Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004276.01.T01 | XP_013468748.1 | 84.783 | 92 | 14 | 0 | 14 | 105 | 34 | 125 | 1.80E-47 | 158 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004276.01.T01 | Q9LTS6 | 44.444 | 72 | 33 | 1 | 13 | 77 | 33 | 104 | 1.89E-14 | 67.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004276.01.T01 | B3IWG1 | 84.783 | 92 | 14 | 0 | 14 | 105 | 34 | 125 | 8.61e-48 | 158 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047899.01 | MsG0180004276.01 | 0.842105 | 3.168259e-58 | 4.753934e-55 |
| MsG0080048152.01 | MsG0180004276.01 | 0.805249 | 1.462644e-49 | 7.700328e-47 |
| MsG0080048727.01 | MsG0180004276.01 | 0.844312 | 8.175344e-59 | 1.314559e-55 |
| MsG0080048773.01 | MsG0180004276.01 | 0.816213 | 6.208808e-52 | 4.372668e-49 |
| MsG0080048780.01 | MsG0180004276.01 | 0.812967 | 3.248149e-51 | 2.094116e-48 |
| MsG0080048802.01 | MsG0180004276.01 | 0.826905 | 2.098241e-54 | 1.994502e-51 |
| MsG0080048876.01 | MsG0180004276.01 | 0.868290 | 7.290024e-66 | 2.622991e-62 |
| MsG0080048878.01 | MsG0180004276.01 | 0.823397 | 1.415819e-53 | 1.217513e-50 |
| MsG0080049029.01 | MsG0180004276.01 | 0.821952 | 3.070480e-53 | 2.534552e-50 |
| MsG0080049039.01 | MsG0180004276.01 | 0.836233 | 1.055355e-56 | 1.322023e-53 |
| MsG0080049040.01 | MsG0180004276.01 | 0.880767 | 4.185078e-70 | 2.389923e-66 |
| MsG0080049068.01 | MsG0180004276.01 | 0.904575 | 1.062995e-79 | 1.654956e-75 |
| MsG0180000354.01 | MsG0180004276.01 | 0.894242 | 2.964532e-75 | 2.923029e-71 |
| MsG0180000355.01 | MsG0180004276.01 | 0.909726 | 4.141154e-82 | 8.167543e-78 |
| MsG0180000404.01 | MsG0180004276.01 | 0.802764 | 4.806031e-49 | 2.373943e-46 |
| MsG0180000509.01 | MsG0180004276.01 | 0.831546 | 1.569964e-55 | 1.709325e-52 |
| MsG0180000670.01 | MsG0180004276.01 | 0.829601 | 4.699014e-55 | 4.832332e-52 |
| MsG0180000671.01 | MsG0180004276.01 | 0.824592 | 7.426286e-54 | 6.607937e-51 |
| MsG0180000677.01 | MsG0180004276.01 | 0.833082 | 6.539646e-56 | 7.452159e-53 |
| MsG0180000678.01 | MsG0180004276.01 | 0.800405 | 1.463951e-48 | 6.810916e-46 |
| MsG0180001085.01 | MsG0180004276.01 | 0.853374 | 2.493073e-61 | 5.375286e-58 |
| MsG0180001100.01 | MsG0180004276.01 | 0.804746 | 1.862824e-49 | 9.682207e-47 |
| MsG0180001175.01 | MsG0180004276.01 | 0.854953 | 8.728234e-62 | 1.982822e-58 |
| MsG0180001270.01 | MsG0180004276.01 | 0.878595 | 2.473346e-69 | 1.299098e-65 |
| MsG0180001610.01 | MsG0180004276.01 | 0.820135 | 8.046503e-53 | 6.314239e-50 |
| MsG0180002399.01 | MsG0180004276.01 | 0.841628 | 4.234436e-58 | 6.258951e-55 |
| MsG0180002700.01 | MsG0180004276.01 | 0.803635 | 3.172386e-49 | 1.602297e-46 |
| MsG0180003353.01 | MsG0180004276.01 | 0.876944 | 9.328742e-69 | 4.607726e-65 |
| MsG0180003527.01 | MsG0180004276.01 | 0.803570 | 3.273395e-49 | 1.650650e-46 |
| MsG0180003531.01 | MsG0180004276.01 | 0.837199 | 5.983015e-57 | 7.714664e-54 |
| MsG0180003821.01 | MsG0180004276.01 | 0.869004 | 4.284393e-66 | 1.582196e-62 |
| MsG0180003885.01 | MsG0180004276.01 | 0.815823 | 7.587718e-52 | 5.286733e-49 |
| MsG0180003942.01 | MsG0180004276.01 | -0.823496 | 1.342728e-53 | 1.158067e-50 |
| MsG0180004046.01 | MsG0180004276.01 | 0.807283 | 5.451000e-50 | 3.024025e-47 |
| MsG0180004103.01 | MsG0180004276.01 | 0.828792 | 7.382890e-55 | 7.413846e-52 |
| MsG0180004115.01 | MsG0180004276.01 | 0.844100 | 9.318422e-59 | 1.488615e-55 |
| MsG0180004192.01 | MsG0180004276.01 | 0.873323 | 1.607770e-67 | 6.948193e-64 |
| MsG0180004276.01 | MsG0180004428.01 | 0.820687 | 6.012640e-53 | 4.790182e-50 |
| MsG0180004276.01 | MsG0180004448.01 | 0.882197 | 1.274511e-70 | 7.691708e-67 |
| MsG0180004276.01 | MsG0180004466.01 | 0.836730 | 7.884261e-57 | 1.002360e-53 |
| MsG0180004276.01 | MsG0180004493.01 | 0.878105 | 3.676359e-69 | 1.895283e-65 |
| MsG0180004276.01 | MsG0180004605.01 | -0.852969 | 3.255770e-61 | 6.923767e-58 |
| MsG0180004276.01 | MsG0180004733.01 | 0.822118 | 2.810955e-53 | 2.331272e-50 |
| MsG0180004276.01 | MsG0180004735.01 | 0.853911 | 1.747327e-61 | 3.835240e-58 |
| MsG0180004276.01 | MsG0180004759.01 | -0.828876 | 7.044714e-55 | 7.091115e-52 |
| MsG0180004276.01 | MsG0180005169.01 | 0.807876 | 4.080225e-50 | 2.298564e-47 |
| MsG0180004276.01 | MsG0180005349.01 | 0.829666 | 4.531822e-55 | 4.669317e-52 |
| MsG0180004276.01 | MsG0180005395.01 | -0.810252 | 1.263940e-50 | 7.581751e-48 |
| MsG0180004276.01 | MsG0180005397.01 | 0.801017 | 1.098008e-48 | 5.188605e-46 |
| MsG0180004276.01 | MsG0180005429.01 | 0.823176 | 1.595070e-53 | 1.363267e-50 |
| MsG0180004276.01 | MsG0180005492.01 | 0.813855 | 2.071705e-51 | 1.368281e-48 |
| MsG0180004276.01 | MsG0180005750.01 | 0.840254 | 9.714649e-58 | 1.375959e-54 |
| MsG0180004276.01 | MsG0180005755.01 | 0.822390 | 2.430777e-53 | 2.031899e-50 |
| MsG0180004276.01 | MsG0180005807.01 | 0.834505 | 2.883278e-56 | 3.428782e-53 |
| MsG0180004276.01 | MsG0180005871.01 | -0.826928 | 2.072690e-54 | 1.971474e-51 |
| MsG0180004276.01 | MsG0180005912.01 | 0.822420 | 2.391163e-53 | 2.000510e-50 |
| MsG0180004276.01 | MsG0180005961.01 | 0.871887 | 4.852696e-67 | 1.989192e-63 |
| MsG0180004276.01 | MsG0180005964.01 | 0.824237 | 9.001059e-54 | 7.926906e-51 |
| MsG0180004276.01 | MsG0180006031.01 | 0.858291 | 9.113631e-63 | 2.314625e-59 |
| MsG0180004276.01 | MsG0180006104.01 | 0.800198 | 1.612632e-48 | 7.463049e-46 |
| MsG0180004276.01 | MsG0180006136.01 | 0.802472 | 5.521458e-49 | 2.706984e-46 |
| MsG0180004276.01 | MsG0280006306.01 | -0.813921 | 2.003455e-51 | 1.325548e-48 |
| MsG0180004276.01 | MsG0280006805.01 | 0.826042 | 3.369593e-54 | 3.124686e-51 |
| MsG0180004276.01 | MsG0280007062.01 | 0.844261 | 8.437527e-59 | 1.354557e-55 |
| MsG0180004276.01 | MsG0280007075.01 | 0.823197 | 1.576801e-53 | 1.348460e-50 |
| MsG0180004276.01 | MsG0280007112.01 | 0.811034 | 8.564675e-51 | 5.245677e-48 |
| MsG0180004276.01 | MsG0280007165.01 | -0.818523 | 1.875092e-52 | 1.406909e-49 |
| MsG0180004276.01 | MsG0280007502.01 | 0.871401 | 7.031004e-67 | 2.832633e-63 |
| MsG0180004276.01 | MsG0280007771.01 | 0.823282 | 1.506414e-53 | 1.291362e-50 |
| MsG0180004276.01 | MsG0280007814.01 | 0.824450 | 8.020721e-54 | 7.106263e-51 |
| MsG0180004276.01 | MsG0280007852.01 | 0.800910 | 1.154372e-48 | 5.440153e-46 |
| MsG0180004276.01 | MsG0280007903.01 | 0.819721 | 1.000860e-52 | 7.763130e-50 |
| MsG0180004276.01 | MsG0280008388.01 | 0.856810 | 2.501624e-62 | 6.043290e-59 |
| MsG0180004276.01 | MsG0280008394.01 | 0.874474 | 6.565576e-68 | 2.959814e-64 |
| MsG0180004276.01 | MsG0280008451.01 | 0.865732 | 4.771413e-65 | 1.568804e-61 |
| MsG0180004276.01 | MsG0280008591.01 | 0.838215 | 3.282655e-57 | 4.366669e-54 |
| MsG0180004276.01 | MsG0280008738.01 | 0.800812 | 1.209315e-48 | 5.684278e-46 |
| MsG0180004276.01 | MsG0280008928.01 | 0.821853 | 3.236672e-53 | 2.664410e-50 |
| MsG0180004276.01 | MsG0280008929.01 | 0.836522 | 8.906600e-57 | 1.125178e-53 |
| MsG0180004276.01 | MsG0280009256.01 | 0.836159 | 1.101581e-56 | 1.376708e-53 |
| MsG0180004276.01 | MsG0280009685.01 | 0.878691 | 2.287397e-69 | 1.205987e-65 |
| MsG0180004276.01 | MsG0280009755.01 | 0.832270 | 1.040602e-55 | 1.157147e-52 |
| MsG0180004276.01 | MsG0280009756.01 | 0.848850 | 4.713267e-60 | 8.766213e-57 |
| MsG0180004276.01 | MsG0280009918.01 | 0.826046 | 3.362154e-54 | 3.118154e-51 |
| MsG0180004276.01 | MsG0280010271.01 | 0.824988 | 5.987341e-54 | 5.388249e-51 |
| MsG0180004276.01 | MsG0280010353.01 | 0.854125 | 1.515925e-61 | 3.351536e-58 |
| MsG0180004276.01 | MsG0280010376.01 | 0.849107 | 3.997943e-60 | 7.498909e-57 |
| MsG0180004276.01 | MsG0280010503.01 | 0.851366 | 9.301272e-61 | 1.878496e-57 |
| MsG0180004276.01 | MsG0280010564.01 | 0.833148 | 6.296983e-56 | 7.189567e-53 |
| MsG0180004276.01 | MsG0280010926.01 | 0.809044 | 2.298164e-50 | 1.335195e-47 |
| MsG0180004276.01 | MsG0280011027.01 | 0.827357 | 1.635807e-54 | 1.575710e-51 |
| MsG0180004276.01 | MsG0280011073.01 | 0.820239 | 7.619907e-53 | 5.995892e-50 |
| MsG0180004276.01 | MsG0280011255.01 | 0.817885 | 2.613997e-52 | 1.927123e-49 |
| MsG0180004276.01 | MsG0380011652.01 | 0.824746 | 6.828757e-54 | 6.103275e-51 |
| MsG0180004276.01 | MsG0380012011.01 | 0.838682 | 2.487322e-57 | 3.356458e-54 |
| MsG0180004276.01 | MsG0380013472.01 | 0.805594 | 1.237760e-49 | 6.574711e-47 |
| MsG0180004276.01 | MsG0380014584.01 | 0.875665 | 2.576127e-68 | 1.213129e-64 |
| MsG0180004276.01 | MsG0380014588.01 | 0.826616 | 2.460407e-54 | 2.319118e-51 |
| MsG0180004276.01 | MsG0380014940.01 | 0.850582 | 1.547414e-60 | 3.045319e-57 |
| MsG0180004276.01 | MsG0380015066.01 | -0.833583 | 4.907501e-56 | 5.675987e-53 |
| MsG0180004276.01 | MsG0380015352.01 | 0.814179 | 1.757185e-51 | 1.170811e-48 |
| MsG0180004276.01 | MsG0380015399.01 | 0.828564 | 8.381595e-55 | 8.361798e-52 |
| MsG0180004276.01 | MsG0380015491.01 | 0.818339 | 2.063903e-52 | 1.540781e-49 |
| MsG0180004276.01 | MsG0380015603.01 | 0.896254 | 4.399408e-76 | 4.722476e-72 |
| MsG0180004276.01 | MsG0380015742.01 | 0.805583 | 1.244415e-49 | 6.608298e-47 |
| MsG0180004276.01 | MsG0380015743.01 | 0.811808 | 5.818398e-51 | 3.636860e-48 |
| MsG0180004276.01 | MsG0380015784.01 | 0.806002 | 1.016346e-49 | 5.455690e-47 |
| MsG0180004276.01 | MsG0380015870.01 | 0.811452 | 6.953713e-51 | 4.305961e-48 |
| MsG0180004276.01 | MsG0380015896.01 | 0.817694 | 2.887969e-52 | 2.117955e-49 |
| MsG0180004276.01 | MsG0380015902.01 | 0.836079 | 1.154585e-56 | 1.439463e-53 |
| MsG0180004276.01 | MsG0380016057.01 | 0.810973 | 8.829959e-51 | 5.399819e-48 |
| MsG0180004276.01 | MsG0380016135.01 | 0.826105 | 3.255845e-54 | 3.024574e-51 |
| MsG0180004276.01 | MsG0380016137.01 | 0.822735 | 2.020833e-53 | 1.705866e-50 |
| MsG0180004276.01 | MsG0380016192.01 | 0.867389 | 1.418786e-65 | 4.945849e-62 |
| MsG0180004276.01 | MsG0380016194.01 | 0.859501 | 3.960368e-63 | 1.048152e-59 |
| MsG0180004276.01 | MsG0380016249.01 | 0.809662 | 1.694030e-50 | 1.000595e-47 |
| MsG0180004276.01 | MsG0380016284.01 | 0.826552 | 2.547659e-54 | 2.396901e-51 |
| MsG0180004276.01 | MsG0380016347.01 | -0.835517 | 1.602350e-56 | 1.964044e-53 |
| MsG0180004276.01 | MsG0380016544.01 | 0.823192 | 1.580906e-53 | 1.351807e-50 |
| MsG0180004276.01 | MsG0380016671.01 | 0.829191 | 5.909744e-55 | 6.005283e-52 |
| MsG0180004276.01 | MsG0380016730.01 | 0.801046 | 1.082817e-48 | 5.120644e-46 |
| MsG0180004276.01 | MsG0380016820.01 | 0.819648 | 1.040050e-52 | 8.050432e-50 |
| MsG0180004276.01 | MsG0380016836.01 | 0.825869 | 3.705657e-54 | 3.419566e-51 |
| MsG0180004276.01 | MsG0380017028.01 | 0.806552 | 7.781947e-50 | 4.236257e-47 |
| MsG0180004276.01 | MsG0380017087.01 | 0.836317 | 1.004541e-56 | 1.261552e-53 |
| MsG0180004276.01 | MsG0380017088.01 | 0.834704 | 2.569875e-56 | 3.073634e-53 |
| MsG0180004276.01 | MsG0380017094.01 | -0.887435 | 1.431134e-72 | 1.064189e-68 |
| MsG0180004276.01 | MsG0380017703.01 | 0.897556 | 1.254377e-76 | 1.424947e-72 |
| MsG0180004276.01 | MsG0380017728.01 | 0.848922 | 4.501245e-60 | 8.391939e-57 |
| MsG0180004276.01 | MsG0380017785.01 | 0.807181 | 5.730958e-50 | 3.170771e-47 |
| MsG0180004276.01 | MsG0380018037.01 | 0.829309 | 5.531482e-55 | 5.641033e-52 |
| MsG0180004276.01 | MsG0380018061.01 | 0.850968 | 1.204434e-60 | 2.400743e-57 |
| MsG0180004276.01 | MsG0380018069.01 | 0.845183 | 4.761612e-59 | 7.869986e-56 |
| MsG0180004276.01 | MsG0480018091.01 | -0.803528 | 3.339007e-49 | 1.681904e-46 |
| MsG0180004276.01 | MsG0480018584.01 | 0.821177 | 4.637828e-53 | 3.745988e-50 |
| MsG0180004276.01 | MsG0480018644.01 | 0.885682 | 6.587582e-72 | 4.564599e-68 |
| MsG0180004276.01 | MsG0480018850.01 | 0.822799 | 1.952161e-53 | 1.650802e-50 |
| MsG0180004276.01 | MsG0480018911.01 | 0.881083 | 3.221738e-70 | 1.861345e-66 |
| MsG0180004276.01 | MsG0480019007.01 | 0.833097 | 6.486897e-56 | 7.395024e-53 |
| MsG0180004276.01 | MsG0480019221.01 | 0.833567 | 4.953083e-56 | 5.726096e-53 |
| MsG0180004276.01 | MsG0480019340.01 | 0.841927 | 3.530153e-58 | 5.266843e-55 |
| MsG0180004276.01 | MsG0480019356.01 | 0.841890 | 3.611252e-58 | 5.381450e-55 |
| MsG0180004276.01 | MsG0480019751.01 | 0.827348 | 1.643991e-54 | 1.583176e-51 |
| MsG0180004276.01 | MsG0480019956.01 | 0.869533 | 2.884164e-66 | 1.086261e-62 |
| MsG0180004276.01 | MsG0480019971.01 | 0.835130 | 2.007588e-56 | 2.432181e-53 |
| MsG0180004276.01 | MsG0480020315.01 | 0.832178 | 1.096331e-55 | 1.215963e-52 |
| MsG0180004276.01 | MsG0480020408.01 | 0.827331 | 1.660051e-54 | 1.597804e-51 |
| MsG0180004276.01 | MsG0480020690.01 | 0.913446 | 6.093208e-84 | 1.441613e-79 |
| MsG0180004276.01 | MsG0480020753.01 | 0.861898 | 7.424200e-64 | 2.133237e-60 |
| MsG0180004276.01 | MsG0480020783.01 | 0.830592 | 2.692625e-55 | 2.849694e-52 |
| MsG0180004276.01 | MsG0480020890.01 | 0.863596 | 2.224043e-64 | 6.779387e-61 |
| MsG0180004276.01 | MsG0480021077.01 | -0.802469 | 5.528062e-49 | 2.710065e-46 |
| MsG0180004276.01 | MsG0480021168.01 | 0.809237 | 2.089263e-50 | 1.220179e-47 |
| MsG0180004276.01 | MsG0480021349.01 | 0.820771 | 5.750051e-53 | 4.592007e-50 |
| MsG0180004276.01 | MsG0480021754.01 | 0.828316 | 9.618552e-55 | 9.526216e-52 |
| MsG0180004276.01 | MsG0480021768.01 | 0.863647 | 2.143602e-64 | 6.546394e-61 |
| MsG0180004276.01 | MsG0480021776.01 | -0.810174 | 1.313901e-50 | 7.865151e-48 |
| MsG0180004276.01 | MsG0480021783.01 | 0.832436 | 9.463871e-56 | 1.057744e-52 |
| MsG0180004276.01 | MsG0480021803.01 | 0.879426 | 1.258617e-69 | 6.821235e-66 |
| MsG0180004276.01 | MsG0480021814.01 | 0.807448 | 5.029734e-50 | 2.802274e-47 |
| MsG0180004276.01 | MsG0480021876.01 | -0.809467 | 1.865613e-50 | 1.096185e-47 |
| MsG0180004276.01 | MsG0480022149.01 | 0.846394 | 2.233100e-59 | 3.838238e-56 |
| MsG0180004276.01 | MsG0480022200.01 | 0.800853 | 1.185823e-48 | 5.580198e-46 |
| MsG0180004276.01 | MsG0480022239.01 | 0.811160 | 8.045112e-51 | 4.943449e-48 |
| MsG0180004276.01 | MsG0480022260.01 | 0.848036 | 7.914131e-60 | 1.433470e-56 |
| MsG0180004276.01 | MsG0480022401.01 | 0.858844 | 6.233234e-63 | 1.612961e-59 |
| MsG0180004276.01 | MsG0480022514.01 | 0.819279 | 1.262432e-52 | 9.671433e-50 |
| MsG0180004276.01 | MsG0480022537.01 | 0.804424 | 2.174892e-49 | 1.120922e-46 |
| MsG0180004276.01 | MsG0480022586.01 | 0.835782 | 1.373433e-56 | 1.696869e-53 |
| MsG0180004276.01 | MsG0480022587.01 | 0.802072 | 6.671777e-49 | 3.237861e-46 |
| MsG0180004276.01 | MsG0480022624.01 | 0.827112 | 1.873070e-54 | 1.791046e-51 |
| MsG0180004276.01 | MsG0480022643.01 | 0.876083 | 1.850598e-68 | 8.852852e-65 |
| MsG0180004276.01 | MsG0480022647.01 | 0.839051 | 1.996059e-57 | 2.723860e-54 |
| MsG0180004276.01 | MsG0480022672.01 | 0.831005 | 2.133298e-55 | 2.285478e-52 |
| MsG0180004276.01 | MsG0480022780.01 | 0.842694 | 2.211838e-58 | 3.380374e-55 |
| MsG0180004276.01 | MsG0480022872.01 | -0.807429 | 5.077389e-50 | 2.827369e-47 |
| MsG0180004276.01 | MsG0480022891.01 | 0.814513 | 1.482696e-51 | 9.969491e-49 |
| MsG0180004276.01 | MsG0480022921.01 | 0.833639 | 4.750159e-56 | 5.503153e-53 |
| MsG0180004276.01 | MsG0480023073.01 | 0.818843 | 1.586084e-52 | 1.200664e-49 |
| MsG0180004276.01 | MsG0480023098.01 | 0.816236 | 6.134991e-52 | 4.323305e-49 |
| MsG0180004276.01 | MsG0480023216.01 | 0.808693 | 2.731514e-50 | 1.572193e-47 |
| MsG0180004276.01 | MsG0480023314.01 | 0.874281 | 7.635269e-68 | 3.417115e-64 |
| MsG0180004276.01 | MsG0480023367.01 | 0.838193 | 3.325605e-57 | 4.420862e-54 |
| MsG0180004276.01 | MsG0480023384.01 | 0.888712 | 4.630129e-73 | 3.626663e-69 |
| MsG0180004276.01 | MsG0480023389.01 | 0.818697 | 1.712030e-52 | 1.290659e-49 |
| MsG0180004276.01 | MsG0480023565.01 | 0.821559 | 3.786620e-53 | 3.091047e-50 |
| MsG0180004276.01 | MsG0480023569.01 | 0.822564 | 2.214919e-53 | 1.860674e-50 |
| MsG0180004276.01 | MsG0480023661.01 | 0.845758 | 3.325545e-59 | 5.600231e-56 |
| MsG0180004276.01 | MsG0480023845.01 | 0.813839 | 2.089220e-51 | 1.379229e-48 |
| MsG0180004276.01 | MsG0480023867.01 | 0.800451 | 1.432437e-48 | 6.671963e-46 |
| MsG0180004276.01 | MsG0480023909.01 | 0.805052 | 1.607817e-49 | 8.422396e-47 |
| MsG0180004276.01 | MsG0480023992.01 | 0.813674 | 2.271025e-51 | 1.492632e-48 |
| MsG0180004276.01 | MsG0580024619.01 | 0.851530 | 8.358656e-61 | 1.696819e-57 |
| MsG0180004276.01 | MsG0580024679.01 | 0.835694 | 1.445675e-56 | 1.781598e-53 |
| MsG0180004276.01 | MsG0580024873.01 | 0.848849 | 4.715943e-60 | 8.770855e-57 |
| MsG0180004276.01 | MsG0580024930.01 | -0.807996 | 3.847964e-50 | 2.174659e-47 |
| MsG0180004276.01 | MsG0580025366.01 | 0.847039 | 1.487676e-59 | 2.610644e-56 |
| MsG0180004276.01 | MsG0580025369.01 | -0.804040 | 2.614783e-49 | 1.334492e-46 |
| MsG0180004276.01 | MsG0580025411.01 | 0.834939 | 2.241876e-56 | 2.700830e-53 |
| MsG0180004276.01 | MsG0580025502.01 | 0.841188 | 5.528231e-58 | 8.059469e-55 |
| MsG0180004276.01 | MsG0580025607.01 | 0.838329 | 3.068264e-57 | 4.095610e-54 |
| MsG0180004276.01 | MsG0580025627.01 | 0.861457 | 1.012223e-63 | 2.866150e-60 |
| MsG0180004276.01 | MsG0580025668.01 | 0.846518 | 2.066001e-59 | 3.565471e-56 |
| MsG0180004276.01 | MsG0580025971.01 | 0.883704 | 3.582650e-71 | 2.296681e-67 |
| MsG0180004276.01 | MsG0580026175.01 | 0.865082 | 7.640087e-65 | 2.454743e-61 |
| MsG0180004276.01 | MsG0580026206.01 | 0.886520 | 3.184769e-72 | 2.282457e-68 |
| MsG0180004276.01 | MsG0580026450.01 | 0.809556 | 1.784896e-50 | 1.051269e-47 |
| MsG0180004276.01 | MsG0580027103.01 | 0.804980 | 1.664674e-49 | 8.704226e-47 |
| MsG0180004276.01 | MsG0580027394.01 | 0.879005 | 1.773500e-69 | 9.460866e-66 |
| MsG0180004276.01 | MsG0580027763.01 | 0.810396 | 1.176885e-50 | 7.085887e-48 |
| MsG0180004276.01 | MsG0580027887.01 | 0.803860 | 2.849295e-49 | 1.447494e-46 |
| MsG0180004276.01 | MsG0580028024.01 | 0.835944 | 1.249552e-56 | 1.551295e-53 |
| MsG0180004276.01 | MsG0580028033.01 | 0.841376 | 4.933039e-58 | 7.234651e-55 |
| MsG0180004276.01 | MsG0580028059.01 | 0.880888 | 3.786622e-70 | 2.171685e-66 |
| MsG0180004276.01 | MsG0580028235.01 | -0.808667 | 2.767534e-50 | 1.591832e-47 |
| MsG0180004276.01 | MsG0580028306.01 | 0.800478 | 1.414744e-48 | 6.593844e-46 |
| MsG0180004276.01 | MsG0580028335.01 | 0.850300 | 1.856131e-60 | 3.619439e-57 |
| MsG0180004276.01 | MsG0580028630.01 | 0.850293 | 1.865135e-60 | 3.636132e-57 |
| MsG0180004276.01 | MsG0580029035.01 | 0.825995 | 3.457639e-54 | 3.202144e-51 |
| MsG0180004276.01 | MsG0580029325.01 | 0.850279 | 1.881987e-60 | 3.667114e-57 |
| MsG0180004276.01 | MsG0580029529.01 | 0.827431 | 1.570848e-54 | 1.516235e-51 |
| MsG0180004276.01 | MsG0580029734.01 | 0.827960 | 1.172312e-54 | 1.149148e-51 |
| MsG0180004276.01 | MsG0580029879.01 | 0.800906 | 1.156780e-48 | 5.450895e-46 |
| MsG0180004276.01 | MsG0580029905.01 | 0.810450 | 1.145636e-50 | 6.907815e-48 |
| MsG0180004276.01 | MsG0580029919.01 | 0.836938 | 6.978075e-57 | 8.927335e-54 |
| MsG0180004276.01 | MsG0680030515.01 | 0.830307 | 3.160904e-55 | 3.317595e-52 |
| MsG0180004276.01 | MsG0680030516.01 | 0.833816 | 4.291852e-56 | 4.999141e-53 |
| MsG0180004276.01 | MsG0680030555.01 | 0.825652 | 4.172045e-54 | 3.826004e-51 |
| MsG0180004276.01 | MsG0680030627.01 | 0.874542 | 6.228403e-68 | 2.813990e-64 |
| MsG0180004276.01 | MsG0680030784.01 | 0.827212 | 1.771763e-54 | 1.699310e-51 |
| MsG0180004276.01 | MsG0680030858.01 | 0.850000 | 2.253451e-60 | 4.351127e-57 |
| MsG0180004276.01 | MsG0680030957.01 | 0.810557 | 1.086453e-50 | 6.569715e-48 |
| MsG0180004276.01 | MsG0680031010.01 | 0.889613 | 2.069942e-73 | 1.682714e-69 |
| MsG0180004276.01 | MsG0680031469.01 | 0.874575 | 6.065323e-68 | 2.744013e-64 |
| MsG0180004276.01 | MsG0680031689.01 | 0.842802 | 2.069994e-58 | 3.174212e-55 |
| MsG0180004276.01 | MsG0680031716.01 | -0.803092 | 4.110176e-49 | 2.047087e-46 |
| MsG0180004276.01 | MsG0680031939.01 | 0.831759 | 1.391317e-55 | 1.524467e-52 |
| MsG0180004276.01 | MsG0680032006.01 | 0.801769 | 7.701925e-49 | 3.708887e-46 |
| MsG0180004276.01 | MsG0680032057.01 | 0.863551 | 2.295781e-64 | 6.986907e-61 |
| MsG0180004276.01 | MsG0680032060.01 | 0.809899 | 1.506506e-50 | 8.953440e-48 |
| MsG0180004276.01 | MsG0680032830.01 | 0.876369 | 1.474597e-68 | 7.130409e-65 |
| MsG0180004276.01 | MsG0680032832.01 | 0.803019 | 4.256231e-49 | 2.115874e-46 |
| MsG0180004276.01 | MsG0680032850.01 | 0.805238 | 1.470272e-49 | 7.738622e-47 |
| MsG0180004276.01 | MsG0680033377.01 | 0.908312 | 1.961057e-81 | 3.619822e-77 |
| MsG0180004276.01 | MsG0680034064.01 | 0.897068 | 2.012028e-76 | 2.235860e-72 |
| MsG0180004276.01 | MsG0680034766.01 | 0.803331 | 3.669389e-49 | 1.838814e-46 |
| MsG0180004276.01 | MsG0680034767.01 | 0.821217 | 4.539669e-53 | 3.670931e-50 |
| MsG0180004276.01 | MsG0680034838.01 | 0.804009 | 2.653303e-49 | 1.353085e-46 |
| MsG0180004276.01 | MsG0680035307.01 | 0.804217 | 2.401723e-49 | 1.231275e-46 |
| MsG0180004276.01 | MsG0680035731.01 | 0.870030 | 1.984695e-66 | 7.608526e-63 |
| MsG0180004276.01 | MsG0680035791.01 | 0.838398 | 2.945499e-57 | 3.940258e-54 |
| MsG0180004276.01 | MsG0680035859.01 | 0.832415 | 9.576162e-56 | 1.069654e-52 |
| MsG0180004276.01 | MsG0780035992.01 | 0.851547 | 8.268646e-61 | 1.679505e-57 |
| MsG0180004276.01 | MsG0780036243.01 | 0.811372 | 7.236850e-51 | 4.471786e-48 |
| MsG0180004276.01 | MsG0780036307.01 | 0.800364 | 1.491954e-48 | 6.934098e-46 |
| MsG0180004276.01 | MsG0780036362.01 | 0.817984 | 2.482854e-52 | 1.835351e-49 |
| MsG0180004276.01 | MsG0780036385.01 | 0.823218 | 1.558777e-53 | 1.333827e-50 |
| MsG0180004276.01 | MsG0780036443.01 | 0.802063 | 6.700764e-49 | 3.251158e-46 |
| MsG0180004276.01 | MsG0780036544.01 | -0.822588 | 2.186503e-53 | 1.838104e-50 |
| MsG0180004276.01 | MsG0780036659.01 | 0.813919 | 2.005482e-51 | 1.326830e-48 |
| MsG0180004276.01 | MsG0780036660.01 | 0.816629 | 5.010893e-52 | 3.569236e-49 |
| MsG0180004276.01 | MsG0780036711.01 | 0.823791 | 1.145418e-53 | 9.962024e-51 |
| MsG0180004276.01 | MsG0780036715.01 | 0.813944 | 1.980438e-51 | 1.311110e-48 |
| MsG0180004276.01 | MsG0780036792.01 | 0.801073 | 1.069241e-48 | 5.059746e-46 |
| MsG0180004276.01 | MsG0780036979.01 | 0.831581 | 1.538894e-55 | 1.677225e-52 |
| MsG0180004276.01 | MsG0780037093.01 | 0.808694 | 2.730556e-50 | 1.571670e-47 |
| MsG0180004276.01 | MsG0780037157.01 | 0.874980 | 4.417694e-68 | 2.029099e-64 |
| MsG0180004276.01 | MsG0780037330.01 | 0.823840 | 1.115554e-53 | 9.715387e-51 |
| MsG0180004276.01 | MsG0780037395.01 | 0.815627 | 8.393078e-52 | 5.817020e-49 |
| MsG0180004276.01 | MsG0780037399.01 | 0.825163 | 5.446425e-54 | 4.925891e-51 |
| MsG0180004276.01 | MsG0780037662.01 | 0.806191 | 9.271741e-50 | 5.001087e-47 |
| MsG0180004276.01 | MsG0780037701.01 | 0.834707 | 2.564571e-56 | 3.067587e-53 |
| MsG0180004276.01 | MsG0780038351.01 | 0.858546 | 7.648793e-63 | 1.959173e-59 |
| MsG0180004276.01 | MsG0780038584.01 | -0.807916 | 4.000483e-50 | 2.256031e-47 |
| MsG0180004276.01 | MsG0780038616.01 | 0.876292 | 1.567795e-68 | 7.559294e-65 |
| MsG0180004276.01 | MsG0780038784.01 | 0.887453 | 1.408391e-72 | 1.048023e-68 |
| MsG0180004276.01 | MsG0780038846.01 | 0.801360 | 9.342629e-49 | 4.452952e-46 |
| MsG0180004276.01 | MsG0780038948.01 | 0.832327 | 1.007310e-55 | 1.122057e-52 |
| MsG0180004276.01 | MsG0780039675.01 | 0.885226 | 9.757467e-72 | 6.642095e-68 |
| MsG0180004276.01 | MsG0780039746.01 | 0.840084 | 1.075814e-57 | 1.515923e-54 |
| MsG0180004276.01 | MsG0780039747.01 | -0.802701 | 4.952016e-49 | 2.442083e-46 |
| MsG0180004276.01 | MsG0780039975.01 | 0.815742 | 7.911937e-52 | 5.500900e-49 |
| MsG0180004276.01 | MsG0780039997.01 | -0.835036 | 2.119524e-56 | 2.560658e-53 |
| MsG0180004276.01 | MsG0780040284.01 | 0.902134 | 1.322313e-78 | 1.845882e-74 |
| MsG0180004276.01 | MsG0780040388.01 | 0.807986 | 3.865741e-50 | 2.184170e-47 |
| MsG0180004276.01 | MsG0780040430.01 | 0.802556 | 5.303291e-49 | 2.605582e-46 |
| MsG0180004276.01 | MsG0780040443.01 | 0.829133 | 6.104057e-55 | 6.191614e-52 |
| MsG0180004276.01 | MsG0780040825.01 | -0.811271 | 7.608885e-51 | 4.689177e-48 |
| MsG0180004276.01 | MsG0780041138.01 | 0.838055 | 3.609114e-57 | 4.778066e-54 |
| MsG0180004276.01 | MsG0780041174.01 | 0.823924 | 1.065875e-53 | 9.304664e-51 |
| MsG0180004276.01 | MsG0780041175.01 | 0.803643 | 3.160974e-49 | 1.596835e-46 |
| MsG0180004276.01 | MsG0780041729.01 | -0.819678 | 1.023653e-52 | 7.930126e-50 |
| MsG0180004276.01 | MsG0880041947.01 | 0.880943 | 3.616996e-70 | 2.078803e-66 |
| MsG0180004276.01 | MsG0880042890.01 | 0.869300 | 3.432791e-66 | 1.281777e-62 |
| MsG0180004276.01 | MsG0880043277.01 | 0.842860 | 1.997855e-58 | 3.069261e-55 |
| MsG0180004276.01 | MsG0880044005.01 | 0.840126 | 1.048865e-57 | 1.479759e-54 |
| MsG0180004276.01 | MsG0880044142.01 | 0.847742 | 9.540194e-60 | 1.712216e-56 |
| MsG0180004276.01 | MsG0880044392.01 | 0.899106 | 2.750482e-77 | 3.350631e-73 |
| MsG0180004276.01 | MsG0880044414.01 | 0.806589 | 7.645048e-50 | 4.165439e-47 |
| MsG0180004276.01 | MsG0880044487.01 | 0.822293 | 2.559471e-53 | 2.133541e-50 |
| MsG0180004276.01 | MsG0880044524.01 | 0.802738 | 4.864240e-49 | 2.401120e-46 |
| MsG0180004276.01 | MsG0880044704.01 | 0.816523 | 5.293331e-52 | 3.759441e-49 |
| MsG0180004276.01 | MsG0880045010.01 | -0.842645 | 2.279289e-58 | 3.477901e-55 |
| MsG0180004276.01 | MsG0880045101.01 | 0.846838 | 1.689336e-59 | 2.945479e-56 |
| MsG0180004276.01 | MsG0880045158.01 | 0.843898 | 1.055634e-58 | 1.675868e-55 |
| MsG0180004276.01 | MsG0880045558.01 | 0.858043 | 1.079806e-62 | 2.719557e-59 |
| MsG0180004276.01 | MsG0880046054.01 | 0.814818 | 1.269434e-51 | 8.605387e-49 |
| MsG0180004276.01 | MsG0880046267.01 | 0.805424 | 1.344105e-49 | 7.108303e-47 |
| MsG0180004276.01 | MsG0880046382.01 | 0.830782 | 2.419510e-55 | 2.575067e-52 |
| MsG0180004276.01 | MsG0880046517.01 | 0.858734 | 6.721467e-63 | 1.732692e-59 |
| MsG0180004276.01 | MsG0880046764.01 | 0.808680 | 2.749036e-50 | 1.581762e-47 |
| MsG0180004276.01 | MsG0880046765.01 | 0.867928 | 9.529264e-66 | 3.384828e-62 |
| MsG0180004276.01 | MsG0880046791.01 | 0.832175 | 1.098406e-55 | 1.218119e-52 |
| MsG0180004276.01 | MsG0880046867.01 | 0.910701 | 1.395413e-82 | 2.886387e-78 |
| MsG0180004276.01 | MsG0880047168.01 | 0.815736 | 7.936547e-52 | 5.517057e-49 |
| MsG0180004276.01 | MsG0880047325.01 | 0.815794 | 7.701415e-52 | 5.362154e-49 |
| MsG0180004276.01 | MsG0880047422.01 | -0.854873 | 9.211496e-62 | 2.087096e-58 |
| MsG0180004276.01 | MsG0880047442.01 | 0.833258 | 5.914694e-56 | 6.774844e-53 |
| MsG0180004276.01 | MsG0880047587.01 | 0.818651 | 1.754230e-52 | 1.320767e-49 |
| MsG0180004276.01 | MsG0880047656.01 | 0.847783 | 9.295781e-60 | 1.670388e-56 |
| MsG0180004276.01 | MsG0880047696.01 | 0.821992 | 3.006792e-53 | 2.484739e-50 |
| MsG0180004276.01 | MsG0880047703.01 | 0.908581 | 1.462172e-81 | 2.729938e-77 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004276.01.T01 | MTR_1g076310 | 84.783 | 92 | 14 | 0 | 14 | 105 | 34 | 125 | 2.18e-51 | 158 |
| MsG0180004276.01.T01 | MTR_2g039750 | 47.945 | 73 | 31 | 1 | 13 | 78 | 33 | 105 | 9.98e-16 | 67.8 |
| MsG0180004276.01.T01 | MTR_5g014070 | 47.945 | 73 | 31 | 1 | 13 | 78 | 33 | 105 | 1.05e-15 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004276.01.T01 | AT5G56940 | 44.444 | 72 | 33 | 1 | 13 | 77 | 33 | 104 | 1.92e-15 | 67.4 |
| MsG0180004276.01.T01 | AT4G34620 | 50.000 | 50 | 25 | 0 | 13 | 62 | 33 | 82 | 2.98e-14 | 63.5 |
Find 37 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAATTCACAGTAACAAAT+AGG | 0.272085 | 1:+75923456 | None:intergenic |
| TGGATGGCTGCTCTTCGTTC+GGG | 0.277399 | 1:+75923073 | None:intergenic |
| TTGGATGGCTGCTCTTCGTT+CGG | 0.292007 | 1:+75923072 | None:intergenic |
| ACCATCAACTTCTTTGTCAT+TGG | 0.341893 | 1:+75923053 | None:intergenic |
| TCTTCGTTCGGGGTATCAAC+AGG | 0.369294 | 1:+75923084 | None:intergenic |
| AATTGCAATGTATACCAGTT+TGG | 0.380322 | 1:-75923440 | MsG0180004276.01.T01:CDS |
| GGGAATAACAGCCTTATGTT+TGG | 0.392068 | 1:-75922890 | MsG0180004276.01.T01:three_prime_UTR |
| CCCTCCTTCTCATCCCAAAC+TGG | 0.413028 | 1:+75923426 | None:intergenic |
| ATTGCAATGTATACCAGTTT+GGG | 0.434755 | 1:-75923439 | MsG0180004276.01.T01:CDS |
| GCAATTCACAGTAACAAATA+GGG | 0.438622 | 1:+75923457 | None:intergenic |
| TCCAATGACAAAGAAGTTGA+TGG | 0.440759 | 1:-75923054 | MsG0180004276.01.T01:intron |
| TTTAGGTATTGGCTTTCTGT+TGG | 0.451329 | 1:-75923192 | MsG0180004276.01.T01:intron |
| AAAATAAATAAGTAAACAAC+AGG | 0.456386 | 1:+75922661 | None:intergenic |
| AAACGGAAAGGTGGACTGTC+TGG | 0.470726 | 1:-75923114 | MsG0180004276.01.T01:CDS |
| TCAACTTCTTTGTCATTGGA+TGG | 0.482393 | 1:+75923057 | None:intergenic |
| AGCCTTATGTTTGGAGAAGG+TGG | 0.488363 | 1:-75922881 | MsG0180004276.01.T01:three_prime_UTR |
| AGGCAGGTTTACAAATGAAA+CGG | 0.502953 | 1:-75923131 | MsG0180004276.01.T01:CDS |
| ACCCACCTTCTCCAAACATA+AGG | 0.511336 | 1:+75922879 | None:intergenic |
| GCAGAAGCTGTACTTTCTAT+CGG | 0.514830 | 1:-75922930 | MsG0180004276.01.T01:CDS |
| GCCTTATGTTTGGAGAAGGT+GGG | 0.530520 | 1:-75922880 | MsG0180004276.01.T01:three_prime_UTR |
| AGACTCTCCACAGGTTCTGA+AGG | 0.549004 | 1:+75923162 | None:intergenic |
| AACAGCCTTATGTTTGGAGA+AGG | 0.551470 | 1:-75922884 | MsG0180004276.01.T01:three_prime_UTR |
| ACCAGTTTGGGATGAGAAGG+AGG | 0.553779 | 1:-75923427 | MsG0180004276.01.T01:CDS |
| TATACCAGTTTGGGATGAGA+AGG | 0.569595 | 1:-75923430 | MsG0180004276.01.T01:CDS |
| TTGTTAACTGCTTGATCATG+AGG | 0.574436 | 1:-75922702 | MsG0180004276.01.T01:three_prime_UTR |
| TGCTCAACCTTCAGAACCTG+TGG | 0.580737 | 1:-75923169 | MsG0180004276.01.T01:CDS |
| ATGCATACATGACATGGTAG+AGG | 0.582753 | 1:+75922765 | None:intergenic |
| CGGCTTACAAGTTTAACTGA+GGG | 0.587865 | 1:-75922910 | MsG0180004276.01.T01:exon |
| TTGAATAAAAGACTCTCCAC+AGG | 0.595461 | 1:+75923153 | None:intergenic |
| GGATGGCTGCTCTTCGTTCG+GGG | 0.597237 | 1:+75923074 | None:intergenic |
| CTTCGTTCGGGGTATCAACA+GGG | 0.597733 | 1:+75923085 | None:intergenic |
| AAGTTGACGATTTGCAATGG+AGG | 0.617421 | 1:+75922840 | None:intergenic |
| TCAAGCATGCATACATGACA+TGG | 0.632655 | 1:+75922759 | None:intergenic |
| CCAGTTTGGGATGAGAAGGA+GGG | 0.633963 | 1:-75923426 | MsG0180004276.01.T01:intron |
| TCGGCTTACAAGTTTAACTG+AGG | 0.642616 | 1:-75922911 | MsG0180004276.01.T01:exon |
| TTACAAATGAAACGGAAAGG+TGG | 0.647965 | 1:-75923123 | MsG0180004276.01.T01:CDS |
| GGTTTACAAATGAAACGGAA+AGG | 0.664042 | 1:-75923126 | MsG0180004276.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCATTTACATTTTATTTT+AGG | - | Chr1:75923158-75923177 | MsG0180004276.01.T01:CDS | 10.0% |
| !! | AAAATAAATAAGTAAACAAC+AGG | + | Chr1:75923460-75923479 | None:intergenic | 15.0% |
| !! | AAAGTAAATCAAGTTAAAAA+AGG | + | Chr1:75922743-75922762 | None:intergenic | 15.0% |
| !! | AATCAAGTTAAAAAAGGATT+AGG | + | Chr1:75922737-75922756 | None:intergenic | 20.0% |
| !!! | AGTTATTTGTACACAATTTT+GGG | - | Chr1:75922848-75922867 | MsG0180004276.01.T01:three_prime_UTR | 20.0% |
| !!! | TAGTTATTTGTACACAATTT+TGG | - | Chr1:75922847-75922866 | MsG0180004276.01.T01:three_prime_UTR | 20.0% |
| !! | GTTATTTGTACACAATTTTG+GGG | - | Chr1:75922849-75922868 | MsG0180004276.01.T01:three_prime_UTR | 25.0% |
| AAAAAGTTGACGATTTGCAA+TGG | + | Chr1:75923284-75923303 | None:intergenic | 30.0% | |
| AATTGCAATGTATACCAGTT+TGG | - | Chr1:75922678-75922697 | MsG0180004276.01.T01:three_prime_UTR | 30.0% | |
| AGATTCACATTCAAAAGTGA+AGG | + | Chr1:75923102-75923121 | None:intergenic | 30.0% | |
| ATTGCAATGTATACCAGTTT+GGG | - | Chr1:75922679-75922698 | MsG0180004276.01.T01:three_prime_UTR | 30.0% | |
| GCAATTCACAGTAACAAATA+GGG | + | Chr1:75922664-75922683 | None:intergenic | 30.0% | |
| GGAAATTAGTGATAATTGTG+GGG | - | Chr1:75922870-75922889 | MsG0180004276.01.T01:three_prime_UTR | 30.0% | |
| GGGAAATTAGTGATAATTGT+GGG | - | Chr1:75922869-75922888 | MsG0180004276.01.T01:three_prime_UTR | 30.0% | |
| TGCAATTCACAGTAACAAAT+AGG | + | Chr1:75922665-75922684 | None:intergenic | 30.0% | |
| ACCATCAACTTCTTTGTCAT+TGG | + | Chr1:75923068-75923087 | None:intergenic | 35.0% | |
| AGGCAGGTTTACAAATGAAA+CGG | - | Chr1:75922987-75923006 | MsG0180004276.01.T01:intron | 35.0% | |
| ATCTCGTTTAGCATTGTTTC+TGG | - | Chr1:75923118-75923137 | MsG0180004276.01.T01:CDS | 35.0% | |
| CAATACCTAAAGAACATGAG+GGG | + | Chr1:75922917-75922936 | None:intergenic | 35.0% | |
| CCAATACCTAAAGAACATGA+GGG | + | Chr1:75922918-75922937 | None:intergenic | 35.0% | |
| GGGGAAATTAGTGATAATTG+TGG | - | Chr1:75922868-75922887 | MsG0180004276.01.T01:three_prime_UTR | 35.0% | |
| GGTTTACAAATGAAACGGAA+AGG | - | Chr1:75922992-75923011 | MsG0180004276.01.T01:intron | 35.0% | |
| TCAACTTCTTTGTCATTGGA+TGG | + | Chr1:75923064-75923083 | None:intergenic | 35.0% | |
| TCCAATGACAAAGAAGTTGA+TGG | - | Chr1:75923064-75923083 | MsG0180004276.01.T01:CDS | 35.0% | |
| TTACAAATGAAACGGAAAGG+TGG | - | Chr1:75922995-75923014 | MsG0180004276.01.T01:intron | 35.0% | |
| TTGAATAAAAGACTCTCCAC+AGG | + | Chr1:75922968-75922987 | None:intergenic | 35.0% | |
| TTGTTAACTGCTTGATCATG+AGG | - | Chr1:75923416-75923435 | MsG0180004276.01.T01:intron | 35.0% | |
| ! | TCTCGTTTAGCATTGTTTCT+GGG | - | Chr1:75923119-75923138 | MsG0180004276.01.T01:CDS | 35.0% |
| ! | TGTGGAGAGTCTTTTATTCA+AGG | - | Chr1:75922967-75922986 | MsG0180004276.01.T01:intron | 35.0% |
| !! | TTTAGGTATTGGCTTTCTGT+TGG | - | Chr1:75922926-75922945 | MsG0180004276.01.T01:CDS | 35.0% |
| AAGTTGACGATTTGCAATGG+AGG | + | Chr1:75923281-75923300 | None:intergenic | 40.0% | |
| ATGCATACATGACATGGTAG+AGG | + | Chr1:75923356-75923375 | None:intergenic | 40.0% | |
| CCCTCATGTTCTTTAGGTAT+TGG | - | Chr1:75922915-75922934 | MsG0180004276.01.T01:exon | 40.0% | |
| CGGCTTACAAGTTTAACTGA+GGG | - | Chr1:75923208-75923227 | MsG0180004276.01.T01:intron | 40.0% | |
| GCAGAAGCTGTACTTTCTAT+CGG | - | Chr1:75923188-75923207 | MsG0180004276.01.T01:CDS | 40.0% | |
| GCCAATACCTAAAGAACATG+AGG | + | Chr1:75922919-75922938 | None:intergenic | 40.0% | |
| GTGATAATTGTGGGGATCAT+TGG | - | Chr1:75922878-75922897 | MsG0180004276.01.T01:three_prime_UTR | 40.0% | |
| TCAAGCATGCATACATGACA+TGG | + | Chr1:75923362-75923381 | None:intergenic | 40.0% | |
| TCGGCTTACAAGTTTAACTG+AGG | - | Chr1:75923207-75923226 | MsG0180004276.01.T01:intron | 40.0% | |
| ! | AACAGCCTTATGTTTGGAGA+AGG | - | Chr1:75923234-75923253 | MsG0180004276.01.T01:intron | 40.0% |
| ! | GAGAGTCTTTTATTCAAGGC+AGG | - | Chr1:75922971-75922990 | MsG0180004276.01.T01:intron | 40.0% |
| ! | GGGAATAACAGCCTTATGTT+TGG | - | Chr1:75923228-75923247 | MsG0180004276.01.T01:intron | 40.0% |
| ! | TATACCAGTTTGGGATGAGA+AGG | - | Chr1:75922688-75922707 | MsG0180004276.01.T01:three_prime_UTR | 40.0% |
| AACATGAGGGGAGGTTAAGA+TGG | + | Chr1:75922905-75922924 | None:intergenic | 45.0% | |
| AACCTCCCCTCATGTTCTTT+AGG | - | Chr1:75922909-75922928 | MsG0180004276.01.T01:exon | 45.0% | |
| ACCCACCTTCTCCAAACATA+AGG | + | Chr1:75923242-75923261 | None:intergenic | 45.0% | |
| GCCTTATGTTTGGAGAAGGT+GGG | - | Chr1:75923238-75923257 | MsG0180004276.01.T01:intron | 45.0% | |
| TACCTAAAGAACATGAGGGG+AGG | + | Chr1:75922914-75922933 | None:intergenic | 45.0% | |
| ! | AGCCTTATGTTTGGAGAAGG+TGG | - | Chr1:75923237-75923256 | MsG0180004276.01.T01:intron | 45.0% |
| TGCTCAACCTTCAGAACCTG+TGG | - | Chr1:75922949-75922968 | MsG0180004276.01.T01:intron | 50.0% | |
| TTGGATGGCTGCTCTTCGTT+CGG | + | Chr1:75923049-75923068 | None:intergenic | 50.0% | |
| ! | ACCAGTTTGGGATGAGAAGG+AGG | - | Chr1:75922691-75922710 | MsG0180004276.01.T01:three_prime_UTR | 50.0% |
| ! | AGACTCTCCACAGGTTCTGA+AGG | + | Chr1:75922959-75922978 | None:intergenic | 50.0% |
| ! | CCAGTTTGGGATGAGAAGGA+GGG | - | Chr1:75922692-75922711 | MsG0180004276.01.T01:three_prime_UTR | 50.0% |
| ! | CTTCGTTCGGGGTATCAACA+GGG | + | Chr1:75923036-75923055 | None:intergenic | 50.0% |
| ! | TCTTCGTTCGGGGTATCAAC+AGG | + | Chr1:75923037-75923056 | None:intergenic | 50.0% |
| !! | AAACGGAAAGGTGGACTGTC+TGG | - | Chr1:75923004-75923023 | MsG0180004276.01.T01:intron | 50.0% |
| CCCTCCTTCTCATCCCAAAC+TGG | + | Chr1:75922695-75922714 | None:intergenic | 55.0% | |
| TGGATGGCTGCTCTTCGTTC+GGG | + | Chr1:75923048-75923067 | None:intergenic | 55.0% | |
| GGATGGCTGCTCTTCGTTCG+GGG | + | Chr1:75923047-75923066 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 75922641 | 75923499 | 75922641 | ID=MsG0180004276.01;Name=MsG0180004276.01 |
| Chr1 | mRNA | 75922641 | 75923499 | 75922641 | ID=MsG0180004276.01.T01;Parent=MsG0180004276.01;Name=MsG0180004276.01.T01;_AED=0.48;_eAED=0.55;_QI=0|0.66|0.75|1|0.33|0.5|4|276|105 |
| Chr1 | exon | 75922641 | 75922960 | 75922641 | ID=MsG0180004276.01.T01:exon:14723;Parent=MsG0180004276.01.T01 |
| Chr1 | exon | 75923055 | 75923209 | 75923055 | ID=MsG0180004276.01.T01:exon:14722;Parent=MsG0180004276.01.T01 |
| Chr1 | exon | 75923325 | 75923370 | 75923325 | ID=MsG0180004276.01.T01:exon:14721;Parent=MsG0180004276.01.T01 |
| Chr1 | exon | 75923427 | 75923499 | 75923427 | ID=MsG0180004276.01.T01:exon:14720;Parent=MsG0180004276.01.T01 |
| Chr1 | CDS | 75923427 | 75923499 | 75923427 | ID=MsG0180004276.01.T01:cds;Parent=MsG0180004276.01.T01 |
| Chr1 | CDS | 75923325 | 75923370 | 75923325 | ID=MsG0180004276.01.T01:cds;Parent=MsG0180004276.01.T01 |
| Chr1 | CDS | 75923055 | 75923209 | 75923055 | ID=MsG0180004276.01.T01:cds;Parent=MsG0180004276.01.T01 |
| Chr1 | CDS | 75922917 | 75922960 | 75922917 | ID=MsG0180004276.01.T01:cds;Parent=MsG0180004276.01.T01 |
| Chr1 | three_prime_UTR | 75922641 | 75922916 | 75922641 | ID=MsG0180004276.01.T01:three_prime_utr;Parent=MsG0180004276.01.T01 |
| Gene Sequence |
| Protein sequence |
