AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028977.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028977.01.T01 MTR_5g079220 94.203 276 16 0 1 276 1 276 0.0 513
MsG0580028977.01.T01 MTR_5g079290 64.751 261 74 6 18 270 14 264 2.77e-106 309
MsG0580028977.01.T01 MTR_5g078800 65.019 263 76 7 17 269 3 259 8.04e-104 303
MsG0580028977.01.T01 MTR_0001s0360 62.934 259 80 8 19 272 5 252 5.22e-101 295
MsG0580028977.01.T01 MTR_7g017260 57.455 275 93 7 9 272 13 274 8.80e-100 293
MsG0580028977.01.T01 MTR_5g078860 55.667 300 83 7 17 268 3 300 7.24e-95 282
MsG0580028977.01.T01 MTR_5g078950 57.721 272 86 7 18 270 4 265 4.12e-93 276
MsG0580028977.01.T01 MTR_5g079120 55.235 277 99 6 5 272 45 305 2.26e-92 275
MsG0580028977.01.T01 MTR_5g078910 54.575 306 79 7 17 272 3 298 1.05e-91 273
MsG0580028977.01.T01 MTR_5g078930 65.686 204 58 4 13 212 3 198 1.26e-88 263
MsG0580028977.01.T01 MTR_8g060940 57.414 263 80 6 18 272 4 242 2.53e-81 245
MsG0580028977.01.T01 MTR_0193s0090 57.071 198 71 3 16 212 2 186 1.90e-72 221
MsG0580028977.01.T01 MTR_0247s0040 61.170 188 63 1 16 203 2 179 4.13e-71 217
MsG0580028977.01.T01 MTR_0197s0010 62.963 135 46 1 25 159 5 135 5.84e-57 182
MsG0580028977.01.T01 MTR_4g125520 56.115 139 61 0 20 158 11 149 2.74e-50 168
MsG0580028977.01.T01 MTR_3g083540 60.550 109 43 0 20 128 40 148 1.49e-45 155
MsG0580028977.01.T01 MTR_7g115650 62.264 106 40 0 20 125 11 116 4.78e-45 151
MsG0580028977.01.T01 MTR_4g100720 62.609 115 42 1 21 135 13 126 1.69e-44 149
MsG0580028977.01.T01 MTR_0023s0210 82.500 80 14 0 18 97 4 83 1.83e-43 143
MsG0580028977.01.T01 MTR_1g076150 54.918 122 53 1 20 139 11 132 2.47e-43 148
MsG0580028977.01.T01 MTR_8g027345 62.264 106 40 0 20 125 11 116 3.87e-43 149
MsG0580028977.01.T01 MTR_0251s0050 54.074 135 56 2 17 147 9 141 1.13e-42 147
MsG0580028977.01.T01 MTR_7g117730 57.658 111 47 0 20 130 11 121 1.29e-42 146
MsG0580028977.01.T01 MTR_0008s0470 52.143 140 62 2 17 151 9 148 2.40e-42 147
MsG0580028977.01.T01 MTR_5g079670 59.434 106 43 0 21 126 11 116 3.64e-42 144
MsG0580028977.01.T01 MTR_2g089450 51.852 135 64 1 20 153 11 145 8.11e-42 144
MsG0580028977.01.T01 MTR_3g097450 50.746 134 66 0 23 156 14 147 8.15e-42 145
MsG0580028977.01.T01 MTR_0008s0390 56.667 120 48 1 17 132 9 128 1.31e-41 144
MsG0580028977.01.T01 MTR_1g043050 55.856 111 49 0 19 129 10 120 1.34e-41 144
MsG0580028977.01.T01 MTR_7g096930 55.085 118 53 0 20 137 11 128 1.97e-41 144
MsG0580028977.01.T01 MTR_1g043080 55.556 108 48 0 19 126 10 117 2.47e-41 143
MsG0580028977.01.T01 MTR_8g020490 62.857 105 39 0 21 125 8 112 3.54e-41 142
MsG0580028977.01.T01 MTR_4g091490 58.182 110 46 0 17 126 9 118 4.13e-41 145
MsG0580028977.01.T01 MTR_4g073420 46.012 163 77 2 23 185 14 165 6.31e-41 143
MsG0580028977.01.T01 MTR_2g011660 58.182 110 46 0 17 126 9 118 7.92e-41 144
MsG0580028977.01.T01 MTR_3g074520 57.944 107 45 0 20 126 11 117 2.30e-40 143
MsG0580028977.01.T01 MTR_5g007370 57.009 107 46 0 20 126 11 117 3.35e-40 141
MsG0580028977.01.T01 MTR_1g100653 52.000 125 60 0 20 144 11 135 4.75e-40 141
MsG0580028977.01.T01 MTR_2g089420 47.059 136 72 0 20 155 10 145 1.01e-39 144
MsG0580028977.01.T01 MTR_4g082290 55.372 121 53 1 20 140 11 130 3.65e-39 141
MsG0580028977.01.T01 MTR_4g478180 56.075 107 47 0 20 126 12 118 3.87e-39 140
MsG0580028977.01.T01 MTR_7g010210 57.547 106 45 0 20 125 11 116 4.74e-39 139
MsG0580028977.01.T01 MTR_4g485530 57.547 106 45 0 23 128 14 119 5.04e-39 135
MsG0580028977.01.T01 MTR_4g121460 45.033 151 81 1 20 168 11 161 6.16e-39 139
MsG0580028977.01.T01 MTR_7g010210 57.547 106 45 0 20 125 11 116 6.22e-39 137
MsG0580028977.01.T01 MTR_4g082230 55.833 120 52 1 21 140 12 130 7.11e-39 140
MsG0580028977.01.T01 MTR_2g034790 48.837 129 66 0 20 148 11 139 7.59e-39 139
MsG0580028977.01.T01 MTR_2g089620 57.944 107 45 0 20 126 11 117 1.17e-38 138
MsG0580028977.01.T01 MTR_3g039990 52.846 123 58 0 20 142 12 134 1.31e-38 137
MsG0580028977.01.T01 MTR_7g011170 57.009 107 46 0 20 126 11 117 5.07e-38 136
MsG0580028977.01.T01 MTR_5g029840 56.075 107 47 0 20 126 11 117 1.29e-37 135
MsG0580028977.01.T01 MTR_0140s0030 56.604 106 46 0 20 125 12 117 2.59e-37 135
MsG0580028977.01.T01 MTR_0489s0020 56.604 106 46 0 20 125 12 117 2.59e-37 135
MsG0580028977.01.T01 MTR_0008s0280 54.808 104 47 0 20 123 11 114 3.24e-37 132
MsG0580028977.01.T01 MTR_6g012690 57.009 107 46 0 20 126 11 117 6.97e-37 134
MsG0580028977.01.T01 MTR_7g110830 57.143 105 45 0 21 125 12 116 7.30e-37 134
MsG0580028977.01.T01 MTR_4g105130 47.826 138 57 1 21 143 12 149 1.03e-36 134
MsG0580028977.01.T01 MTR_7g087130 55.660 106 47 0 20 125 11 116 1.33e-36 133
MsG0580028977.01.T01 MTR_7g076740 45.390 141 75 2 19 158 10 149 1.42e-36 132
MsG0580028977.01.T01 MTR_1g085640 57.143 105 45 0 21 125 12 116 1.88e-36 134
MsG0580028977.01.T01 MTR_8g095390 52.830 106 50 0 23 128 14 119 3.16e-36 131
MsG0580028977.01.T01 MTR_5g014990 51.304 115 55 1 21 134 12 126 3.64e-36 131
MsG0580028977.01.T01 MTR_0063s0090 52.427 103 49 0 20 122 11 113 5.80e-36 128
MsG0580028977.01.T01 MTR_1g112760 44.595 148 64 2 21 153 13 157 1.02e-35 128
MsG0580028977.01.T01 MTR_6g009430 53.774 106 49 0 21 126 12 117 1.05e-35 130
MsG0580028977.01.T01 MTR_1g100667 52.542 118 55 1 13 130 6 122 1.10e-35 129
MsG0580028977.01.T01 MTR_1g085040 56.190 105 46 0 21 125 12 116 1.39e-35 131
MsG0580028977.01.T01 MTR_3g461490 54.286 105 48 0 21 125 12 116 1.75e-35 130
MsG0580028977.01.T01 MTR_6g012180 57.426 101 43 0 20 120 11 111 1.85e-35 129
MsG0580028977.01.T01 MTR_8g031360 53.704 108 49 1 20 126 12 119 2.16e-35 129
MsG0580028977.01.T01 MTR_3g077110 52.212 113 54 0 16 128 7 119 2.75e-35 130
MsG0580028977.01.T01 MTR_6g055910 51.282 117 57 0 14 130 7 123 4.12e-35 127
MsG0580028977.01.T01 MTR_1g017140 48.718 117 59 1 21 136 12 128 6.48e-35 129
MsG0580028977.01.T01 MTR_5g079140 54.622 119 44 3 98 212 7 119 1.04e-34 122
MsG0580028977.01.T01 MTR_3g103570 52.174 115 52 2 21 132 12 126 1.56e-34 127
MsG0580028977.01.T01 MTR_8g017440 51.818 110 53 0 19 128 10 119 2.69e-34 127
MsG0580028977.01.T01 MTR_7g111290 60.204 98 39 0 21 118 12 109 2.94e-34 127
MsG0580028977.01.T01 MTR_5g042030 49.194 124 62 1 16 139 2 124 3.05e-34 125
MsG0580028977.01.T01 MTR_4g102380 53.271 107 50 0 20 126 11 117 3.13e-34 125
MsG0580028977.01.T01 MTR_2g097910 53.333 105 49 0 21 125 20 124 3.61e-34 126
MsG0580028977.01.T01 MTR_2g099740 48.718 117 60 0 12 128 3 119 3.68e-34 128
MsG0580028977.01.T01 MTR_8g017540 43.137 153 68 3 12 163 49 183 4.26e-34 127
MsG0580028977.01.T01 MTR_3g028740 50.400 125 57 3 2 125 6 126 4.28e-34 126
MsG0580028977.01.T01 MTR_6g090405 53.704 108 49 1 21 127 12 119 5.37e-34 124
MsG0580028977.01.T01 MTR_4g065017 54.286 105 48 0 21 125 17 121 6.48e-34 125
MsG0580028977.01.T01 MTR_1g017000 50.000 108 53 1 21 127 12 119 8.14e-34 123
MsG0580028977.01.T01 MTR_1g110460 55.340 103 46 0 21 123 26 128 1.01e-33 125
MsG0580028977.01.T01 MTR_4g097570 37.500 192 109 5 21 201 12 203 1.17e-33 124
MsG0580028977.01.T01 MTR_8g017500 50.909 110 54 0 19 128 10 119 1.84e-33 125
MsG0580028977.01.T01 MTR_3g065440 55.660 106 47 0 20 125 11 116 2.82e-33 124
MsG0580028977.01.T01 MTR_4g057635 51.818 110 52 1 21 129 12 121 3.79e-33 123
MsG0580028977.01.T01 MTR_5g078140 54.717 106 48 0 20 125 11 116 5.54e-33 123
MsG0580028977.01.T01 MTR_7g102110 52.778 108 50 1 21 127 12 119 6.47e-33 122
MsG0580028977.01.T01 MTR_1g073170 54.902 102 46 0 22 123 21 122 8.35e-33 121
MsG0580028977.01.T01 MTR_2g095520 57.000 100 42 1 21 119 12 111 1.05e-32 122
MsG0580028977.01.T01 MTR_8g098860 50.476 105 52 0 21 125 12 116 1.18e-32 122
MsG0580028977.01.T01 MTR_2g067420 51.000 100 49 0 21 120 14 113 1.90e-32 122
MsG0580028977.01.T01 MTR_2g064160 48.148 108 56 0 21 128 11 118 2.15e-32 121
MsG0580028977.01.T01 MTR_3g011610 50.485 103 51 0 21 123 37 139 2.68e-32 124
MsG0580028977.01.T01 MTR_4g097570 37.306 193 109 6 21 201 12 204 4.55e-32 120
MsG0580028977.01.T01 MTR_8g017390 51.852 108 51 1 21 127 12 119 6.72e-32 123
MsG0580028977.01.T01 MTR_7g035075 46.400 125 62 1 16 140 9 128 9.42e-32 117
MsG0580028977.01.T01 MTR_7g109320 51.852 108 52 0 20 127 11 118 1.21e-31 120
MsG0580028977.01.T01 MTR_1g045610 53.922 102 47 0 22 123 22 123 1.23e-31 118
MsG0580028977.01.T01 MTR_4g128670 55.000 100 44 1 21 119 12 111 1.41e-31 120
MsG0580028977.01.T01 MTR_3g052430 49.515 103 52 0 21 123 41 143 2.08e-31 122
MsG0580028977.01.T01 MTR_8g017340 48.305 118 60 1 11 127 2 119 2.38e-31 121
MsG0580028977.01.T01 MTR_3g052450 49.515 103 52 0 21 123 40 142 2.62e-31 122
MsG0580028977.01.T01 MTR_0023s0260 46.857 175 77 7 105 272 10 175 2.64e-31 115
MsG0580028977.01.T01 MTR_5g010020 48.148 108 56 0 12 119 3 110 3.44e-31 119
MsG0580028977.01.T01 MTR_6g006030 49.091 110 56 0 16 125 9 118 8.14e-31 114
MsG0580028977.01.T01 MTR_4g063100 47.321 112 56 1 22 133 8 116 8.65e-31 115
MsG0580028977.01.T01 MTR_1g086510 42.138 159 81 3 15 166 15 169 1.15e-30 115
MsG0580028977.01.T01 MTR_1g086530 46.610 118 63 0 6 123 18 135 1.22e-30 115
MsG0580028977.01.T01 MTR_1g062940 48.649 111 57 0 21 131 6 116 1.36e-30 114
MsG0580028977.01.T01 MTR_2g096380 46.789 109 58 0 21 129 6 114 1.42e-30 114
MsG0580028977.01.T01 MTR_8g017350 47.458 118 61 1 11 127 2 119 1.45e-30 120
MsG0580028977.01.T01 MTR_8g042410 48.544 103 53 0 21 123 37 139 4.96e-30 118
MsG0580028977.01.T01 MTR_1g021230 49.515 103 52 0 21 123 57 159 1.41e-29 116
MsG0580028977.01.T01 MTR_2g088170 49.038 104 53 0 20 123 28 131 4.66e-29 115
MsG0580028977.01.T01 MTR_1g083630 48.148 108 56 0 16 123 7 114 8.39e-29 115
MsG0580028977.01.T01 MTR_5g062790 43.750 112 62 1 13 123 1 112 4.01e-27 107
MsG0580028977.01.T01 MTR_2g033170 51.923 104 50 0 21 124 24 127 6.27e-27 107
MsG0580028977.01.T01 MTR_5g007300 58.974 78 32 0 20 97 63 140 6.98e-27 102
MsG0580028977.01.T01 MTR_5g088080 45.631 103 55 1 22 123 13 115 9.78e-27 105
MsG0580028977.01.T01 MTR_5g088150 45.631 103 55 1 22 123 13 115 9.78e-27 105
MsG0580028977.01.T01 MTR_5g488210 45.631 103 55 1 22 123 13 115 9.78e-27 105
MsG0580028977.01.T01 MTR_5g088640 45.631 103 55 1 22 123 13 115 1.22e-26 105
MsG0580028977.01.T01 MTR_5g488170 45.631 103 55 1 22 123 13 115 1.35e-26 104
MsG0580028977.01.T01 MTR_5g049190 40.833 120 70 1 9 128 5 123 4.86e-26 102
MsG0580028977.01.T01 MTR_4g123040 51.456 103 50 0 21 123 24 126 1.43e-25 103
MsG0580028977.01.T01 MTR_6g055910 55.844 77 34 0 54 130 18 94 1.30e-24 99.4
MsG0580028977.01.T01 MTR_5g088610 41.964 112 64 1 13 123 1 112 1.65e-24 101
MsG0580028977.01.T01 MTR_3g045430 40.367 109 65 0 17 125 9 117 2.00e-24 99.8
MsG0580028977.01.T01 MTR_5g070020 39.231 130 75 2 5 134 107 232 2.45e-24 100
MsG0580028977.01.T01 MTR_3g463400 38.931 131 77 2 14 142 124 253 2.53e-24 101
MsG0580028977.01.T01 MTR_4g019370 40.741 108 63 1 23 130 38 144 6.77e-24 99.4
MsG0580028977.01.T01 MTR_5g041570 40.708 113 61 2 23 135 134 240 1.27e-23 99.8
MsG0580028977.01.T01 MTR_4g094982 43.564 101 56 1 23 123 5 104 1.70e-23 97.1
MsG0580028977.01.T01 MTR_4g082040 42.574 101 57 1 23 123 105 204 1.94e-23 99.0
MsG0580028977.01.T01 MTR_7g111290 63.636 66 24 0 53 118 2 67 2.61e-23 97.4
MsG0580028977.01.T01 MTR_6g074860 43.299 97 54 1 23 119 4 99 2.66e-23 95.5
MsG0580028977.01.T01 MTR_7g037260 42.056 107 61 1 23 129 145 250 3.93e-23 97.4
MsG0580028977.01.T01 MTR_5g016510 36.508 126 79 1 23 148 5 129 4.48e-23 96.7
MsG0580028977.01.T01 MTR_3g101290 44.554 101 55 1 23 123 37 136 5.49e-23 94.4
MsG0580028977.01.T01 MTR_4g128190 42.991 107 47 2 18 123 8 101 9.68e-23 94.0
MsG0580028977.01.T01 MTR_4g063100 53.086 81 35 1 53 133 10 87 1.13e-22 93.6
MsG0580028977.01.T01 MTR_3g089045 38.889 126 71 2 18 143 11 130 1.43e-22 94.7
MsG0580028977.01.T01 MTR_3g077650 41.964 112 62 2 23 133 181 290 1.65e-22 96.7
MsG0580028977.01.T01 MTR_8g006470 40.909 110 64 1 15 123 4 113 1.72e-22 94.4
MsG0580028977.01.T01 MTR_1g026870 40.187 107 63 1 21 127 83 188 2.01e-22 97.1
MsG0580028977.01.T01 MTR_2g096380 38.971 136 69 2 53 188 19 140 2.12e-22 92.8
MsG0580028977.01.T01 MTR_3g110028 40.187 107 63 1 21 127 83 188 2.71e-22 96.7
MsG0580028977.01.T01 MTR_4g029540 42.609 115 63 3 13 125 1 114 5.15e-22 93.2
MsG0580028977.01.T01 MTR_7g086960 44.554 101 55 1 23 123 89 188 7.80e-22 94.0
MsG0580028977.01.T01 MTR_4g105660 41.121 107 60 2 23 128 180 284 1.28e-21 94.0
MsG0580028977.01.T01 MTR_7g061330 40.952 105 61 1 21 125 111 214 6.26e-21 92.4
MsG0580028977.01.T01 MTR_7g061330 32.692 104 68 2 23 125 61 163 9.33e-12 65.5
MsG0580028977.01.T01 MTR_7g461410 40.952 105 61 1 21 125 111 214 6.26e-21 92.4
MsG0580028977.01.T01 MTR_7g461410 32.692 104 68 2 23 125 61 163 9.33e-12 65.5
MsG0580028977.01.T01 MTR_1g057980 39.831 118 67 2 8 122 62 178 9.09e-21 90.1
MsG0580028977.01.T01 MTR_6g027340 42.268 97 55 1 23 119 16 111 9.88e-21 87.8
MsG0580028977.01.T01 MTR_7g061330 40.952 105 61 1 21 125 75 178 1.13e-20 91.7
MsG0580028977.01.T01 MTR_7g061330 32.692 104 68 2 23 125 25 127 1.32e-11 64.7
MsG0580028977.01.T01 MTR_7g061550 45.745 94 49 1 26 117 10 103 2.76e-20 89.4
MsG0580028977.01.T01 MTR_6g027360 35.000 140 81 3 21 160 76 205 2.78e-20 89.0
MsG0580028977.01.T01 MTR_7g035350 42.056 107 60 2 23 128 225 330 2.88e-20 90.1
MsG0580028977.01.T01 MTR_4g088015 38.318 107 65 1 23 129 221 326 2.94e-20 90.1
MsG0580028977.01.T01 MTR_7g451170 37.838 111 68 1 23 133 191 300 3.59e-20 89.7
MsG0580028977.01.T01 MTR_6g015455 41.346 104 52 2 23 122 5 103 6.78e-20 89.7
MsG0580028977.01.T01 MTR_6g027370 39.316 117 70 1 3 119 79 194 1.16e-19 87.8
MsG0580028977.01.T01 MTR_1g085880 42.857 105 58 2 21 123 11 115 7.49e-19 82.4
MsG0580028977.01.T01 MTR_1g085770 42.857 105 58 2 21 123 11 115 1.99e-18 83.6
MsG0580028977.01.T01 MTR_5g082910 38.835 103 54 2 23 121 19 116 3.00e-18 82.8
MsG0580028977.01.T01 MTR_7g037130 38.000 100 61 1 23 122 145 243 1.91e-17 81.6
MsG0580028977.01.T01 MTR_7g450950 33.077 130 86 1 16 145 150 278 2.86e-17 80.9
MsG0580028977.01.T01 MTR_5g010650 36.190 105 66 1 14 118 101 204 6.08e-17 80.5
MsG0580028977.01.T01 MTR_2g088730 66.667 39 13 0 79 117 34 72 1.74e-14 67.8
MsG0580028977.01.T01 MTR_5g038910 34.483 116 75 1 8 123 11 125 3.41e-14 72.4
MsG0580028977.01.T01 MTR_5g038910 34.483 116 75 1 8 123 11 125 5.40e-14 71.6
MsG0580028977.01.T01 MTR_6g055910 53.846 52 24 0 79 130 2 53 1.43e-13 68.6
MsG0580028977.01.T01 MTR_8g468380 29.299 157 106 3 8 160 6 161 5.00e-13 68.9
MsG0580028977.01.T01 MTR_4g063100 54.902 51 20 1 83 133 5 52 2.77e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028977.01.T01 AT1G66370 51.570 223 69 5 19 221 6 209 1.90e-63 199
MsG0580028977.01.T01 AT1G66390 53.153 222 77 5 13 221 1 208 6.41e-55 178
MsG0580028977.01.T01 AT1G56650 47.934 242 86 7 13 237 1 219 2.64e-54 176
MsG0580028977.01.T01 AT1G66380 80.180 111 21 1 13 123 1 110 1.19e-52 168
MsG0580028977.01.T01 AT3G13540 43.781 201 96 5 3 199 1 188 1.19e-48 162
MsG0580028977.01.T01 AT5G14750 55.752 113 50 0 22 134 17 129 5.47e-43 145
MsG0580028977.01.T01 AT1G22640 59.259 108 44 0 21 128 12 119 7.60e-43 147
MsG0580028977.01.T01 AT5G40330 59.615 104 42 0 22 125 13 116 8.01e-43 146
MsG0580028977.01.T01 AT4G38620 59.434 106 43 0 23 128 14 119 3.34e-42 146
MsG0580028977.01.T01 AT5G16770 60.748 107 42 0 20 126 11 117 7.72e-42 146
MsG0580028977.01.T01 AT5G16770 60.748 107 42 0 20 126 11 117 7.72e-42 146
MsG0580028977.01.T01 AT3G27920 58.491 106 44 0 22 127 15 120 8.70e-42 143
MsG0580028977.01.T01 AT5G16770 60.748 107 42 0 20 126 11 117 1.23e-41 146
MsG0580028977.01.T01 AT5G16770 60.748 107 42 0 20 126 11 117 1.23e-41 146
MsG0580028977.01.T01 AT2G16720 57.407 108 46 0 21 128 12 119 3.17e-41 143
MsG0580028977.01.T01 AT3G23250 51.587 126 55 1 20 139 11 136 4.65e-41 143
MsG0580028977.01.T01 AT4G09460 50.388 129 63 1 23 150 14 142 7.61e-41 141
MsG0580028977.01.T01 AT5G35550 56.303 119 47 1 21 139 14 127 8.61e-41 142
MsG0580028977.01.T01 AT5G52600 56.522 115 50 0 21 135 12 126 1.05e-40 140
MsG0580028977.01.T01 AT3G02940 57.944 107 45 0 20 126 11 117 2.23e-40 142
MsG0580028977.01.T01 AT4G21440 58.879 107 44 0 20 126 11 117 2.52e-40 143
MsG0580028977.01.T01 AT3G02940 57.944 107 45 0 20 126 11 117 2.84e-40 142
MsG0580028977.01.T01 AT3G02940 57.944 107 45 0 20 126 11 117 2.84e-40 142
MsG0580028977.01.T01 AT1G74080 54.464 112 51 0 17 128 8 119 3.88e-40 142
MsG0580028977.01.T01 AT3G61250 53.846 117 54 0 20 136 11 127 4.15e-40 141
MsG0580028977.01.T01 AT4G28110 32.624 282 153 8 20 275 11 281 6.24e-40 140
MsG0580028977.01.T01 AT5G07690 56.881 109 47 0 20 128 11 119 1.71e-39 140
MsG0580028977.01.T01 AT5G10280 55.856 111 49 0 16 126 7 117 2.24e-39 140
MsG0580028977.01.T01 AT5G61420 56.881 109 47 0 20 128 11 119 2.73e-39 140
MsG0580028977.01.T01 AT1G35515 38.674 181 100 2 21 200 12 182 2.89e-39 136
MsG0580028977.01.T01 AT1G18570 55.963 109 48 0 20 128 12 120 3.02e-39 140
MsG0580028977.01.T01 AT5G60890 41.573 178 98 2 17 188 8 185 3.51e-39 139
MsG0580028977.01.T01 AT4G05100 56.364 110 48 0 17 126 9 118 3.89e-39 139
MsG0580028977.01.T01 AT5G07700 57.944 107 45 0 20 126 11 117 4.19e-39 139
MsG0580028977.01.T01 AT5G07700 57.944 107 45 0 20 126 11 117 4.19e-39 139
MsG0580028977.01.T01 AT5G15310 52.756 127 56 1 20 142 11 137 4.20e-39 139
MsG0580028977.01.T01 AT4G17785 57.407 108 46 0 19 126 11 118 5.01e-39 139
MsG0580028977.01.T01 AT4G17785 57.407 108 46 0 19 126 11 118 5.26e-39 140
MsG0580028977.01.T01 AT5G15310 52.756 127 56 1 20 142 11 137 5.40e-39 139
MsG0580028977.01.T01 AT5G15310 52.756 127 56 1 20 142 11 137 5.94e-39 137
MsG0580028977.01.T01 AT4G34990 56.604 106 46 0 23 128 14 119 6.18e-39 137
MsG0580028977.01.T01 AT3G30210 50.365 137 67 1 20 156 26 161 8.37e-39 137
MsG0580028977.01.T01 AT1G06180 57.547 106 45 0 20 125 11 116 1.64e-38 135
MsG0580028977.01.T01 AT5G65230 54.955 111 50 0 16 126 7 117 1.64e-38 137
MsG0580028977.01.T01 AT3G47600 58.491 106 44 0 20 125 11 116 2.76e-38 137
MsG0580028977.01.T01 AT3G01140 45.775 142 77 0 20 161 11 152 2.85e-38 137
MsG0580028977.01.T01 AT5G54230 56.604 106 46 0 21 126 12 117 3.38e-38 137
MsG0580028977.01.T01 AT3G01140 45.775 142 77 0 20 161 54 195 5.58e-38 138
MsG0580028977.01.T01 AT4G01680 57.407 108 46 0 21 128 12 119 8.00e-38 134
MsG0580028977.01.T01 AT5G49330 54.630 108 49 0 20 127 11 118 1.04e-37 136
MsG0580028977.01.T01 AT2G31180 55.660 106 47 0 20 125 11 116 1.32e-37 133
MsG0580028977.01.T01 AT4G01680 57.407 108 46 0 21 128 12 119 3.01e-37 134
MsG0580028977.01.T01 AT1G74650 55.963 109 48 0 21 129 12 120 3.35e-37 134
MsG0580028977.01.T01 AT5G62470 53.448 116 54 0 20 135 11 126 3.38e-37 135
MsG0580028977.01.T01 AT3G28910 57.547 106 45 0 20 125 11 116 3.87e-37 134
MsG0580028977.01.T01 AT1G34670 56.075 107 47 0 20 126 11 117 6.91e-37 134
MsG0580028977.01.T01 AT1G57560 54.630 108 49 0 21 128 12 119 1.72e-36 131
MsG0580028977.01.T01 AT1G57560 54.630 108 49 0 21 128 12 119 2.04e-36 132
MsG0580028977.01.T01 AT5G57620 55.357 112 49 1 21 131 12 123 2.47e-36 132
MsG0580028977.01.T01 AT1G74430 53.211 109 51 0 20 128 11 119 3.46e-36 130
MsG0580028977.01.T01 AT1G08810 55.660 106 47 0 20 125 11 116 5.13e-36 130
MsG0580028977.01.T01 AT1G16490 51.402 107 52 0 21 127 14 120 5.68e-36 130
MsG0580028977.01.T01 AT5G56110 56.190 105 46 0 21 125 12 116 5.79e-36 131
MsG0580028977.01.T01 AT1G66380 75.281 89 21 1 13 101 1 88 6.93e-36 124
MsG0580028977.01.T01 AT5G26660 56.190 105 46 0 21 125 12 116 9.35e-36 131
MsG0580028977.01.T01 AT3G62610 53.774 106 49 0 20 125 11 116 1.03e-35 130
MsG0580028977.01.T01 AT2G47460 51.887 106 51 0 20 125 11 116 1.08e-35 131
MsG0580028977.01.T01 AT5G62470 53.448 116 53 1 20 135 11 125 1.32e-35 130
MsG0580028977.01.T01 AT1G09540 53.704 108 50 0 21 128 12 119 2.37e-35 130
MsG0580028977.01.T01 AT5G65790 48.780 123 62 1 21 142 12 134 2.98e-35 130
MsG0580028977.01.T01 AT3G49690 51.327 113 54 1 21 132 12 124 4.08e-35 128
MsG0580028977.01.T01 AT4G37780 50.450 111 54 1 20 129 11 121 5.89e-35 128
MsG0580028977.01.T01 AT3G13890 52.336 107 51 0 21 127 12 118 8.37e-35 129
MsG0580028977.01.T01 AT5G12870 50.459 109 54 0 17 125 14 122 1.77e-34 126
MsG0580028977.01.T01 AT5G23000 41.398 186 101 6 21 200 12 195 2.66e-34 127
MsG0580028977.01.T01 AT3G48920 49.091 110 56 0 22 131 19 128 2.67e-34 125
MsG0580028977.01.T01 AT1G79180 50.000 106 53 0 21 126 14 119 3.53e-34 125
MsG0580028977.01.T01 AT3G28470 54.545 99 45 0 21 119 12 110 4.07e-34 126
MsG0580028977.01.T01 AT4G01680 51.667 120 46 1 21 128 12 131 8.57e-34 125
MsG0580028977.01.T01 AT2G32460 50.476 105 52 0 19 123 16 120 1.78e-33 127
MsG0580028977.01.T01 AT5G62320 44.295 149 62 3 20 152 12 155 1.83e-33 122
MsG0580028977.01.T01 AT2G32460 50.476 105 52 0 19 123 4 108 2.03e-33 127
MsG0580028977.01.T01 AT4G12350 53.774 106 49 0 21 126 12 117 2.03e-33 123
MsG0580028977.01.T01 AT4G25560 54.902 102 46 0 22 123 11 112 2.69e-33 123
MsG0580028977.01.T01 AT3G24310 54.630 108 49 0 20 127 17 124 2.93e-33 122
MsG0580028977.01.T01 AT4G22680 42.384 151 82 2 20 166 11 160 3.56e-33 122
MsG0580028977.01.T01 AT3G01530 50.000 112 56 0 14 125 18 129 3.83e-33 120
MsG0580028977.01.T01 AT1G18710 51.818 110 52 1 20 129 11 119 4.64e-33 122
MsG0580028977.01.T01 AT1G56160 50.943 106 52 0 21 126 14 119 5.61e-33 122
MsG0580028977.01.T01 AT3G12820 49.074 108 55 0 21 128 14 121 6.31e-33 121
MsG0580028977.01.T01 AT3G12720 48.148 108 56 0 21 128 22 129 1.03e-32 122
MsG0580028977.01.T01 AT3G53200 52.252 111 53 0 13 123 1 111 1.08e-32 120
MsG0580028977.01.T01 AT5G55020 51.456 103 50 0 21 123 26 128 1.36e-32 125
MsG0580028977.01.T01 AT4G26930 50.485 103 51 0 21 123 19 121 1.71e-32 123
MsG0580028977.01.T01 AT3G08500 53.333 105 49 0 21 125 30 134 1.93e-32 122
MsG0580028977.01.T01 AT3G46130 47.009 117 62 0 13 129 1 117 2.15e-32 120
MsG0580028977.01.T01 AT1G66230 44.928 138 66 1 20 147 11 148 2.55e-32 120
MsG0580028977.01.T01 AT4G13480 54.902 102 46 0 22 123 7 108 3.63e-32 119
MsG0580028977.01.T01 AT1G25340 55.882 102 45 0 22 123 19 120 4.06e-32 120
MsG0580028977.01.T01 AT5G59780 50.000 108 54 0 22 129 9 116 4.18e-32 119
MsG0580028977.01.T01 AT5G16600 43.056 144 70 1 20 151 11 154 4.40e-32 120
MsG0580028977.01.T01 AT5G52260 56.364 110 47 1 14 123 6 114 5.42e-32 119
MsG0580028977.01.T01 AT5G40350 41.667 144 80 1 21 160 17 160 6.92e-32 117
MsG0580028977.01.T01 AT3G13890 48.276 116 51 1 21 127 12 127 7.22e-32 121
MsG0580028977.01.T01 AT2G36890 51.852 108 51 1 21 127 12 119 7.80e-32 119
MsG0580028977.01.T01 AT1G63910 50.476 105 52 0 21 125 12 116 8.33e-32 121
MsG0580028977.01.T01 AT2G36890 51.852 108 51 1 21 127 53 160 1.02e-31 120
MsG0580028977.01.T01 AT1G48000 54.808 104 47 0 21 124 32 135 1.49e-31 117
MsG0580028977.01.T01 AT5G14340 51.887 106 51 0 20 125 23 128 2.21e-31 117
MsG0580028977.01.T01 AT1G68320 56.311 103 45 0 21 123 19 121 2.39e-31 118
MsG0580028977.01.T01 AT2G47190 51.456 103 50 0 21 123 20 122 2.43e-31 117
MsG0580028977.01.T01 AT2G26960 46.364 110 59 0 14 123 13 122 3.19e-31 120
MsG0580028977.01.T01 AT3G27810 34.434 212 111 4 21 215 20 220 4.48e-31 115
MsG0580028977.01.T01 AT5G14750 58.621 87 33 1 48 134 12 95 1.10e-30 113
MsG0580028977.01.T01 AT1G66380 83.099 71 12 0 53 123 7 77 1.21e-30 110
MsG0580028977.01.T01 AT5G06100 47.115 104 55 0 20 123 31 134 1.52e-30 119
MsG0580028977.01.T01 AT5G06100 47.115 104 55 0 20 123 31 134 2.87e-30 119
MsG0580028977.01.T01 AT5G06100 47.115 104 55 0 20 123 31 134 2.87e-30 119
MsG0580028977.01.T01 AT5G06100 47.115 104 55 0 20 123 31 134 2.87e-30 119
MsG0580028977.01.T01 AT5G06100 47.115 104 55 0 20 123 31 134 2.87e-30 119
MsG0580028977.01.T01 AT3G11440 44.037 109 61 0 15 123 35 143 7.70e-30 117
MsG0580028977.01.T01 AT3G11440 44.037 109 61 0 15 123 35 143 1.44e-29 117
MsG0580028977.01.T01 AT3G11440 44.037 109 61 0 15 123 35 143 1.44e-29 117
MsG0580028977.01.T01 AT3G11440 44.037 109 61 0 15 123 35 143 1.44e-29 117
MsG0580028977.01.T01 AT1G25340 53.922 102 42 1 22 123 19 115 7.78e-29 111
MsG0580028977.01.T01 AT1G25340 53.922 102 42 1 22 123 19 115 1.11e-28 111
MsG0580028977.01.T01 AT1G79180 37.410 139 54 1 21 126 14 152 7.18e-28 109
MsG0580028977.01.T01 AT5G35550 58.140 86 31 1 54 139 50 130 4.06e-27 106
MsG0580028977.01.T01 AT1G69560 35.862 145 89 2 16 160 100 240 4.91e-27 107
MsG0580028977.01.T01 AT1G69560 35.862 145 89 2 16 160 116 256 5.35e-27 107
MsG0580028977.01.T01 AT3G53200 60.526 76 30 0 48 123 3 78 4.61e-26 102
MsG0580028977.01.T01 AT3G06490 52.427 103 49 0 21 123 19 121 1.43e-25 103
MsG0580028977.01.T01 AT2G26950 39.286 112 68 0 8 119 3 114 2.00e-25 103
MsG0580028977.01.T01 AT3G47600 63.889 72 26 0 54 125 39 110 3.52e-25 102
MsG0580028977.01.T01 AT5G26660 54.023 87 39 1 52 138 12 97 4.18e-25 102
MsG0580028977.01.T01 AT1G26780 37.405 131 76 2 21 151 96 220 4.45e-25 101
MsG0580028977.01.T01 AT5G49620 50.962 104 51 0 21 124 26 129 4.68e-25 101
MsG0580028977.01.T01 AT4G18770 43.103 116 65 1 14 129 208 322 5.14e-25 103
MsG0580028977.01.T01 AT1G26780 37.405 131 76 2 21 151 96 220 7.05e-25 102
MsG0580028977.01.T01 AT5G11510 42.991 107 60 1 21 127 79 184 8.71e-25 104
MsG0580028977.01.T01 AT5G11510 42.991 107 60 1 21 127 79 184 8.71e-25 104
MsG0580028977.01.T01 AT5G11510 42.991 107 60 1 21 127 79 184 8.71e-25 104
MsG0580028977.01.T01 AT5G11510 42.991 107 60 1 21 127 79 184 1.32e-24 103
MsG0580028977.01.T01 AT1G17950 39.316 117 65 2 23 139 5 115 1.43e-24 99.4
MsG0580028977.01.T01 AT5G11510 42.991 107 60 1 21 127 79 184 1.58e-24 103
MsG0580028977.01.T01 AT3G12820 55.556 72 32 0 57 128 2 73 6.55e-24 95.9
MsG0580028977.01.T01 AT5G59780 55.128 78 35 0 52 129 18 95 1.05e-23 96.3
MsG0580028977.01.T01 AT3G09230 41.880 117 64 2 19 132 48 163 1.37e-23 99.4
MsG0580028977.01.T01 AT3G46130 55.128 78 35 0 52 129 18 95 2.09e-23 95.9
MsG0580028977.01.T01 AT3G46130 54.545 77 35 0 53 129 9 85 4.72e-23 94.7
MsG0580028977.01.T01 AT3G55730 43.810 105 58 1 19 123 52 155 6.12e-23 97.4
MsG0580028977.01.T01 AT3G09370 42.718 103 58 1 21 123 133 234 6.60e-23 98.2
MsG0580028977.01.T01 AT3G09370 30.769 104 70 2 23 125 83 185 8.17e-11 62.4
MsG0580028977.01.T01 AT3G09370 42.718 103 58 1 21 123 128 229 6.61e-23 98.2
MsG0580028977.01.T01 AT3G09370 30.769 104 70 2 23 125 78 180 8.06e-11 62.4
MsG0580028977.01.T01 AT3G09370 42.718 103 58 1 21 123 141 242 8.79e-23 97.8
MsG0580028977.01.T01 AT3G09370 30.769 104 70 2 23 125 91 193 8.55e-11 62.4
MsG0580028977.01.T01 AT5G17800 28.877 187 121 3 23 201 93 275 9.25e-23 95.9
MsG0580028977.01.T01 AT5G14750 58.824 68 28 0 67 134 1 68 9.41e-23 91.7
MsG0580028977.01.T01 AT5G14750 58.824 68 28 0 67 134 1 68 9.41e-23 91.7
MsG0580028977.01.T01 AT2G39880 44.554 101 55 1 23 123 50 149 1.06e-22 96.3
MsG0580028977.01.T01 AT5G58850 36.508 126 79 1 10 135 92 216 1.08e-22 97.1
MsG0580028977.01.T01 AT4G33450 38.462 130 74 3 22 150 18 142 1.28e-22 94.0
MsG0580028977.01.T01 AT3G60460 40.909 110 64 1 15 123 5 114 1.58e-22 94.7
MsG0580028977.01.T01 AT4G37260 42.857 105 51 2 23 123 13 112 1.73e-22 95.1
MsG0580028977.01.T01 AT1G73410 46.535 101 45 2 23 119 6 101 2.45e-22 93.2
MsG0580028977.01.T01 AT3G29020 34.752 141 87 3 15 152 57 195 2.47e-22 92.8
MsG0580028977.01.T01 AT1G71030 58.824 68 28 0 59 126 4 71 3.06e-22 91.3
MsG0580028977.01.T01 AT1G71030 58.824 68 28 0 59 126 18 85 3.86e-22 91.7
MsG0580028977.01.T01 AT1G73410 46.535 101 45 2 23 119 6 101 3.96e-22 91.7
MsG0580028977.01.T01 AT2G37630 42.373 118 66 1 26 141 7 124 4.72e-22 94.7
MsG0580028977.01.T01 AT3G27785 39.496 119 71 1 16 134 182 299 5.89e-22 95.1
MsG0580028977.01.T01 AT2G23290 42.857 105 51 2 23 123 13 112 6.22e-22 93.6
MsG0580028977.01.T01 AT3G29020 34.752 141 87 3 15 152 59 197 6.50e-22 93.2
MsG0580028977.01.T01 AT5G02320 40.000 105 62 1 21 125 125 228 1.11e-21 94.7
MsG0580028977.01.T01 AT5G02320 40.000 105 62 1 21 125 125 228 1.11e-21 94.7
MsG0580028977.01.T01 AT5G02320 40.000 105 62 1 21 125 65 168 1.57e-21 94.0
MsG0580028977.01.T01 AT5G49620 44.915 118 51 1 21 124 26 143 1.60e-21 92.4
MsG0580028977.01.T01 AT4G32730 32.867 143 90 2 21 163 85 221 3.99e-21 93.6
MsG0580028977.01.T01 AT4G32730 32.867 143 90 2 21 163 85 221 3.99e-21 93.6
MsG0580028977.01.T01 AT4G32730 32.867 143 90 2 21 163 85 221 3.99e-21 93.6
MsG0580028977.01.T01 AT4G32730 32.867 143 90 2 21 163 85 221 3.99e-21 93.6
MsG0580028977.01.T01 AT4G32730 32.867 143 90 2 21 163 85 221 4.00e-21 93.2
MsG0580028977.01.T01 AT5G40350 40.541 111 62 1 54 160 5 115 4.15e-21 88.2
MsG0580028977.01.T01 AT5G67300 42.574 101 57 1 23 123 6 105 5.76e-21 90.5
MsG0580028977.01.T01 AT5G11050 35.246 122 78 1 14 135 96 216 6.86e-21 92.0
MsG0580028977.01.T01 AT1G22640 56.452 62 27 0 67 128 1 62 8.82e-21 87.8
MsG0580028977.01.T01 AT3G27810 32.961 179 92 4 54 215 4 171 9.09e-21 87.4
MsG0580028977.01.T01 AT3G50060 34.559 136 80 2 23 150 6 140 1.21e-20 89.7
MsG0580028977.01.T01 AT3G23250 50.633 79 33 1 67 139 1 79 1.80e-20 87.8
MsG0580028977.01.T01 AT5G39700 37.705 122 72 3 9 130 43 160 8.64e-20 85.1
MsG0580028977.01.T01 AT5G40360 39.806 103 61 1 21 123 156 257 1.59e-19 87.4
MsG0580028977.01.T01 AT1G18960 39.623 106 55 3 23 125 10 109 4.06e-18 82.8
MsG0580028977.01.T01 AT2G25230 37.383 107 66 1 17 123 20 125 4.49e-17 78.6
MsG0580028977.01.T01 AT4G00540 38.393 112 57 3 21 125 101 207 6.12e-17 80.5
MsG0580028977.01.T01 AT4G00540 30.952 126 75 4 18 131 41 166 4.04e-11 63.2
MsG0580028977.01.T01 AT4G00540 38.393 112 57 3 21 125 99 205 8.88e-17 80.1
MsG0580028977.01.T01 AT4G00540 28.873 142 89 4 2 131 23 164 1.19e-11 65.1
MsG0580028977.01.T01 AT5G40430 35.514 107 67 2 17 123 48 152 6.33e-15 73.2
MsG0580028977.01.T01 AT2G02820 32.743 113 75 1 11 123 18 129 2.77e-13 69.7
MsG0580028977.01.T01 AT2G02820 32.743 113 75 1 11 123 18 129 3.16e-13 69.7
MsG0580028977.01.T01 AT2G02820 32.743 113 75 1 11 123 18 129 3.35e-13 68.9
MsG0580028977.01.T01 AT3G18100 35.922 103 65 1 15 117 538 639 1.14e-12 68.2
MsG0580028977.01.T01 AT3G18100 35.922 103 65 1 15 117 377 478 1.23e-12 68.2
MsG0580028977.01.T01 AT3G18100 35.922 103 65 1 15 117 325 426 1.48e-12 67.8
MsG0580028977.01.T01 AT3G18100 35.922 103 65 1 15 117 490 591 1.51e-12 67.8
MsG0580028977.01.T01 AT1G14350 33.673 98 64 1 26 123 28 124 4.65e-12 66.2
MsG0580028977.01.T01 AT1G14350 33.673 98 64 1 26 123 28 124 4.65e-12 66.2
MsG0580028977.01.T01 AT1G74650 61.364 44 17 0 86 129 1 44 7.83e-12 64.3
MsG0580028977.01.T01 AT4G25560 59.091 44 18 0 80 123 3 46 1.48e-11 63.2
MsG0580028977.01.T01 AT5G59780 55.319 47 21 0 83 129 5 51 3.09e-11 61.2
MsG0580028977.01.T01 AT3G46130 55.319 47 21 0 83 129 5 51 5.43e-11 60.8
MsG0580028977.01.T01 AT3G28910 62.500 40 15 0 86 125 1 40 6.88e-11 61.6

Find 51 sgRNAs with CRISPR-Local

Find 90 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCATTCACCATGGTTAAA+TGG 0.170730 5:+89847114 MsG0580028977.01.T01:CDS
AAAGTTATCAACATTTAATT+TGG 0.172381 5:-89847364 None:intergenic
TTTAGATGATATCTTAAATT+AGG 0.200033 5:+89847455 MsG0580028977.01.T01:CDS
GTACTGTCGGTGATTGCTTC+TGG 0.240964 5:+89847403 MsG0580028977.01.T01:CDS
CACACATTTGCGCAAGAATA+TGG 0.270216 5:+89846999 MsG0580028977.01.T01:CDS
CAATCTCCATCAACATTAAT+TGG 0.275334 5:-89847225 None:intergenic
CTAATGATGTGAAGAATTAT+TGG 0.279813 5:+89846974 MsG0580028977.01.T01:CDS
ATTCTACCAATTAATGTTGA+TGG 0.309304 5:+89847219 MsG0580028977.01.T01:CDS
TGAGTTTGCATGCTTTCTTT+AGG 0.316758 5:-89847057 None:intergenic
TACTGTCGGTGATTGCTTCT+GGG 0.333499 5:+89847404 MsG0580028977.01.T01:CDS
TTGATTGCTGCAAGACTTCC+GGG 0.345324 5:+89846943 MsG0580028977.01.T01:CDS
CATTATATACCTGCTCTTTG+TGG 0.372515 5:-89845945 None:intergenic
TGTACTTGGCAGGATTAAAT+AGG 0.374086 5:+89846050 MsG0580028977.01.T01:intron
CTCATTCACCATGGTTAAAT+GGG 0.379865 5:+89847115 MsG0580028977.01.T01:CDS
ATTGATTGCTGCAAGACTTC+CGG 0.392491 5:+89846942 MsG0580028977.01.T01:CDS
TTTGTTGAAACCGTCACTAT+TGG 0.404174 5:-89847159 None:intergenic
TTTAATTTGGAATATTCCTC+TGG 0.409911 5:-89847351 None:intergenic
GAAGCAATCACCGACAGTAC+TGG 0.437278 5:-89847400 None:intergenic
AAGGCTTGTATACAGAAGTA+TGG 0.446225 5:+89845900 MsG0580028977.01.T01:CDS
TACACAAGCTCCTAGGAAAC+AGG 0.453563 5:+89846170 MsG0580028977.01.T01:CDS
TGGACAAAAGCAAGTGCATA+TGG 0.458738 5:+89845815 MsG0580028977.01.T01:CDS
AACGTGAGCAATGACAAAAT+TGG 0.485163 5:+89847309 MsG0580028977.01.T01:CDS
TTAAGGTTACACAAGCTCCT+AGG 0.491730 5:+89846163 MsG0580028977.01.T01:CDS
AAGACTAGAGGTTTGAGAAA+AGG 0.493357 5:+89845846 MsG0580028977.01.T01:CDS
GTTGATAACTTTCTTACTGA+AGG 0.494299 5:+89847375 MsG0580028977.01.T01:CDS
AAGAGAGTCAAATTCACAAA+TGG 0.496518 5:-89847433 None:intergenic
TGCATACATACCTGTTTCCT+AGG 0.499222 5:-89846180 None:intergenic
CTCATGCCTTTGTTTGTCTG+TGG 0.499993 5:+89845795 None:intergenic
AAACTTTCTCTATTAATGGT+GGG 0.502919 5:-89846115 None:intergenic
AAAACTTTCTCTATTAATGG+TGG 0.516920 5:-89846116 None:intergenic
AAAAGGTGCATGGACATATG+AGG 0.529512 5:+89845863 MsG0580028977.01.T01:CDS
AGAAGTATGGTGAAGGAAAG+TGG 0.544296 5:+89845913 MsG0580028977.01.T01:CDS
AAGCAATCACCGACAGTACT+GGG 0.544779 5:-89847399 None:intergenic
CATTTAGTTCCACAAAGAGC+AGG 0.555403 5:+89845936 MsG0580028977.01.T01:CDS
GCCGGAAAAGTTGTAGATTG+AGG 0.555853 5:+89846074 MsG0580028977.01.T01:CDS
CAACCGTGTCTTCCATGTGG+TGG 0.559880 5:+89847274 MsG0580028977.01.T01:CDS
AACCGTGTCTTCCATGTGGT+GGG 0.571636 5:+89847275 MsG0580028977.01.T01:CDS
TGGCAGGATTAAATAGGTGC+CGG 0.572085 5:+89846056 MsG0580028977.01.T01:intron
ACATCATTAGCTGTTCTACC+CGG 0.596176 5:-89846961 None:intergenic
CTCCCACCACATGGAAGACA+CGG 0.597007 5:-89847277 None:intergenic
TTATATTTCCCATTTAACCA+TGG 0.601242 5:-89847123 None:intergenic
TGAGGAAGACAAGCTACTCA+AGG 0.611389 5:+89845881 MsG0580028977.01.T01:CDS
GAGGTTTGAGAAAAGGTGCA+TGG 0.612742 5:+89845853 MsG0580028977.01.T01:CDS
TGTATACAGAAGTATGGTGA+AGG 0.613440 5:+89845906 MsG0580028977.01.T01:CDS
CAACAAACTCTCCCACCACA+TGG 0.617722 5:-89847286 None:intergenic
ATGCTCTTTACTATTACCAG+AGG 0.637280 5:+89847335 MsG0580028977.01.T01:CDS
GGAAAAGTTGTAGATTGAGG+TGG 0.642383 5:+89846077 MsG0580028977.01.T01:CDS
ACTGAAGGACCCAGTACTGT+CGG 0.653910 5:+89847390 MsG0580028977.01.T01:CDS
ATGGAGAAGAGTAAGACTAG+AGG 0.674464 5:+89845834 MsG0580028977.01.T01:CDS
GTGACGGTTTCAACAAACGA+TGG 0.707992 5:+89847165 MsG0580028977.01.T01:CDS
ATTCAACCGTGTCTTCCATG+TGG 0.728421 5:+89847271 MsG0580028977.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAAATAAACTTATATTTA+AGG - Chr5:89846308-89846327 None:intergenic 10.0%
!! AAAGTTATCAACATTTAATT+TGG - Chr5:89847367-89847386 None:intergenic 15.0%
!! TAAATGAGTATAAAAAGTTT+GGG + Chr5:89846764-89846783 MsG0580028977.01.T01:intron 15.0%
!! TATTAATCAAAGGTTTATTT+GGG - Chr5:89846551-89846570 None:intergenic 15.0%
!! TATTCTTAAAATAGTTTAAG+TGG - Chr5:89846867-89846886 None:intergenic 15.0%
!! TTAAATGAGTATAAAAAGTT+TGG + Chr5:89846763-89846782 MsG0580028977.01.T01:intron 15.0%
!!! ATTTAAAATTAGTCTGTTTT+AGG - Chr5:89846498-89846517 None:intergenic 15.0%
!!! TTTAAAATTAGTCTGTTTTA+GGG - Chr5:89846497-89846516 None:intergenic 15.0%
!! AGAAAAACTTTCTCTATTAA+TGG - Chr5:89846122-89846141 None:intergenic 20.0%
!! CTAAGAGATATTCATAAAAA+AGG + Chr5:89846593-89846612 MsG0580028977.01.T01:intron 20.0%
!! GTATTAATCAAAGGTTTATT+TGG - Chr5:89846552-89846571 None:intergenic 20.0%
!! TAACTAGTAGTATTAATCAA+AGG - Chr5:89846561-89846580 None:intergenic 20.0%
!! TATCTAATTAAATGACAACT+TGG - Chr5:89846217-89846236 None:intergenic 20.0%
!!! ATGAAGTTGATATGATTTTA+AGG + Chr5:89846146-89846165 MsG0580028977.01.T01:CDS 20.0%
! AAAACTTTCTCTATTAATGG+TGG - Chr5:89846119-89846138 None:intergenic 25.0%
! AAACTTTCTCTATTAATGGT+GGG - Chr5:89846118-89846137 None:intergenic 25.0%
! AAAGTGGCATTATTATATAC+TGG - Chr5:89846418-89846437 None:intergenic 25.0%
! ATTCTACCAATTAATGTTGA+TGG + Chr5:89847219-89847238 MsG0580028977.01.T01:CDS 25.0%
! CTAATGATGTGAAGAATTAT+TGG + Chr5:89846974-89846993 MsG0580028977.01.T01:CDS 25.0%
! TTATATTTCCCATTTAACCA+TGG - Chr5:89847126-89847145 None:intergenic 25.0%
!! AAATACTTGTTACATGTACT+TGG + Chr5:89846036-89846055 MsG0580028977.01.T01:intron 25.0%
!! AATAAAGAAGAAAAGTGTGA+TGG + Chr5:89846681-89846700 MsG0580028977.01.T01:intron 25.0%
!! AATTCAAATTTTCTCGAAGA+TGG + Chr5:89846380-89846399 MsG0580028977.01.T01:intron 25.0%
!! ATAAAGAAGAAAAGTGTGAT+GGG + Chr5:89846682-89846701 MsG0580028977.01.T01:intron 25.0%
!! ATTCAAATTTTCTCGAAGAT+GGG + Chr5:89846381-89846400 MsG0580028977.01.T01:intron 25.0%
!! TAATAGAGAAAGTTTTTCTG+AGG + Chr5:89846123-89846142 MsG0580028977.01.T01:CDS 25.0%
!!! TTTAATTTGGAATATTCCTC+TGG - Chr5:89847354-89847373 None:intergenic 25.0%
AAGAGAGTCAAATTCACAAA+TGG - Chr5:89847436-89847455 None:intergenic 30.0%
ACAAGTGTCTTAAAATATGG+GGG + Chr5:89846616-89846635 MsG0580028977.01.T01:intron 30.0%
AGGACAAGTGTCTTAAAATA+TGG + Chr5:89846613-89846632 MsG0580028977.01.T01:intron 30.0%
CAATCTCCATCAACATTAAT+TGG - Chr5:89847228-89847247 None:intergenic 30.0%
GACAAGTGTCTTAAAATATG+GGG + Chr5:89846615-89846634 MsG0580028977.01.T01:intron 30.0%
GGACAAGTGTCTTAAAATAT+GGG + Chr5:89846614-89846633 MsG0580028977.01.T01:intron 30.0%
! AGTGAAATGCATTGATAAAG+TGG - Chr5:89846434-89846453 None:intergenic 30.0%
! ATTTTTCACACCAATAGTGA+CGG + Chr5:89847149-89847168 MsG0580028977.01.T01:CDS 30.0%
!! ACGGTTGAATTTTCAAGATA+TGG - Chr5:89847261-89847280 None:intergenic 30.0%
!! ATTTTCAAGATATGGTTGTG+CGG - Chr5:89847253-89847272 None:intergenic 30.0%
!! GTTGATAACTTTCTTACTGA+AGG + Chr5:89847375-89847394 MsG0580028977.01.T01:CDS 30.0%
!!! AGCTTGTTTTGTAATCTGAA+GGG + Chr5:89846353-89846372 MsG0580028977.01.T01:intron 30.0%
AACGTGAGCAATGACAAAAT+TGG + Chr5:89847309-89847328 MsG0580028977.01.T01:CDS 35.0%
AAGACTAGAGGTTTGAGAAA+AGG + Chr5:89845846-89845865 MsG0580028977.01.T01:CDS 35.0%
AAGGCTTGTATACAGAAGTA+TGG + Chr5:89845900-89845919 MsG0580028977.01.T01:CDS 35.0%
ATGCTCTTTACTATTACCAG+AGG + Chr5:89847335-89847354 MsG0580028977.01.T01:CDS 35.0%
ATTAAATGACAACTTGGCCT+TGG - Chr5:89846211-89846230 None:intergenic 35.0%
CATTATATACCTGCTCTTTG+TGG - Chr5:89845948-89845967 None:intergenic 35.0%
CTCATTCACCATGGTTAAAT+GGG + Chr5:89847115-89847134 MsG0580028977.01.T01:CDS 35.0%
GAATGAGATGAAAAAGTTCG+AGG - Chr5:89847102-89847121 None:intergenic 35.0%
TCTCATTCACCATGGTTAAA+TGG + Chr5:89847114-89847133 MsG0580028977.01.T01:CDS 35.0%
TGAGTTTGCATGCTTTCTTT+AGG - Chr5:89847060-89847079 None:intergenic 35.0%
TGGGGGAAGTCAATATTAAA+TGG + Chr5:89846633-89846652 MsG0580028977.01.T01:intron 35.0%
TGTACTTGGCAGGATTAAAT+AGG + Chr5:89846050-89846069 MsG0580028977.01.T01:intron 35.0%
TTTGTTGAAACCGTCACTAT+TGG - Chr5:89847162-89847181 None:intergenic 35.0%
! ACCTCAATCTACAACTTTTC+CGG - Chr5:89846078-89846097 None:intergenic 35.0%
! TGTATACAGAAGTATGGTGA+AGG + Chr5:89845906-89845925 MsG0580028977.01.T01:CDS 35.0%
! TTTTGTCCACAGACAAACAA+AGG - Chr5:89845804-89845823 None:intergenic 35.0%
!! CTTTTTCATCTCATTCACCA+TGG + Chr5:89847106-89847125 MsG0580028977.01.T01:CDS 35.0%
!!! GAGCTTGTTTTGTAATCTGA+AGG + Chr5:89846352-89846371 MsG0580028977.01.T01:intron 35.0%
ACATCATTAGCTGTTCTACC+CGG - Chr5:89846964-89846983 None:intergenic 40.0%
ATGGAGAAGAGTAAGACTAG+AGG + Chr5:89845834-89845853 MsG0580028977.01.T01:CDS 40.0%
ATTGATTGCTGCAAGACTTC+CGG + Chr5:89846942-89846961 MsG0580028977.01.T01:CDS 40.0%
CACACATTTGCGCAAGAATA+TGG + Chr5:89846999-89847018 MsG0580028977.01.T01:CDS 40.0%
GATGAAAAAGTTCGAGGTTG+AGG - Chr5:89847096-89847115 None:intergenic 40.0%
GGAAAAGTTGTAGATTGAGG+TGG + Chr5:89846077-89846096 MsG0580028977.01.T01:CDS 40.0%
TGCATACATACCTGTTTCCT+AGG - Chr5:89846183-89846202 None:intergenic 40.0%
TGGACAAAAGCAAGTGCATA+TGG + Chr5:89845815-89845834 MsG0580028977.01.T01:CDS 40.0%
TTAAGGTTACACAAGCTCCT+AGG + Chr5:89846163-89846182 MsG0580028977.01.T01:CDS 40.0%
! AAAAGGTGCATGGACATATG+AGG + Chr5:89845863-89845882 MsG0580028977.01.T01:CDS 40.0%
! ACTTGTTACATGTACTTGGC+AGG + Chr5:89846040-89846059 MsG0580028977.01.T01:intron 40.0%
! AGAAGTATGGTGAAGGAAAG+TGG + Chr5:89845913-89845932 MsG0580028977.01.T01:CDS 40.0%
! CATTTAGTTCCACAAAGAGC+AGG + Chr5:89845936-89845955 MsG0580028977.01.T01:CDS 40.0%
AAGCAATCACCGACAGTACT+GGG - Chr5:89847402-89847421 None:intergenic 45.0%
ATTCAACCGTGTCTTCCATG+TGG + Chr5:89847271-89847290 MsG0580028977.01.T01:CDS 45.0%
GCCGGAAAAGTTGTAGATTG+AGG + Chr5:89846074-89846093 MsG0580028977.01.T01:CDS 45.0%
GTGACGGTTTCAACAAACGA+TGG + Chr5:89847165-89847184 MsG0580028977.01.T01:CDS 45.0%
TACACAAGCTCCTAGGAAAC+AGG + Chr5:89846170-89846189 MsG0580028977.01.T01:CDS 45.0%
TACTGTCGGTGATTGCTTCT+GGG + Chr5:89847404-89847423 MsG0580028977.01.T01:CDS 45.0%
TGAGGAAGACAAGCTACTCA+AGG + Chr5:89845881-89845900 MsG0580028977.01.T01:CDS 45.0%
TGGCAGGATTAAATAGGTGC+CGG + Chr5:89846056-89846075 MsG0580028977.01.T01:intron 45.0%
TTGATTGCTGCAAGACTTCC+GGG + Chr5:89846943-89846962 MsG0580028977.01.T01:CDS 45.0%
! GAGGTTTGAGAAAAGGTGCA+TGG + Chr5:89845853-89845872 MsG0580028977.01.T01:CDS 45.0%
!!! ATATTTTATATTTTTATAGA+TGG + Chr5:89846917-89846936 MsG0580028977.01.T01:intron 5.0%
!!! TTAAGAATATAATATTTTTT+TGG - Chr5:89846275-89846294 None:intergenic 5.0%
AACCGTGTCTTCCATGTGGT+GGG + Chr5:89847275-89847294 MsG0580028977.01.T01:CDS 50.0%
ACTGAAGGACCCAGTACTGT+CGG + Chr5:89847390-89847409 MsG0580028977.01.T01:CDS 50.0%
CAACAAACTCTCCCACCACA+TGG - Chr5:89847289-89847308 None:intergenic 50.0%
GAAGCAATCACCGACAGTAC+TGG - Chr5:89847403-89847422 None:intergenic 50.0%
GGTATGTATGCATGCTGCCA+AGG + Chr5:89846191-89846210 MsG0580028977.01.T01:intron 50.0%
GTACTGTCGGTGATTGCTTC+TGG + Chr5:89847403-89847422 MsG0580028977.01.T01:CDS 50.0%
CAACCGTGTCTTCCATGTGG+TGG + Chr5:89847274-89847293 MsG0580028977.01.T01:CDS 55.0%
CTCCCACCACATGGAAGACA+CGG - Chr5:89847280-89847299 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 89845798 89847476 89845798 ID=MsG0580028977.01;Name=MsG0580028977.01
Chr5 mRNA 89845798 89847476 89845798 ID=MsG0580028977.01.T01;Parent=MsG0580028977.01;Name=MsG0580028977.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|1|1|1|3|0|276
Chr5 exon 89845798 89845957 89845798 ID=MsG0580028977.01.T01:exon:26015;Parent=MsG0580028977.01.T01
Chr5 exon 89846062 89846191 89846062 ID=MsG0580028977.01.T01:exon:26016;Parent=MsG0580028977.01.T01
Chr5 exon 89846936 89847476 89846936 ID=MsG0580028977.01.T01:exon:26017;Parent=MsG0580028977.01.T01
Chr5 CDS 89845798 89845957 89845798 ID=MsG0580028977.01.T01:cds;Parent=MsG0580028977.01.T01
Chr5 CDS 89846062 89846191 89846062 ID=MsG0580028977.01.T01:cds;Parent=MsG0580028977.01.T01
Chr5 CDS 89846936 89847476 89846936 ID=MsG0580028977.01.T01:cds;Parent=MsG0580028977.01.T01
Gene Sequence

>MsG0580028977.01.T01

ATGCCTTTGTTTGTCTGTGGACAAAAGCAAGTGCATATGGAGAAGAGTAAGACTAGAGGTTTGAGAAAAGGTGCATGGACATATGAGGAAGACAAGCTACTCAAGGCTTGTATACAGAAGTATGGTGAAGGAAAGTGGCATTTAGTTCCACAAAGAGCAGGATTAAATAGGTGCCGGAAAAGTTGTAGATTGAGGTGGTTAAATTATTTAAATCCCACCATTAATAGAGAAAGTTTTTCTGAGGATGAAGTTGATATGATTTTAAGGTTACACAAGCTCCTAGGAAACAGATGGTCATTGATTGCTGCAAGACTTCCGGGTAGAACAGCTAATGATGTGAAGAATTATTGGCACACACATTTGCGCAAGAATATGGTTTCAAGAAAAGAAGAAAAGAAAGAAAATGAGAAACCTAAAGAAAGCATGCAAACTCATGAAGTGATTAAACCTCAACCTCGAACTTTTTCATCTCATTCACCATGGTTAAATGGGAAATATAATAAATTTTTCACACCAATAGTGACGGTTTCAACAAACGATGGTACTGTTGCAAAAGATAGTGAAGTAGATACTATTCTACCAATTAATGTTGATGGAGATTGTGCCGCACAACCATATCTTGAAAATTCAACCGTGTCTTCCATGTGGTGGGAGAGTTTGTTGAACGTGAGCAATGACAAAATTGGATCATGCTCTTTACTATTACCAGAGGAATATTCCAAATTAAATGTTGATAACTTTCTTACTGAAGGACCCAGTACTGTCGGTGATTGCTTCTGGGATTCTACCATTTGTGAATTTGACTCTCTTTTAGATGATATCTTAAATTAG

Protein sequence

>MsG0580028977.01.T01

MPLFVCGQKQVHMEKSKTRGLRKGAWTYEEDKLLKACIQKYGEGKWHLVPQRAGLNRCRKSCRLRWLNYLNPTINRESFSEDEVDMILRLHKLLGNRWSLIAARLPGRTANDVKNYWHTHLRKNMVSRKEEKKENEKPKESMQTHEVIKPQPRTFSSHSPWLNGKYNKFFTPIVTVSTNDGTVAKDSEVDTILPINVDGDCAAQPYLENSTVSSMWWESLLNVSNDKIGSCSLLLPEEYSKLNVDNFLTEGPSTVGDCFWDSTICEFDSLLDDILN*