 5:-89688500 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAATACTATATATTTTTATA+TGG + Chr5:89687046-89687065 None:intergenic 10.0%
!!! TCTTTATTTAAATTCAATAT+TGG + Chr5:89688211-89688230 None:intergenic 10.0%
!! AAAGTAAATAAAATTATGCA+TGG + Chr5:89686423-89686442 None:intergenic 15.0%
!! AAATATTGATATATATAGCT+AGG + Chr5:89687929-89687948 None:intergenic 15.0%
!! AACATTCAAATTTATATGTA+CGG + Chr5:89686677-89686696 None:intergenic 15.0%
!! AAGTAAATAAAATTATGCAT+GGG + Chr5:89686422-89686441 None:intergenic 15.0%
!! ATATGCAAATATAATAAAAG+TGG - Chr5:89687223-89687242 MsG0580028964.01.T01:intron 15.0%
!! ATTTATACATATAATGTAGA+TGG - Chr5:89687987-89688006 MsG0580028964.01.T01:intron 15.0%
!! TAAAGATAGTAAAATTATCA+TGG - Chr5:89688225-89688244 MsG0580028964.01.T01:intron 15.0%
!! TATGCAAATATAATAAAAGT+GGG - Chr5:89687224-89687243 MsG0580028964.01.T01:intron 15.0%
!!! AACCTATATTTAATTCTTTT+TGG - Chr5:89687186-89687205 MsG0580028964.01.T01:intron 15.0%
!!! CACTTTTTTAATTAATAGTA+TGG - Chr5:89686702-89686721 MsG0580028964.01.T01:CDS 15.0%
!! AAAAACATAATAATCTGTGA+CGG + Chr5:89686456-89686475 None:intergenic 20.0%
!! CTCCAAAAAGAATTAAATAT+AGG + Chr5:89687191-89687210 None:intergenic 20.0%
!! TATACTAACTTATGTCTTTA+GGG + Chr5:89687167-89687186 None:intergenic 20.0%
!! TTATACTAACTTATGTCTTT+AGG + Chr5:89687168-89687187 None:intergenic 20.0%
!! TTTCTTAACATTTGTCTTAA+GGG + Chr5:89686825-89686844 None:intergenic 20.0%
!!! AGAAGATGAAAGATAAATTT+TGG + Chr5:89687123-89687142 None:intergenic 20.0%
!!! TTAACCAATTAATTTGCATT+TGG - Chr5:89687412-89687431 MsG0580028964.01.T01:intron 20.0%
! AAATGAAAAAGAGAGATCTA+AGG - Chr5:89688111-89688130 MsG0580028964.01.T01:intron 25.0%
! AACTCCAAATGCAAATTAAT+TGG + Chr5:89687419-89687438 None:intergenic 25.0%
! ATTATGGTTCCAAATCAAAT+TGG - Chr5:89688268-89688287 MsG0580028964.01.T01:intron 25.0%
! CAATATAAAGTTACTACTCT+TGG + Chr5:89686907-89686926 None:intergenic 25.0%
! CAGTTTGTGGTTAATTTATA+AGG + Chr5:89687466-89687485 None:intergenic 25.0%
! CTAATGATGTGAAAAACTAT+TGG - Chr5:89688044-89688063 MsG0580028964.01.T01:intron 25.0%
! GTTTCTTAACATTTGTCTTA+AGG + Chr5:89686826-89686845 None:intergenic 25.0%
! TATACATATATGCAATTGAC+AGG - Chr5:89687747-89687766 MsG0580028964.01.T01:intron 25.0%
! TATGAAATATCATACGAGAA+AGG - Chr5:89686790-89686809 MsG0580028964.01.T01:intron 25.0%
! TCAATTTAATTCAATCCGTT+TGG + Chr5:89686628-89686647 None:intergenic 25.0%
!! AGACAAACCCTTTTTATATT+TGG + Chr5:89686853-89686872 None:intergenic 25.0%
!! GACAAACCCTTTTTATATTT+GGG + Chr5:89686852-89686871 None:intergenic 25.0%
!! TTCATTATACCTGTTCTTTT+GGG + Chr5:89686327-89686346 None:intergenic 25.0%
!! TTTTGACAAATTTTTGCTAG+AGG - Chr5:89686473-89686492 MsG0580028964.01.T01:CDS 25.0%
!!! AAATGTTGATGACTTCTTTT+GGG - Chr5:89688453-89688472 MsG0580028964.01.T01:CDS 25.0%
!!! CATTGCTCTAATTTTTTAGT+GGG - Chr5:89686732-89686751 MsG0580028964.01.T01:intron 25.0%
AAAATTATCATGGATCGTGA+TGG - Chr5:89688235-89688254 MsG0580028964.01.T01:intron 30.0%
AAACCCACCCAAATATAAAA+AGG - Chr5:89686842-89686861 MsG0580028964.01.T01:CDS 30.0%
AACCCACCCAAATATAAAAA+GGG - Chr5:89686843-89686862 MsG0580028964.01.T01:CDS 30.0%
AATATAAGCACTCCTAACAT+TGG + Chr5:89686605-89686624 None:intergenic 30.0%
AATGCTTTCTCTGTTGATAT+TGG + Chr5:89687826-89687845 None:intergenic 30.0%
AGAAGAGAACAACTTTGATA+TGG - Chr5:89688423-89688442 MsG0580028964.01.T01:CDS 30.0%
ATCTTCTGTTTGGTATTAGT+TGG + Chr5:89687594-89687613 None:intergenic 30.0%
ATGCTTTCTCTGTTGATATT+GGG + Chr5:89687825-89687844 None:intergenic 30.0%
CAAAAGAAGTCATCAACATT+TGG + Chr5:89688454-89688473 None:intergenic 30.0%
CAAGTAAACAGTGACAAAAT+TGG - Chr5:89688382-89688401 MsG0580028964.01.T01:intron 30.0%
CAATCTCTACCAATTTGATT+TGG + Chr5:89688280-89688299 None:intergenic 30.0%
CATTTAATTCCCAAAAGAAC+AGG - Chr5:89686315-89686334 MsG0580028964.01.T01:CDS 30.0%
GAAGAAGTTGAAAGAGTTAT+AGG + Chr5:89688172-89688191 None:intergenic 30.0%
GTGGGTCATGTTTATATTAT+GGG + Chr5:89687344-89687363 None:intergenic 30.0%
TATATGTACTCATAGAGAGT+AGG + Chr5:89687304-89687323 None:intergenic 30.0%
TCTCTATGAGTACATATAAG+AGG - Chr5:89687306-89687325 MsG0580028964.01.T01:intron 30.0%
TGCATGTAGTCAAAGAAAAA+GGG + Chr5:89687366-89687385 None:intergenic 30.0%
TTGCATGTAGTCAAAGAAAA+AGG + Chr5:89687367-89687386 None:intergenic 30.0%
! AAACCCTTTTTATATTTGGG+TGG + Chr5:89686849-89686868 None:intergenic 30.0%
! AACCCTTTTTATATTTGGGT+GGG + Chr5:89686848-89686867 None:intergenic 30.0%
! CAAAGACAAATTTTTCCTAG+AGG - Chr5:89686518-89686537 MsG0580028964.01.T01:CDS 30.0%
! CTCTAGGAAAAATTTGTCTT+TGG + Chr5:89686520-89686539 None:intergenic 30.0%
! GAAAAAGTACATCCAATGTT+AGG - Chr5:89686590-89686609 MsG0580028964.01.T01:CDS 30.0%
! GTAGTTTTTCATCTTCTGTT+TGG + Chr5:89687604-89687623 None:intergenic 30.0%
! GTTCATTATACCTGTTCTTT+TGG + Chr5:89686328-89686347 None:intergenic 30.0%
!! TTCTTCCTTTAGTTCTTAAC+TGG - Chr5:89687139-89687158 MsG0580028964.01.T01:intron 30.0%
!!! CAAATGTTGATGACTTCTTT+TGG - Chr5:89688452-89688471 MsG0580028964.01.T01:CDS 30.0%
!!! CTTTTGAAAATGTCGTTTTC+TGG - Chr5:89687440-89687459 MsG0580028964.01.T01:intron 30.0%
!!! GCATTGCTCTAATTTTTTAG+TGG - Chr5:89686731-89686750 MsG0580028964.01.T01:intron 30.0%
AAAAAGCTGTAGATTGAGGT+GGG - Chr5:89687785-89687804 MsG0580028964.01.T01:intron 35.0%
AAGGCTTACATTCACAAGTA+TGG - Chr5:89686279-89686298 MsG0580028964.01.T01:CDS 35.0%
AATACCAGAGGTTTGAGAAA+AGG - Chr5:89686225-89686244 MsG0580028964.01.T01:CDS 35.0%
ACAAGTATGGTGAAGGAAAA+TGG - Chr5:89686292-89686311 MsG0580028964.01.T01:CDS 35.0%
ACATCATTAGCTGTTCTACT+AGG + Chr5:89688034-89688053 None:intergenic 35.0%
ACTATTGGAATACACATCTG+CGG - Chr5:89688059-89688078 MsG0580028964.01.T01:intron 35.0%
AGAGAACAACTTTGATATGG+AGG - Chr5:89688426-89688445 MsG0580028964.01.T01:CDS 35.0%
ATGAAGCTGATATGATCACA+AGG - Chr5:89687853-89687872 MsG0580028964.01.T01:intron 35.0%
ATGTAGTCAAAGAAAAAGGG+TGG + Chr5:89687363-89687382 None:intergenic 35.0%
CAAAACAGCGAAAATCCAAA+AGG - Chr5:89687528-89687547 MsG0580028964.01.T01:intron 35.0%
GATCATATCAGCTTCATCTT+CGG + Chr5:89687850-89687869 None:intergenic 35.0%
GGTCATGTTTATATTATGGG+TGG + Chr5:89687341-89687360 None:intergenic 35.0%
GGTGGGTCATGTTTATATTA+TGG + Chr5:89687345-89687364 None:intergenic 35.0%
GTGCAATATTGCACATGTTA+AGG - Chr5:89686878-89686897 MsG0580028964.01.T01:CDS 35.0%
TACATTCACAAGTATGGTGA+AGG - Chr5:89686285-89686304 MsG0580028964.01.T01:CDS 35.0%
TGCAATTGACAGGATTGAAT+AGG - Chr5:89687757-89687776 MsG0580028964.01.T01:intron 35.0%
TGCTTTCTCTGTTGATATTG+GGG + Chr5:89687824-89687843 None:intergenic 35.0%
TGTAGTCAAAGAAAAAGGGT+GGG + Chr5:89687362-89687381 None:intergenic 35.0%
! ACCTCAATCTACAGCTTTTT+CGG + Chr5:89687785-89687804 None:intergenic 35.0%
! CAAATTTTTCCTCCTCCTTT+TGG + Chr5:89687546-89687565 None:intergenic 35.0%
!! AGGAGTGCTTATATTCCAAA+CGG - Chr5:89686610-89686629 MsG0580028964.01.T01:CDS 35.0%
!!! ATTCTTTTTGGAGCAGCAAA+AGG - Chr5:89687198-89687217 MsG0580028964.01.T01:intron 35.0%
!!! TTTTCGCTGTTTTGTTTTCG+AGG + Chr5:89687522-89687541 None:intergenic 35.0%
AAAAGGTCCATGGACATATG+AGG - Chr5:89686242-89686261 MsG0580028964.01.T01:CDS 40.0%
AACAGCGAAAATCCAAAAGG+AGG - Chr5:89687531-89687550 MsG0580028964.01.T01:intron 40.0%
ATGTACTCATAGAGAGTAGG+AGG + Chr5:89687301-89687320 None:intergenic 40.0%
CTGTTTGGTATTAGTTGGCT+AGG + Chr5:89687589-89687608 None:intergenic 40.0%
GAAAAAGCTGTAGATTGAGG+TGG - Chr5:89687784-89687803 MsG0580028964.01.T01:intron 40.0%
GTTGAAAGAGTTATAGGTCG+AGG + Chr5:89688166-89688185 None:intergenic 40.0%
TACACAATCTCCTAGGGAAT+AGG - Chr5:89687877-89687896 MsG0580028964.01.T01:intron 40.0%
TCTGCTTCACAACTAAGTCT+AGG - Chr5:89688304-89688323 MsG0580028964.01.T01:intron 40.0%
TGAGGAAGACAACTTACTCA+AGG - Chr5:89686260-89686279 MsG0580028964.01.T01:CDS 40.0%
TGATGGCTCATCAGAGATTA+TGG - Chr5:89688252-89688271 MsG0580028964.01.T01:intron 40.0%
TTGTCTTCCTCATATGTCCA+TGG + Chr5:89686252-89686271 None:intergenic 40.0%
! TGTACGGTTCGATGTTGATT+TGG + Chr5:89686661-89686680 None:intergenic 40.0%
!! AGGGAAAATGAGGTTGGTAT+TGG + Chr5:89687498-89687517 None:intergenic 40.0%
!! TTTTCGAGGAAGGGAAAATG+AGG + Chr5:89687508-89687527 None:intergenic 40.0%
!!! GCTGTTTTGTTTTCGAGGAA+GGG + Chr5:89687517-89687536 None:intergenic 40.0%
ACAAGGCTACACAATCTCCT+AGG - Chr5:89687870-89687889 MsG0580028964.01.T01:intron 45.0%
AGCGAAAATCCAAAAGGAGG+AGG - Chr5:89687534-89687553 MsG0580028964.01.T01:intron 45.0%
AGGGAATAGGTAAGCTTCCA+AGG - Chr5:89687890-89687909 MsG0580028964.01.T01:intron 45.0%
CAAGGCTACACAATCTCCTA+GGG - Chr5:89687871-89687890 MsG0580028964.01.T01:intron 45.0%
GAATACACATCTGCGGAAGA+AGG - Chr5:89688066-89688085 MsG0580028964.01.T01:intron 45.0%
GAATGTGGTCGGACAGTTTA+TGG - Chr5:89688347-89688366 MsG0580028964.01.T01:intron 45.0%
GAGGTTTGAGAAAAGGTCCA+TGG - Chr5:89686232-89686251 MsG0580028964.01.T01:CDS 45.0%
GCCGAAAAAGCTGTAGATTG+AGG - Chr5:89687781-89687800 MsG0580028964.01.T01:intron 45.0%
GGGAATAGGTAAGCTTCCAA+GGG - Chr5:89687891-89687910 MsG0580028964.01.T01:intron 45.0%
GGGCACCAGTTAAGAACTAA+AGG + Chr5:89687147-89687166 None:intergenic 45.0%
GTCGGACAGTTTATGGAACT+TGG - Chr5:89688354-89688373 MsG0580028964.01.T01:intron 45.0%
TGGAAGCTTACCTATTCCCT+AGG + Chr5:89687890-89687909 None:intergenic 45.0%
TGGTATTAGTTGGCTAGGTG+TGG + Chr5:89687584-89687603 None:intergenic 45.0%
TTGCGTATGAGCTTACCTCT+AGG + Chr5:89686536-89686555 None:intergenic 45.0%
! GATGGTCATTGATTGCTGCA+AGG - Chr5:89688005-89688024 MsG0580028964.01.T01:intron 45.0%
! TGGACCTTTTCTCAAACCTC+TGG + Chr5:89686232-89686251 None:intergenic 45.0%
!! CATAGAGAGTAGGAGGTGTT+AGG + Chr5:89687294-89687313 None:intergenic 45.0%
!! TTGGCTTTGCATGCAGTTTG+TGG + Chr5:89687479-89687498 None:intergenic 45.0%
!!! CGCTGTTTTGTTTTCGAGGA+AGG + Chr5:89687518-89687537 None:intergenic 45.0%
!! AAAAAAAAAAAAAAAAACAT+TGG + Chr5:89686565-89686584 None:intergenic 5.0%
!!! AATACTATATATTTTTATAT+GGG + Chr5:89687045-89687064 None:intergenic 5.0%
CGACCACATTCCACATGGTA+CGG + Chr5:89688338-89688357 None:intergenic 50.0%
CGAGGAAGGGAAAATGAGGT+TGG + Chr5:89687504-89687523 None:intergenic 50.0%
CGTACCATGTGGAATGTGGT+CGG - Chr5:89688336-89688355 MsG0580028964.01.T01:intron 50.0%
GACCACATTCCACATGGTAC+GGG + Chr5:89688337-89688356 None:intergenic 50.0%
GGTAATGTTCCCGTACCATG+TGG - Chr5:89688325-89688344 MsG0580028964.01.T01:intron 50.0%
TAGGCTACATGCATTGCCCT+TGG + Chr5:89687910-89687929 None:intergenic 50.0%
TTCCCGTACCATGTGGAATG+TGG - Chr5:89688332-89688351 MsG0580028964.01.T01:intron 50.0%
!! GAGTAGGAGGTGTTAGGTTG+TGG + Chr5:89687288-89687307 None:intergenic 50.0%
CTGTCCGACCACATTCCACA+TGG + Chr5:89688343-89688362 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 89686219 89688516 89686219 ID=MsG0580028964.01;Name=MsG0580028964.01
Chr5 mRNA 89686219 89688516 89686219 ID=MsG0580028964.01.T01;Parent=MsG0580028964.01;Name=MsG0580028964.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0|0|1|1|1|3|0|252
Chr5 exon 89688399 89688516 89688399 ID=MsG0580028964.01.T01:exon:17534;Parent=MsG0580028964.01.T01
Chr5 exon 89686837 89686966 89686837 ID=MsG0580028964.01.T01:exon:17533;Parent=MsG0580028964.01.T01
Chr5 exon 89686219 89686729 89686219 ID=MsG0580028964.01.T01:exon:17532;Parent=MsG0580028964.01.T01
Chr5 CDS 89688399 89688516 89688399 ID=MsG0580028964.01.T01:cds;Parent=MsG0580028964.01.T01
Chr5 CDS 89686837 89686966 89686837 ID=MsG0580028964.01.T01:cds;Parent=MsG0580028964.01.T01
Chr5 CDS 89686219 89686729 89686219 ID=MsG0580028964.01.T01:cds;Parent=MsG0580028964.01.T01
Gene Sequence

>MsG0580028964.01.T01

ATGGAGAATACCAGAGGTTTGAGAAAAGGTCCATGGACATATGAGGAAGACAACTTACTCAAGGCTTACATTCACAAGTATGGTGAAGGAAAATGGCATTTAATTCCCAAAAGAACAGGATTGAATAGGTGCCGAAAAAGCTGTAGATTGAGGTGGGTAAATTATTTAAACCCCAATATCAACAGAGAAAGCATTACCGAAGATGAAGCTGATATGATCACAAGGCTACACAATCTCCTAGGGAATAGATGGTCATTGATTGCTGCAAGGCTTCCTAGTAGAACAGCTAATGATGTGAAAAACTATTGGAATACACATCTGCGGAAGAAGGTTCTTTCAGCATCATTAGAAAAAAATGAAAAAGAGAGATCTAAGGAAACAATGAAAGCTCATGAAGTTATTAAACCTCGACCTATAACTCTTTCAACTTCTTCATCTTTCATGACACAACCAATATTGAATTTAAATAAAGATAGTAAAATTATCATGGATCGTGATGGCTCATCAGAGATTATGGTTCCAAATCAAATTGGTAGAGATTGTGCTTCTGCTTCACAACTAAGTCTAGGTAATGTTCCCGTACCATGTGGAATGTGGTCGGACAGTTTATGGAACTTGGAAGAACAAGTAAACAGTGACAAAATTGGCTCATGCTCTTCACTACAAGAAGAGAACAACTTTGATATGGAGGTTCCAAATGTTGATGACTTCTTTTGGGATTTCAAGCTTGATGATTTTGATTTTCTTATGAATCTTTAA
Protein sequence

>MsG0580028964.01.T01

MENTRGLRKGPWTYEEDNLLKAYIHKYGEGKWHLIPKRTGLNRCRKSCRLRWVNYLNPNINRESITEDEADMITRLHNLLGNRWSLIAARLPSRTANDVKNYWNTHLRKKVLSASLEKNEKERSKETMKAHEVIKPRPITLSTSSSFMTQPILNLNKDSKIIMDRDGSSEIMVPNQIGRDCASASQLSLGNVPVPCGMWSDSLWNLEEQVNSDKIGSCSSLQEENNFDMEVPNVDDFFWDFKLDDFDFLMNL*