AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028960.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028960.01.T01 MTR_5g078800 87.640 267 25 2 1 261 1 265 1.09e-160 446
MsG0580028960.01.T01 MTR_5g078860 73.052 308 34 3 1 261 1 306 3.83e-148 416
MsG0580028960.01.T01 MTR_5g079220 66.148 257 69 7 3 253 17 261 9.79e-106 308
MsG0580028960.01.T01 MTR_5g079290 59.316 263 83 5 1 255 11 257 7.55e-101 295
MsG0580028960.01.T01 MTR_7g017260 59.774 266 86 9 1 254 19 275 4.58e-97 286
MsG0580028960.01.T01 MTR_0001s0360 57.795 263 83 8 1 255 1 243 1.41e-93 276
MsG0580028960.01.T01 MTR_5g079120 57.364 258 91 6 1 255 55 296 1.08e-92 276
MsG0580028960.01.T01 MTR_5g078950 54.406 261 92 4 1 241 1 254 2.06e-91 271
MsG0580028960.01.T01 MTR_8g060940 60.938 256 76 6 1 255 1 233 3.73e-89 265
MsG0580028960.01.T01 MTR_5g078910 52.613 287 84 7 1 239 1 283 1.74e-83 252
MsG0580028960.01.T01 MTR_5g078930 55.794 233 78 5 1 230 3 213 3.88e-79 238
MsG0580028960.01.T01 MTR_0193s0090 57.921 202 66 4 1 199 1 186 1.41e-69 213
MsG0580028960.01.T01 MTR_0247s0040 74.324 148 35 1 1 148 1 145 3.51e-66 204
MsG0580028960.01.T01 MTR_0197s0010 46.667 195 91 3 11 199 5 192 2.70e-55 177
MsG0580028960.01.T01 MTR_4g125520 54.422 147 64 1 6 152 11 154 8.84e-49 163
MsG0580028960.01.T01 MTR_3g083540 63.551 107 39 0 6 112 40 146 5.29e-45 153
MsG0580028960.01.T01 MTR_7g115650 64.151 106 38 0 6 111 11 116 7.95e-45 150
MsG0580028960.01.T01 MTR_0023s0210 79.518 83 17 0 1 83 1 83 3.62e-44 144
MsG0580028960.01.T01 MTR_0251s0050 57.600 125 53 0 2 126 8 132 4.59e-44 150
MsG0580028960.01.T01 MTR_0008s0470 49.007 151 70 1 2 145 8 158 6.94e-44 150
MsG0580028960.01.T01 MTR_0008s0390 55.645 124 55 0 2 125 8 131 4.39e-43 147
MsG0580028960.01.T01 MTR_8g020490 64.762 105 37 0 7 111 8 112 8.52e-43 146
MsG0580028960.01.T01 MTR_7g096930 52.713 129 61 0 6 134 11 139 1.89e-42 146
MsG0580028960.01.T01 MTR_1g043050 56.757 111 48 0 5 115 10 120 5.99e-42 144
MsG0580028960.01.T01 MTR_1g076150 53.543 127 56 1 6 132 11 134 6.11e-42 144
MsG0580028960.01.T01 MTR_1g043080 56.481 108 47 0 5 112 10 117 8.58e-42 144
MsG0580028960.01.T01 MTR_7g117730 60.377 106 42 0 6 111 11 116 9.90e-42 144
MsG0580028960.01.T01 MTR_8g027345 61.321 106 41 0 6 111 11 116 1.07e-41 145
MsG0580028960.01.T01 MTR_5g079670 60.377 106 42 0 7 112 11 116 1.59e-41 142
MsG0580028960.01.T01 MTR_4g100720 60.526 114 43 1 7 118 13 126 3.85e-41 139
MsG0580028960.01.T01 MTR_3g077110 39.286 224 116 6 7 214 12 231 3.96e-41 144
MsG0580028960.01.T01 MTR_1g100653 59.434 106 43 0 6 111 11 116 4.77e-41 143
MsG0580028960.01.T01 MTR_4g091490 57.658 111 47 0 2 112 8 118 4.95e-41 144
MsG0580028960.01.T01 MTR_2g089450 49.640 139 68 2 6 144 11 147 6.26e-41 141
MsG0580028960.01.T01 MTR_5g029840 61.682 107 41 0 6 112 11 117 9.43e-41 143
MsG0580028960.01.T01 MTR_2g011660 57.658 111 47 0 2 112 8 118 1.03e-40 143
MsG0580028960.01.T01 MTR_4g073420 59.615 104 42 0 9 112 14 117 3.58e-40 140
MsG0580028960.01.T01 MTR_3g074520 58.879 107 44 0 6 112 11 117 1.15e-39 140
MsG0580028960.01.T01 MTR_2g089620 58.879 107 44 0 6 112 11 117 1.58e-39 140
MsG0580028960.01.T01 MTR_3g039990 51.163 129 63 0 6 134 12 140 3.94e-39 138
MsG0580028960.01.T01 MTR_3g097450 49.645 141 68 1 9 149 14 151 5.75e-39 137
MsG0580028960.01.T01 MTR_7g110830 60.000 105 42 0 7 111 12 116 1.02e-38 139
MsG0580028960.01.T01 MTR_7g010210 57.547 106 45 0 6 111 11 116 1.07e-38 137
MsG0580028960.01.T01 MTR_7g010210 57.547 106 45 0 6 111 11 116 1.13e-38 136
MsG0580028960.01.T01 MTR_5g007370 41.111 180 84 3 6 185 11 168 1.60e-38 136
MsG0580028960.01.T01 MTR_4g478180 57.009 107 46 0 6 112 12 118 2.52e-38 137
MsG0580028960.01.T01 MTR_4g082230 59.091 110 44 1 2 111 8 116 2.66e-38 138
MsG0580028960.01.T01 MTR_4g485530 59.434 106 43 0 9 114 14 119 2.85e-38 133
MsG0580028960.01.T01 MTR_3g461490 59.048 105 43 0 7 111 12 116 4.76e-38 136
MsG0580028960.01.T01 MTR_4g105130 48.276 145 58 2 7 134 12 156 4.95e-38 137
MsG0580028960.01.T01 MTR_1g085640 59.048 105 43 0 7 111 12 116 5.05e-38 137
MsG0580028960.01.T01 MTR_4g082290 58.491 106 44 0 6 111 11 116 5.93e-38 137
MsG0580028960.01.T01 MTR_1g112760 46.795 156 65 4 7 148 13 164 6.83e-38 133
MsG0580028960.01.T01 MTR_2g089420 53.271 107 50 0 6 112 10 116 1.33e-37 137
MsG0580028960.01.T01 MTR_2g034790 55.660 106 47 0 6 111 11 116 1.39e-37 135
MsG0580028960.01.T01 MTR_8g017440 57.143 105 45 0 7 111 12 116 1.62e-37 135
MsG0580028960.01.T01 MTR_8g017540 55.660 106 47 0 7 112 58 163 1.83e-37 136
MsG0580028960.01.T01 MTR_6g009430 56.604 106 46 0 7 112 12 117 2.16e-37 134
MsG0580028960.01.T01 MTR_7g011170 56.604 106 46 0 6 111 11 116 5.76e-37 132
MsG0580028960.01.T01 MTR_0140s0030 55.660 106 47 0 6 111 12 117 9.33e-37 133
MsG0580028960.01.T01 MTR_0489s0020 55.660 106 47 0 6 111 12 117 9.33e-37 133
MsG0580028960.01.T01 MTR_0008s0280 48.148 135 67 2 6 137 11 145 9.81e-37 130
MsG0580028960.01.T01 MTR_4g121460 54.717 106 48 0 6 111 11 116 1.09e-36 132
MsG0580028960.01.T01 MTR_1g100667 52.846 123 57 1 1 122 6 128 1.19e-36 131
MsG0580028960.01.T01 MTR_6g012690 56.604 106 46 0 6 111 11 116 1.66e-36 132
MsG0580028960.01.T01 MTR_7g087130 55.660 106 47 0 6 111 11 116 1.71e-36 132
MsG0580028960.01.T01 MTR_1g085040 57.143 105 45 0 7 111 12 116 2.48e-36 132
MsG0580028960.01.T01 MTR_6g055910 55.046 109 49 0 8 116 15 123 3.61e-36 130
MsG0580028960.01.T01 MTR_8g095390 55.340 103 46 0 9 111 14 116 3.83e-36 130
MsG0580028960.01.T01 MTR_6g012180 59.000 100 41 0 6 105 11 110 9.01e-36 130
MsG0580028960.01.T01 MTR_5g014990 50.847 118 57 1 7 123 12 129 1.88e-35 129
MsG0580028960.01.T01 MTR_0063s0090 53.398 103 48 0 6 108 11 113 2.12e-35 126
MsG0580028960.01.T01 MTR_8g017500 53.271 107 50 0 5 111 10 116 2.12e-35 129
MsG0580028960.01.T01 MTR_7g076740 46.043 139 72 2 5 140 10 148 2.66e-35 128
MsG0580028960.01.T01 MTR_1g017140 49.573 117 58 1 7 122 12 128 3.27e-35 129
MsG0580028960.01.T01 MTR_2g099740 53.704 108 50 0 5 112 10 117 3.37e-35 130
MsG0580028960.01.T01 MTR_8g031360 54.630 108 48 1 6 112 12 119 4.87e-35 127
MsG0580028960.01.T01 MTR_5g042030 51.786 112 54 0 1 112 1 112 5.09e-35 127
MsG0580028960.01.T01 MTR_1g017000 52.336 107 50 1 7 112 12 118 7.56e-35 125
MsG0580028960.01.T01 MTR_3g103570 46.154 130 68 2 7 135 12 140 9.03e-35 128
MsG0580028960.01.T01 MTR_8g017390 55.140 107 47 1 7 112 12 118 1.26e-34 130
MsG0580028960.01.T01 MTR_2g097910 53.333 105 49 0 7 111 20 124 1.75e-34 126
MsG0580028960.01.T01 MTR_4g065017 54.286 105 48 0 7 111 17 121 3.42e-34 126
MsG0580028960.01.T01 MTR_4g102380 55.140 107 48 0 6 112 11 117 4.29e-34 124
MsG0580028960.01.T01 MTR_8g098860 52.381 105 50 0 7 111 12 116 4.90e-34 125
MsG0580028960.01.T01 MTR_2g064160 50.000 108 54 0 7 114 11 118 5.46e-34 125
MsG0580028960.01.T01 MTR_6g090405 54.206 107 48 1 7 112 12 118 5.49e-34 124
MsG0580028960.01.T01 MTR_7g111290 60.204 98 39 0 7 104 12 109 5.86e-34 126
MsG0580028960.01.T01 MTR_1g110460 54.286 105 48 0 7 111 26 130 6.75e-34 125
MsG0580028960.01.T01 MTR_7g102110 55.140 107 47 1 7 112 12 118 1.99e-33 122
MsG0580028960.01.T01 MTR_8g017340 53.271 107 49 1 7 112 12 118 2.24e-33 126
MsG0580028960.01.T01 MTR_4g057635 55.140 107 47 1 7 112 12 118 3.06e-33 123
MsG0580028960.01.T01 MTR_3g052430 50.962 104 51 0 7 110 41 144 3.88e-33 126
MsG0580028960.01.T01 MTR_3g052450 50.962 104 51 0 7 110 40 143 4.67e-33 126
MsG0580028960.01.T01 MTR_3g028740 52.381 105 50 0 7 111 22 126 5.47e-33 123
MsG0580028960.01.T01 MTR_2g096380 51.376 109 53 0 7 115 6 114 5.89e-33 120
MsG0580028960.01.T01 MTR_8g017350 52.336 107 50 1 7 112 12 118 1.24e-32 125
MsG0580028960.01.T01 MTR_7g035075 49.573 117 57 1 7 123 14 128 1.35e-32 119
MsG0580028960.01.T01 MTR_1g073170 50.407 123 58 1 8 130 21 140 2.13e-32 119
MsG0580028960.01.T01 MTR_5g078140 54.717 106 48 0 6 111 11 116 2.58e-32 120
MsG0580028960.01.T01 MTR_3g065440 54.717 106 48 0 6 111 11 116 3.68e-32 120
MsG0580028960.01.T01 MTR_7g109320 36.150 213 104 4 6 187 11 222 3.90e-32 121
MsG0580028960.01.T01 MTR_3g011610 49.524 105 53 0 7 111 37 141 4.56e-32 123
MsG0580028960.01.T01 MTR_2g095520 57.000 100 42 1 7 105 12 111 5.03e-32 120
MsG0580028960.01.T01 MTR_2g067420 52.525 99 47 0 7 105 14 112 7.43e-32 120
MsG0580028960.01.T01 MTR_1g045610 49.593 123 59 1 8 130 22 141 8.62e-32 118
MsG0580028960.01.T01 MTR_4g097570 54.545 99 44 1 7 104 12 110 1.28e-31 118
MsG0580028960.01.T01 MTR_1g086510 51.818 110 53 0 2 111 16 125 1.52e-31 117
MsG0580028960.01.T01 MTR_5g010020 52.525 99 47 0 7 105 12 110 1.63e-31 119
MsG0580028960.01.T01 MTR_8g042410 50.459 109 52 1 4 110 32 140 2.51e-31 121
MsG0580028960.01.T01 MTR_4g063100 49.074 108 55 0 8 115 8 115 2.76e-31 116
MsG0580028960.01.T01 MTR_6g006030 51.429 105 51 0 7 111 14 118 6.81e-31 114
MsG0580028960.01.T01 MTR_1g062940 48.649 111 57 0 7 117 6 116 1.72e-30 113
MsG0580028960.01.T01 MTR_4g128670 54.000 100 45 1 7 105 12 111 1.94e-30 116
MsG0580028960.01.T01 MTR_2g088170 49.524 105 53 0 6 110 28 132 2.87e-30 117
MsG0580028960.01.T01 MTR_4g097570 54.000 100 44 2 7 104 12 111 4.56e-30 114
MsG0580028960.01.T01 MTR_1g086530 48.182 110 57 0 2 111 28 137 1.06e-29 113
MsG0580028960.01.T01 MTR_1g021230 48.077 104 54 0 7 110 57 160 7.87e-29 114
MsG0580028960.01.T01 MTR_1g083630 46.296 108 58 0 4 111 9 116 5.22e-28 112
MsG0580028960.01.T01 MTR_5g079140 42.308 156 53 5 84 230 7 134 2.67e-27 103
MsG0580028960.01.T01 MTR_0023s0260 41.379 174 83 8 91 253 10 175 5.67e-27 103
MsG0580028960.01.T01 MTR_5g088080 46.154 104 55 1 7 109 12 115 4.71e-26 103
MsG0580028960.01.T01 MTR_5g088150 46.154 104 55 1 7 109 12 115 4.71e-26 103
MsG0580028960.01.T01 MTR_5g488210 46.154 104 55 1 7 109 12 115 4.71e-26 103
MsG0580028960.01.T01 MTR_3g045430 42.727 110 63 0 2 111 8 117 5.60e-26 103
MsG0580028960.01.T01 MTR_5g488170 46.154 104 55 1 7 109 12 115 5.79e-26 102
MsG0580028960.01.T01 MTR_5g088640 46.154 104 55 1 7 109 12 115 7.13e-26 102
MsG0580028960.01.T01 MTR_2g033170 50.485 103 51 0 7 109 24 126 8.09e-26 103
MsG0580028960.01.T01 MTR_6g055910 57.143 77 33 0 40 116 18 94 1.01e-25 102
MsG0580028960.01.T01 MTR_5g062790 46.154 104 55 1 7 109 9 112 1.13e-25 102
MsG0580028960.01.T01 MTR_5g007300 56.410 78 34 0 6 83 63 140 2.82e-25 97.8
MsG0580028960.01.T01 MTR_4g019370 41.379 116 67 1 9 124 38 152 3.41e-25 102
MsG0580028960.01.T01 MTR_4g123040 48.148 108 56 0 2 109 19 126 1.82e-24 100
MsG0580028960.01.T01 MTR_4g094982 44.118 102 56 1 9 110 5 105 3.61e-24 98.2
MsG0580028960.01.T01 MTR_5g088610 45.192 104 56 1 7 109 9 112 5.98e-24 99.4
MsG0580028960.01.T01 MTR_7g111290 63.636 66 24 0 39 104 2 67 2.54e-23 97.4
MsG0580028960.01.T01 MTR_2g096380 57.143 77 33 0 39 115 19 95 3.26e-23 94.4
MsG0580028960.01.T01 MTR_5g049190 42.308 104 59 1 7 110 17 119 3.54e-23 95.1
MsG0580028960.01.T01 MTR_7g037260 42.202 109 62 1 7 115 143 250 4.75e-23 96.7
MsG0580028960.01.T01 MTR_5g016510 42.157 102 58 1 9 110 5 105 9.40e-23 95.5
MsG0580028960.01.T01 MTR_8g006470 44.231 104 57 1 7 109 10 113 9.64e-23 94.7
MsG0580028960.01.T01 MTR_4g029540 37.857 140 78 3 2 132 4 143 1.89e-22 94.0
MsG0580028960.01.T01 MTR_4g063100 54.545 77 35 0 39 115 10 86 2.48e-22 92.4
MsG0580028960.01.T01 MTR_3g101290 42.718 103 58 1 9 111 37 138 2.76e-22 92.0
MsG0580028960.01.T01 MTR_1g026870 40.777 103 60 1 9 111 85 186 2.84e-22 96.3
MsG0580028960.01.T01 MTR_1g026870 29.851 134 86 3 4 136 28 154 8.68e-12 65.5
MsG0580028960.01.T01 MTR_4g128190 38.406 138 65 4 5 135 9 133 4.54e-22 92.0
MsG0580028960.01.T01 MTR_3g089045 35.915 142 85 2 2 143 9 144 5.47e-22 92.8
MsG0580028960.01.T01 MTR_4g082040 42.157 102 58 1 9 110 105 205 6.51e-22 94.4
MsG0580028960.01.T01 MTR_7g061330 43.689 103 57 1 9 111 113 214 6.65e-22 95.1
MsG0580028960.01.T01 MTR_7g461410 43.689 103 57 1 9 111 113 214 6.65e-22 95.1
MsG0580028960.01.T01 MTR_4g105660 42.857 105 57 2 7 110 178 280 8.99e-22 94.0
MsG0580028960.01.T01 MTR_7g061330 43.689 103 57 1 9 111 77 178 1.12e-21 94.4
MsG0580028960.01.T01 MTR_7g086960 33.533 167 90 3 9 175 89 234 1.62e-21 92.4
MsG0580028960.01.T01 MTR_5g041570 41.176 102 59 1 9 110 134 234 1.63e-21 93.2
MsG0580028960.01.T01 MTR_3g077650 41.667 108 60 2 9 115 181 286 2.16e-21 93.2
MsG0580028960.01.T01 MTR_3g463400 34.266 143 87 2 9 151 133 268 2.30e-21 92.8
MsG0580028960.01.T01 MTR_3g110028 39.806 103 61 1 9 111 85 186 3.20e-21 93.2
MsG0580028960.01.T01 MTR_3g110028 30.435 138 88 3 4 140 28 158 6.16e-12 65.9
MsG0580028960.01.T01 MTR_1g057980 41.121 107 62 1 2 108 73 178 6.63e-21 90.1
MsG0580028960.01.T01 MTR_5g070020 41.176 102 59 1 9 110 122 222 1.90e-20 89.4
MsG0580028960.01.T01 MTR_7g451170 31.847 157 102 3 9 162 191 345 2.53e-20 89.7
MsG0580028960.01.T01 MTR_6g074860 40.404 99 58 1 9 107 4 101 3.60e-20 87.0
MsG0580028960.01.T01 MTR_6g027340 42.268 97 55 1 9 105 16 111 4.65e-20 85.9
MsG0580028960.01.T01 MTR_6g015455 41.509 106 53 2 9 110 5 105 7.43e-20 89.4
MsG0580028960.01.T01 MTR_6g027360 41.414 99 57 1 7 105 76 173 1.14e-19 86.7
MsG0580028960.01.T01 MTR_4g088015 38.835 103 62 1 7 109 219 320 1.51e-19 87.8
MsG0580028960.01.T01 MTR_7g061550 40.179 112 59 2 12 121 10 115 2.72e-19 86.3
MsG0580028960.01.T01 MTR_7g035350 42.000 100 57 1 9 108 225 323 5.06e-19 86.3
MsG0580028960.01.T01 MTR_1g085880 42.857 105 58 2 7 109 11 115 3.54e-18 80.5
MsG0580028960.01.T01 MTR_6g027370 40.196 102 60 1 9 110 99 199 6.02e-18 82.4
MsG0580028960.01.T01 MTR_1g085770 42.857 105 58 2 7 109 11 115 8.60e-18 81.6
MsG0580028960.01.T01 MTR_7g037130 37.500 112 67 2 7 118 143 251 1.39e-17 81.6
MsG0580028960.01.T01 MTR_5g082910 37.864 103 55 2 9 107 19 116 2.23e-17 80.1
MsG0580028960.01.T01 MTR_7g450950 32.308 130 86 2 1 130 149 276 2.45e-17 80.5
MsG0580028960.01.T01 MTR_5g010650 38.542 96 58 1 9 104 110 204 9.07e-16 77.0
MsG0580028960.01.T01 MTR_2g088730 66.667 39 13 0 65 103 34 72 3.73e-14 66.6
MsG0580028960.01.T01 MTR_8g468380 30.657 137 94 1 11 147 24 159 2.22e-13 69.7
MsG0580028960.01.T01 MTR_5g038910 34.653 101 65 1 11 111 28 127 2.89e-13 69.3
MsG0580028960.01.T01 MTR_5g038910 34.653 101 65 1 11 111 28 127 3.42e-13 68.9
MsG0580028960.01.T01 MTR_6g055910 53.846 52 24 0 65 116 2 53 3.86e-13 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028960.01.T01 AT1G66370 50.226 221 88 4 2 211 3 212 2.33e-61 194
MsG0580028960.01.T01 AT1G56650 61.644 146 55 1 4 148 5 150 7.32e-53 172
MsG0580028960.01.T01 AT1G66380 77.273 110 25 0 4 113 5 114 7.03e-52 166
MsG0580028960.01.T01 AT1G66390 62.585 147 53 1 4 148 5 151 2.16e-51 168
MsG0580028960.01.T01 AT3G13540 63.551 107 39 0 6 112 22 128 8.91e-46 154
MsG0580028960.01.T01 AT2G16720 60.377 106 42 0 9 114 14 119 5.21e-42 145
MsG0580028960.01.T01 AT5G35550 58.261 115 47 1 7 121 14 127 5.34e-42 144
MsG0580028960.01.T01 AT4G09460 43.017 179 88 3 9 179 14 186 3.72e-41 142
MsG0580028960.01.T01 AT5G14750 55.752 113 50 0 8 120 17 129 3.79e-41 140
MsG0580028960.01.T01 AT4G38620 61.538 104 40 0 9 112 14 117 4.00e-41 143
MsG0580028960.01.T01 AT5G16770 59.813 107 43 0 6 112 11 117 9.47e-41 143
MsG0580028960.01.T01 AT5G16770 59.813 107 43 0 6 112 11 117 9.47e-41 143
MsG0580028960.01.T01 AT4G05100 57.658 111 47 0 2 112 8 118 1.02e-40 143
MsG0580028960.01.T01 AT5G16770 59.813 107 43 0 6 112 11 117 1.21e-40 143
MsG0580028960.01.T01 AT5G16770 59.813 107 43 0 6 112 11 117 1.21e-40 143
MsG0580028960.01.T01 AT1G22640 58.491 106 44 0 9 114 14 119 1.25e-40 141
MsG0580028960.01.T01 AT4G17785 58.559 111 46 0 2 112 8 118 2.02e-40 143
MsG0580028960.01.T01 AT4G17785 58.559 111 46 0 2 112 8 118 2.37e-40 143
MsG0580028960.01.T01 AT3G02940 59.813 107 43 0 6 112 11 117 3.75e-40 141
MsG0580028960.01.T01 AT4G21440 58.879 107 44 0 6 112 11 117 5.13e-40 142
MsG0580028960.01.T01 AT3G23250 44.910 167 81 3 6 170 11 168 5.62e-40 140
MsG0580028960.01.T01 AT3G02940 59.813 107 43 0 6 112 11 117 6.35e-40 140
MsG0580028960.01.T01 AT3G02940 59.813 107 43 0 6 112 11 117 6.35e-40 140
MsG0580028960.01.T01 AT5G40330 58.654 104 43 0 8 111 13 116 6.37e-40 138
MsG0580028960.01.T01 AT4G34990 58.491 106 44 0 9 114 14 119 7.87e-40 139
MsG0580028960.01.T01 AT3G27920 57.143 105 45 0 8 112 15 119 1.03e-39 137
MsG0580028960.01.T01 AT4G28110 57.009 107 46 0 6 112 11 117 1.15e-39 139
MsG0580028960.01.T01 AT3G30210 34.981 263 145 7 6 260 26 270 1.25e-39 139
MsG0580028960.01.T01 AT5G52600 53.659 123 51 1 7 129 12 128 3.10e-39 135
MsG0580028960.01.T01 AT5G60890 56.881 109 47 0 3 111 8 116 3.64e-39 138
MsG0580028960.01.T01 AT5G65230 57.944 107 45 0 6 112 11 117 4.44e-39 138
MsG0580028960.01.T01 AT3G61250 57.009 107 46 0 6 112 11 117 6.24e-39 137
MsG0580028960.01.T01 AT4G01680 60.000 105 42 0 7 111 12 116 7.18e-39 136
MsG0580028960.01.T01 AT1G06180 52.991 117 55 0 6 122 11 127 8.36e-39 136
MsG0580028960.01.T01 AT5G10280 57.944 107 45 0 6 112 11 117 1.09e-38 138
MsG0580028960.01.T01 AT1G35515 41.808 177 94 4 7 180 12 182 2.06e-38 134
MsG0580028960.01.T01 AT5G54230 58.491 106 44 0 7 112 12 117 2.13e-38 137
MsG0580028960.01.T01 AT4G01680 60.000 105 42 0 7 111 12 116 2.17e-38 137
MsG0580028960.01.T01 AT1G18570 56.881 109 47 0 6 114 12 120 2.30e-38 137
MsG0580028960.01.T01 AT5G56110 60.000 105 42 0 7 111 12 116 2.87e-38 136
MsG0580028960.01.T01 AT5G07700 57.009 107 46 0 6 112 11 117 3.28e-38 137
MsG0580028960.01.T01 AT5G07700 57.009 107 46 0 6 112 11 117 3.28e-38 137
MsG0580028960.01.T01 AT5G07690 55.963 109 48 0 6 114 11 119 3.39e-38 137
MsG0580028960.01.T01 AT2G31180 57.547 106 45 0 6 111 11 116 5.09e-38 134
MsG0580028960.01.T01 AT1G57560 39.024 205 101 4 7 194 12 209 5.22e-38 135
MsG0580028960.01.T01 AT1G57560 57.407 108 46 0 7 114 12 119 8.03e-38 134
MsG0580028960.01.T01 AT3G47600 58.491 106 44 0 6 111 11 116 1.06e-37 135
MsG0580028960.01.T01 AT3G48920 49.194 124 63 0 1 124 12 135 1.08e-37 133
MsG0580028960.01.T01 AT1G74650 55.357 112 50 0 7 118 12 123 1.23e-37 135
MsG0580028960.01.T01 AT1G74080 52.679 112 53 0 3 114 8 119 1.42e-37 135
MsG0580028960.01.T01 AT5G15310 56.075 107 47 0 6 112 11 117 1.50e-37 135
MsG0580028960.01.T01 AT5G15310 56.075 107 47 0 6 112 11 117 2.04e-37 134
MsG0580028960.01.T01 AT5G15310 56.075 107 47 0 6 112 11 117 2.26e-37 132
MsG0580028960.01.T01 AT5G61420 55.140 107 48 0 6 112 11 117 2.79e-37 135
MsG0580028960.01.T01 AT3G01140 57.009 107 46 0 6 112 11 117 3.12e-37 134
MsG0580028960.01.T01 AT1G08810 49.219 128 63 1 6 133 11 136 3.14e-37 132
MsG0580028960.01.T01 AT5G62470 54.783 115 52 0 6 120 11 125 3.78e-37 134
MsG0580028960.01.T01 AT1G34670 57.944 107 45 0 6 112 11 117 4.38e-37 134
MsG0580028960.01.T01 AT5G49330 55.660 106 47 0 6 111 11 116 4.46e-37 134
MsG0580028960.01.T01 AT1G74430 55.046 109 49 0 6 114 11 119 4.74e-37 132
MsG0580028960.01.T01 AT1G16490 48.819 127 64 1 2 128 10 135 5.66e-37 132
MsG0580028960.01.T01 AT3G13890 55.660 106 47 0 7 112 12 117 7.49e-37 134
MsG0580028960.01.T01 AT5G26660 58.095 105 44 0 7 111 12 116 8.30e-37 133
MsG0580028960.01.T01 AT3G01140 57.009 107 46 0 6 112 54 160 9.85e-37 134
MsG0580028960.01.T01 AT3G28910 57.547 106 45 0 6 111 11 116 1.09e-36 132
MsG0580028960.01.T01 AT5G57620 43.038 158 89 1 7 163 12 169 2.37e-36 132
MsG0580028960.01.T01 AT1G09540 56.190 105 46 0 7 111 12 116 5.51e-36 131
MsG0580028960.01.T01 AT5G65790 48.819 127 64 1 7 132 12 138 1.11e-35 131
MsG0580028960.01.T01 AT5G12870 52.294 109 52 0 3 111 14 122 1.11e-35 129
MsG0580028960.01.T01 AT1G66380 72.093 86 24 0 4 89 5 90 1.33e-35 123
MsG0580028960.01.T01 AT5G62470 54.783 115 51 1 6 120 11 124 1.50e-35 130
MsG0580028960.01.T01 AT5G62320 40.571 175 96 3 6 172 12 186 3.52e-35 126
MsG0580028960.01.T01 AT2G47460 52.830 106 50 0 6 111 11 116 4.72e-35 129
MsG0580028960.01.T01 AT3G62610 54.717 106 48 0 6 111 11 116 6.20e-35 128
MsG0580028960.01.T01 AT4G01680 53.846 117 42 1 7 111 12 128 7.04e-35 128
MsG0580028960.01.T01 AT3G28470 56.566 99 43 0 7 105 12 110 8.25e-35 127
MsG0580028960.01.T01 AT4G22680 55.140 107 48 0 6 112 11 117 1.03e-34 125
MsG0580028960.01.T01 AT4G25560 33.865 251 150 5 8 255 11 248 1.05e-34 126
MsG0580028960.01.T01 AT4G37780 51.351 111 53 1 6 115 11 121 2.49e-34 125
MsG0580028960.01.T01 AT5G23000 55.357 112 48 2 2 112 8 118 3.68e-34 126
MsG0580028960.01.T01 AT3G49690 54.545 110 49 1 7 115 12 121 3.76e-34 125
MsG0580028960.01.T01 AT3G46130 51.304 115 56 0 1 115 3 117 4.54e-34 124
MsG0580028960.01.T01 AT1G18710 51.887 106 51 0 6 111 11 116 4.54e-34 124
MsG0580028960.01.T01 AT1G79180 51.429 105 51 0 7 111 14 118 7.20e-34 124
MsG0580028960.01.T01 AT3G13890 51.304 115 47 1 7 112 12 126 7.55e-34 126
MsG0580028960.01.T01 AT1G56160 52.336 107 51 0 7 113 14 120 1.02e-33 124
MsG0580028960.01.T01 AT5G59780 53.704 108 50 0 8 115 9 116 1.53e-33 122
MsG0580028960.01.T01 AT4G13480 55.085 118 52 1 8 125 7 123 1.61e-33 122
MsG0580028960.01.T01 AT4G12350 55.660 106 47 0 7 112 12 117 1.75e-33 123
MsG0580028960.01.T01 AT3G24310 51.200 125 58 1 6 130 17 138 3.44e-33 122
MsG0580028960.01.T01 AT2G32460 50.000 106 53 0 5 110 16 121 3.85e-33 126
MsG0580028960.01.T01 AT2G32460 50.000 106 53 0 5 110 4 109 4.28e-33 125
MsG0580028960.01.T01 AT1G63910 52.381 105 50 0 7 111 12 116 6.22e-33 123
MsG0580028960.01.T01 AT1G25340 55.769 104 46 0 8 111 19 122 6.60e-33 121
MsG0580028960.01.T01 AT3G12720 49.057 106 54 0 7 112 22 127 8.44e-33 122
MsG0580028960.01.T01 AT3G08500 52.381 105 50 0 7 111 30 134 1.68e-32 122
MsG0580028960.01.T01 AT3G12820 50.000 106 53 0 7 112 14 119 2.11e-32 119
MsG0580028960.01.T01 AT5G40350 48.333 120 62 0 7 126 17 136 2.94e-32 118
MsG0580028960.01.T01 AT5G52260 56.311 103 45 0 8 110 13 115 3.98e-32 119
MsG0580028960.01.T01 AT2G47190 49.091 110 56 0 2 111 15 124 4.31e-32 119
MsG0580028960.01.T01 AT5G55020 51.456 103 50 0 7 109 26 128 4.61e-32 123
MsG0580028960.01.T01 AT3G01530 51.429 105 51 0 7 111 25 129 5.43e-32 117
MsG0580028960.01.T01 AT5G06100 48.571 105 54 0 6 110 31 135 6.49e-32 122
MsG0580028960.01.T01 AT4G26930 49.515 103 52 0 7 109 19 121 9.98e-32 120
MsG0580028960.01.T01 AT1G66230 53.774 106 49 0 6 111 11 116 9.99e-32 118
MsG0580028960.01.T01 AT2G26960 49.524 105 53 0 5 109 18 122 1.10e-31 121
MsG0580028960.01.T01 AT5G06100 48.571 105 54 0 6 110 31 135 1.59e-31 122
MsG0580028960.01.T01 AT5G06100 48.571 105 54 0 6 110 31 135 1.59e-31 122
MsG0580028960.01.T01 AT5G06100 48.571 105 54 0 6 110 31 135 1.59e-31 122
MsG0580028960.01.T01 AT5G06100 48.571 105 54 0 6 110 31 135 1.59e-31 122
MsG0580028960.01.T01 AT5G14340 52.830 106 50 0 6 111 23 128 1.89e-31 117
MsG0580028960.01.T01 AT1G48000 54.369 103 47 0 7 109 32 134 2.01e-31 116
MsG0580028960.01.T01 AT2G36890 53.271 107 49 1 7 112 12 118 3.44e-31 117
MsG0580028960.01.T01 AT2G36890 53.271 107 49 1 7 112 53 159 4.23e-31 118
MsG0580028960.01.T01 AT3G53200 50.909 110 54 0 1 110 3 112 4.54e-31 115
MsG0580028960.01.T01 AT1G68320 54.286 105 48 0 7 111 19 123 4.59e-31 117
MsG0580028960.01.T01 AT3G27810 37.297 185 104 3 7 180 20 203 1.58e-30 114
MsG0580028960.01.T01 AT5G16600 51.887 106 51 0 6 111 11 116 2.41e-30 115
MsG0580028960.01.T01 AT5G14750 59.770 87 32 1 34 120 12 95 5.16e-30 110
MsG0580028960.01.T01 AT1G66380 78.667 75 16 0 39 113 7 81 5.62e-30 108
MsG0580028960.01.T01 AT3G11440 44.643 112 58 1 3 110 33 144 5.94e-30 117
MsG0580028960.01.T01 AT3G11440 46.154 104 56 0 7 110 41 144 1.27e-29 117
MsG0580028960.01.T01 AT3G11440 46.154 104 56 0 7 110 41 144 1.27e-29 117
MsG0580028960.01.T01 AT3G11440 46.154 104 56 0 7 110 41 144 1.27e-29 117
MsG0580028960.01.T01 AT1G25340 53.846 104 43 1 8 111 19 117 1.33e-29 112
MsG0580028960.01.T01 AT1G25340 53.846 104 43 1 8 111 19 117 1.86e-29 113
MsG0580028960.01.T01 AT5G35550 63.415 82 29 1 40 121 50 130 2.57e-29 111
MsG0580028960.01.T01 AT1G79180 38.462 143 54 2 2 111 10 151 1.61e-27 108
MsG0580028960.01.T01 AT5G26660 58.442 77 32 0 35 111 9 85 3.05e-26 104
MsG0580028960.01.T01 AT2G26950 38.406 138 81 2 1 138 12 145 1.18e-25 104
MsG0580028960.01.T01 AT3G06490 49.541 109 55 0 1 109 13 121 1.30e-25 103
MsG0580028960.01.T01 AT3G53200 59.740 77 31 0 34 110 3 79 3.24e-25 99.4
MsG0580028960.01.T01 AT5G49620 49.541 109 55 0 1 109 20 128 3.35e-25 101
MsG0580028960.01.T01 AT3G47600 63.889 72 26 0 40 111 39 110 4.83e-25 101
MsG0580028960.01.T01 AT1G69560 35.971 139 82 3 6 144 104 235 1.03e-24 100
MsG0580028960.01.T01 AT5G59780 58.974 78 32 0 38 115 18 95 1.09e-24 98.2
MsG0580028960.01.T01 AT1G69560 35.971 139 82 3 6 144 120 251 1.33e-24 100
MsG0580028960.01.T01 AT3G46130 58.974 78 32 0 38 115 18 95 2.73e-24 97.8
MsG0580028960.01.T01 AT3G46130 58.442 77 32 0 39 115 9 85 4.64e-24 97.1
MsG0580028960.01.T01 AT2G39880 47.059 102 53 1 9 110 50 150 6.95e-24 99.4
MsG0580028960.01.T01 AT5G11510 43.689 103 57 1 9 111 81 182 7.94e-24 100
MsG0580028960.01.T01 AT5G11510 28.261 138 91 3 4 140 24 154 2.02e-11 64.3
MsG0580028960.01.T01 AT5G11510 43.689 103 57 1 9 111 81 182 7.94e-24 100
MsG0580028960.01.T01 AT5G11510 28.261 138 91 3 4 140 24 154 2.02e-11 64.3
MsG0580028960.01.T01 AT5G11510 43.689 103 57 1 9 111 81 182 7.94e-24 100
MsG0580028960.01.T01 AT5G11510 28.261 138 91 3 4 140 24 154 2.02e-11 64.3
MsG0580028960.01.T01 AT3G55730 45.283 106 57 1 5 110 52 156 1.09e-23 99.0
MsG0580028960.01.T01 AT5G11510 43.689 103 57 1 9 111 81 182 1.26e-23 100
MsG0580028960.01.T01 AT5G11510 28.261 138 91 3 4 140 24 154 1.87e-11 64.3
MsG0580028960.01.T01 AT5G11510 43.689 103 57 1 9 111 81 182 1.33e-23 100
MsG0580028960.01.T01 AT5G11510 28.261 138 91 3 4 140 24 154 1.66e-11 64.7
MsG0580028960.01.T01 AT4G18770 44.144 111 53 2 9 115 217 322 4.17e-23 97.8
MsG0580028960.01.T01 AT3G12820 54.286 70 32 0 43 112 2 71 7.86e-23 92.8
MsG0580028960.01.T01 AT4G37260 43.137 102 57 1 9 110 13 113 8.24e-23 95.5
MsG0580028960.01.T01 AT3G09230 42.308 104 59 1 9 112 55 157 1.29e-22 95.9
MsG0580028960.01.T01 AT5G02320 41.748 103 59 1 9 111 127 228 1.46e-22 97.1
MsG0580028960.01.T01 AT5G02320 41.748 103 59 1 9 111 127 228 1.46e-22 97.1
MsG0580028960.01.T01 AT1G71030 60.294 68 27 0 45 112 4 71 2.11e-22 91.3
MsG0580028960.01.T01 AT5G02320 41.748 103 59 1 9 111 67 168 2.26e-22 96.3
MsG0580028960.01.T01 AT2G23290 43.137 102 57 1 9 110 13 113 2.54e-22 94.0
MsG0580028960.01.T01 AT1G71030 60.294 68 27 0 45 112 18 85 2.84e-22 91.7
MsG0580028960.01.T01 AT2G37630 42.241 116 59 2 12 125 7 116 3.62e-22 94.4
MsG0580028960.01.T01 AT1G26780 42.157 102 58 1 9 110 98 198 4.10e-22 92.8
MsG0580028960.01.T01 AT3G60460 42.593 108 61 1 3 109 7 114 4.67e-22 93.2
MsG0580028960.01.T01 AT1G26780 42.157 102 58 1 9 110 98 198 5.49e-22 94.0
MsG0580028960.01.T01 AT5G49620 43.902 123 55 1 1 109 20 142 1.12e-21 92.4
MsG0580028960.01.T01 AT5G67300 44.118 102 56 1 9 110 6 106 1.13e-21 92.4
MsG0580028960.01.T01 AT5G14750 48.148 108 45 3 53 160 1 97 1.51e-21 88.2
MsG0580028960.01.T01 AT5G14750 48.148 108 45 3 53 160 1 97 1.51e-21 88.2
MsG0580028960.01.T01 AT3G50060 36.719 128 72 2 9 128 6 132 3.92e-21 90.9
MsG0580028960.01.T01 AT3G09370 41.176 102 59 1 9 110 130 230 5.52e-21 92.0
MsG0580028960.01.T01 AT3G09370 31.731 104 69 2 9 111 78 180 4.29e-11 63.2
MsG0580028960.01.T01 AT3G09370 41.176 102 59 1 9 110 135 235 5.54e-21 92.0
MsG0580028960.01.T01 AT3G09370 31.731 104 69 2 9 111 83 185 4.12e-11 63.2
MsG0580028960.01.T01 AT1G17950 40.196 102 60 1 9 110 5 105 5.89e-21 89.4
MsG0580028960.01.T01 AT5G40350 47.126 87 46 0 40 126 5 91 6.17e-21 87.0
MsG0580028960.01.T01 AT3G09370 41.176 102 59 1 9 110 143 243 7.90e-21 91.7
MsG0580028960.01.T01 AT3G09370 31.731 104 69 2 9 111 91 193 4.23e-11 63.2
MsG0580028960.01.T01 AT4G33450 32.886 149 83 3 1 139 1 142 8.68e-21 89.0
MsG0580028960.01.T01 AT3G27785 40.741 108 63 1 3 110 183 289 1.15e-20 90.9
MsG0580028960.01.T01 AT1G73410 42.056 107 53 2 9 111 6 107 1.30e-20 88.2
MsG0580028960.01.T01 AT1G73410 42.056 107 53 2 9 111 6 107 2.56e-20 86.7
MsG0580028960.01.T01 AT5G17800 35.897 117 74 1 4 120 88 203 4.30e-20 88.2
MsG0580028960.01.T01 AT3G27810 34.868 152 87 3 40 180 4 154 6.64e-20 84.7
MsG0580028960.01.T01 AT4G32730 37.864 103 63 1 9 111 87 188 7.94e-20 89.4
MsG0580028960.01.T01 AT4G32730 37.864 103 63 1 9 111 87 188 7.94e-20 89.4
MsG0580028960.01.T01 AT4G32730 37.864 103 63 1 9 111 87 188 7.94e-20 89.4
MsG0580028960.01.T01 AT4G32730 37.864 103 63 1 9 111 87 188 7.94e-20 89.4
MsG0580028960.01.T01 AT4G32730 37.864 103 63 1 9 111 87 188 8.33e-20 89.0
MsG0580028960.01.T01 AT3G23250 41.667 120 59 3 53 170 1 111 1.22e-19 85.1
MsG0580028960.01.T01 AT1G18960 41.509 106 53 3 9 111 10 109 1.41e-19 86.7
MsG0580028960.01.T01 AT3G29020 38.532 109 64 2 4 111 60 166 2.04e-19 84.7
MsG0580028960.01.T01 AT3G29020 38.532 109 64 2 4 111 62 168 2.34e-19 85.9
MsG0580028960.01.T01 AT5G58850 37.838 111 68 1 9 119 105 214 3.32e-19 86.7
MsG0580028960.01.T01 AT1G22640 53.226 62 29 0 53 114 1 62 5.13e-19 82.8
MsG0580028960.01.T01 AT5G40360 40.777 103 60 1 7 109 156 257 7.33e-19 85.1
MsG0580028960.01.T01 AT5G11050 32.168 143 93 2 5 147 101 239 1.37e-18 85.1
MsG0580028960.01.T01 AT5G39700 38.596 114 68 2 2 115 49 160 2.48e-17 78.2
MsG0580028960.01.T01 AT2G25230 38.318 107 65 1 3 109 20 125 8.72e-17 77.4
MsG0580028960.01.T01 AT4G00540 37.037 108 64 2 7 111 101 207 5.00e-16 77.4
MsG0580028960.01.T01 AT4G00540 37.037 108 64 2 7 111 99 205 7.10e-16 77.0
MsG0580028960.01.T01 AT5G40430 37.383 107 65 2 3 109 48 152 1.73e-15 74.3
MsG0580028960.01.T01 AT2G02820 34.653 101 65 1 11 111 32 131 1.94e-13 69.3
MsG0580028960.01.T01 AT2G02820 34.653 101 65 1 11 111 32 131 2.11e-13 69.7
MsG0580028960.01.T01 AT2G02820 34.653 101 65 1 11 111 32 131 2.41e-13 69.7
MsG0580028960.01.T01 AT1G14350 33.663 101 66 1 11 111 27 126 1.17e-12 67.8
MsG0580028960.01.T01 AT1G14350 33.663 101 66 1 11 111 27 126 1.17e-12 67.8
MsG0580028960.01.T01 AT1G74650 57.447 47 20 0 72 118 1 47 1.09e-11 63.5
MsG0580028960.01.T01 AT4G25560 27.979 193 123 5 66 255 3 182 4.88e-11 61.2
MsG0580028960.01.T01 AT5G59780 59.091 44 18 0 72 115 8 51 8.57e-11 59.7

Find 51 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTGTGCATCACCAATATT+TGG 0.157018 5:+89619971 None:intergenic
CTTTATCAACTCATTCAATA+TGG 0.292408 5:-89620096 MsG0580028960.01.T01:CDS
GATTGGGATTTCAATTCCTT+TGG 0.296288 5:-89619773 MsG0580028960.01.T01:CDS
TTTAAGGCTACACAAACTTC+TGG 0.299978 5:-89620712 MsG0580028960.01.T01:CDS
ACAAGTATGGTGAAGGAAAA+TGG 0.332221 5:-89621018 MsG0580028960.01.T01:CDS
TTGATTGCTGCAAGGCTTCC+GGG 0.348445 5:-89620268 MsG0580028960.01.T01:CDS
CCAATGATGTGAAGAATTAC+TGG 0.351522 5:-89620237 MsG0580028960.01.T01:CDS
GAAAGAAGTAATGAGAAAAT+TGG 0.354552 5:-89619887 MsG0580028960.01.T01:CDS
ATTGGGATTTCAATTCCTTT+GGG 0.360516 5:-89619772 MsG0580028960.01.T01:CDS
ATTGATTGCTGCAAGGCTTC+CGG 0.362167 5:-89620269 MsG0580028960.01.T01:CDS
CCAGTAATTCTTCACATCAT+TGG 0.377602 5:+89620237 None:intergenic
AAGACTATACTCCCAAATAT+TGG 0.386984 5:-89619983 MsG0580028960.01.T01:CDS
AAGGCTTGTATTAACAAGTA+TGG 0.389039 5:-89621031 MsG0580028960.01.T01:CDS
TACACAAACTTCTGGGGAAC+AGG 0.401830 5:-89620704 MsG0580028960.01.T01:intron
TTAAGGCTACACAAACTTCT+GGG 0.421350 5:-89620711 MsG0580028960.01.T01:CDS
ATAGTCTTGTCACACTCTCT+TGG 0.461855 5:+89619998 None:intergenic
TACGCTCAGTGATTCCGATT+GGG 0.463622 5:-89619789 MsG0580028960.01.T01:CDS
GTTGTGCATCACCAATATTT+GGG 0.464776 5:+89619972 None:intergenic
GTTGATAAAGTTCGAGGTCG+AGG 0.499120 5:+89620109 None:intergenic
CTAGTGACTTCAAGTGAAGA+TGG 0.499706 5:-89620028 MsG0580028960.01.T01:CDS
GAATGAGTTGATAAAGTTCG+AGG 0.512224 5:+89620103 None:intergenic
CTCTTGCTCTTTATTACAAG+AGG 0.514599 5:-89619864 MsG0580028960.01.T01:CDS
CTACGCTCAGTGATTCCGAT+TGG 0.522116 5:-89619790 MsG0580028960.01.T01:CDS
CATTTAGTTCCTAAAAGAGC+AGG 0.524795 5:-89620995 MsG0580028960.01.T01:intron
AAGACCAGAGGCGTGAGAAA+AGG 0.526806 5:-89621085 MsG0580028960.01.T01:CDS
AAAAGGTGCATGGACATATG+AGG 0.529512 5:-89621068 MsG0580028960.01.T01:CDS
TCCCACCACATAGTAGAAAG+TGG 0.533859 5:+89619932 None:intergenic
ACATCATTGGCTGTTCTACC+CGG 0.538561 5:+89620250 None:intergenic
ATCTCCCACTTTCTACTATG+TGG 0.539694 5:-89619937 MsG0580028960.01.T01:CDS
GCCGGAAAAGTTGTAGATTG+AGG 0.555853 5:-89620800 MsG0580028960.01.T01:CDS
AAAGGAATTGAAATCCCAAT+CGG 0.557492 5:+89619775 None:intergenic
TCCCACTTTCTACTATGTGG+TGG 0.561350 5:-89619934 MsG0580028960.01.T01:CDS
TGTATTAACAAGTATGGTGA+AGG 0.564505 5:-89621025 MsG0580028960.01.T01:CDS
TTGGGATTTCAATTCCTTTG+GGG 0.564675 5:-89619771 MsG0580028960.01.T01:CDS
CCCACTTTCTACTATGTGGT+GGG 0.579986 5:-89619933 MsG0580028960.01.T01:CDS
ATGCAGGTTTGAATAGATGC+CGG 0.589011 5:-89620818 MsG0580028960.01.T01:intron
TAAGGCTACACAAACTTCTG+GGG 0.606183 5:-89620710 MsG0580028960.01.T01:CDS
ACAAGAGGAGAATTTCACTT+CGG 0.607690 5:-89619849 MsG0580028960.01.T01:CDS
TGAGGAGGACAATCTACTCA+AGG 0.611389 5:-89621050 MsG0580028960.01.T01:CDS
GTGGGAGAGTTTGTTAAACG+TGG 0.613607 5:-89619915 MsG0580028960.01.T01:CDS
GAGGCGTGAGAAAAGGTGCA+TGG 0.616816 5:-89621078 MsG0580028960.01.T01:CDS
GAAAAGTTGTAGATTGAGGT+GGG 0.628302 5:-89620796 MsG0580028960.01.T01:CDS
CCCACCACATAGTAGAAAGT+GGG 0.628761 5:+89619933 None:intergenic
GATGGTCATTGATTGCTGCA+AGG 0.644969 5:-89620276 MsG0580028960.01.T01:CDS
CAATCGGAATCACTGAGCGT+AGG 0.649608 5:+89619791 None:intergenic
GGAAAAGTTGTAGATTGAGG+TGG 0.655059 5:-89620797 MsG0580028960.01.T01:CDS
AGGTGCATGGACATATGAGG+AGG 0.682411 5:-89621065 MsG0580028960.01.T01:CDS
GGTGATGCACAACCATGTGT+TGG 0.693947 5:-89619962 MsG0580028960.01.T01:CDS
CAATTAATTAAAGACCCCAA+AGG 0.695228 5:+89619757 None:intergenic
GTGCATATGGAAAAGACCAG+AGG 0.707799 5:-89621097 None:intergenic
AGTGGGAGATTACCAACACA+TGG 0.709814 5:+89619950 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATAATAAATGTATAGA+TGG - Chr5:89620557-89620576 MsG0580028960.01.T01:intron 10.0%
!! AGATGAAATATACTATAAAT+TGG + Chr5:89620524-89620543 None:intergenic 15.0%
!! ATATATGTTAAAAAAAGTCT+CGG - Chr5:89620418-89620437 MsG0580028960.01.T01:intron 15.0%
!! ATTTATTAAACTATATATGC+AGG - Chr5:89620017-89620036 MsG0580028960.01.T01:CDS 15.0%
!! CACAAATATATATTAAACTA+AGG + Chr5:89620498-89620517 None:intergenic 15.0%
!!! AATTGTTATTTGTACATATT+AGG - Chr5:89620196-89620215 MsG0580028960.01.T01:CDS 15.0%
!!! ATATTTAGAATATATAAGCA+TGG + Chr5:89619976-89619995 None:intergenic 15.0%
!!! ATGAAATTGATATGATTTTA+AGG - Chr5:89620123-89620142 MsG0580028960.01.T01:CDS 15.0%
!!! ATTGTTATTTGTACATATTA+GGG - Chr5:89620197-89620216 MsG0580028960.01.T01:CDS 15.0%
!!! TCTTCATTTTCTTCTTTTTT+TGG + Chr5:89620667-89620686 None:intergenic 20.0%
!!! TTGTTATTTGTACATATTAG+GGG - Chr5:89620198-89620217 MsG0580028960.01.T01:CDS 20.0%
! CTACTAGATCTAAATTAACA+AGG + Chr5:89620228-89620247 None:intergenic 25.0%
! CTTTATCAACTCATTCAATA+TGG - Chr5:89620755-89620774 MsG0580028960.01.T01:CDS 25.0%
! GAAAGAAGTAATGAGAAAAT+TGG - Chr5:89620964-89620983 MsG0580028960.01.T01:intron 25.0%
!!! GTGGAGGAATTTTTTAATAA+TGG - Chr5:89621036-89621055 MsG0580028960.01.T01:CDS 25.0%
AAAGGAATTGAAATCCCAAT+CGG + Chr5:89621079-89621098 None:intergenic 30.0%
AAGACTATACTCCCAAATAT+TGG - Chr5:89620868-89620887 MsG0580028960.01.T01:intron 30.0%
AAGGCTTGTATTAACAAGTA+TGG - Chr5:89619820-89619839 MsG0580028960.01.T01:CDS 30.0%
ATTGGGATTTCAATTCCTTT+GGG - Chr5:89621079-89621098 MsG0580028960.01.T01:CDS 30.0%
TGTATTAACAAGTATGGTGA+AGG - Chr5:89619826-89619845 MsG0580028960.01.T01:CDS 30.0%
!! AAAGTTTCTCTTTTGATTGC+GGG + Chr5:89620095-89620114 None:intergenic 30.0%
!! ATTTTTCTATACGCACTGAT+TGG + Chr5:89620400-89620419 None:intergenic 30.0%
!! GAAAGTTTCTCTTTTGATTG+CGG + Chr5:89620096-89620115 None:intergenic 30.0%
!!! TTTTTCTATACGCACTGATT+GGG + Chr5:89620399-89620418 None:intergenic 30.0%
ACAAGAGGAGAATTTCACTT+CGG - Chr5:89621002-89621021 MsG0580028960.01.T01:CDS 35.0%
ACAAGTATGGTGAAGGAAAA+TGG - Chr5:89619833-89619852 MsG0580028960.01.T01:CDS 35.0%
CCAATGATGTGAAGAATTAC+TGG - Chr5:89620614-89620633 MsG0580028960.01.T01:intron 35.0%
CCAGTAATTCTTCACATCAT+TGG + Chr5:89620617-89620636 None:intergenic 35.0%
CTCCACATGTAATTGTAGAT+CGG + Chr5:89620448-89620467 None:intergenic 35.0%
CTCTTGCTCTTTATTACAAG+AGG - Chr5:89620987-89621006 MsG0580028960.01.T01:intron 35.0%
GAAAAGTTGTAGATTGAGGT+GGG - Chr5:89620055-89620074 MsG0580028960.01.T01:CDS 35.0%
GATTGGGATTTCAATTCCTT+TGG - Chr5:89621078-89621097 MsG0580028960.01.T01:CDS 35.0%
GTTGTGCATCACCAATATTT+GGG + Chr5:89620882-89620901 None:intergenic 35.0%
TATGCTTCCAAATACCAACA+CGG - Chr5:89620318-89620337 MsG0580028960.01.T01:intron 35.0%
TTAAGGCTACACAAACTTCT+GGG - Chr5:89620140-89620159 MsG0580028960.01.T01:CDS 35.0%
TTGGGATTTCAATTCCTTTG+GGG - Chr5:89621080-89621099 MsG0580028960.01.T01:CDS 35.0%
! ACCTCAATCTACAACTTTTC+CGG + Chr5:89620055-89620074 None:intergenic 35.0%
! ATACAAGTACCTGCTCTTTT+AGG + Chr5:89619868-89619887 None:intergenic 35.0%
! CATTTAGTTCCTAAAAGAGC+AGG - Chr5:89619856-89619875 MsG0580028960.01.T01:CDS 35.0%
! TTTAAGGCTACACAAACTTC+TGG - Chr5:89620139-89620158 MsG0580028960.01.T01:CDS 35.0%
!! AAGTTTCTCTTTTGATTGCG+GGG + Chr5:89620094-89620113 None:intergenic 35.0%
!! GAATGAGTTGATAAAGTTCG+AGG + Chr5:89620751-89620770 None:intergenic 35.0%
!!! TTTTCTATACGCACTGATTG+GGG + Chr5:89620398-89620417 None:intergenic 35.0%
ATCTCCCACTTTCTACTATG+TGG - Chr5:89620914-89620933 MsG0580028960.01.T01:intron 40.0%
ATGCAGGTTTGAATAGATGC+CGG - Chr5:89620033-89620052 MsG0580028960.01.T01:CDS 40.0%
CTAGTGACTTCAAGTGAAGA+TGG - Chr5:89620823-89620842 MsG0580028960.01.T01:intron 40.0%
GACCGATCTACAATTACATG+TGG - Chr5:89620443-89620462 MsG0580028960.01.T01:intron 40.0%
GGAAAAGTTGTAGATTGAGG+TGG - Chr5:89620054-89620073 MsG0580028960.01.T01:CDS 40.0%
GGTTGTGCATCACCAATATT+TGG + Chr5:89620883-89620902 None:intergenic 40.0%
TAAGGCTACACAAACTTCTG+GGG - Chr5:89620141-89620160 MsG0580028960.01.T01:CDS 40.0%
! AAAAGGTGCATGGACATATG+AGG - Chr5:89619783-89619802 MsG0580028960.01.T01:CDS 40.0%
! AACTGCTTCTAGCTATAGCT+AGG + Chr5:89619934-89619953 None:intergenic 40.0%
! CACTTCGGAGTTTTCAAATG+TGG - Chr5:89621017-89621036 MsG0580028960.01.T01:CDS 40.0%
! TTCGGAGTTTTCAAATGTGG+AGG - Chr5:89621020-89621039 MsG0580028960.01.T01:CDS 40.0%
!! ATAGTCTTGTCACACTCTCT+TGG + Chr5:89620856-89620875 None:intergenic 40.0%
AGTGGGAGATTACCAACACA+TGG + Chr5:89620904-89620923 None:intergenic 45.0%
ATTGATTGCTGCAAGGCTTC+CGG - Chr5:89620582-89620601 MsG0580028960.01.T01:intron 45.0%
CCCACCACATAGTAGAAAGT+GGG + Chr5:89620921-89620940 None:intergenic 45.0%
CCCACTTTCTACTATGTGGT+GGG - Chr5:89620918-89620937 MsG0580028960.01.T01:intron 45.0%
GCCGGAAAAGTTGTAGATTG+AGG - Chr5:89620051-89620070 MsG0580028960.01.T01:CDS 45.0%
TACGCTCAGTGATTCCGATT+GGG - Chr5:89621062-89621081 MsG0580028960.01.T01:CDS 45.0%
TCCCACCACATAGTAGAAAG+TGG + Chr5:89620922-89620941 None:intergenic 45.0%
TCCCACTTTCTACTATGTGG+TGG - Chr5:89620917-89620936 MsG0580028960.01.T01:intron 45.0%
TGAGGAGGACAATCTACTCA+AGG - Chr5:89619801-89619820 MsG0580028960.01.T01:CDS 45.0%
TTCCAAATACCAACACGGTG+TGG - Chr5:89620323-89620342 MsG0580028960.01.T01:intron 45.0%
! ACATCATTGGCTGTTCTACC+CGG + Chr5:89620604-89620623 None:intergenic 45.0%
! GATGGTCATTGATTGCTGCA+AGG - Chr5:89620575-89620594 MsG0580028960.01.T01:intron 45.0%
! GTTGATAAAGTTCGAGGTCG+AGG + Chr5:89620745-89620764 None:intergenic 45.0%
! TACACAAACTTCTGGGGAAC+AGG - Chr5:89620147-89620166 MsG0580028960.01.T01:CDS 45.0%
!! GTGGGAGAGTTTGTTAAACG+TGG - Chr5:89620936-89620955 MsG0580028960.01.T01:intron 45.0%
AGGTGCATGGACATATGAGG+AGG - Chr5:89619786-89619805 MsG0580028960.01.T01:CDS 50.0%
CAATCGGAATCACTGAGCGT+AGG + Chr5:89621063-89621082 None:intergenic 50.0%
CCAACACGGTGTGGTGTAAA+CGG - Chr5:89620332-89620351 MsG0580028960.01.T01:intron 50.0%
CTACGCTCAGTGATTCCGAT+TGG - Chr5:89621061-89621080 MsG0580028960.01.T01:CDS 50.0%
GGTGATGCACAACCATGTGT+TGG - Chr5:89620889-89620908 MsG0580028960.01.T01:intron 50.0%
TTGATTGCTGCAAGGCTTCC+GGG - Chr5:89620583-89620602 MsG0580028960.01.T01:intron 50.0%
! AAGACCAGAGGCGTGAGAAA+AGG - Chr5:89619766-89619785 MsG0580028960.01.T01:CDS 50.0%
! CACCACACCGTGTTGGTATT+TGG + Chr5:89620328-89620347 None:intergenic 50.0%
CCGTTTACACCACACCGTGT+TGG + Chr5:89620335-89620354 None:intergenic 55.0%
! GAGGCGTGAGAAAAGGTGCA+TGG - Chr5:89619773-89619792 MsG0580028960.01.T01:CDS 55.0%
! TGCACCTTTTCTCACGCCTC+TGG + Chr5:89619773-89619792 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 89619760 89621113 89619760 ID=MsG0580028960.01;Name=MsG0580028960.01
Chr5 mRNA 89619760 89621113 89619760 ID=MsG0580028960.01.T01;Parent=MsG0580028960.01;Name=MsG0580028960.01.T01;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|1|1|3|0|261
Chr5 exon 89620996 89621113 89620996 ID=MsG0580028960.01.T01:exon:26014;Parent=MsG0580028960.01.T01
Chr5 exon 89620705 89620834 89620705 ID=MsG0580028960.01.T01:exon:26013;Parent=MsG0580028960.01.T01
Chr5 exon 89619760 89620297 89619760 ID=MsG0580028960.01.T01:exon:26012;Parent=MsG0580028960.01.T01
Chr5 CDS 89620996 89621113 89620996 ID=MsG0580028960.01.T01:cds;Parent=MsG0580028960.01.T01
Chr5 CDS 89620705 89620834 89620705 ID=MsG0580028960.01.T01:cds;Parent=MsG0580028960.01.T01
Chr5 CDS 89619760 89620297 89619760 ID=MsG0580028960.01.T01:cds;Parent=MsG0580028960.01.T01
Gene Sequence

>MsG0580028960.01.T01

ATGGAAAAGACCAGAGGCGTGAGAAAAGGTGCATGGACATATGAGGAGGACAATCTACTCAAGGCTTGTATTAACAAGTATGGTGAAGGAAAATGGCATTTAGTTCCTAAAAGAGCAGGTTTGAATAGATGCCGGAAAAGTTGTAGATTGAGGTGGGTGAATTATTTAAACCCCGCAATCAAAAGAGAAACTTTCTCTCATGATGAAATTGATATGATTTTAAGGCTACACAAACTTCTGGGGAACAGATGGTCATTGATTGCTGCAAGGCTTCCGGGTAGAACAGCCAATGATGTGAAGAATTACTGGCACACAAATTTGCGCAAGAAAGTGATTCCAAAAAAAGAAGAAAATGAAGAAAAAGAGAAATCTAAAGAAAGCATGATAAAAATCAAATCTCATGAAATTATCAAGCCTCGACCTCGAACTTTATCAACTCATTCAATATGGTTGAAGAAGAAACATAATTTAGTGAGTAATGCTAGTGCAGCAAAACTAGTGACTTCAAGTGAAGATGGCAATGTTCCAAGAGAGTGTGACAAGACTATACTCCCAAATATTGGTGATGCACAACCATGTGTTGGTAATCTCCCACTTTCTACTATGTGGTGGGAGAGTTTGTTAAACGTGGATGAAGAAAGAAGTAATGAGAAAATTGGCTCTTGCTCTTTATTACAAGAGGAGAATTTCACTTCGGAGTTTTCAAATGTGGAGGAATTTTTTAATAATGGTCCTACGCTCAGTGATTCCGATTGGGATTTCAATTCCTTTGGGGTCTTTAATTAA

Protein sequence

>MsG0580028960.01.T01

MEKTRGVRKGAWTYEEDNLLKACINKYGEGKWHLVPKRAGLNRCRKSCRLRWVNYLNPAIKRETFSHDEIDMILRLHKLLGNRWSLIAARLPGRTANDVKNYWHTNLRKKVIPKKEENEEKEKSKESMIKIKSHEIIKPRPRTLSTHSIWLKKKHNLVSNASAAKLVTSSEDGNVPRECDKTILPNIGDAQPCVGNLPLSTMWWESLLNVDEERSNEKIGSCSLLQEENFTSEFSNVEEFFNNGPTLSDSDWDFNSFGVFN*