AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029940.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029940.01.T01 MTR_5g095290 90.196 306 23 4 1 301 1 304 0.0 553
MsG0580029940.01.T01 MTR_5g095260 88.889 306 28 3 1 301 1 305 0.0 542
MsG0580029940.01.T01 MTR_2g010530 74.468 282 68 1 20 301 20 297 1.60e-143 414
MsG0580029940.01.T01 MTR_5g095220 70.609 279 65 2 23 301 13 274 4.97e-133 386
MsG0580029940.01.T01 MTR_6g035115 66.447 304 95 2 1 301 1 300 2.26e-131 383
MsG0580029940.01.T01 MTR_5g094840 54.882 297 125 4 10 301 17 309 3.67e-103 311
MsG0580029940.01.T01 MTR_3g058250 48.837 301 144 4 7 300 6 303 1.63e-94 288
MsG0580029940.01.T01 MTR_3g058210 48.829 299 141 4 9 300 12 305 1.11e-93 286
MsG0580029940.01.T01 MTR_3g058390 47.508 301 148 4 7 300 6 303 1.50e-91 281
MsG0580029940.01.T01 MTR_0554s0020 47.333 300 147 3 7 300 10 304 1.96e-90 278
MsG0580029940.01.T01 MTR_3g058240 49.630 270 128 3 38 300 1 269 4.60e-90 276
MsG0580029940.01.T01 MTR_6g462640 49.158 297 140 4 11 300 11 303 4.82e-90 277
MsG0580029940.01.T01 MTR_3g057900 54.000 250 114 1 7 256 6 254 7.10e-90 276
MsG0580029940.01.T01 MTR_1g035140 47.697 304 146 6 1 296 1 299 2.04e-89 275
MsG0580029940.01.T01 MTR_3g057970 51.379 290 120 5 15 296 12 288 2.50e-89 275
MsG0580029940.01.T01 MTR_3g058060 46.980 298 152 1 9 300 9 306 5.86e-89 277
MsG0580029940.01.T01 MTR_1g442730 48.052 308 146 5 1 300 1 302 1.00e-88 274
MsG0580029940.01.T01 MTR_3g058220 47.195 303 143 5 6 300 10 303 1.74e-88 273
MsG0580029940.01.T01 MTR_3g058110 45.752 306 152 4 4 300 7 307 2.00e-88 273
MsG0580029940.01.T01 MTR_3g057980 47.099 293 138 4 12 296 11 294 5.05e-87 269
MsG0580029940.01.T01 MTR_1g035190 49.275 276 130 3 29 296 11 284 2.54e-86 267
MsG0580029940.01.T01 MTR_3g058000 47.826 276 135 3 33 300 33 307 7.36e-85 264
MsG0580029940.01.T01 MTR_3g058400 44.702 302 156 3 7 300 6 304 1.28e-83 261
MsG0580029940.01.T01 MTR_5g094540 46.382 304 148 6 3 300 8 302 1.79e-83 260
MsG0580029940.01.T01 MTR_5g094660 49.458 277 131 4 30 301 30 302 3.33e-83 259
MsG0580029940.01.T01 MTR_5g094570 45.902 305 150 5 3 301 8 303 3.53e-83 259
MsG0580029940.01.T01 MTR_5g094560 44.590 305 154 5 3 301 8 303 7.18e-83 258
MsG0580029940.01.T01 MTR_8g466180 42.763 304 155 4 8 300 8 303 2.87e-82 257
MsG0580029940.01.T01 MTR_0059s0170 44.554 303 155 5 5 300 8 304 3.80e-82 257
MsG0580029940.01.T01 MTR_5g094550 44.918 305 153 5 3 301 8 303 3.08e-81 254
MsG0580029940.01.T01 MTR_6g039630 45.882 255 134 1 8 262 8 258 8.47e-81 246
MsG0580029940.01.T01 MTR_5g094520 45.130 308 153 6 1 300 34 333 4.63e-80 252
MsG0580029940.01.T01 MTR_5g019010 45.614 285 140 5 29 301 25 306 1.22e-78 248
MsG0580029940.01.T01 MTR_5g073250 45.847 301 143 5 6 300 16 302 1.75e-78 247
MsG0580029940.01.T01 MTR_5g018990 44.928 276 137 3 38 301 35 307 2.06e-78 247
MsG0580029940.01.T01 MTR_4g133750 43.791 306 161 6 1 300 1 301 5.85e-76 241
MsG0580029940.01.T01 MTR_4g048580 44.108 297 156 5 8 300 12 302 6.22e-76 241
MsG0580029940.01.T01 MTR_3g057800 43.182 308 160 5 1 300 1 301 1.37e-75 239
MsG0580029940.01.T01 MTR_3g057860 43.046 302 155 6 9 300 10 304 5.41e-75 238
MsG0580029940.01.T01 MTR_5g073320 45.683 278 140 4 30 300 30 303 6.86e-75 238
MsG0580029940.01.T01 MTR_3g057910 45.850 253 123 3 34 275 34 283 5.42e-73 233
MsG0580029940.01.T01 MTR_6g034965 41.967 305 163 6 1 300 3 298 1.02e-71 229
MsG0580029940.01.T01 MTR_3g058230 48.918 231 113 3 74 300 1 230 2.94e-71 226
MsG0580029940.01.T01 MTR_5g018980 41.379 290 148 5 22 296 22 304 5.37e-71 228
MsG0580029940.01.T01 MTR_6g035100 43.103 290 156 5 15 300 14 298 1.54e-70 226
MsG0580029940.01.T01 MTR_5g073230 43.525 278 137 5 28 301 31 292 3.19e-67 218
MsG0580029940.01.T01 MTR_3g076530 37.954 303 170 6 5 300 14 305 1.95e-62 206
MsG0580029940.01.T01 MTR_5g094535 43.379 219 102 3 8 225 12 209 6.69e-59 188
MsG0580029940.01.T01 MTR_3g058380 43.805 226 116 3 83 300 1 223 4.85e-58 192
MsG0580029940.01.T01 MTR_5g094520 45.259 232 118 3 74 300 1 228 2.17e-56 188
MsG0580029940.01.T01 MTR_5g094460 45.000 220 91 3 16 233 7 198 2.70e-54 181
MsG0580029940.01.T01 MTR_3g076560 37.338 308 165 9 6 301 27 318 1.75e-53 182
MsG0580029940.01.T01 MTR_1g023730 35.640 289 161 6 35 301 29 314 3.80e-52 179
MsG0580029940.01.T01 MTR_1g023700 33.775 302 163 5 28 301 23 315 2.13e-51 177
MsG0580029940.01.T01 MTR_1g023720 33.446 296 172 5 28 301 22 314 3.43e-50 174
MsG0580029940.01.T01 MTR_4g104640 35.274 292 170 9 24 301 34 320 4.81e-50 173
MsG0580029940.01.T01 MTR_2g065360 37.815 238 140 4 33 264 2 237 4.39e-48 167
MsG0580029940.01.T01 MTR_5g094670 41.850 227 87 6 8 233 12 194 2.66e-47 160
MsG0580029940.01.T01 MTR_8g091690 35.019 257 153 4 12 264 10 256 1.19e-46 163
MsG0580029940.01.T01 MTR_4g089055 34.559 272 165 4 13 283 27 286 1.37e-46 164
MsG0580029940.01.T01 MTR_4g104550 32.857 280 176 5 30 301 20 295 1.98e-46 163
MsG0580029940.01.T01 MTR_4g104660 35.548 301 177 8 13 301 21 316 2.10e-46 163
MsG0580029940.01.T01 MTR_4g089020 32.566 304 186 6 5 300 3 295 2.52e-46 163
MsG0580029940.01.T01 MTR_5g070850 33.582 268 164 6 39 296 38 301 2.87e-46 163
MsG0580029940.01.T01 MTR_4g089030 32.581 310 184 8 5 300 21 319 7.03e-46 162
MsG0580029940.01.T01 MTR_4g026050 36.000 275 159 5 34 296 25 294 2.06e-44 158
MsG0580029940.01.T01 MTR_4g025950 35.018 277 166 6 33 298 24 297 2.66e-44 153
MsG0580029940.01.T01 MTR_0022s0290 32.177 317 187 7 4 300 10 318 6.63e-44 157
MsG0580029940.01.T01 MTR_4g104610 34.016 244 151 4 15 254 10 247 8.39e-44 156
MsG0580029940.01.T01 MTR_6g084770 31.908 304 187 8 6 296 6 302 2.47e-43 155
MsG0580029940.01.T01 MTR_5g045770 34.307 274 167 5 33 296 24 294 4.22e-43 154
MsG0580029940.01.T01 MTR_5g073240 53.623 138 59 2 12 148 60 193 4.25e-43 146
MsG0580029940.01.T01 MTR_4g025970 35.273 275 164 6 33 296 24 295 8.92e-43 153
MsG0580029940.01.T01 MTR_4g071710 32.616 279 162 7 39 296 38 311 1.10e-42 154
MsG0580029940.01.T01 MTR_5g070700 34.444 270 159 7 39 296 38 301 2.11e-42 152
MsG0580029940.01.T01 MTR_5g070710 31.884 276 176 6 32 301 30 299 4.46e-42 152
MsG0580029940.01.T01 MTR_5g470730 32.463 268 167 6 39 296 38 301 7.12e-42 150
MsG0580029940.01.T01 MTR_4g026070 34.182 275 168 4 32 296 23 294 8.89e-42 147
MsG0580029940.01.T01 MTR_3g076550 34.058 276 133 8 37 300 68 306 1.17e-41 150
MsG0580029940.01.T01 MTR_4g025980 33.955 268 163 6 39 296 31 294 2.74e-41 149
MsG0580029940.01.T01 MTR_4g089025 29.431 299 197 5 13 301 27 321 7.00e-41 149
MsG0580029940.01.T01 MTR_5g023680 34.572 269 163 4 38 296 5 270 8.78e-41 147
MsG0580029940.01.T01 MTR_3g025260 34.201 269 159 7 47 301 41 305 1.02e-40 148
MsG0580029940.01.T01 MTR_8g076290 31.159 276 173 8 39 300 36 308 3.58e-40 147
MsG0580029940.01.T01 MTR_5g070920 33.948 271 158 8 39 296 38 300 4.39e-40 146
MsG0580029940.01.T01 MTR_8g020940 34.646 254 151 6 37 277 35 286 6.38e-40 146
MsG0580029940.01.T01 MTR_7g012330 31.159 276 176 4 32 296 28 300 9.83e-40 145
MsG0580029940.01.T01 MTR_5g021390 28.664 307 197 7 2 296 15 311 1.01e-39 145
MsG0580029940.01.T01 MTR_8g020950 34.914 232 141 4 37 260 37 266 1.61e-39 145
MsG0580029940.01.T01 MTR_4g109470 33.835 266 160 7 47 300 40 301 3.02e-39 144
MsG0580029940.01.T01 MTR_3g020780 30.818 318 188 9 3 300 5 310 1.08e-38 142
MsG0580029940.01.T01 MTR_4g026200 34.173 278 168 6 30 296 21 294 1.93e-38 142
MsG0580029940.01.T01 MTR_5g070980 50.400 125 61 1 39 163 38 161 2.20e-38 135
MsG0580029940.01.T01 MTR_0181s0030 29.808 312 187 8 5 301 10 304 2.60e-38 141
MsG0580029940.01.T01 MTR_5g072980 32.841 271 167 5 38 296 33 300 3.67e-38 141
MsG0580029940.01.T01 MTR_5g072930 32.841 271 167 5 38 296 33 300 3.67e-38 141
MsG0580029940.01.T01 MTR_3g436390 31.597 288 160 9 33 300 31 301 7.12e-38 140
MsG0580029940.01.T01 MTR_7g092620 30.961 281 175 8 36 301 32 308 2.43e-37 139
MsG0580029940.01.T01 MTR_7g012860 31.915 282 178 4 26 296 21 299 2.81e-37 139
MsG0580029940.01.T01 MTR_0287s0060 31.915 282 178 4 26 296 21 299 2.81e-37 139
MsG0580029940.01.T01 MTR_5g016410 29.870 308 193 8 7 301 4 301 2.97e-37 139
MsG0580029940.01.T01 MTR_5g073020 32.971 276 170 5 38 301 33 305 6.26e-37 138
MsG0580029940.01.T01 MTR_5g070690 31.449 283 180 6 24 296 21 299 6.49e-37 138
MsG0580029940.01.T01 MTR_5g070800 31.449 283 180 6 24 296 21 299 6.49e-37 138
MsG0580029940.01.T01 MTR_8g104080 31.982 222 143 5 7 224 6 223 1.28e-36 132
MsG0580029940.01.T01 MTR_3g077460 35.448 268 139 6 36 301 5 240 1.62e-36 135
MsG0580029940.01.T01 MTR_4g094772 32.593 270 168 8 37 301 32 292 3.54e-36 135
MsG0580029940.01.T01 MTR_3g025230 35.448 268 155 7 47 300 41 304 1.33e-35 134
MsG0580029940.01.T01 MTR_3g024520 35.448 268 155 7 47 300 41 304 1.38e-35 134
MsG0580029940.01.T01 MTR_4g102310 31.835 267 164 5 25 280 31 290 2.12e-35 134
MsG0580029940.01.T01 MTR_0171s0020 29.393 313 190 9 6 301 12 310 4.82e-35 132
MsG0580029940.01.T01 MTR_3g057990 30.153 262 123 3 1 262 3 204 1.14e-34 125
MsG0580029940.01.T01 MTR_3g436540 30.258 271 179 5 38 300 40 308 6.70e-34 129
MsG0580029940.01.T01 MTR_4g471620 38.415 164 97 3 39 200 38 199 1.23e-33 122
MsG0580029940.01.T01 MTR_5g016440 31.494 308 182 9 1 296 1 291 1.70e-33 128
MsG0580029940.01.T01 MTR_7g087520 29.592 294 180 8 24 297 23 309 1.73e-33 128
MsG0580029940.01.T01 MTR_0171s0010 30.576 278 177 7 39 301 36 312 5.70e-33 127
MsG0580029940.01.T01 MTR_4g094775 28.571 308 189 9 7 301 12 301 7.30e-33 126
MsG0580029940.01.T01 MTR_8g020960 34.052 232 139 4 37 256 36 265 1.36e-32 126
MsG0580029940.01.T01 MTR_4g095050 31.560 282 170 7 37 301 30 305 3.49e-32 125
MsG0580029940.01.T01 MTR_4g133760 34.361 227 112 4 74 296 1 194 5.69e-32 122
MsG0580029940.01.T01 MTR_7g056103 32.616 279 168 9 38 301 33 306 1.52e-31 123
MsG0580029940.01.T01 MTR_4g062500 33.929 224 136 6 39 254 36 255 1.62e-31 123
MsG0580029940.01.T01 MTR_4g035330 31.111 270 172 8 37 301 29 289 4.04e-31 122
MsG0580029940.01.T01 MTR_7g027960 37.952 166 98 4 33 195 26 189 9.78e-31 121
MsG0580029940.01.T01 MTR_7g028020 36.082 194 109 5 5 195 8 189 4.02e-30 119
MsG0580029940.01.T01 MTR_5g007460 30.566 265 170 5 32 283 3 266 5.95e-30 118
MsG0580029940.01.T01 MTR_4g062510 32.857 210 132 5 53 255 51 258 1.07e-29 118
MsG0580029940.01.T01 MTR_1g107305 37.419 155 91 3 53 202 52 205 3.68e-29 114
MsG0580029940.01.T01 MTR_8g469300 30.337 267 161 8 53 301 49 308 4.42e-29 116
MsG0580029940.01.T01 MTR_4g104540 29.536 237 155 4 74 301 1 234 5.86e-29 115
MsG0580029940.01.T01 MTR_5g007450 29.434 265 173 6 8 265 9 266 9.54e-29 115
MsG0580029940.01.T01 MTR_5g007550 29.545 264 172 6 9 265 10 266 2.38e-28 114
MsG0580029940.01.T01 MTR_4g088425 30.396 227 152 3 35 256 36 261 2.93e-28 114
MsG0580029940.01.T01 MTR_1g107295 31.905 210 134 5 53 255 52 259 6.70e-28 113
MsG0580029940.01.T01 MTR_5g018480 28.832 274 170 8 25 277 29 298 1.48e-27 109
MsG0580029940.01.T01 MTR_1g097240 25.714 280 195 5 33 301 22 299 1.52e-27 112
MsG0580029940.01.T01 MTR_4g088400 29.004 231 143 7 35 247 42 269 1.66e-27 112
MsG0580029940.01.T01 MTR_6g008500 28.846 260 148 7 35 260 34 290 3.06e-27 111
MsG0580029940.01.T01 MTR_2g437840 28.873 284 176 6 7 276 10 281 5.00e-27 110
MsG0580029940.01.T01 MTR_7g075390 32.663 199 126 3 5 201 6 198 1.78e-26 108
MsG0580029940.01.T01 MTR_1g031700 32.353 204 125 3 35 226 31 233 4.22e-26 107
MsG0580029940.01.T01 MTR_0608s0010 35.802 162 101 2 35 194 31 191 6.28e-26 105
MsG0580029940.01.T01 MTR_4g088415 27.778 252 159 8 39 271 44 291 8.59e-26 105
MsG0580029940.01.T01 MTR_7g092600 30.619 307 195 8 5 301 9 307 8.75e-26 107
MsG0580029940.01.T01 MTR_5g094790 37.374 198 88 6 96 293 1 162 8.83e-26 102
MsG0580029940.01.T01 MTR_4g102280 29.487 234 150 4 60 280 65 296 1.21e-25 106
MsG0580029940.01.T01 MTR_7g075610 30.258 271 167 8 26 280 24 288 4.51e-25 105
MsG0580029940.01.T01 MTR_8g012590 26.415 265 184 5 25 281 24 285 6.34e-25 104
MsG0580029940.01.T01 MTR_2g450040 28.859 298 173 12 30 301 29 313 7.29e-25 104
MsG0580029940.01.T01 MTR_1g103670 29.365 252 163 4 38 277 34 282 8.34e-25 104
MsG0580029940.01.T01 MTR_5g075450 26.990 289 181 7 22 292 28 304 9.99e-25 103
MsG0580029940.01.T01 MTR_6g008620 27.000 300 185 11 29 301 34 326 1.21e-24 103
MsG0580029940.01.T01 MTR_8g012585 30.660 212 132 5 66 263 1 211 1.43e-24 103
MsG0580029940.01.T01 MTR_6g022450 26.103 272 180 7 9 260 9 279 1.78e-24 103
MsG0580029940.01.T01 MTR_4g077210 28.030 264 169 9 53 301 49 306 2.66e-24 102
MsG0580029940.01.T01 MTR_8g046210 34.591 159 103 1 8 166 11 168 8.05e-24 101
MsG0580029940.01.T01 MTR_4g062530 34.211 152 94 4 47 195 44 192 1.29e-23 100
MsG0580029940.01.T01 MTR_8g046240 37.013 154 94 2 36 189 39 189 3.18e-23 99.8
MsG0580029940.01.T01 MTR_8g036185 27.338 278 169 9 48 301 44 312 3.46e-23 99.8
MsG0580029940.01.T01 MTR_7g103450 27.064 218 147 4 34 241 42 257 3.63e-23 99.8
MsG0580029940.01.T01 MTR_8g468780 29.719 249 144 10 74 301 1 239 5.05e-23 98.6
MsG0580029940.01.T01 MTR_1g103680 27.397 292 182 7 3 277 5 283 8.56e-23 98.6
MsG0580029940.01.T01 MTR_2g073420 30.412 194 128 4 3 193 11 200 1.38e-22 97.8
MsG0580029940.01.T01 MTR_4g018800 26.480 321 200 12 9 301 14 326 2.32e-22 97.4
MsG0580029940.01.T01 MTR_0638s0020 27.037 270 147 7 33 296 2 227 2.46e-22 96.7
MsG0580029940.01.T01 MTR_6g008600 36.842 133 81 2 33 164 37 167 3.71e-22 96.7
MsG0580029940.01.T01 MTR_3g057880 52.874 87 36 2 15 101 42 123 4.42e-22 89.7
MsG0580029940.01.T01 MTR_2g437880 27.206 272 169 10 50 301 44 306 6.16e-22 95.9
MsG0580029940.01.T01 MTR_2g073440 30.818 159 107 2 37 193 32 189 1.42e-21 94.7
MsG0580029940.01.T01 MTR_4g078110 34.756 164 104 2 32 195 22 182 5.31e-21 93.2
MsG0580029940.01.T01 MTR_5g070685 44.828 87 47 1 31 117 31 116 6.81e-21 86.3
MsG0580029940.01.T01 MTR_6g008530 36.800 125 76 2 41 164 46 168 7.10e-21 92.8
MsG0580029940.01.T01 MTR_8g073960 26.733 303 186 11 7 281 14 308 9.00e-21 92.8
MsG0580029940.01.T01 MTR_3g467220 26.452 310 195 10 11 296 18 318 1.05e-20 92.4
MsG0580029940.01.T01 MTR_1g111240 25.856 263 176 6 47 292 74 334 1.18e-20 92.4
MsG0580029940.01.T01 MTR_6g008640 27.626 257 164 7 25 262 28 281 1.61e-20 92.0
MsG0580029940.01.T01 MTR_1g055325 26.562 256 167 5 37 277 53 302 1.66e-20 91.7
MsG0580029940.01.T01 MTR_0171s0030 28.634 227 141 7 91 301 1 222 1.76e-20 91.3
MsG0580029940.01.T01 MTR_6g042610 26.165 279 173 10 9 266 13 279 2.35e-20 91.3
MsG0580029940.01.T01 MTR_8g073950 26.510 298 184 10 12 281 14 304 3.61e-20 90.9
MsG0580029940.01.T01 MTR_1g037370 33.544 158 102 2 38 193 31 187 5.16e-20 90.1
MsG0580029940.01.T01 MTR_6g008430 25.869 259 168 8 12 252 15 267 7.07e-20 90.1
MsG0580029940.01.T01 MTR_3g465300 27.103 321 183 14 7 294 16 318 3.23e-19 88.2
MsG0580029940.01.T01 MTR_3g467290 32.298 161 101 2 11 166 23 180 8.14e-19 87.0
MsG0580029940.01.T01 MTR_0155s0010 37.069 116 72 1 41 156 20 134 1.08e-18 81.3
MsG0580029940.01.T01 MTR_6g042540 26.378 254 164 8 30 263 26 276 1.55e-18 85.9
MsG0580029940.01.T01 MTR_6g008650 25.547 274 176 8 9 262 17 282 1.72e-18 85.9
MsG0580029940.01.T01 MTR_7g075540 23.529 272 180 6 55 301 50 318 3.61e-18 84.7
MsG0580029940.01.T01 MTR_1g116890 24.373 279 193 7 37 300 33 308 8.86e-18 84.0
MsG0580029940.01.T01 MTR_7g075600 26.180 233 159 5 55 274 50 282 1.37e-17 83.2
MsG0580029940.01.T01 MTR_4g088160 31.056 161 106 4 39 195 35 194 2.85e-17 82.4
MsG0580029940.01.T01 MTR_6g084910 34.454 119 69 3 117 231 3 116 4.98e-17 76.3
MsG0580029940.01.T01 MTR_4g088195 29.814 161 108 4 39 195 35 194 3.46e-16 79.0
MsG0580029940.01.T01 MTR_8g091680 28.488 172 98 4 55 220 44 196 5.20e-16 78.6
MsG0580029940.01.T01 MTR_4g088170 29.814 161 108 4 39 195 35 194 5.46e-16 78.6
MsG0580029940.01.T01 MTR_3g467200 25.704 284 168 12 47 301 59 328 1.09e-15 77.4
MsG0580029940.01.T01 MTR_3g014880 24.000 275 181 7 8 262 16 282 2.10e-15 76.6
MsG0580029940.01.T01 MTR_1g091023 31.746 126 85 1 38 163 34 158 3.48e-15 75.9
MsG0580029940.01.T01 MTR_8g076372 24.335 263 166 10 46 281 52 308 1.57e-14 73.9
MsG0580029940.01.T01 MTR_8g076390 24.138 261 169 8 46 281 52 308 1.61e-14 73.9
MsG0580029940.01.T01 MTR_7g075580 33.613 119 78 1 49 167 45 162 1.69e-14 73.9
MsG0580029940.01.T01 MTR_5g034900 29.480 173 115 4 36 201 29 201 1.85e-14 73.9
MsG0580029940.01.T01 MTR_1g091010 30.952 126 86 1 38 163 33 157 2.04e-14 73.6
MsG0580029940.01.T01 MTR_3g058150 53.571 56 26 0 74 129 1 56 3.95e-14 66.2
MsG0580029940.01.T01 MTR_8g027040 34.127 126 78 3 40 163 86 208 7.10e-14 72.0
MsG0580029940.01.T01 MTR_8g063280 26.522 230 151 5 1 224 1 218 1.05e-13 71.6
MsG0580029940.01.T01 MTR_1g492820 26.347 167 113 4 6 169 20 179 6.76e-13 69.3
MsG0580029940.01.T01 MTR_1g091003 23.755 261 176 6 38 283 34 286 7.41e-13 68.9
MsG0580029940.01.T01 MTR_2g010300 25.641 273 189 7 8 270 4 272 9.22e-13 68.6
MsG0580029940.01.T01 MTR_2g010250 27.586 203 132 5 8 201 4 200 2.32e-12 67.4
MsG0580029940.01.T01 MTR_2g073480 27.869 122 86 1 74 193 1 122 2.95e-12 67.0
MsG0580029940.01.T01 MTR_4g131830 28.082 146 102 3 25 167 20 165 4.62e-12 66.6
MsG0580029940.01.T01 MTR_8g080520 31.496 127 77 5 41 163 70 190 6.77e-12 66.2
MsG0580029940.01.T01 MTR_5g056720 31.858 113 75 1 66 176 24 136 8.12e-12 65.9
MsG0580029940.01.T01 MTR_5g045250 25.275 273 169 12 32 283 54 312 2.66e-11 64.3
MsG0580029940.01.T01 MTR_5g070830 27.807 187 118 6 122 296 230 411 4.52e-11 63.9
MsG0580029940.01.T01 MTR_8g098565 25.749 167 119 4 63 224 59 225 6.19e-11 63.2
MsG0580029940.01.T01 MTR_6g084760 32.184 87 57 1 115 199 1 87 9.82e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029940.01.T01 AT1G13110 36.306 314 170 9 9 301 1 305 1.05e-51 177
MsG0580029940.01.T01 AT3G48310 34.866 261 166 2 36 296 30 286 8.02e-50 172
MsG0580029940.01.T01 AT1G13080 37.234 282 164 5 32 301 23 303 1.05e-49 172
MsG0580029940.01.T01 AT2G30770 35.401 274 166 6 34 301 29 297 1.13e-49 172
MsG0580029940.01.T01 AT3G48290 34.296 277 176 3 25 301 22 292 1.12e-48 169
MsG0580029940.01.T01 AT4G13310 34.783 276 162 7 37 301 31 299 1.76e-48 166
MsG0580029940.01.T01 AT3G48320 33.784 296 186 3 1 296 1 286 1.81e-48 169
MsG0580029940.01.T01 AT3G48290 34.317 271 174 2 28 298 23 289 5.04e-48 168
MsG0580029940.01.T01 AT4G13310 34.783 276 162 7 37 301 31 299 1.18e-47 166
MsG0580029940.01.T01 AT4G13290 35.985 264 152 7 28 280 25 282 2.66e-47 165
MsG0580029940.01.T01 AT5G25120 36.059 269 164 5 34 296 25 291 4.25e-47 165
MsG0580029940.01.T01 AT1G11610 33.579 271 169 6 37 301 32 297 9.52e-47 164
MsG0580029940.01.T01 AT1G11610 33.579 271 169 6 37 301 32 297 1.22e-46 164
MsG0580029940.01.T01 AT1G13090 34.074 270 168 4 38 298 28 296 2.78e-46 158
MsG0580029940.01.T01 AT3G26320 35.897 273 161 7 39 301 32 300 6.98e-46 162
MsG0580029940.01.T01 AT1G13090 34.432 273 169 4 38 301 28 299 1.49e-45 160
MsG0580029940.01.T01 AT5G24950 32.000 275 171 7 36 301 30 297 3.03e-45 160
MsG0580029940.01.T01 AT3G44250 35.252 278 168 6 34 301 24 299 5.29e-45 159
MsG0580029940.01.T01 AT5G07990 33.876 307 180 11 7 300 4 300 5.53e-45 160
MsG0580029940.01.T01 AT3G48270 32.609 276 179 3 26 301 22 290 6.74e-45 159
MsG0580029940.01.T01 AT3G26830 33.550 307 182 8 6 301 4 299 1.12e-44 158
MsG0580029940.01.T01 AT5G57260 36.029 272 163 6 39 301 31 300 1.60e-44 158
MsG0580029940.01.T01 AT5G25140 34.722 288 152 9 34 301 25 296 1.61e-44 158
MsG0580029940.01.T01 AT5G25130 35.165 273 169 5 34 300 25 295 3.50e-44 157
MsG0580029940.01.T01 AT2G30750 34.686 271 166 6 37 301 32 297 5.26e-44 157
MsG0580029940.01.T01 AT4G31500 30.952 294 191 4 12 296 3 293 1.29e-43 155
MsG0580029940.01.T01 AT2G24180 36.691 278 157 7 37 301 35 306 1.40e-43 155
MsG0580029940.01.T01 AT3G26280 33.929 280 170 7 33 300 27 303 1.86e-43 155
MsG0580029940.01.T01 AT3G26310 32.787 305 186 9 7 301 4 299 2.18e-43 155
MsG0580029940.01.T01 AT3G26280 33.929 280 170 7 33 300 44 320 2.25e-43 155
MsG0580029940.01.T01 AT2G02580 34.426 305 182 8 7 301 4 300 2.44e-43 155
MsG0580029940.01.T01 AT3G48280 32.576 264 173 3 39 301 31 290 4.73e-43 154
MsG0580029940.01.T01 AT5G25180 32.107 299 184 7 5 296 5 291 6.79e-43 154
MsG0580029940.01.T01 AT3G26300 33.882 304 185 8 7 301 4 300 2.09e-42 152
MsG0580029940.01.T01 AT3G48300 32.824 262 172 2 40 301 31 288 1.14e-41 150
MsG0580029940.01.T01 AT3G48300 32.824 262 172 2 40 301 33 290 1.18e-41 150
MsG0580029940.01.T01 AT5G24960 34.182 275 163 9 37 301 32 298 3.10e-41 147
MsG0580029940.01.T01 AT4G13770 29.153 295 191 5 11 296 9 294 4.46e-41 149
MsG0580029940.01.T01 AT4G36220 31.522 276 154 6 46 296 48 313 5.76e-41 149
MsG0580029940.01.T01 AT3G26170 33.333 279 168 8 37 301 29 303 7.37e-41 148
MsG0580029940.01.T01 AT3G26330 33.700 273 167 7 39 301 32 300 9.08e-41 148
MsG0580029940.01.T01 AT5G24960 33.455 275 165 8 37 301 32 298 1.18e-40 148
MsG0580029940.01.T01 AT3G26220 34.286 315 172 10 5 301 6 303 1.57e-40 147
MsG0580029940.01.T01 AT3G26190 35.125 279 168 9 34 301 24 300 2.63e-40 147
MsG0580029940.01.T01 AT3G26270 33.333 285 167 7 33 301 27 304 3.09e-40 147
MsG0580029940.01.T01 AT3G26180 33.214 280 167 9 37 301 29 303 3.50e-40 146
MsG0580029940.01.T01 AT3G26210 32.830 265 166 5 47 301 40 302 5.82e-40 146
MsG0580029940.01.T01 AT3G53280 32.975 279 172 7 34 301 24 298 6.93e-40 145
MsG0580029940.01.T01 AT4G20240 31.746 252 165 4 34 279 29 279 1.37e-38 140
MsG0580029940.01.T01 AT5G06900 32.847 274 168 7 38 300 34 302 2.18e-38 142
MsG0580029940.01.T01 AT4G20240 31.746 252 165 4 34 279 29 279 3.83e-38 140
MsG0580029940.01.T01 AT5G42590 33.214 280 162 9 36 301 30 298 1.11e-37 140
MsG0580029940.01.T01 AT3G26200 33.571 280 171 8 34 301 24 300 2.21e-37 139
MsG0580029940.01.T01 AT3G26160 31.769 277 175 7 37 301 29 303 3.65e-37 138
MsG0580029940.01.T01 AT3G26290 32.168 286 179 8 25 301 21 300 2.68e-36 136
MsG0580029940.01.T01 AT3G26290 32.168 286 179 8 25 301 34 313 2.73e-36 136
MsG0580029940.01.T01 AT3G26150 30.820 305 187 9 11 301 9 303 3.10e-36 136
MsG0580029940.01.T01 AT5G04330 30.403 273 171 7 39 296 33 301 6.82e-35 132
MsG0580029940.01.T01 AT1G13100 30.712 267 169 6 47 301 37 299 4.20e-34 130
MsG0580029940.01.T01 AT3G26230 32.026 306 189 7 9 301 1 300 6.65e-34 129
MsG0580029940.01.T01 AT4G12300 31.636 275 166 8 37 296 41 308 4.00e-33 127
MsG0580029940.01.T01 AT3G53300 34.000 250 149 8 38 274 28 274 5.02e-32 124
MsG0580029940.01.T01 AT5G67310 30.000 310 189 13 4 301 17 310 5.69e-32 124
MsG0580029940.01.T01 AT4G37410 30.952 252 158 9 38 277 30 277 2.53e-31 122
MsG0580029940.01.T01 AT4G22710 30.258 271 168 4 45 301 60 323 4.58e-31 122
MsG0580029940.01.T01 AT5G57220 30.216 278 181 7 8 277 3 275 5.43e-31 121
MsG0580029940.01.T01 AT4G22690 29.677 310 190 6 10 301 55 354 1.91e-30 120
MsG0580029940.01.T01 AT4G20235 29.130 230 137 6 32 256 25 233 7.41e-30 116
MsG0580029940.01.T01 AT5G10610 30.000 310 194 11 1 300 1 297 9.60e-30 118
MsG0580029940.01.T01 AT4G12320 28.000 275 178 7 37 296 41 310 2.20e-29 117
MsG0580029940.01.T01 AT4G37320 27.419 310 190 10 6 301 11 299 4.91e-29 116
MsG0580029940.01.T01 AT5G10600 28.846 312 194 11 1 300 18 313 5.05e-29 116
MsG0580029940.01.T01 AT4G37340 30.556 288 167 10 6 276 8 279 6.10e-29 115
MsG0580029940.01.T01 AT4G37430 27.817 284 178 9 11 276 5 279 2.20e-28 114
MsG0580029940.01.T01 AT5G44620 27.925 265 179 5 47 301 55 317 4.82e-28 113
MsG0580029940.01.T01 AT5G06905 28.929 280 175 8 37 301 30 300 1.06e-27 112
MsG0580029940.01.T01 AT2G42250 28.169 284 189 8 28 301 31 309 2.04e-26 108
MsG0580029940.01.T01 AT4G31970 25.552 317 198 9 5 295 6 310 2.58e-26 108
MsG0580029940.01.T01 AT1G01280 26.866 268 173 6 47 297 41 302 7.95e-26 107
MsG0580029940.01.T01 AT5G36220 28.276 290 184 8 2 275 3 284 2.69e-25 105
MsG0580029940.01.T01 AT2G45560 31.068 206 132 5 35 231 35 239 4.15e-25 101
MsG0580029940.01.T01 AT2G45560 28.897 263 166 8 35 279 35 294 5.69e-25 102
MsG0580029940.01.T01 AT4G37370 27.365 296 192 8 1 285 1 284 1.11e-24 103
MsG0580029940.01.T01 AT2G45560 29.286 280 175 9 35 294 35 311 1.24e-24 103
MsG0580029940.01.T01 AT4G12330 25.651 269 172 8 54 301 55 316 1.38e-24 103
MsG0580029940.01.T01 AT4G37330 27.536 276 180 8 37 301 30 296 8.59e-24 101
MsG0580029940.01.T01 AT3G52970 26.238 202 141 2 36 229 34 235 1.03e-23 101
MsG0580029940.01.T01 AT4G37400 25.641 234 165 5 52 277 43 275 1.60e-23 100
MsG0580029940.01.T01 AT3G20940 23.843 281 202 4 25 296 29 306 1.81e-23 100
MsG0580029940.01.T01 AT4G37360 29.167 264 159 9 6 255 8 257 2.85e-23 99.8
MsG0580029940.01.T01 AT2G23190 26.582 316 200 11 1 301 45 343 5.96e-23 99.0
MsG0580029940.01.T01 AT3G25180 29.707 239 157 5 35 264 36 272 6.75e-23 97.8
MsG0580029940.01.T01 AT2G40890 28.155 206 133 3 38 229 27 231 1.25e-22 98.2
MsG0580029940.01.T01 AT5G35715 29.707 239 156 6 74 301 1 238 1.43e-22 97.4
MsG0580029940.01.T01 AT3G20950 27.053 207 139 4 1 200 9 210 2.26e-22 97.4
MsG0580029940.01.T01 AT3G25180 29.707 239 157 5 35 264 36 272 2.40e-22 97.1
MsG0580029940.01.T01 AT3G20110 31.720 186 124 2 11 194 13 197 3.23e-22 96.7
MsG0580029940.01.T01 AT4G37310 28.346 254 164 8 37 273 29 281 4.76e-22 96.3
MsG0580029940.01.T01 AT1G33720 25.949 316 201 10 5 301 9 310 1.06e-21 95.5
MsG0580029940.01.T01 AT3G52970 30.534 131 91 0 36 166 34 164 1.32e-21 95.1
MsG0580029940.01.T01 AT3G20090 32.432 148 98 1 49 194 54 201 4.07e-21 93.6
MsG0580029940.01.T01 AT4G31940 24.917 301 191 9 5 278 6 298 4.23e-21 93.6
MsG0580029940.01.T01 AT1G74550 34.146 164 98 4 36 194 25 183 4.43e-21 93.6
MsG0580029940.01.T01 AT2G23220 25.806 279 184 9 37 301 45 314 5.86e-21 93.2
MsG0580029940.01.T01 AT2G45550 27.619 315 191 11 5 294 9 311 6.49e-21 93.2
MsG0580029940.01.T01 AT4G12310 26.966 267 164 9 54 296 53 312 9.18e-21 92.8
MsG0580029940.01.T01 AT3G61040 28.058 278 172 8 39 301 34 298 1.51e-20 91.3
MsG0580029940.01.T01 AT4G15360 26.452 310 209 8 3 301 9 310 1.97e-20 91.7
MsG0580029940.01.T01 AT5G05260 31.188 202 120 7 9 194 8 206 2.39e-20 91.3
MsG0580029940.01.T01 AT5G05260 31.188 202 120 7 9 194 8 206 3.07e-20 90.9
MsG0580029940.01.T01 AT1G58260 27.273 319 192 11 11 301 13 319 3.91e-20 90.9
MsG0580029940.01.T01 AT3G61040 28.058 278 172 8 39 301 34 298 4.45e-20 90.5
MsG0580029940.01.T01 AT2G25160 26.165 279 181 8 7 265 3 276 5.68e-20 89.7
MsG0580029940.01.T01 AT3G53290 29.358 218 142 6 92 298 11 227 7.49e-20 89.4
MsG0580029940.01.T01 AT2G25160 26.182 275 178 8 11 265 7 276 8.04e-20 89.7
MsG0580029940.01.T01 AT3G53305 42.063 126 69 2 74 196 1 125 1.30e-19 87.8
MsG0580029940.01.T01 AT1G50520 27.341 267 177 7 47 301 52 313 2.21e-19 88.6
MsG0580029940.01.T01 AT4G15330 33.594 128 85 0 37 164 37 164 3.72e-19 87.8
MsG0580029940.01.T01 AT3G20130 23.462 260 190 4 49 301 53 310 4.91e-19 87.4
MsG0580029940.01.T01 AT3G28740 29.181 281 172 11 37 301 38 307 6.68e-19 87.0
MsG0580029940.01.T01 AT2G45570 29.947 187 120 6 47 224 47 231 2.26e-18 85.5
MsG0580029940.01.T01 AT3G20140 27.841 176 121 2 25 196 29 202 2.84e-18 85.1
MsG0580029940.01.T01 AT2G14100 25.095 263 182 7 49 301 54 311 5.72e-18 84.3
MsG0580029940.01.T01 AT5G42580 25.506 247 169 5 59 301 60 295 8.02e-18 84.0
MsG0580029940.01.T01 AT2G46660 31.169 154 101 3 30 181 62 212 1.04e-17 83.6
MsG0580029940.01.T01 AT1G79370 27.778 198 125 4 9 194 16 207 2.59e-17 82.4
MsG0580029940.01.T01 AT1G74540 33.333 144 90 3 36 179 25 162 2.80e-17 82.4
MsG0580029940.01.T01 AT3G32047 23.664 262 186 7 49 301 53 309 3.78e-17 82.0
MsG0580029940.01.T01 AT2G27000 29.747 158 99 3 49 199 50 202 7.63e-17 80.9
MsG0580029940.01.T01 AT2G22330 32.075 159 96 4 13 166 37 188 1.13e-16 80.5
MsG0580029940.01.T01 AT2G22330 32.075 159 96 4 13 166 60 211 1.22e-16 80.5
MsG0580029940.01.T01 AT4G39950 31.902 163 103 2 9 166 67 226 1.48e-16 80.5
MsG0580029940.01.T01 AT3G26180 43.023 86 48 1 37 122 29 113 1.51e-16 79.7
MsG0580029940.01.T01 AT4G39950 31.902 163 103 2 9 166 27 186 1.58e-16 80.1
MsG0580029940.01.T01 AT1G16410 24.227 194 143 2 5 194 12 205 1.70e-16 79.7
MsG0580029940.01.T01 AT2G05180 29.530 149 101 2 49 194 52 199 2.19e-16 79.3
MsG0580029940.01.T01 AT1G16410 24.227 194 143 2 5 194 12 205 2.39e-16 79.7
MsG0580029940.01.T01 AT5G35917 30.636 173 102 5 37 194 41 210 4.18e-16 79.0
MsG0580029940.01.T01 AT1G16400 26.829 205 136 4 1 194 3 204 9.36e-16 77.8
MsG0580029940.01.T01 AT2G45580 32.215 149 98 2 48 194 48 195 1.11e-15 77.4
MsG0580029940.01.T01 AT2G45580 32.432 148 97 2 48 193 48 194 1.19e-15 77.4
MsG0580029940.01.T01 AT2G30490 29.825 171 110 3 57 218 52 221 3.77e-15 75.9
MsG0580029940.01.T01 AT1G50560 23.864 264 187 5 49 301 54 314 1.05e-14 74.7
MsG0580029940.01.T01 AT5G47990 24.074 270 168 8 53 300 56 310 1.27e-14 74.3
MsG0580029940.01.T01 AT5G04630 29.341 167 105 5 5 166 11 169 1.86e-14 73.9
MsG0580029940.01.T01 AT1G11600 26.946 167 116 3 11 171 8 174 1.96e-14 73.9
MsG0580029940.01.T01 AT4G31950 22.924 301 185 10 5 278 6 286 3.92e-14 72.8
MsG0580029940.01.T01 AT5G09970 23.929 280 180 9 40 300 71 336 4.08e-14 72.8
MsG0580029940.01.T01 AT3G61880 32.308 130 83 3 40 167 68 194 4.61e-14 72.8
MsG0580029940.01.T01 AT3G61880 32.308 130 83 3 40 167 68 194 5.62e-14 72.4
MsG0580029940.01.T01 AT3G03470 25.984 254 173 8 34 275 27 277 6.81e-14 72.4
MsG0580029940.01.T01 AT1G13710 32.308 130 76 5 40 166 55 175 8.41e-14 72.0
MsG0580029940.01.T01 AT3G20100 22.140 271 185 7 47 301 50 310 8.68e-14 72.0
MsG0580029940.01.T01 AT3G10560 31.159 138 92 2 32 166 40 177 8.69e-14 72.0
MsG0580029940.01.T01 AT4G15350 20.623 257 192 4 54 301 51 304 2.05e-13 70.9
MsG0580029940.01.T01 AT3G20960 28.571 133 93 1 64 194 67 199 5.53e-13 69.7
MsG0580029940.01.T01 AT3G20080 27.273 165 118 1 37 199 41 205 2.24e-12 67.8
MsG0580029940.01.T01 AT3G20080 27.273 165 118 1 37 199 41 205 2.24e-12 67.8
MsG0580029940.01.T01 AT1G64950 26.500 200 139 5 32 224 26 224 2.80e-12 67.4
MsG0580029940.01.T01 AT3G20120 28.947 114 81 0 49 162 52 165 4.66e-12 66.6
MsG0580029940.01.T01 AT1G64940 27.000 200 139 5 7 201 3 200 5.73e-12 66.6
MsG0580029940.01.T01 AT1G01190 26.974 152 100 4 32 178 72 217 6.42e-12 66.2
MsG0580029940.01.T01 AT1G01190 26.974 152 100 4 32 178 67 212 7.53e-12 66.2
MsG0580029940.01.T01 AT1G28430 20.690 261 196 4 49 301 51 308 1.79e-11 65.1
MsG0580029940.01.T01 AT5G25900 23.986 296 196 9 5 273 3 296 9.11e-11 62.8

Find 58 sgRNAs with CRISPR-Local

Find 74 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTCTTTGGCAATTTCTT+TGG 0.197169 5:-104264738 None:intergenic
CTTATGGCTCTCCATCCTTT+TGG 0.197752 5:+104264493 MsG0580029940.01.T01:CDS
TGGAGAATAATTTCTTCTTA+TGG 0.238457 5:+104264477 MsG0580029940.01.T01:CDS
GGTCTAGAAATTGTTTCTTA+TGG 0.245150 5:+104264806 MsG0580029940.01.T01:CDS
TGACATATAACATCACTTCT+AGG 0.251663 5:+104265023 MsG0580029940.01.T01:CDS
CCTTGGAAGCTACCAATTAT+TGG 0.255776 5:+104264599 MsG0580029940.01.T01:CDS
CAACATTAAAGCCGTTATTC+AGG 0.287595 5:+104265345 MsG0580029940.01.T01:CDS
TGAATCGCTTTCCCACATTT+AGG 0.302153 5:-104264529 None:intergenic
ATCACTTCTAGGGCATCTTT+TGG 0.321928 5:+104265034 MsG0580029940.01.T01:CDS
TGATGTATGCTTCCAATAAT+TGG 0.349317 5:-104264611 None:intergenic
CCTCTTCCTCTCGAATTGAT+TGG 0.364470 5:-104264928 None:intergenic
ATTGCATAGAAGTGGTGATA+TGG 0.392529 5:+104265198 MsG0580029940.01.T01:CDS
CCACAAAGACCTCGTTCTCT+TGG 0.396955 5:+104264785 MsG0580029940.01.T01:CDS
CATTGGTTACATGTTATTAG+TGG 0.398919 5:+104265154 MsG0580029940.01.T01:CDS
ATGTTTGAGATTCAAAAGAT+AGG 0.408966 5:-104265281 None:intergenic
CCAAGAGAACGAGGTCTTTG+TGG 0.423526 5:-104264785 None:intergenic
TAATAACATGTAACCAATGC+TGG 0.433675 5:-104265150 None:intergenic
ACATGATGGCTCTTCTAATC+CGG 0.439718 5:+104265300 MsG0580029940.01.T01:CDS
CAAATCTTCCTCCAGGTCCT+TGG 0.441494 5:+104264582 MsG0580029940.01.T01:CDS
CCAATAATTGGTAGCTTCCA+AGG 0.448275 5:-104264599 None:intergenic
CCTCTCATGCACCTAAAACT+TGG 0.455822 5:+104264689 MsG0580029940.01.T01:CDS
TTTCACCCTATGGAGAGTAT+TGG 0.472828 5:+104264846 MsG0580029940.01.T01:CDS
CACCCTATGGAGAGTATTGG+AGG 0.488528 5:+104264849 MsG0580029940.01.T01:CDS
GGGACAATTCTCTCATTCTG+TGG 0.501610 5:-104264655 None:intergenic
CCAATCAATTCGAGAGGAAG+AGG 0.506173 5:+104264928 MsG0580029940.01.T01:CDS
ATTTGTTTCCCTCCCAGCAT+TGG 0.507150 5:+104265137 MsG0580029940.01.T01:CDS
CTCTCATTCTGTGGTGAGGT+AGG 0.509358 5:-104264646 None:intergenic
TCTCATTCTGTGGTGAGGTA+GGG 0.510001 5:-104264645 None:intergenic
CTGCCTCCAATACTCTCCAT+AGG 0.511266 5:-104264852 None:intergenic
GACATATAACATCACTTCTA+GGG 0.515654 5:+104265024 MsG0580029940.01.T01:CDS
CAAAATAAGACCCAAAAGGA+TGG 0.516486 5:-104264504 None:intergenic
TTCCAAAGAAATTGCCAAAG+AGG 0.517575 5:+104264736 MsG0580029940.01.T01:CDS
AGCATATATCTTGTTCATGA+AGG 0.522051 5:+104265078 MsG0580029940.01.T01:CDS
AGGACCTGGAGGAAGATTTG+AGG 0.539856 5:-104264579 None:intergenic
ACAACCTCAAATCTTCCTCC+AGG 0.548828 5:+104264575 MsG0580029940.01.T01:CDS
TTGAAGAGATTGCATAGAAG+TGG 0.548883 5:+104265190 MsG0580029940.01.T01:CDS
TAGATATATTTCTATAAACA+AGG 0.549732 5:+104264964 MsG0580029940.01.T01:CDS
TGCCTCCAATACTCTCCATA+GGG 0.549736 5:-104264851 None:intergenic
GGATCAAAATAAGACCCAAA+AGG 0.549908 5:-104264508 None:intergenic
ATTGTCAAATGAAATCCATC+CGG 0.554717 5:-104265319 None:intergenic
ATTGGTAGCTTCCAAGGACC+TGG 0.555997 5:-104264593 None:intergenic
GTTACATGTTATTAGTGGAA+TGG 0.560532 5:+104265159 MsG0580029940.01.T01:CDS
ACATGTAACCAATGCTGGGA+GGG 0.566467 5:-104265145 None:intergenic
TATTGGAAGCATACATCACC+TGG 0.570581 5:+104264616 MsG0580029940.01.T01:CDS
CTATGGAGAGTATTGGAGGC+AGG 0.579208 5:+104264853 MsG0580029940.01.T01:CDS
GGTGAGGTAGGGAGCCAACC+AGG 0.589150 5:-104264634 None:intergenic
AATAACATGTAACCAATGCT+GGG 0.591924 5:-104265149 None:intergenic
AGATATATTTCTATAAACAA+GGG 0.593943 5:+104264965 MsG0580029940.01.T01:CDS
GATGGCTCTTCTAATCCGGA+TGG 0.599540 5:+104265304 MsG0580029940.01.T01:CDS
GATATATTTCTATAAACAAG+GGG 0.620905 5:+104264966 MsG0580029940.01.T01:CDS
GGAAGCATACATCACCTGGT+TGG 0.626537 5:+104264620 MsG0580029940.01.T01:CDS
TGGAGAGACTTCAGTCATAG+TGG 0.629279 5:+104264709 MsG0580029940.01.T01:CDS
ATCATTCCAATCAATTCGAG+AGG 0.631603 5:+104264922 MsG0580029940.01.T01:CDS
AATTCTCTCATTCTGTGGTG+AGG 0.648407 5:-104264650 None:intergenic
AACATGTAACCAATGCTGGG+AGG 0.667083 5:-104265146 None:intergenic
GGTAGCTTCCAAGGACCTGG+AGG 0.680604 5:-104264590 None:intergenic
ATTTCTAGACCAAGAGAACG+AGG 0.700841 5:-104264794 None:intergenic
CATGAAGGAATCTATGTCAG+TGG 0.708876 5:+104265093 MsG0580029940.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAATAACCTGAATAA+CGG - Chr5:104265359-104265378 None:intergenic 15.0%
!!! AGATATATTTCTATAAACAA+GGG + Chr5:104264965-104264984 MsG0580029940.01.T01:CDS 15.0%
!!! TAGATATATTTCTATAAACA+AGG + Chr5:104264964-104264983 MsG0580029940.01.T01:CDS 15.0%
!!! GATATATTTCTATAAACAAG+GGG + Chr5:104264966-104264985 MsG0580029940.01.T01:CDS 20.0%
! TGGAGAATAATTTCTTCTTA+TGG + Chr5:104264477-104264496 MsG0580029940.01.T01:CDS 25.0%
!! ATGTTTGAGATTCAAAAGAT+AGG - Chr5:104265284-104265303 None:intergenic 25.0%
!!! ATCTTTTGGTGATAATTGTA+AGG + Chr5:104265048-104265067 MsG0580029940.01.T01:CDS 25.0%
!!! CTTATTTTGATCCTAAATGT+GGG + Chr5:104264518-104264537 MsG0580029940.01.T01:CDS 25.0%
!!! TCTTATTTTGATCCTAAATG+TGG + Chr5:104264517-104264536 MsG0580029940.01.T01:CDS 25.0%
AATAACATGTAACCAATGCT+GGG - Chr5:104265152-104265171 None:intergenic 30.0%
ACAAAAAAGACTAGTGAAGA+TGG + Chr5:104265247-104265266 MsG0580029940.01.T01:CDS 30.0%
AGAGAATTGTCCCAAAAATA+TGG + Chr5:104264665-104264684 MsG0580029940.01.T01:CDS 30.0%
AGCATATATCTTGTTCATGA+AGG + Chr5:104265078-104265097 MsG0580029940.01.T01:CDS 30.0%
ATTGTCAAATGAAATCCATC+CGG - Chr5:104265322-104265341 None:intergenic 30.0%
GACATATAACATCACTTCTA+GGG + Chr5:104265024-104265043 MsG0580029940.01.T01:CDS 30.0%
GTTACATGTTATTAGTGGAA+TGG + Chr5:104265159-104265178 MsG0580029940.01.T01:CDS 30.0%
TAATAACATGTAACCAATGC+TGG - Chr5:104265153-104265172 None:intergenic 30.0%
TGACATATAACATCACTTCT+AGG + Chr5:104265023-104265042 MsG0580029940.01.T01:CDS 30.0%
TGATGTATGCTTCCAATAAT+TGG - Chr5:104264614-104264633 None:intergenic 30.0%
! CATTGGTTACATGTTATTAG+TGG + Chr5:104265154-104265173 MsG0580029940.01.T01:CDS 30.0%
! CTTTTGAATCTCAAACATGA+TGG + Chr5:104265286-104265305 MsG0580029940.01.T01:CDS 30.0%
! GGTCTAGAAATTGTTTCTTA+TGG + Chr5:104264806-104264825 MsG0580029940.01.T01:CDS 30.0%
!! ATTTGTTTTCAACACCTCTT+TGG - Chr5:104264753-104264772 None:intergenic 30.0%
ATCATTCCAATCAATTCGAG+AGG + Chr5:104264922-104264941 MsG0580029940.01.T01:CDS 35.0%
ATTGCATAGAAGTGGTGATA+TGG + Chr5:104265198-104265217 MsG0580029940.01.T01:CDS 35.0%
CAAAATAAGACCCAAAAGGA+TGG - Chr5:104264507-104264526 None:intergenic 35.0%
CAACATTAAAGCCGTTATTC+AGG + Chr5:104265345-104265364 MsG0580029940.01.T01:CDS 35.0%
GGATCAAAATAAGACCCAAA+AGG - Chr5:104264511-104264530 None:intergenic 35.0%
GGTACGAAAAATATGCACAT+TGG + Chr5:104264874-104264893 MsG0580029940.01.T01:CDS 35.0%
TTCCAAAGAAATTGCCAAAG+AGG + Chr5:104264736-104264755 MsG0580029940.01.T01:CDS 35.0%
TTGAAGAGATTGCATAGAAG+TGG + Chr5:104265190-104265209 MsG0580029940.01.T01:CDS 35.0%
AATTCTCTCATTCTGTGGTG+AGG - Chr5:104264653-104264672 None:intergenic 40.0%
ACATGATGGCTCTTCTAATC+CGG + Chr5:104265300-104265319 MsG0580029940.01.T01:CDS 40.0%
CACCTCTTTGGCAATTTCTT+TGG - Chr5:104264741-104264760 None:intergenic 40.0%
CATGAAGGAATCTATGTCAG+TGG + Chr5:104265093-104265112 MsG0580029940.01.T01:CDS 40.0%
CCTTGGAAGCTACCAATTAT+TGG + Chr5:104264599-104264618 MsG0580029940.01.T01:CDS 40.0%
TGAATCGCTTTCCCACATTT+AGG - Chr5:104264532-104264551 None:intergenic 40.0%
! ATTTCTAGACCAAGAGAACG+AGG - Chr5:104264797-104264816 None:intergenic 40.0%
! CATGAGAGGGCCATATTTTT+GGG - Chr5:104264678-104264697 None:intergenic 40.0%
! CCAATAATTGGTAGCTTCCA+AGG - Chr5:104264602-104264621 None:intergenic 40.0%
! CTGAAGTCTCTCCAAGTTTT+AGG - Chr5:104264703-104264722 None:intergenic 40.0%
! TATTGGAAGCATACATCACC+TGG + Chr5:104264616-104264635 MsG0580029940.01.T01:CDS 40.0%
! TTATGGCTCTCCATCCTTTT+GGG + Chr5:104264494-104264513 MsG0580029940.01.T01:CDS 40.0%
! TTTCACCCTATGGAGAGTAT+TGG + Chr5:104264846-104264865 MsG0580029940.01.T01:CDS 40.0%
!!! ATCACTTCTAGGGCATCTTT+TGG + Chr5:104265034-104265053 MsG0580029940.01.T01:CDS 40.0%
!!! CAAGTTTTAGGTGCATGAGA+GGG - Chr5:104264691-104264710 None:intergenic 40.0%
!!! GACATTGCTTTTTCACCCTA+TGG + Chr5:104264836-104264855 MsG0580029940.01.T01:CDS 40.0%
AACATGTAACCAATGCTGGG+AGG - Chr5:104265149-104265168 None:intergenic 45.0%
ACAACCTCAAATCTTCCTCC+AGG + Chr5:104264575-104264594 MsG0580029940.01.T01:CDS 45.0%
ACATGTAACCAATGCTGGGA+GGG - Chr5:104265148-104265167 None:intergenic 45.0%
ATTTGTTTCCCTCCCAGCAT+TGG + Chr5:104265137-104265156 MsG0580029940.01.T01:CDS 45.0%
CCAATCAATTCGAGAGGAAG+AGG + Chr5:104264928-104264947 MsG0580029940.01.T01:CDS 45.0%
CCTCTCATGCACCTAAAACT+TGG + Chr5:104264689-104264708 MsG0580029940.01.T01:CDS 45.0%
CCTCTTCCTCTCGAATTGAT+TGG - Chr5:104264931-104264950 None:intergenic 45.0%
GGGACAATTCTCTCATTCTG+TGG - Chr5:104264658-104264677 None:intergenic 45.0%
TCTCATTCTGTGGTGAGGTA+GGG - Chr5:104264648-104264667 None:intergenic 45.0%
TGCCTCCAATACTCTCCATA+GGG - Chr5:104264854-104264873 None:intergenic 45.0%
TGGAGAGACTTCAGTCATAG+TGG + Chr5:104264709-104264728 MsG0580029940.01.T01:CDS 45.0%
! CTTATGGCTCTCCATCCTTT+TGG + Chr5:104264493-104264512 MsG0580029940.01.T01:CDS 45.0%
! GCATGAGAGGGCCATATTTT+TGG - Chr5:104264679-104264698 None:intergenic 45.0%
!!! CCAAGTTTTAGGTGCATGAG+AGG - Chr5:104264692-104264711 None:intergenic 45.0%
AGGACCTGGAGGAAGATTTG+AGG - Chr5:104264582-104264601 None:intergenic 50.0%
CAAATCTTCCTCCAGGTCCT+TGG + Chr5:104264582-104264601 MsG0580029940.01.T01:CDS 50.0%
CCAAGAGAACGAGGTCTTTG+TGG - Chr5:104264788-104264807 None:intergenic 50.0%
CCACAAAGACCTCGTTCTCT+TGG + Chr5:104264785-104264804 MsG0580029940.01.T01:CDS 50.0%
CTCTCATTCTGTGGTGAGGT+AGG - Chr5:104264649-104264668 None:intergenic 50.0%
CTGCCTCCAATACTCTCCAT+AGG - Chr5:104264855-104264874 None:intergenic 50.0%
GATGGCTCTTCTAATCCGGA+TGG + Chr5:104265304-104265323 MsG0580029940.01.T01:CDS 50.0%
! ATTGGTAGCTTCCAAGGACC+TGG - Chr5:104264596-104264615 None:intergenic 50.0%
! GGAAGCATACATCACCTGGT+TGG + Chr5:104264620-104264639 MsG0580029940.01.T01:CDS 50.0%
!! CACCCTATGGAGAGTATTGG+AGG + Chr5:104264849-104264868 MsG0580029940.01.T01:CDS 50.0%
!! CTATGGAGAGTATTGGAGGC+AGG + Chr5:104264853-104264872 MsG0580029940.01.T01:CDS 50.0%
GGTAGCTTCCAAGGACCTGG+AGG - Chr5:104264593-104264612 None:intergenic 60.0%
GGTGAGGTAGGGAGCCAACC+AGG - Chr5:104264637-104264656 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 104264476 104265381 104264476 ID=MsG0580029940.01;Name=MsG0580029940.01
Chr5 mRNA 104264476 104265381 104264476 ID=MsG0580029940.01.T01;Parent=MsG0580029940.01;Name=MsG0580029940.01.T01;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|301
Chr5 exon 104264476 104265381 104264476 ID=MsG0580029940.01.T01:exon:15175;Parent=MsG0580029940.01.T01
Chr5 CDS 104264476 104265381 104264476 ID=MsG0580029940.01.T01:cds;Parent=MsG0580029940.01.T01
Gene Sequence

>MsG0580029940.01.T01

ATGGAGAATAATTTCTTCTTATGGCTCTCCATCCTTTTGGGTCTTATTTTGATCCTAAATGTGGGAAAGCGATTCAAAAGTAAAAGCAGTGACAATAATACAACCTCAAATCTTCCTCCAGGTCCTTGGAAGCTACCAATTATTGGAAGCATACATCACCTGGTTGGCTCCCTACCTCACCACAGAATGAGAGAATTGTCCCAAAAATATGGCCCTCTCATGCACCTAAAACTTGGAGAGACTTCAGTCATAGTGGTCTCTTCCAAAGAAATTGCCAAAGAGGTGTTGAAAACAAATGAAGTCACATTTCCACAAAGACCTCGTTCTCTTGGTCTAGAAATTGTTTCTTATGGTTGCACTGACATTGCTTTTTCACCCTATGGAGAGTATTGGAGGCAGGTACGAAAAATATGCACATTGGAGCTGTTGAGTGTTAAACGTGTGAGATCATTCCAATCAATTCGAGAGGAAGAGGTGTCAAAATTAATTAGATATATTTCTATAAACAAGGGGTCTACAATCAATCTCACAGATGAAATTTTATCTATGACATATAACATCACTTCTAGGGCATCTTTTGGTGATAATTGTAAGGACAATAAAGCATATATCTTGTTCATGAAGGAATCTATGTCAGTGGCTGAGAGTTTCAGTATTCATAATTTGTTTCCCTCCCAGCATTGGTTACATGTTATTAGTGGAATGGTGCATAAATTGAAGAGATTGCATAGAAGTGGTGATATGGTTCTTCAAAATATCATCAACAAAGCAACAAAAAAGACTAGTGAAGATGGAAGTCTTTTGTCCTATCTTTTGAATCTCAAACATGATGGCTCTTCTAATCCGGATGGATTTCATTTGACAATCGACAACATTAAAGCCGTTATTCAGGTTATTTTTTTATAA
Protein sequence

>MsG0580029940.01.T01

MENNFFLWLSILLGLILILNVGKRFKSKSSDNNTTSNLPPGPWKLPIIGSIHHLVGSLPHHRMRELSQKYGPLMHLKLGETSVIVVSSKEIAKEVLKTNEVTFPQRPRSLGLEIVSYGCTDIAFSPYGEYWRQVRKICTLELLSVKRVRSFQSIREEEVSKLIRYISINKGSTINLTDEILSMTYNITSRASFGDNCKDNKAYILFMKESMSVAESFSIHNLFPSQHWLHVISGMVHKLKRLHRSGDMVLQNIINKATKKTSEDGSLLSYLLNLKHDGSSNPDGFHLTIDNIKAVIQVIFL*