AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029035.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029035.01.T01 MTR_5g080580 95.000 260 10 2 1 258 1 259 1.52e-142 409
MsG0580029035.01.T01 MTR_3g068035 77.083 144 33 0 97 240 89 232 2.86e-63 206
MsG0580029035.01.T01 MTR_1g044155 71.333 150 43 0 87 236 126 275 5.27e-58 194
MsG0580029035.01.T01 MTR_1g073860 58.586 198 68 1 87 284 94 277 1.45e-57 191
MsG0580029035.01.T01 MTR_1g079810 62.733 161 60 0 81 241 68 228 4.21e-55 184
MsG0580029035.01.T01 MTR_5g011520 57.292 192 80 1 49 240 64 253 6.64e-52 177
MsG0580029035.01.T01 MTR_8g036060 67.097 155 51 0 86 240 85 239 7.77e-51 173
MsG0580029035.01.T01 MTR_5g091630 58.442 154 64 0 87 240 47 200 7.06e-50 169
MsG0580029035.01.T01 MTR_7g080980 59.740 154 59 1 96 249 66 216 1.34e-47 164
MsG0580029035.01.T01 MTR_4g098450 64.430 149 53 0 92 240 81 229 4.05e-47 163
MsG0580029035.01.T01 MTR_3g100470 42.233 206 96 3 42 243 48 234 1.90e-44 156
MsG0580029035.01.T01 MTR_5g066020 45.752 153 78 3 96 243 60 212 6.08e-35 130
MsG0580029035.01.T01 MTR_5g089600 34.973 183 105 4 63 234 56 235 1.39e-27 109
MsG0580029035.01.T01 MTR_1g032910 32.934 167 100 3 80 234 94 260 1.02e-21 94.7
MsG0580029035.01.T01 MTR_5g089700 32.278 158 98 2 83 231 71 228 6.78e-21 91.3
MsG0580029035.01.T01 MTR_4g057487 30.726 179 98 6 85 242 15 188 5.11e-18 83.2
MsG0580029035.01.T01 MTR_6g061670 41.880 117 55 2 118 226 134 245 4.08e-17 82.0
MsG0580029035.01.T01 MTR_6g061670 41.880 117 55 2 118 226 129 240 4.79e-17 81.6
MsG0580029035.01.T01 MTR_5g089090 32.911 158 90 2 87 233 28 180 5.70e-17 79.3
MsG0580029035.01.T01 MTR_5g010330 32.597 181 109 5 78 246 95 274 1.06e-16 80.9
MsG0580029035.01.T01 MTR_4g057525 29.268 164 106 3 81 234 30 193 1.08e-16 79.3
MsG0580029035.01.T01 MTR_1g073870 34.404 218 80 6 80 281 45 215 2.21e-16 78.2
MsG0580029035.01.T01 MTR_1g053685 28.049 164 109 2 80 234 78 241 2.68e-16 79.0
MsG0580029035.01.T01 MTR_1g061530 37.903 124 73 2 118 237 145 268 2.42e-15 77.4
MsG0580029035.01.T01 MTR_1g076710 42.241 116 63 2 114 226 134 248 1.03e-14 75.1
MsG0580029035.01.T01 MTR_4g069110 37.113 97 61 0 85 181 32 128 1.32e-14 72.0
MsG0580029035.01.T01 MTR_8g078930 30.612 147 86 4 114 245 1 146 4.80e-13 67.0
MsG0580029035.01.T01 MTR_7g077120 30.682 176 113 3 79 248 119 291 5.05e-13 70.1
MsG0580029035.01.T01 MTR_8g036160 37.984 129 76 1 118 242 146 274 1.24e-12 68.9
MsG0580029035.01.T01 MTR_1g079780 36.937 111 69 1 118 227 113 223 1.95e-12 68.2
MsG0580029035.01.T01 MTR_8g031100 34.320 169 97 3 87 245 125 289 3.47e-12 67.4
MsG0580029035.01.T01 MTR_8g098390 33.566 143 91 3 113 252 165 306 6.16e-12 67.0
MsG0580029035.01.T01 MTR_4g055813 33.594 128 83 2 113 238 18 145 4.31e-11 63.5
MsG0580029035.01.T01 MTR_7g074935 37.795 127 69 2 118 241 131 250 5.58e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029035.01.T01 AT4G14465 68.387 155 49 0 87 241 67 221 9.12e-60 196
MsG0580029035.01.T01 AT2G35270 56.684 187 72 2 87 273 78 255 4.87e-56 186
MsG0580029035.01.T01 AT1G76500 55.191 183 70 3 68 238 50 232 4.13e-53 179
MsG0580029035.01.T01 AT2G42940 53.293 167 78 0 86 252 52 218 6.80e-50 169
MsG0580029035.01.T01 AT2G45430 61.404 171 62 2 87 253 89 259 2.64e-48 167
MsG0580029035.01.T01 AT3G04570 59.494 158 56 1 87 236 80 237 2.94e-48 167
MsG0580029035.01.T01 AT4G17800 61.379 145 56 0 96 240 91 235 4.61e-47 163
MsG0580029035.01.T01 AT3G60870 57.792 154 62 2 78 231 51 201 4.76e-47 162
MsG0580029035.01.T01 AT4G22810 63.057 157 55 1 87 240 105 261 1.02e-46 163
MsG0580029035.01.T01 AT5G49700 49.708 171 79 2 80 243 49 219 1.87e-46 161
MsG0580029035.01.T01 AT3G55560 67.808 146 46 1 92 236 93 238 4.30e-44 155
MsG0580029035.01.T01 AT4G35390 67.333 150 47 1 87 234 63 212 3.49e-43 153
MsG0580029035.01.T01 AT4G12050 56.216 185 62 3 87 270 118 284 1.91e-40 147
MsG0580029035.01.T01 AT1G20900 60.625 160 54 1 86 236 85 244 2.16e-38 140
MsG0580029035.01.T01 AT1G14490 44.379 169 85 3 88 249 6 172 3.87e-32 121
MsG0580029035.01.T01 AT1G14490 44.379 169 85 3 88 249 25 191 1.03e-31 120
MsG0580029035.01.T01 AT4G17950 39.623 159 89 3 73 226 182 338 1.41e-18 87.8
MsG0580029035.01.T01 AT2G33620 35.593 177 100 5 86 259 136 301 1.50e-16 80.9
MsG0580029035.01.T01 AT2G33620 35.593 177 100 5 86 259 136 301 1.50e-16 80.9
MsG0580029035.01.T01 AT2G33620 35.593 177 100 5 86 259 136 301 1.50e-16 80.9
MsG0580029035.01.T01 AT2G33620 35.593 177 100 5 86 259 136 301 1.50e-16 80.9
MsG0580029035.01.T01 AT5G62260 37.815 119 71 1 119 234 165 283 1.65e-16 79.7
MsG0580029035.01.T01 AT4G12080 36.296 135 77 2 118 249 174 302 2.17e-16 80.5
MsG0580029035.01.T01 AT5G51590 39.286 112 65 1 118 226 182 293 1.07e-15 79.0
MsG0580029035.01.T01 AT2G45850 32.759 174 110 4 85 252 130 302 1.13e-15 78.2
MsG0580029035.01.T01 AT2G45850 32.759 174 110 4 85 252 130 302 1.13e-15 78.2
MsG0580029035.01.T01 AT5G62260 39.640 111 64 1 119 226 165 275 1.60e-15 78.2
MsG0580029035.01.T01 AT5G62260 39.640 111 64 1 119 226 165 275 1.60e-15 78.2
MsG0580029035.01.T01 AT4G25320 38.095 126 74 2 118 239 170 295 1.69e-15 78.2
MsG0580029035.01.T01 AT1G63470 37.838 148 81 4 87 226 147 291 6.99e-15 76.3
MsG0580029035.01.T01 AT3G04590 36.697 109 69 0 118 226 175 283 1.07e-14 74.7
MsG0580029035.01.T01 AT3G04590 36.697 109 69 0 118 226 175 283 1.99e-14 75.1
MsG0580029035.01.T01 AT2G45850 34.899 149 91 3 85 227 130 278 1.26e-12 68.2
MsG0580029035.01.T01 AT4G00200 39.831 118 68 1 118 232 127 244 9.73e-11 63.2
MsG0580029035.01.T01 AT4G00200 39.831 118 68 1 118 232 127 244 9.73e-11 63.2

Find 131 sgRNAs with CRISPR-Local

Find 341 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGATCATCAACGGCGGTTT+TGG 0.221724 5:+90708495 None:intergenic
CAGGTTGTGGTGGTATTATT+AGG 0.251118 5:-90704869 MsG0580029035.01.T01:CDS
CGCTCTTAGCAGTGTTATCT+TGG 0.275180 5:-90708457 MsG0580029035.01.T01:CDS
GTGCTTATATGGATGAGTTT+TGG 0.282008 5:-90704794 MsG0580029035.01.T01:CDS
CATTTCCATTTGAATCATAC+TGG 0.306725 5:+90707873 None:intergenic
CAGTGTGTGTAGTGCTTATA+TGG 0.307821 5:-90704805 MsG0580029035.01.T01:CDS
GGACTGACTGTTTATCTTGC+TGG 0.311606 5:-90708219 MsG0580029035.01.T01:CDS
AGGTTGTGGTGGTATTATTA+GGG 0.321060 5:-90704868 MsG0580029035.01.T01:CDS
GAGAAAATTCGTCGTATGAT+AGG 0.323755 5:-90704645 MsG0580029035.01.T01:CDS
AACGTGGCCGTTACTGTTCC+CGG 0.337945 5:+90708614 None:intergenic
GTTGTTGGAGGACTGGTTAT+CGG 0.338892 5:-90708183 MsG0580029035.01.T01:CDS
ATAATGCTCTTATTCGTAAT+GGG 0.339249 5:-90704692 MsG0580029035.01.T01:CDS
GTTACTGTTCCCGGTGTTGC+TGG 0.359889 5:+90708623 None:intergenic
ACGTGGCCGGCGTCCACTTC+TGG 0.362876 5:+90708545 None:intergenic
GGAGGTCAAGGGCAGGTTGT+TGG 0.364232 5:-90708198 MsG0580029035.01.T01:CDS
GGTGGTGGTGGTGGCGGCGG+TGG 0.372687 5:-90707932 MsG0580029035.01.T01:CDS
CCTTCGCCGCCTGATGCTAC+TGG 0.374745 5:-90708240 MsG0580029035.01.T01:CDS
ATCGGGTCGTTGATTGCGTC+CGG 0.384365 5:-90708165 MsG0580029035.01.T01:CDS
GCAAGTAACGGTAGCGTTAA+CGG 0.398295 5:-90708687 MsG0580029035.01.T01:CDS
TGATCCGGGTTGGACCGTTT+CGG 0.403175 5:+90708733 None:intergenic
GAGAACAGCAATGGCCGTTC+CGG 0.405248 5:-90708579 MsG0580029035.01.T01:CDS
AGCAGTGGAAGTGGTGGTGG+TGG 0.415479 5:-90707944 MsG0580029035.01.T01:CDS
GGTGCAACTTCTCATGGATT+AGG 0.420964 5:-90707911 MsG0580029035.01.T01:CDS
AGCGTTAACGGCAACGTTAC+CGG 0.422468 5:-90708675 MsG0580029035.01.T01:CDS
TTAATCCAGTATGATTCAAA+TGG 0.426325 5:-90707878 MsG0580029035.01.T01:CDS
AGTGGAAGTGGTGGTGGTGG+TGG 0.426405 5:-90707941 MsG0580029035.01.T01:CDS
CGGCCACGTGGACGTCCGCC+GGG 0.427147 5:-90708531 MsG0580029035.01.T01:CDS
GTCAGCAGTGGAAGTGGTGG+TGG 0.431012 5:-90707947 MsG0580029035.01.T01:intron
GGCGTCCACTTCTGGCGGTC+TGG 0.431397 5:+90708553 None:intergenic
ATAACACTGCTAAGAGCGTT+TGG 0.433316 5:+90708462 None:intergenic
CGTAATGGGAAAGGTTCCTA+TGG 0.438365 5:-90704678 MsG0580029035.01.T01:CDS
CCCGGCGATGTCGGCTCCGT+TGG 0.441184 5:+90708428 None:intergenic
TTGACTAAAGCATTTGCAAA+TGG 0.443007 5:+90704575 None:intergenic
GATAATGCTCTTATTCGTAA+TGG 0.443498 5:-90704693 MsG0580029035.01.T01:CDS
TACTTATGAGAGGTTGCCTT+TGG 0.443630 5:-90708106 MsG0580029035.01.T01:CDS
GTTTATCTTGCTGGAGGTCA+AGG 0.444262 5:-90708210 MsG0580029035.01.T01:CDS
CAGTATGATTCAAATGGAAA+TGG 0.446397 5:-90707872 MsG0580029035.01.T01:intron
CCGGCCACGTGGACGTCCGC+CGG 0.447701 5:-90708532 MsG0580029035.01.T01:CDS
GGGGAGTGCACGAAAGTTTG+AGG 0.459930 5:-90704773 MsG0580029035.01.T01:CDS
TTTGGCTTGTTCTTCGACCC+CGG 0.460405 5:+90708513 None:intergenic
ACTTCTGGCGGTCTGGTCGC+CGG 0.466156 5:+90708560 None:intergenic
TTTCGGTTCTCTCCTTCGAC+CGG 0.467968 5:+90708750 None:intergenic
ACTCTCTTCGTAAAATGATC+CGG 0.471546 5:+90708718 None:intergenic
GTCGTTGATTGCGTCCGGGC+CGG 0.473627 5:-90708160 MsG0580029035.01.T01:CDS
TACTCATAGCATGGTCCCAT+TGG 0.477201 5:+90708018 None:intergenic
CCGGCGGACGTCCACGTGGC+CGG 0.477287 5:+90708532 None:intergenic
TTGTTGGAGGACTGGTTATC+GGG 0.477923 5:-90708182 MsG0580029035.01.T01:CDS
CCAACGGAGCCGACATCGCC+GGG 0.480712 5:-90708428 MsG0580029035.01.T01:CDS
TTGCTGGTGTTACTCCTCGT+TGG 0.484154 5:+90708639 None:intergenic
GCATCAGGCGGCGAAGGCGG+AGG 0.491659 5:+90708246 None:intergenic
AGGGCAGGTTGTTGGAGGAC+TGG 0.492558 5:-90708190 MsG0580029035.01.T01:CDS
TTTCTGGTCAGCAGTGGAAG+TGG 0.494401 5:-90707953 MsG0580029035.01.T01:intron
CCAGTAGCATCAGGCGGCGA+AGG 0.498646 5:+90708240 None:intergenic
GCCAACGGAGCCGACATCGC+CGG 0.501920 5:-90708429 MsG0580029035.01.T01:CDS
GATTGCGTCCGGGCCGGTGA+TGG 0.502036 5:-90708154 MsG0580029035.01.T01:CDS
GGAGGAATGATATCTCTTCA+AGG 0.504764 5:-90708306 MsG0580029035.01.T01:CDS
CTCCCGGAGCATTATGCTGC+CGG 0.507198 5:+90708325 None:intergenic
GGCGGTGGTGCAACTTCTCA+TGG 0.510286 5:-90707917 MsG0580029035.01.T01:CDS
GTTTCAGTTCTCAGCGGCAC+TGG 0.515266 5:-90708369 MsG0580029035.01.T01:CDS
CTCCGGCAGCATAATGCTCC+GGG 0.515629 5:-90708327 MsG0580029035.01.T01:CDS
ACAGTCAGTCCAGTAGCATC+AGG 0.516325 5:+90708231 None:intergenic
ACTCCGGCAGCATAATGCTC+CGG 0.516525 5:-90708328 MsG0580029035.01.T01:CDS
TTAGGGGCAGCGATAATGAA+TGG 0.520341 5:-90704851 MsG0580029035.01.T01:CDS
GGCGACCAGACCGCCAGAAG+TGG 0.526727 5:-90708558 MsG0580029035.01.T01:CDS
GGCAGCGATAATGAATGGCT+TGG 0.529921 5:-90704846 MsG0580029035.01.T01:CDS
CTCTCTTCGTAAAATGATCC+GGG 0.530341 5:+90708719 None:intergenic
TGCAACAACCATCACCGGCC+CGG 0.532946 5:+90708146 None:intergenic
AGGAGTAACACCAGCAACAC+CGG 0.533805 5:-90708633 MsG0580029035.01.T01:CDS
TCGGGTCGTTGATTGCGTCC+GGG 0.535319 5:-90708164 MsG0580029035.01.T01:CDS
GCTCTTATTCGTAATGGGAA+AGG 0.538524 5:-90704687 MsG0580029035.01.T01:CDS
CTGAAACACCACGGTGGCGA+CGG 0.544200 5:+90708385 None:intergenic
GGTCAAGGGCAGGTTGTTGG+AGG 0.544871 5:-90708195 MsG0580029035.01.T01:CDS
AAAGTTGAATGTGCATTCTC+TGG 0.545941 5:-90704721 MsG0580029035.01.T01:CDS
TCCTCATCTTCATCTTCCAA+AGG 0.547486 5:+90708090 None:intergenic
AGCAACACCGGGAACAGTAA+CGG 0.551857 5:-90708621 MsG0580029035.01.T01:CDS
TGGCGGTCTGGTCGCCGGAA+CGG 0.552913 5:+90708565 None:intergenic
TTCGGTTCTCTCCTTCGACC+GGG 0.553099 5:+90708751 None:intergenic
GCCTTTGGAAGATGAAGATG+AGG 0.560048 5:-90708091 MsG0580029035.01.T01:CDS
AAGACAAACTGAGGCGAACC+CGG 0.560818 5:-90708769 MsG0580029035.01.T01:CDS
TCTTGCTGGAGGTCAAGGGC+AGG 0.564735 5:-90708205 MsG0580029035.01.T01:CDS
TTTCTCAAAGACCTTCCCAT+AGG 0.574196 5:+90704662 None:intergenic
CTTCGTAAAATGATCCGGGT+TGG 0.575952 5:+90708723 None:intergenic
TTTATCTTGCTGGAGGTCAA+GGG 0.577042 5:-90708209 MsG0580029035.01.T01:CDS
AGCGTAGGATGAAATACTCC+CGG 0.580056 5:+90708410 None:intergenic
TGAAGAGATATCATTCCTCC+CGG 0.586723 5:+90708309 None:intergenic
TTGCTAATGCTACTTATGAG+AGG 0.586891 5:-90708116 MsG0580029035.01.T01:CDS
GGAGTAACACCAGCAACACC+GGG 0.587356 5:-90708632 MsG0580029035.01.T01:CDS
TCTCAAGTTCGTCGTTAACG+TGG 0.589314 5:+90708598 None:intergenic
ACTGAGGCGAACCCGGTCGA+AGG 0.590397 5:-90708762 MsG0580029035.01.T01:CDS
GTAGCATCAGGCGGCGAAGG+CGG 0.592606 5:+90708243 None:intergenic
TTAGAAACATGGCGAATCGA+TGG 0.594524 5:-90708800 None:intergenic
GTCGAAGGAGAGAACCGAAA+CGG 0.595335 5:-90708747 MsG0580029035.01.T01:CDS
GGCCACGTGGACGTCCGCCG+GGG 0.603257 5:-90708530 MsG0580029035.01.T01:CDS
GAGGAATGATATCTCTTCAA+GGG 0.603437 5:-90708305 MsG0580029035.01.T01:CDS
GAAACATGGCGAATCGATGG+TGG 0.606892 5:-90708797 None:intergenic
TGGGAAAGGTTCCTATGGGA+AGG 0.608039 5:-90704673 MsG0580029035.01.T01:CDS
CTGGTCAGCAGTGGAAGTGG+TGG 0.608127 5:-90707950 MsG0580029035.01.T01:intron
GATTACCATTACTCATAGCA+TGG 0.610465 5:+90708009 None:intergenic
GTAGCTGCAACAACCATCAC+CGG 0.612343 5:+90708141 None:intergenic
GAGTCACGAAGGGCAAGTAA+CGG 0.612420 5:-90708699 MsG0580029035.01.T01:CDS
TGAAATACTCCCGGCGATGT+CGG 0.614569 5:+90708419 None:intergenic
GTAATGGGAAAGGTTCCTAT+GGG 0.617435 5:-90704677 MsG0580029035.01.T01:CDS
ATGTTACCAACGTGACACTC+CGG 0.625468 5:-90708344 MsG0580029035.01.T01:CDS
CTGACTGTTTATCTTGCTGG+AGG 0.627135 5:-90708216 MsG0580029035.01.T01:CDS
CAATGAAGAGAATTTGCAAG+AGG 0.629194 5:-90708067 MsG0580029035.01.T01:CDS
TGGCCGGCGTCCACTTCTGG+CGG 0.635888 5:+90708548 None:intergenic
TACGCTAACCGTCGCCACCG+TGG 0.636989 5:-90708393 MsG0580029035.01.T01:CDS
AGAACCGAAACGGTCCAACC+CGG 0.637286 5:-90708737 MsG0580029035.01.T01:CDS
GTTGAATGTGCATTCTCTGG+TGG 0.639612 5:-90704718 MsG0580029035.01.T01:CDS
GACGAACTTGAGAACAGCAA+TGG 0.639657 5:-90708588 MsG0580029035.01.T01:CDS
GGTTGTGGTGGTATTATTAG+GGG 0.645856 5:-90704867 MsG0580029035.01.T01:CDS
GTTATCTTGGAAGTCGCCAA+CGG 0.649936 5:-90708444 MsG0580029035.01.T01:CDS
AGAAGTGGACGCCGGCCACG+TGG 0.651347 5:-90708543 MsG0580029035.01.T01:CDS
GTCAGTCCAGTAGCATCAGG+CGG 0.653737 5:+90708234 None:intergenic
CGTTGGAGTAACGTTACCGC+CGG 0.657869 5:+90708656 None:intergenic
AATGGTCGAGCAGGTTGTGG+TGG 0.665681 5:-90704879 MsG0580029035.01.T01:intron
ACGGTGGCGACGGTTAGCGT+AGG 0.673829 5:+90708395 None:intergenic
CGGCAGCATAATGCTCCGGG+AGG 0.678193 5:-90708324 MsG0580029035.01.T01:CDS
TTTACGAAGAGAGTCACGAA+GGG 0.679033 5:-90708709 MsG0580029035.01.T01:CDS
CGCTGAGAACTGAAACACCA+CGG 0.679470 5:+90708376 None:intergenic
AGACCGCCAGAAGTGGACGC+CGG 0.681821 5:-90708551 MsG0580029035.01.T01:CDS
GAATGATATCTCTTCAAGGG+AGG 0.682818 5:-90708302 MsG0580029035.01.T01:CDS
CGTGGTGTTTCAGTTCTCAG+CGG 0.694682 5:-90708375 MsG0580029035.01.T01:CDS
ATGCTGCCGGAGTGTCACGT+TGG 0.694944 5:+90708338 None:intergenic
GACCCCGGCGGACGTCCACG+TGG 0.701300 5:+90708528 None:intergenic
GGCTTGTTCTTCGACCCCGG+CGG 0.708792 5:+90708516 None:intergenic
TGTCACATTCTGTCACTCAG+CGG 0.712474 5:-90708279 MsG0580029035.01.T01:CDS
GTGGAACGAAAGACAAACTG+AGG 0.722076 5:-90708778 MsG0580029035.01.T01:CDS
TGAGAACTGAAACACCACGG+TGG 0.793414 5:+90708379 None:intergenic
GTTAACGGCAACGTTACCGG+CGG 0.794826 5:-90708672 MsG0580029035.01.T01:CDS
GCGGTAACGTTACTCCAACG+AGG 0.804745 5:-90708653 MsG0580029035.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAAAAAATAAATAACAAA+TGG - Chr5:90705878-90705897 MsG0580029035.01.T01:intron 10.0%
!! TAAAATTATCATTATAATAG+AGG + Chr5:90707997-90708016 None:intergenic 10.0%
!!! TTGAAATTTTTTAATGTTAA+AGG - Chr5:90706547-90706566 MsG0580029035.01.T01:intron 10.0%
!! AATTATAGTGTTATATGTAA+GGG - Chr5:90706025-90706044 MsG0580029035.01.T01:intron 15.0%
!! ACAAAACAAAAAACAATTAT+GGG + Chr5:90705805-90705824 None:intergenic 15.0%
!! ATTATAAGGTGTAAATTTAT+CGG + Chr5:90708122-90708141 None:intergenic 15.0%
!! CATAGAATTACTATATTATA+AGG + Chr5:90708136-90708155 None:intergenic 15.0%
!! TAATTAATAATAATACCGAA+TGG - Chr5:90705917-90705936 MsG0580029035.01.T01:intron 15.0%
!! TAATTATAGTGTTATATGTA+AGG - Chr5:90706024-90706043 MsG0580029035.01.T01:intron 15.0%
!! TACAAAACAAAAAACAATTA+TGG + Chr5:90705806-90705825 None:intergenic 15.0%
!! TATAATATAGTAATTCTATG+AGG - Chr5:90708136-90708155 MsG0580029035.01.T01:CDS 15.0%
!!! AATTGATTTACAATTAATTG+AGG + Chr5:90707159-90707178 None:intergenic 15.0%
!!! AATTTTTTAATGTTAAAGGT+TGG - Chr5:90706551-90706570 MsG0580029035.01.T01:intron 15.0%
!!! ATAATTTGCAAAGAAAAAAT+AGG + Chr5:90707929-90707948 None:intergenic 15.0%
!!! ATGTTTTTTGGAATTTTATA+TGG - Chr5:90705846-90705865 MsG0580029035.01.T01:intron 15.0%
!!! CATCATATTTTATAATTTTG+TGG - Chr5:90708050-90708069 MsG0580029035.01.T01:CDS 15.0%
!!! TATTTTTTCTTTGCAAATTA+TGG - Chr5:90707928-90707947 MsG0580029035.01.T01:CDS 15.0%
!!! TTTTTTTACACACAATTATA+AGG + Chr5:90708195-90708214 None:intergenic 15.0%
!! AAAAAACAATTATGGGATTA+TGG + Chr5:90705798-90705817 None:intergenic 20.0%
!! AATATTAATATCAACCAACT+TGG - Chr5:90707409-90707428 MsG0580029035.01.T01:intron 20.0%
!! ATTACTACTATATGATATCA+TGG - Chr5:90705999-90706018 MsG0580029035.01.T01:intron 20.0%
!! CAAAATCTCTTATCAATTAT+TGG + Chr5:90706091-90706110 None:intergenic 20.0%
!! GAGTTAGATTAAACTAAATA+CGG - Chr5:90708427-90708446 MsG0580029035.01.T01:CDS 20.0%
!! TAAAAAATTAATATGAAGGG+TGG - Chr5:90706130-90706149 MsG0580029035.01.T01:intron 20.0%
!! TTATAAGGTGTAAATTTATC+GGG + Chr5:90708121-90708140 None:intergenic 20.0%
!! TTATTGGATCAATTTATTGT+TGG + Chr5:90706075-90706094 None:intergenic 20.0%
!! TTGTGTGTAAAAAAAAACTT+AGG - Chr5:90708200-90708219 MsG0580029035.01.T01:CDS 20.0%
!!! ATTTAATCTTGTTTTACCAA+TGG - Chr5:90705312-90705331 MsG0580029035.01.T01:intron 20.0%
!!! ATTTTTCGGGATTATAATTT+TGG + Chr5:90707040-90707059 None:intergenic 20.0%
!!! GATAATTTTACTAAGATTTG+AGG - Chr5:90708007-90708026 MsG0580029035.01.T01:intron 20.0%
!!! TCTTTCACACTATTATTTTT+CGG + Chr5:90707054-90707073 None:intergenic 20.0%
!!! TTAGTTTACTACGATTTTAT+TGG - Chr5:90705608-90705627 MsG0580029035.01.T01:intron 20.0%
!!! TTTAATCTTGTTTTACCAAT+GGG - Chr5:90705313-90705332 MsG0580029035.01.T01:intron 20.0%
!!! TTTTTGTTTTGTAAACTTTG+TGG - Chr5:90705813-90705832 MsG0580029035.01.T01:intron 20.0%
! AATGGTAATCATGTTACTAA+TGG - Chr5:90705350-90705369 MsG0580029035.01.T01:intron 25.0%
! ACCTTTAATTGACAACTTAT+AGG + Chr5:90707959-90707978 None:intergenic 25.0%
! ACTAATGTGATCACTAATTT+AGG + Chr5:90705593-90705612 None:intergenic 25.0%
! ATAATGCTCTTATTCGTAAT+GGG - Chr5:90708654-90708673 MsG0580029035.01.T01:CDS 25.0%
! CAATCCTAATGTATTGTTAT+AGG - Chr5:90706502-90706521 MsG0580029035.01.T01:intron 25.0%
! CATTTCTCTATAAGAAAAAC+TGG + Chr5:90707803-90707822 None:intergenic 25.0%
! CCTTTAATTGACAACTTATA+GGG + Chr5:90707958-90707977 None:intergenic 25.0%
! CTCATGGTTAAATACTAATT+GGG - Chr5:90707632-90707651 MsG0580029035.01.T01:intron 25.0%
! CTTTATTCAACAATTCAACT+AGG + Chr5:90706279-90706298 None:intergenic 25.0%
! GCAAAATAATTGTAAACCTT+TGG - Chr5:90707740-90707759 MsG0580029035.01.T01:intron 25.0%
! TAATGTGTTTAGTGTTTGTT+TGG + Chr5:90705648-90705667 None:intergenic 25.0%
! TAATTGAGGATTCTTTAGAT+TGG + Chr5:90707145-90707164 None:intergenic 25.0%
! TCAATAAAGAAACACTACAA+TGG + Chr5:90706974-90706993 None:intergenic 25.0%
! TCTCATGGTTAAATACTAAT+TGG - Chr5:90707631-90707650 MsG0580029035.01.T01:intron 25.0%
! TTAATCCAGTATGATTCAAA+TGG - Chr5:90705468-90705487 MsG0580029035.01.T01:intron 25.0%
! TTCAAATGATGATTGTGTTT+AGG - Chr5:90707386-90707405 MsG0580029035.01.T01:intron 25.0%
! TTCAACTAGGAAAACATTTA+AGG + Chr5:90706266-90706285 None:intergenic 25.0%
!! ACAACTACAAATGATTTTCA+CGG + Chr5:90707463-90707482 None:intergenic 25.0%
!! ATGTTTGTGTACAATTTTGT+GGG - Chr5:90706345-90706364 MsG0580029035.01.T01:intron 25.0%
!! ATTATAAGGTGTCAACTTAA+AGG + Chr5:90708181-90708200 None:intergenic 25.0%
!! CTTTTTGAATAAGAGATGAT+TGG - Chr5:90706736-90706755 MsG0580029035.01.T01:intron 25.0%
!! TATGTTTGTGTACAATTTTG+TGG - Chr5:90706344-90706363 MsG0580029035.01.T01:intron 25.0%
!! TCTCTTATTGGATTTTCATA+TGG - Chr5:90706378-90706397 MsG0580029035.01.T01:intron 25.0%
!! TTATAAGGTGTCAACTTAAA+GGG + Chr5:90708180-90708199 None:intergenic 25.0%
!!! CTTTCACACTATTATTTTTC+GGG + Chr5:90707053-90707072 None:intergenic 25.0%
!!! GTTAATTTTAGAAAAAAGCG+TGG + Chr5:90707190-90707209 None:intergenic 25.0%
!!! GTTATGTTTTCTTTTGTTGT+GGG - Chr5:90705752-90705771 MsG0580029035.01.T01:intron 25.0%
AAAATCTTTGGCCAAACTTT+AGG - Chr5:90706157-90706176 MsG0580029035.01.T01:intron 30.0%
AAACAATTATGGGATTATGG+AGG + Chr5:90705795-90705814 None:intergenic 30.0%
AAATACCATTGAACCATTGT+GGG + Chr5:90706798-90706817 None:intergenic 30.0%
AACAATTATGGGATTATGGA+GGG + Chr5:90705794-90705813 None:intergenic 30.0%
AATCATGTTACTAATGGTGA+TGG - Chr5:90705356-90705375 MsG0580029035.01.T01:intron 30.0%
ACACTGTTATCTGAAAGAAA+GGG - Chr5:90706597-90706616 MsG0580029035.01.T01:intron 30.0%
AGAATTTGGTACCTAAAGTT+TGG + Chr5:90706171-90706190 None:intergenic 30.0%
ATACTCTTTAGTTGATCTCA+TGG - Chr5:90707616-90707635 MsG0580029035.01.T01:intron 30.0%
ATAGTGTTATATGTAAGGGT+GGG - Chr5:90706029-90706048 MsG0580029035.01.T01:intron 30.0%
ATTGTTGGATCCATTATTGT+TGG + Chr5:90706060-90706079 None:intergenic 30.0%
CAAGTGATTGACATATAAAC+TGG - Chr5:90706454-90706473 MsG0580029035.01.T01:intron 30.0%
CAGTATGATTCAAATGGAAA+TGG - Chr5:90705474-90705493 MsG0580029035.01.T01:intron 30.0%
CATTTCCATTTGAATCATAC+TGG + Chr5:90705476-90705495 None:intergenic 30.0%
CCCTATAAGTTGTCAATTAA+AGG - Chr5:90707955-90707974 MsG0580029035.01.T01:intron 30.0%
CCTAATGTATTGTTATAGGA+GGG - Chr5:90706506-90706525 MsG0580029035.01.T01:intron 30.0%
GAAAATAAAACGATCCAATG+TGG - Chr5:90707575-90707594 MsG0580029035.01.T01:intron 30.0%
GAAATCAAACACAACTGAAA+TGG - Chr5:90707486-90707505 MsG0580029035.01.T01:intron 30.0%
GATAATGCTCTTATTCGTAA+TGG - Chr5:90708653-90708672 MsG0580029035.01.T01:CDS 30.0%
GGAGGGTTAAGTAAAAAAAA+TGG - Chr5:90706222-90706241 MsG0580029035.01.T01:intron 30.0%
GGGTTAAGTAAAAAAAATGG+TGG - Chr5:90706225-90706244 MsG0580029035.01.T01:intron 30.0%
GTCATCAATTTCACATCAAA+CGG - Chr5:90708396-90708415 MsG0580029035.01.T01:CDS 30.0%
TAAATACCATTGAACCATTG+TGG + Chr5:90706799-90706818 None:intergenic 30.0%
TACACTGTTATCTGAAAGAA+AGG - Chr5:90706596-90706615 MsG0580029035.01.T01:intron 30.0%
TAGTATCCTTAGAAATTGGA+GGG - Chr5:90706205-90706224 MsG0580029035.01.T01:intron 30.0%
TATAGTGTTATATGTAAGGG+TGG - Chr5:90706028-90706047 MsG0580029035.01.T01:intron 30.0%
TCAAAAGTTTCTTTCCAAGT+TGG + Chr5:90707426-90707445 None:intergenic 30.0%
TCCTAATGTATTGTTATAGG+AGG - Chr5:90706505-90706524 MsG0580029035.01.T01:intron 30.0%
TGTTGAATAAAGAGAGACAT+AGG - Chr5:90706287-90706306 MsG0580029035.01.T01:intron 30.0%
! ACTGCTTGATTTGAAACATT+TGG - Chr5:90707294-90707313 MsG0580029035.01.T01:intron 30.0%
! CTTTGATTTCTTGCAAGTAT+AGG + Chr5:90708227-90708246 None:intergenic 30.0%
! GCAGCAGATAATTTAGAATT+TGG + Chr5:90706185-90706204 None:intergenic 30.0%
! GGTTATGTTTTCTTTTGTTG+TGG - Chr5:90705751-90705770 MsG0580029035.01.T01:intron 30.0%
! GTTTCTTTTGTGATCATCAA+CGG + Chr5:90704863-90704882 None:intergenic 30.0%
! TACTAAGATTTGAGGTTACA+TGG - Chr5:90708015-90708034 MsG0580029035.01.T01:intron 30.0%
! TGCTTATATGGATGAGTTTT+GGG - Chr5:90708553-90708572 MsG0580029035.01.T01:CDS 30.0%
! TTCGGGATTATAATTTTGGA+TGG + Chr5:90707036-90707055 None:intergenic 30.0%
! TTGACTAAAGCATTTGCAAA+TGG + Chr5:90708774-90708793 None:intergenic 30.0%
!! AATAAGAGATGATTGGTTTC+GGG - Chr5:90706743-90706762 MsG0580029035.01.T01:intron 30.0%
!! GAATAAGAGATGATTGGTTT+CGG - Chr5:90706742-90706761 MsG0580029035.01.T01:intron 30.0%
!! TCTTTTGTTGTGGGTTTAAA+GGG - Chr5:90705761-90705780 MsG0580029035.01.T01:intron 30.0%
!! TGTTTGTGTAGTTCTGAATT+TGG - Chr5:90705964-90705983 MsG0580029035.01.T01:intron 30.0%
!! TTCTTTTGTTGTGGGTTTAA+AGG - Chr5:90705760-90705779 MsG0580029035.01.T01:intron 30.0%
!!! ATATAAACTGGTTTTGTGCA+AGG - Chr5:90706466-90706485 MsG0580029035.01.T01:intron 30.0%
AAAGTTGAATGTGCATTCTC+TGG - Chr5:90708625-90708644 MsG0580029035.01.T01:CDS 35.0%
AAATTCCTAACTCCCAAATC+TGG + Chr5:90707109-90707128 None:intergenic 35.0%
AACTGAAATGGAGATTGCTA+AGG - Chr5:90707498-90707517 MsG0580029035.01.T01:intron 35.0%
AAGAAGGATAGTTGGAAAAG+TGG + Chr5:90706951-90706970 None:intergenic 35.0%
AAGGGTGGAGTTAAAATCTT+TGG - Chr5:90706145-90706164 MsG0580029035.01.T01:intron 35.0%
ACAGAAGAATGGAAAAGTGA+AGG - Chr5:90706620-90706639 MsG0580029035.01.T01:intron 35.0%
ACCATTGTGGGAAATATCTA+TGG + Chr5:90706786-90706805 None:intergenic 35.0%
ACTCTCTTCGTAAAATGATC+CGG + Chr5:90704631-90704650 None:intergenic 35.0%
ACTTAACCCTCCAATTTCTA+AGG + Chr5:90706214-90706233 None:intergenic 35.0%
AGAAACACTACAATGGAAGA+AGG + Chr5:90706967-90706986 None:intergenic 35.0%
AGAAGGATAGTTGGAAAAGT+GGG + Chr5:90706950-90706969 None:intergenic 35.0%
AGGTTGTGGTGGTATTATTA+GGG - Chr5:90708478-90708497 MsG0580029035.01.T01:CDS 35.0%
CAATGAAGAGAATTTGCAAG+AGG - Chr5:90705279-90705298 MsG0580029035.01.T01:intron 35.0%
CCCTCCTATAACAATACATT+AGG + Chr5:90706509-90706528 None:intergenic 35.0%
CTAGTATCCTTAGAAATTGG+AGG - Chr5:90706204-90706223 MsG0580029035.01.T01:intron 35.0%
CTCTATAAGAAAAACTGGAG+AGG + Chr5:90707798-90707817 None:intergenic 35.0%
CTGCTAGTATCCTTAGAAAT+TGG - Chr5:90706201-90706220 MsG0580029035.01.T01:intron 35.0%
CTTGATCACATAAGTTCACA+AGG + Chr5:90705688-90705707 None:intergenic 35.0%
GAGAAAATTCGTCGTATGAT+AGG - Chr5:90708701-90708720 MsG0580029035.01.T01:CDS 35.0%
GAGGAATGATATCTCTTCAA+GGG - Chr5:90705041-90705060 MsG0580029035.01.T01:intron 35.0%
GATTACCATTACTCATAGCA+TGG + Chr5:90705340-90705359 None:intergenic 35.0%
GATTCAAATGGAAATGGTAG+TGG - Chr5:90705480-90705499 MsG0580029035.01.T01:intron 35.0%
GTAGCAAAAGTTGTCACAAA+TGG + Chr5:90707838-90707857 None:intergenic 35.0%
GTTAAATACTAATTGGGCCA+TGG - Chr5:90707638-90707657 MsG0580029035.01.T01:intron 35.0%
GTTCAATGGTATTTAGCGAT+TGG - Chr5:90706804-90706823 MsG0580029035.01.T01:intron 35.0%
TAAAGAGAGACATAGGAGAA+TGG - Chr5:90706294-90706313 MsG0580029035.01.T01:intron 35.0%
TACAATGGAAGAAGGATAGT+TGG + Chr5:90706959-90706978 None:intergenic 35.0%
TATTTCCCACAATGGTTCAA+TGG - Chr5:90706790-90706809 MsG0580029035.01.T01:intron 35.0%
TCCATAGATATTTCCCACAA+TGG - Chr5:90706782-90706801 MsG0580029035.01.T01:intron 35.0%
TTATCATAGACTCACCACAT+TGG + Chr5:90707592-90707611 None:intergenic 35.0%
! GCTTATATGGATGAGTTTTG+GGG - Chr5:90708554-90708573 MsG0580029035.01.T01:CDS 35.0%
! GGATTTTCAGATCCAGATTT+GGG - Chr5:90707094-90707113 MsG0580029035.01.T01:intron 35.0%
! GTGCTTATATGGATGAGTTT+TGG - Chr5:90708552-90708571 MsG0580029035.01.T01:CDS 35.0%
! TATTGAGATGACCTGTCTTT+TGG - Chr5:90705547-90705566 MsG0580029035.01.T01:intron 35.0%
! TTGCTAATGCTACTTATGAG+AGG - Chr5:90705230-90705249 MsG0580029035.01.T01:intron 35.0%
!! CATGTTTGCACATGCTTTTT+AGG - Chr5:90706659-90706678 MsG0580029035.01.T01:intron 35.0%
!! CTGTCTTTTGGTTGGTATTA+CGG - Chr5:90705559-90705578 MsG0580029035.01.T01:intron 35.0%
!! TCGTATGATAGGTTTTGTGT+GGG - Chr5:90708712-90708731 MsG0580029035.01.T01:CDS 35.0%
!!! GGTAGTGTCACAATGTTTTT+TGG - Chr5:90705834-90705853 MsG0580029035.01.T01:intron 35.0%
AAATACTAATTGGGCCATGG+TGG - Chr5:90707641-90707660 MsG0580029035.01.T01:intron 40.0%
AAGAAGCAAGAGACGGAAAT+GGG - Chr5:90707073-90707092 MsG0580029035.01.T01:intron 40.0%
AATACTAATTGGGCCATGGT+GGG - Chr5:90707642-90707661 MsG0580029035.01.T01:intron 40.0%
AATGGAATACTTTCCCACCA+TGG + Chr5:90707658-90707677 None:intergenic 40.0%
AGACAGGTCATCTCAATATG+AGG + Chr5:90705545-90705564 None:intergenic 40.0%
ATACCGAATGGTTTCTGCTT+TGG - Chr5:90705929-90705948 MsG0580029035.01.T01:intron 40.0%
ATCTCAATATGAGGTGGATG+TGG + Chr5:90705536-90705555 None:intergenic 40.0%
ATTATGGGATTATGGAGGGA+AGG + Chr5:90705790-90705809 None:intergenic 40.0%
CAGGTTGTGGTGGTATTATT+AGG - Chr5:90708477-90708496 MsG0580029035.01.T01:CDS 40.0%
CAGTGTGTGTAGTGCTTATA+TGG - Chr5:90708541-90708560 MsG0580029035.01.T01:CDS 40.0%
CGTAATACCAACCAAAAGAC+AGG + Chr5:90705561-90705580 None:intergenic 40.0%
CTCTCGAGATAAAGTTCCAA+AGG + Chr5:90707759-90707778 None:intergenic 40.0%
CTCTCTTCGTAAAATGATCC+GGG + Chr5:90704630-90704649 None:intergenic 40.0%
CTTCCAAAGCAGAAACCATT+CGG + Chr5:90705935-90705954 None:intergenic 40.0%
GAAAGAAAGGGACAGAAGAA+TGG - Chr5:90706609-90706628 MsG0580029035.01.T01:intron 40.0%
GAATGATATCTCTTCAAGGG+AGG - Chr5:90705044-90705063 MsG0580029035.01.T01:intron 40.0%
GATGCTTCTTGCAGTGAAAA+TGG - Chr5:90708449-90708468 MsG0580029035.01.T01:CDS 40.0%
GGAGGAATGATATCTCTTCA+AGG - Chr5:90705040-90705059 MsG0580029035.01.T01:intron 40.0%
GGTAGTTGAGAGTCTCTTAT+TGG - Chr5:90706366-90706385 MsG0580029035.01.T01:intron 40.0%
GGTTGTGGTGGTATTATTAG+GGG - Chr5:90708479-90708498 MsG0580029035.01.T01:CDS 40.0%
GTCAACTTAAAGGGAAGAGT+TGG + Chr5:90708171-90708190 None:intergenic 40.0%
GTGAAAGAAGAAGCAAGAGA+CGG - Chr5:90707066-90707085 MsG0580029035.01.T01:intron 40.0%
TAATTCAGAGAGCAACGACT+TGG - Chr5:90707238-90707257 MsG0580029035.01.T01:intron 40.0%
TACTTATGAGAGGTTGCCTT+TGG - Chr5:90705240-90705259 MsG0580029035.01.T01:intron 40.0%
TCCTCATCTTCATCTTCCAA+AGG + Chr5:90705259-90705278 None:intergenic 40.0%
TGAAATGGAGATTGCTAAGG+TGG - Chr5:90707501-90707520 MsG0580029035.01.T01:intron 40.0%
TGAAGAGATATCATTCCTCC+CGG + Chr5:90705040-90705059 None:intergenic 40.0%
TGATAGATGAATGGGTATGG+AGG + Chr5:90706911-90706930 None:intergenic 40.0%
TGGTGATAGATGAATGGGTA+TGG + Chr5:90706914-90706933 None:intergenic 40.0%
TTTACGAAGAGAGTCACGAA+GGG - Chr5:90704637-90704656 MsG0580029035.01.T01:CDS 40.0%
TTTATCTTGCTGGAGGTCAA+GGG - Chr5:90705137-90705156 MsG0580029035.01.T01:intron 40.0%
TTTCTCAAAGACCTTCCCAT+AGG + Chr5:90708687-90708706 None:intergenic 40.0%
! GCTCTTATTCGTAATGGGAA+AGG - Chr5:90708659-90708678 MsG0580029035.01.T01:CDS 40.0%
! GGGATTTTCAGATCCAGATT+TGG - Chr5:90707093-90707112 MsG0580029035.01.T01:intron 40.0%
! GTAATGGGAAAGGTTCCTAT+GGG - Chr5:90708669-90708688 MsG0580029035.01.T01:CDS 40.0%
! TCTTTTGTGATCATCAACGG+CGG + Chr5:90704860-90704879 None:intergenic 40.0%
! TTTTACGAAGAGAGTCACGA+AGG - Chr5:90704636-90704655 MsG0580029035.01.T01:CDS 40.0%
!! AATGGAAATGGTAGTGGACA+TGG - Chr5:90705486-90705505 MsG0580029035.01.T01:intron 40.0%
!! ATAACACTGCTAAGAGCGTT+TGG + Chr5:90704887-90704906 None:intergenic 40.0%
!! CATGTTACTAATGGTGATGG+TGG - Chr5:90705359-90705378 MsG0580029035.01.T01:intron 40.0%
!! CTTTTGGTTGGTATTACGGT+GGG - Chr5:90705563-90705582 MsG0580029035.01.T01:intron 40.0%
!! GTCGTATGATAGGTTTTGTG+TGG - Chr5:90708711-90708730 MsG0580029035.01.T01:CDS 40.0%
!! TCTTTTGGTTGGTATTACGG+TGG - Chr5:90705562-90705581 MsG0580029035.01.T01:intron 40.0%
!! TTGGAAAAGTGGGTTGATGT+TGG + Chr5:90706940-90706959 None:intergenic 40.0%
AACCTTGCTACTAGCTAGCT+AGG + Chr5:90705735-90705754 None:intergenic 45.0%
AATGGAGATTGCTAAGGTGG+TGG - Chr5:90707504-90707523 MsG0580029035.01.T01:intron 45.0%
AGCGTAGGATGAAATACTCC+CGG + Chr5:90704939-90704958 None:intergenic 45.0%
ATGATTCCATGAGAGGGAGA+TGG - Chr5:90707712-90707731 MsG0580029035.01.T01:intron 45.0%
ATGTTACCAACGTGACACTC+CGG - Chr5:90705002-90705021 MsG0580029035.01.T01:intron 45.0%
CAGATCCAGATTTGGGAGTT+AGG - Chr5:90707101-90707120 MsG0580029035.01.T01:intron 45.0%
CAGGTCATCTCAATATGAGG+TGG + Chr5:90705542-90705561 None:intergenic 45.0%
CGCTCTTAGCAGTGTTATCT+TGG - Chr5:90704889-90704908 MsG0580029035.01.T01:intron 45.0%
CTGACTGTTTATCTTGCTGG+AGG - Chr5:90705130-90705149 MsG0580029035.01.T01:intron 45.0%
CTTCGTAAAATGATCCGGGT+TGG + Chr5:90704626-90704645 None:intergenic 45.0%
GAAGAAGCAAGAGACGGAAA+TGG - Chr5:90707072-90707091 MsG0580029035.01.T01:intron 45.0%
GACGAACTTGAGAACAGCAA+TGG - Chr5:90704758-90704777 MsG0580029035.01.T01:CDS 45.0%
GATGCAGGTAGAAGATAGTG+TGG - Chr5:90707553-90707572 MsG0580029035.01.T01:intron 45.0%
GCAAGTAACGGTAGCGTTAA+CGG - Chr5:90704659-90704678 MsG0580029035.01.T01:CDS 45.0%
GGACTGACTGTTTATCTTGC+TGG - Chr5:90705127-90705146 MsG0580029035.01.T01:intron 45.0%
GGTGCAACTTCTCATGGATT+AGG - Chr5:90705435-90705454 MsG0580029035.01.T01:intron 45.0%
GTAGGCATGATTCCATGAGA+GGG - Chr5:90707706-90707725 MsG0580029035.01.T01:intron 45.0%
GTGGAACGAAAGACAAACTG+AGG - Chr5:90704568-90704587 MsG0580029035.01.T01:CDS 45.0%
GTGGGTGGAACCAACAATAA+TGG - Chr5:90706047-90706066 MsG0580029035.01.T01:intron 45.0%
GTGTTATATGTAAGGGTGGG+TGG - Chr5:90706032-90706051 MsG0580029035.01.T01:intron 45.0%
GTTATCTTGGAAGTCGCCAA+CGG - Chr5:90704902-90704921 MsG0580029035.01.T01:intron 45.0%
GTTGAATGTGCATTCTCTGG+TGG - Chr5:90708628-90708647 MsG0580029035.01.T01:CDS 45.0%
GTTTATCTTGCTGGAGGTCA+AGG - Chr5:90705136-90705155 MsG0580029035.01.T01:intron 45.0%
TACTCATAGCATGGTCCCAT+TGG + Chr5:90705331-90705350 None:intergenic 45.0%
TCTCAAGTTCGTCGTTAACG+TGG + Chr5:90704751-90704770 None:intergenic 45.0%
TGATTCCATGAGAGGGAGAT+GGG - Chr5:90707713-90707732 MsG0580029035.01.T01:intron 45.0%
TGGGACCATGCTATGAGTAA+TGG - Chr5:90705332-90705351 MsG0580029035.01.T01:intron 45.0%
TGTCACATTCTGTCACTCAG+CGG - Chr5:90705067-90705086 MsG0580029035.01.T01:intron 45.0%
TTAGGGGCAGCGATAATGAA+TGG - Chr5:90708495-90708514 MsG0580029035.01.T01:CDS 45.0%
! ATTGGTTTCGGGTGGCATTT+AGG - Chr5:90706754-90706773 MsG0580029035.01.T01:intron 45.0%
! CGTAATGGGAAAGGTTCCTA+TGG - Chr5:90708668-90708687 MsG0580029035.01.T01:CDS 45.0%
! GAGATGACCTGTCTTTTGGT+TGG - Chr5:90705551-90705570 MsG0580029035.01.T01:intron 45.0%
! GCCTTTGGAAGATGAAGATG+AGG - Chr5:90705255-90705274 MsG0580029035.01.T01:intron 45.0%
! GGTGGTGGTGATAGATGAAT+GGG + Chr5:90706919-90706938 None:intergenic 45.0%
! TTTCGGGTGGCATTTAGGAT+GGG - Chr5:90706759-90706778 MsG0580029035.01.T01:intron 45.0%
!! AAGAGATGATTGGTTTCGGG+TGG - Chr5:90706746-90706765 MsG0580029035.01.T01:intron 45.0%
!! GAAAAGTGGGTTGATGTTGG+TGG + Chr5:90706937-90706956 None:intergenic 45.0%
!! GTTGTTGGAGGACTGGTTAT+CGG - Chr5:90705163-90705182 MsG0580029035.01.T01:intron 45.0%
!! TGGTGGTGGTGATAGATGAA+TGG + Chr5:90706920-90706939 None:intergenic 45.0%
!! TTGTTGGAGGACTGGTTATC+GGG - Chr5:90705164-90705183 MsG0580029035.01.T01:intron 45.0%
!! AAAATAAAAAATTAATATGA+AGG - Chr5:90706126-90706145 MsG0580029035.01.T01:intron 5.0%
!! AAATAAAAAATTAATATGAA+GGG - Chr5:90706127-90706146 MsG0580029035.01.T01:intron 5.0%
!! TATTATTATTAATTATTCTT+TGG + Chr5:90705912-90705931 None:intergenic 5.0%
!!! TTTTATTTTAATTTGTTTAA+TGG + Chr5:90706115-90706134 None:intergenic 5.0%
AAACCAGGTGGCATTTAGGG+TGG + Chr5:90707684-90707703 None:intergenic 50.0%
AAATGCCACCTGGTTTCGGT+AGG - Chr5:90707688-90707707 MsG0580029035.01.T01:intron 50.0%
AAGACAAACTGAGGCGAACC+CGG - Chr5:90704577-90704596 MsG0580029035.01.T01:CDS 50.0%
ACAGTCAGTCCAGTAGCATC+AGG + Chr5:90705118-90705137 None:intergenic 50.0%
ACCGAAACCAGGTGGCATTT+AGG + Chr5:90707688-90707707 None:intergenic 50.0%
AGCAACACCGGGAACAGTAA+CGG - Chr5:90704725-90704744 MsG0580029035.01.T01:CDS 50.0%
AGCGTTAACGGCAACGTTAC+CGG - Chr5:90704671-90704690 MsG0580029035.01.T01:CDS 50.0%
AGGAGTAACACCAGCAACAC+CGG - Chr5:90704713-90704732 MsG0580029035.01.T01:CDS 50.0%
CCCTAAATGCCACCTGGTTT+CGG - Chr5:90707684-90707703 MsG0580029035.01.T01:intron 50.0%
CCGAAACCAGGTGGCATTTA+GGG + Chr5:90707687-90707706 None:intergenic 50.0%
CGCTGAGAACTGAAACACCA+CGG + Chr5:90704973-90704992 None:intergenic 50.0%
CGTGGTGTTTCAGTTCTCAG+CGG - Chr5:90704971-90704990 MsG0580029035.01.T01:intron 50.0%
GAAAATGGTCGAGCAGGTTG+TGG - Chr5:90708464-90708483 MsG0580029035.01.T01:CDS 50.0%
GAATCATGCCTACCGAAACC+AGG + Chr5:90707699-90707718 None:intergenic 50.0%
GAGTCACGAAGGGCAAGTAA+CGG - Chr5:90704647-90704666 MsG0580029035.01.T01:CDS 50.0%
GATTCCATGAGAGGGAGATG+GGG - Chr5:90707714-90707733 MsG0580029035.01.T01:intron 50.0%
GGACACGAACACGATGTTTC+TGG - Chr5:90705507-90705526 MsG0580029035.01.T01:intron 50.0%
GGCAGCGATAATGAATGGCT+TGG - Chr5:90708500-90708519 MsG0580029035.01.T01:CDS 50.0%
GGTAGGCATGATTCCATGAG+AGG - Chr5:90707705-90707724 MsG0580029035.01.T01:intron 50.0%
GTAGCTGCAACAACCATCAC+CGG + Chr5:90705208-90705227 None:intergenic 50.0%
GTCCTAGCTAGCTAGTAGCA+AGG - Chr5:90705730-90705749 MsG0580029035.01.T01:intron 50.0%
GTCGAAGGAGAGAACCGAAA+CGG - Chr5:90704599-90704618 MsG0580029035.01.T01:CDS 50.0%
TGAAATACTCCCGGCGATGT+CGG + Chr5:90704930-90704949 None:intergenic 50.0%
TGAGAACTGAAACACCACGG+TGG + Chr5:90704970-90704989 None:intergenic 50.0%
TGCAGTGAAAATGGTCGAGC+AGG - Chr5:90708458-90708477 MsG0580029035.01.T01:CDS 50.0%
TGGGAAAGGTTCCTATGGGA+AGG - Chr5:90708673-90708692 MsG0580029035.01.T01:CDS 50.0%
TGGGTATGGAGGAGAGAGAA+TGG + Chr5:90706900-90706919 None:intergenic 50.0%
TTTCGGTTCTCTCCTTCGAC+CGG + Chr5:90704599-90704618 None:intergenic 50.0%
! AACCAGGTGGCATTTAGGGT+GGG + Chr5:90707683-90707702 None:intergenic 50.0%
! CTTCTCTTTCTGGTCAGCAG+TGG - Chr5:90705387-90705406 MsG0580029035.01.T01:intron 50.0%
! GGTGGTTCTGCTTCTCTTTC+TGG - Chr5:90705377-90705396 MsG0580029035.01.T01:intron 50.0%
! GTGATCATCAACGGCGGTTT+TGG + Chr5:90704854-90704873 None:intergenic 50.0%
! GTTTCGGGTGGCATTTAGGA+TGG - Chr5:90706758-90706777 MsG0580029035.01.T01:intron 50.0%
! TGCTAAGGTGGTGGTTGAGT+GGG - Chr5:90707513-90707532 MsG0580029035.01.T01:intron 50.0%
! TGGCATTTAGGGTGGGTCAA+TGG + Chr5:90707676-90707695 None:intergenic 50.0%
! TTGCTAAGGTGGTGGTTGAG+TGG - Chr5:90707512-90707531 MsG0580029035.01.T01:intron 50.0%
! TTTCTGGTCAGCAGTGGAAG+TGG - Chr5:90705393-90705412 MsG0580029035.01.T01:intron 50.0%
!! AAGTGGGTTGATGTTGGTGG+TGG + Chr5:90706934-90706953 None:intergenic 50.0%
!! TTGCTGGTGTTACTCCTCGT+TGG + Chr5:90704710-90704729 None:intergenic 50.0%
!! TTTGGCTTGTTCTTCGACCC+CGG + Chr5:90704836-90704855 None:intergenic 50.0%
AACGTGGCCGTTACTGTTCC+CGG + Chr5:90704735-90704754 None:intergenic 55.0%
AATGGTCGAGCAGGTTGTGG+TGG - Chr5:90708467-90708486 MsG0580029035.01.T01:CDS 55.0%
ACTCCGGCAGCATAATGCTC+CGG - Chr5:90705018-90705037 MsG0580029035.01.T01:intron 55.0%
AGAACCGAAACGGTCCAACC+CGG - Chr5:90704609-90704628 MsG0580029035.01.T01:CDS 55.0%
CGTTGGAGTAACGTTACCGC+CGG + Chr5:90704693-90704712 None:intergenic 55.0%
GAGAACAGCAATGGCCGTTC+CGG - Chr5:90704767-90704786 MsG0580029035.01.T01:CDS 55.0%
GCGGTAACGTTACTCCAACG+AGG - Chr5:90704693-90704712 MsG0580029035.01.T01:CDS 55.0%
GGAGTAACACCAGCAACACC+GGG - Chr5:90704714-90704733 MsG0580029035.01.T01:CDS 55.0%
GTCAGTCCAGTAGCATCAGG+CGG + Chr5:90705115-90705134 None:intergenic 55.0%
GTTAACGGCAACGTTACCGG+CGG - Chr5:90704674-90704693 MsG0580029035.01.T01:CDS 55.0%
GTTTCAGTTCTCAGCGGCAC+TGG - Chr5:90704977-90704996 MsG0580029035.01.T01:intron 55.0%
TCATGCCTACCGAAACCAGG+TGG + Chr5:90707696-90707715 None:intergenic 55.0%
TGGTTGAGTGGGGACATGGA+GGG - Chr5:90707524-90707543 MsG0580029035.01.T01:intron 55.0%
TTCGGTTCTCTCCTTCGACC+GGG + Chr5:90704598-90704617 None:intergenic 55.0%
! ATCGGGTCGTTGATTGCGTC+CGG - Chr5:90705181-90705200 MsG0580029035.01.T01:intron 55.0%
! GCTAAGGTGGTGGTTGAGTG+GGG - Chr5:90707514-90707533 MsG0580029035.01.T01:intron 55.0%
! GGGGAGTGCACGAAAGTTTG+AGG - Chr5:90708573-90708592 MsG0580029035.01.T01:CDS 55.0%
! TGATCCGGGTTGGACCGTTT+CGG + Chr5:90704616-90704635 None:intergenic 55.0%
!! GTTACTGTTCCCGGTGTTGC+TGG + Chr5:90704726-90704745 None:intergenic 55.0%
AGGGCAGGTTGTTGGAGGAC+TGG - Chr5:90705156-90705175 MsG0580029035.01.T01:intron 60.0%
CATGGAGGGAGAGAGGATGC+AGG - Chr5:90707538-90707557 MsG0580029035.01.T01:intron 60.0%
CTCCGGCAGCATAATGCTCC+GGG - Chr5:90705019-90705038 MsG0580029035.01.T01:intron 60.0%
CTGAAACACCACGGTGGCGA+CGG + Chr5:90704964-90704983 None:intergenic 60.0%
CTGGTCAGCAGTGGAAGTGG+TGG - Chr5:90705396-90705415 MsG0580029035.01.T01:intron 60.0%
CTGTCCCCATCTCCCTCTCA+TGG + Chr5:90707721-90707740 None:intergenic 60.0%
GACCCACCCTAAATGCCACC+TGG - Chr5:90707678-90707697 MsG0580029035.01.T01:intron 60.0%
GGAGGTCAAGGGCAGGTTGT+TGG - Chr5:90705148-90705167 MsG0580029035.01.T01:intron 60.0%
GGCGGTGGTGCAACTTCTCA+TGG - Chr5:90705429-90705448 MsG0580029035.01.T01:intron 60.0%
GGTCAAGGGCAGGTTGTTGG+AGG - Chr5:90705151-90705170 MsG0580029035.01.T01:intron 60.0%
GTCAGCAGTGGAAGTGGTGG+TGG - Chr5:90705399-90705418 MsG0580029035.01.T01:intron 60.0%
GTGGTGGTTGAGTGGGGACA+TGG - Chr5:90707520-90707539 MsG0580029035.01.T01:intron 60.0%
GTGGTTGAGTGGGGACATGG+AGG - Chr5:90707523-90707542 MsG0580029035.01.T01:intron 60.0%
TCTTGCTGGAGGTCAAGGGC+AGG - Chr5:90705141-90705160 MsG0580029035.01.T01:intron 60.0%
TGCAACAACCATCACCGGCC+CGG + Chr5:90705203-90705222 None:intergenic 60.0%
! ATGCTGCCGGAGTGTCACGT+TGG + Chr5:90705011-90705030 None:intergenic 60.0%
! CTCCCGGAGCATTATGCTGC+CGG + Chr5:90705024-90705043 None:intergenic 60.0%
! TCGGGTCGTTGATTGCGTCC+GGG - Chr5:90705182-90705201 MsG0580029035.01.T01:intron 60.0%
!! AGCAGTGGAAGTGGTGGTGG+TGG - Chr5:90705402-90705421 MsG0580029035.01.T01:intron 60.0%
!! AGTGGAAGTGGTGGTGGTGG+TGG - Chr5:90705405-90705424 MsG0580029035.01.T01:intron 60.0%
ACGGTGGCGACGGTTAGCGT+AGG + Chr5:90704954-90704973 None:intergenic 65.0%
ACTGAGGCGAACCCGGTCGA+AGG - Chr5:90704584-90704603 MsG0580029035.01.T01:CDS 65.0%
ACTTCTGGCGGTCTGGTCGC+CGG + Chr5:90704789-90704808 None:intergenic 65.0%
AGACCGCCAGAAGTGGACGC+CGG - Chr5:90704795-90704814 MsG0580029035.01.T01:CDS 65.0%
CCAGTAGCATCAGGCGGCGA+AGG + Chr5:90705109-90705128 None:intergenic 65.0%
CCTTCGCCGCCTGATGCTAC+TGG - Chr5:90705106-90705125 MsG0580029035.01.T01:intron 65.0%
CGGCAGCATAATGCTCCGGG+AGG - Chr5:90705022-90705041 MsG0580029035.01.T01:intron 65.0%
GTAGCATCAGGCGGCGAAGG+CGG + Chr5:90705106-90705125 None:intergenic 65.0%
GTGGGGACATGGAGGGAGAG+AGG - Chr5:90707531-90707550 MsG0580029035.01.T01:intron 65.0%
TACGCTAACCGTCGCCACCG+TGG - Chr5:90704953-90704972 MsG0580029035.01.T01:intron 65.0%
! GGCTTGTTCTTCGACCCCGG+CGG + Chr5:90704833-90704852 None:intergenic 65.0%
! GTCGTTGATTGCGTCCGGGC+CGG - Chr5:90705186-90705205 MsG0580029035.01.T01:intron 65.0%
!! GGAAGTGGTGGTGGTGGTGG+CGG - Chr5:90705408-90705427 MsG0580029035.01.T01:intron 65.0%
ACGTGGCCGGCGTCCACTTC+TGG + Chr5:90704804-90704823 None:intergenic 70.0%
AGAAGTGGACGCCGGCCACG+TGG - Chr5:90704803-90704822 MsG0580029035.01.T01:CDS 70.0%
CCAACGGAGCCGACATCGCC+GGG - Chr5:90704918-90704937 MsG0580029035.01.T01:intron 70.0%
GATTGCGTCCGGGCCGGTGA+TGG - Chr5:90705192-90705211 MsG0580029035.01.T01:intron 70.0%
GCCAACGGAGCCGACATCGC+CGG - Chr5:90704917-90704936 MsG0580029035.01.T01:intron 70.0%
GGCGACCAGACCGCCAGAAG+TGG - Chr5:90704788-90704807 MsG0580029035.01.T01:CDS 70.0%
GGCGTCCACTTCTGGCGGTC+TGG + Chr5:90704796-90704815 None:intergenic 70.0%
TGGCCGGCGTCCACTTCTGG+CGG + Chr5:90704801-90704820 None:intergenic 70.0%
TGGCGGTCTGGTCGCCGGAA+CGG + Chr5:90704784-90704803 None:intergenic 70.0%
!! AGTGGTGGTGGTGGTGGCGG+CGG - Chr5:90705411-90705430 MsG0580029035.01.T01:intron 70.0%
GCATCAGGCGGCGAAGGCGG+AGG + Chr5:90705103-90705122 None:intergenic 75.0%
!! CCCGGCGATGTCGGCTCCGT+TGG + Chr5:90704921-90704940 None:intergenic 75.0%
! CCGGCCACGTGGACGTCCGC+CGG - Chr5:90704814-90704833 MsG0580029035.01.T01:CDS 80.0%
! CCGGCGGACGTCCACGTGGC+CGG + Chr5:90704817-90704836 None:intergenic 80.0%
! CGGCCACGTGGACGTCCGCC+GGG - Chr5:90704815-90704834 MsG0580029035.01.T01:CDS 80.0%
! GACCCCGGCGGACGTCCACG+TGG + Chr5:90704821-90704840 None:intergenic 80.0%
! GGCCACGTGGACGTCCGCCG+GGG - Chr5:90704816-90704835 MsG0580029035.01.T01:CDS 80.0%
!!! GGTGGTGGTGGTGGCGGCGG+TGG - Chr5:90705414-90705433 MsG0580029035.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 90704554 90708814 90704554 ID=MsG0580029035.01;Name=MsG0580029035.01
Chr5 mRNA 90704554 90708814 90704554 ID=MsG0580029035.01.T01;Parent=MsG0580029035.01;Name=MsG0580029035.01.T01;_AED=0.47;_eAED=0.48;_QI=0|0|0|0.66|1|1|3|0|406
Chr5 exon 90708021 90708814 90708021 ID=MsG0580029035.01.T01:exon:17734;Parent=MsG0580029035.01.T01
Chr5 exon 90707873 90707964 90707873 ID=MsG0580029035.01.T01:exon:17733;Parent=MsG0580029035.01.T01
Chr5 exon 90704554 90704888 90704554 ID=MsG0580029035.01.T01:exon:17732;Parent=MsG0580029035.01.T01
Chr5 CDS 90708021 90708814 90708021 ID=MsG0580029035.01.T01:cds;Parent=MsG0580029035.01.T01
Chr5 CDS 90707873 90707964 90707873 ID=MsG0580029035.01.T01:cds;Parent=MsG0580029035.01.T01
Chr5 CDS 90704554 90704888 90704554 ID=MsG0580029035.01.T01:cds;Parent=MsG0580029035.01.T01
Gene Sequence

>MsG0580029035.01.T01

ATGGCGAATCGATGGTGGAACGAAAGACAAACTGAGGCGAACCCGGTCGAAGGAGAGAACCGAAACGGTCCAACCCGGATCATTTTACGAAGAGAGTCACGAAGGGCAAGTAACGGTAGCGTTAACGGCAACGTTACCGGCGGTAACGTTACTCCAACGAGGAGTAACACCAGCAACACCGGGAACAGTAACGGCCACGTTAACGACGAACTTGAGAACAGCAATGGCCGTTCCGGCGACCAGACCGCCAGAAGTGGACGCCGGCCACGTGGACGTCCGCCGGGGTCGAAGAACAAGCCAAAACCGCCGTTGATGATCACAAAAGAAACTCCAAACGCTCTTAGCAGTGTTATCTTGGAAGTCGCCAACGGAGCCGACATCGCCGGGAGTATTTCATCCTACGCTAACCGTCGCCACCGTGGTGTTTCAGTTCTCAGCGGCACTGGTTATGTTACCAACGTGACACTCCGGCAGCATAATGCTCCGGGAGGAATGATATCTCTTCAAGGGAGGTGTCACATTCTGTCACTCAGCGGTGCTTTTTTGCCTCCGCCTTCGCCGCCTGATGCTACTGGACTGACTGTTTATCTTGCTGGAGGTCAAGGGCAGGTTGTTGGAGGACTGGTTATCGGGTCGTTGATTGCGTCCGGGCCGGTGATGGTTGTTGCAGCTACTTTTGCTAATGCTACTTATGAGAGGTTGCCTTTGGAAGATGAAGATGAGGACAATGAAGAGAATTTGCAAGAGGTTAATAACATATTTAATCTTGTTTTACCAATGGGACCATGCTATGACAGTGGAAGTGGTGGTGGTGGTGGCGGCGGTGGTGCAACTTCTCATGGATTAGGTGAAACAACTTTAATCCAGTATGATTCAAATGGAAATGGTTGTGGTGGTATTATTAGGGGCAGCGATAATGAATGGCTTGGCAGATTTGCTAAAAGCATCAGTGTGTGTAGTGCTTATATGGATGAGTTTTGGGGAGTGCACGAAAGTTTGAGGTATGCTATAAGCTTCGTTTTTCGTGCGATAAAGTTGAATGTGCATTCTCTGGTGGTTGATAATGCTCTTATTCGTAATGGGAAAGGTTCCTATGGGAAGGTCTTTGAGAAAATTCGTCGTATGATAGGTTTTGTGTGGGAAGTTATTCGTAAGCACTCGTATCGTGAAGCTATAACCATTTGCAAATGCTTTAGTCAATTATGCAAGCTTATTGCCTAG
Protein sequence

>MsG0580029035.01.T01

MANRWWNERQTEANPVEGENRNGPTRIILRRESRRASNGSVNGNVTGGNVTPTRSNTSNTGNSNGHVNDELENSNGRSGDQTARSGRRPRGRPPGSKNKPKPPLMITKETPNALSSVILEVANGADIAGSISSYANRRHRGVSVLSGTGYVTNVTLRQHNAPGGMISLQGRCHILSLSGAFLPPPSPPDATGLTVYLAGGQGQVVGGLVIGSLIASGPVMVVAATFANATYERLPLEDEDEDNEENLQEVNNIFNLVLPMGPCYDSGSGGGGGGGGATSHGLGETTLIQYDSNGNGCGGIIRGSDNEWLGRFAKSISVCSAYMDEFWGVHESLRYAISFVFRAIKLNVHSLVVDNALIRNGKGSYGKVFEKIRRMIGFVWEVIRKHSYREAITICKCFSQLCKLIA*