Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041858.01.T01 | XP_013443753.1 | 87.613 | 444 | 26 | 1 | 1 | 415 | 1 | 444 | 0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041858.01.T01 | Q9SD53 | 26.066 | 422 | 267 | 11 | 19 | 405 | 38 | 449 | 2.33E-33 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041858.01.T01 | A0A072TLP8 | 87.613 | 444 | 26 | 1 | 1 | 415 | 1 | 444 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048357.01 | MsG0880041858.01 | 0.891497 | 3.763197e-74 | 3.307851e-70 |
| MsG0180000036.01 | MsG0880041858.01 | 0.805155 | 1.530123e-49 | 8.036634e-47 |
| MsG0180000404.01 | MsG0880041858.01 | 0.803828 | 2.892728e-49 | 1.468356e-46 |
| MsG0180000632.01 | MsG0880041858.01 | 0.873209 | 1.754951e-67 | 7.553960e-64 |
| MsG0180000994.01 | MsG0880041858.01 | 0.832593 | 8.653582e-56 | 9.716854e-53 |
| MsG0180001200.01 | MsG0880041858.01 | 0.874614 | 5.887520e-68 | 2.667679e-64 |
| MsG0180001771.01 | MsG0880041858.01 | 0.879655 | 1.044065e-69 | 5.707080e-66 |
| MsG0180003741.01 | MsG0880041858.01 | 0.852468 | 4.527075e-61 | 9.468321e-58 |
| MsG0180005113.01 | MsG0880041858.01 | 0.819152 | 1.349582e-52 | 1.030263e-49 |
| MsG0180005153.01 | MsG0880041858.01 | 0.813368 | 2.652274e-51 | 1.728792e-48 |
| MsG0180005540.01 | MsG0880041858.01 | 0.826058 | 3.340279e-54 | 3.098881e-51 |
| MsG0780040286.01 | MsG0880041858.01 | 0.803860 | 2.849029e-49 | 1.447365e-46 |
| MsG0780040432.01 | MsG0880041858.01 | 0.835583 | 1.542477e-56 | 1.894300e-53 |
| MsG0780040514.01 | MsG0880041858.01 | 0.806603 | 7.592634e-50 | 4.138436e-47 |
| MsG0780040846.01 | MsG0880041858.01 | 0.862444 | 5.044678e-64 | 1.477855e-60 |
| MsG0780040966.01 | MsG0880041858.01 | 0.863847 | 1.858071e-64 | 5.713754e-61 |
| MsG0780041259.01 | MsG0880041858.01 | 0.826608 | 2.471585e-54 | 2.328996e-51 |
| MsG0780041676.01 | MsG0880041858.01 | 0.842403 | 2.641286e-58 | 4.000817e-55 |
| MsG0780041698.01 | MsG0880041858.01 | 0.834568 | 2.780621e-56 | 3.312914e-53 |
| MsG0880041834.01 | MsG0880041858.01 | 0.845474 | 3.970569e-59 | 6.624753e-56 |
| MsG0880041858.01 | MsG0880042442.01 | 0.850480 | 1.652114e-60 | 3.240524e-57 |
| MsG0880041858.01 | MsG0880042733.01 | 0.828432 | 9.018934e-55 | 8.963275e-52 |
| MsG0880041858.01 | MsG0880042958.01 | 0.841730 | 3.978811e-58 | 5.899350e-55 |
| MsG0880041858.01 | MsG0880042959.01 | 0.827900 | 1.211685e-54 | 1.185578e-51 |
| MsG0880041858.01 | MsG0880045177.01 | 0.814707 | 1.343432e-51 | 9.079921e-49 |
| MsG0880041858.01 | MsG0880045179.01 | 0.877976 | 4.076665e-69 | 2.091676e-65 |
| MsG0880041858.01 | MsG0880045585.01 | 0.851365 | 9.304665e-61 | 1.879159e-57 |
| MsG0880041858.01 | MsG0880045586.01 | 0.858661 | 7.069993e-63 | 1.817966e-59 |
| MsG0880041858.01 | MsG0880046580.01 | 0.808355 | 3.225977e-50 | 1.840646e-47 |
| MsG0880041858.01 | MsG0880046636.01 | 0.814463 | 1.521070e-51 | 1.021339e-48 |
| MsG0880041858.01 | MsG0880046942.01 | 0.805936 | 1.049170e-49 | 5.622217e-47 |
| MsG0280010839.01 | MsG0880041858.01 | 0.813723 | 2.215212e-51 | 1.457887e-48 |
| MsG0380011496.01 | MsG0880041858.01 | 0.849509 | 3.089189e-60 | 5.869442e-57 |
| MsG0380011501.01 | MsG0880041858.01 | 0.830577 | 2.716250e-55 | 2.873278e-52 |
| MsG0380011675.01 | MsG0880041858.01 | 0.818441 | 1.957555e-52 | 1.465553e-49 |
| MsG0380014115.01 | MsG0880041858.01 | 0.830670 | 2.576501e-55 | 2.733225e-52 |
| MsG0680031342.01 | MsG0880041858.01 | 0.807376 | 5.209225e-50 | 2.896834e-47 |
| MsG0680031428.01 | MsG0880041858.01 | 0.831457 | 1.651442e-55 | 1.793186e-52 |
| MsG0680031707.01 | MsG0880041858.01 | 0.898540 | 4.799131e-77 | 5.697439e-73 |
| MsG0680031959.01 | MsG0880041858.01 | 0.827324 | 1.666271e-54 | 1.603409e-51 |
| MsG0680033933.01 | MsG0880041858.01 | 0.837647 | 4.593522e-57 | 6.006152e-54 |
| MsG0680034835.01 | MsG0880041858.01 | 0.828733 | 7.631339e-55 | 7.649776e-52 |
| MsG0480018909.01 | MsG0880041858.01 | 0.859634 | 3.611585e-63 | 9.602316e-60 |
| MsG0480019279.01 | MsG0880041858.01 | 0.820000 | 8.639960e-53 | 6.754062e-50 |
| MsG0480020064.01 | MsG0880041858.01 | 0.803852 | 2.860401e-49 | 1.452832e-46 |
| MsG0480020096.01 | MsG0880041858.01 | 0.839713 | 1.344252e-57 | 1.872030e-54 |
| MsG0480020490.01 | MsG0880041858.01 | 0.807711 | 4.423727e-50 | 2.481463e-47 |
| MsG0480020748.01 | MsG0880041858.01 | 0.857824 | 1.254527e-62 | 3.136606e-59 |
| MsG0480020832.01 | MsG0880041858.01 | 0.810927 | 9.037777e-51 | 5.519781e-48 |
| MsG0480024022.01 | MsG0880041858.01 | 0.867574 | 1.237489e-65 | 4.341749e-62 |
| MsG0380015577.01 | MsG0880041858.01 | 0.801295 | 9.633135e-49 | 4.583915e-46 |
| MsG0380016465.01 | MsG0880041858.01 | 0.835872 | 1.303029e-56 | 1.614284e-53 |
| MsG0380017869.01 | MsG0880041858.01 | 0.820327 | 7.273962e-53 | 5.737477e-50 |
| MsG0580026198.01 | MsG0880041858.01 | 0.812269 | 4.615301e-51 | 2.921277e-48 |
| MsG0580027925.01 | MsG0880041858.01 | 0.832800 | 7.688271e-56 | 8.686263e-53 |
| MsG0580028960.01 | MsG0880041858.01 | 0.815266 | 1.009568e-51 | 6.927641e-49 |
| MsG0580029310.01 | MsG0880041858.01 | 0.848240 | 6.954206e-60 | 1.268006e-56 |
| MsG0580029405.01 | MsG0880041858.01 | 0.810575 | 1.076863e-50 | 6.514797e-48 |
| MsG0580029406.01 | MsG0880041858.01 | 0.858773 | 6.543942e-63 | 1.689203e-59 |
| MsG0580029417.01 | MsG0880041858.01 | 0.877748 | 4.899658e-69 | 2.492310e-65 |
| MsG0580029418.01 | MsG0880041858.01 | 0.903105 | 4.892646e-79 | 7.137672e-75 |
| MsG0580029940.01 | MsG0880041858.01 | 0.817802 | 2.730100e-52 | 2.008181e-49 |
| MsG0580029941.01 | MsG0880041858.01 | 0.836461 | 9.234421e-57 | 1.164544e-53 |
| MsG0680030328.01 | MsG0880041858.01 | 0.816459 | 5.469662e-52 | 3.877728e-49 |
| MsG0680030329.01 | MsG0880041858.01 | 0.800267 | 1.561401e-48 | 7.238933e-46 |
| MsG0280006966.01 | MsG0880041858.01 | 0.829756 | 4.308685e-55 | 4.451466e-52 |
| MsG0280006967.01 | MsG0880041858.01 | 0.863993 | 1.674129e-64 | 5.174397e-61 |
| MsG0280007252.01 | MsG0880041858.01 | 0.836049 | 1.174918e-56 | 1.463438e-53 |
| MsG0280007305.01 | MsG0880041858.01 | 0.873614 | 1.282560e-67 | 5.600718e-64 |
| MsG0280007414.01 | MsG0880041858.01 | 0.835747 | 1.401301e-56 | 1.729584e-53 |
| MsG0280007884.01 | MsG0880041858.01 | 0.855350 | 6.693484e-62 | 1.541056e-58 |
| MsG0280007955.01 | MsG0880041858.01 | 0.820948 | 5.236898e-53 | 4.203117e-50 |
| MsG0280008362.01 | MsG0880041858.01 | 0.825180 | 5.395385e-54 | 4.882145e-51 |
| MsG0280008390.01 | MsG0880041858.01 | 0.857973 | 1.132628e-62 | 2.846234e-59 |
| MsG0280008391.01 | MsG0880041858.01 | 0.862793 | 3.940828e-64 | 1.168665e-60 |
| MsG0280008392.01 | MsG0880041858.01 | 0.860264 | 2.331636e-63 | 6.335058e-60 |
| MsG0280008395.01 | MsG0880041858.01 | 0.887131 | 1.868372e-72 | 1.372178e-68 |
| MsG0280008396.01 | MsG0880041858.01 | 0.830245 | 3.272897e-55 | 3.429279e-52 |
| MsG0280008397.01 | MsG0880041858.01 | 0.839532 | 1.497716e-57 | 2.074185e-54 |
| MsG0280008899.01 | MsG0880041858.01 | 0.809579 | 1.764876e-50 | 1.040152e-47 |
| MsG0280009920.01 | MsG0880041858.01 | 0.815053 | 1.126032e-51 | 7.681640e-49 |
| MsG0280010163.01 | MsG0880041858.01 | 0.810125 | 1.346655e-50 | 8.050991e-48 |
| MsG0280010320.01 | MsG0880041858.01 | 0.827524 | 1.491521e-54 | 1.443476e-51 |
| MsG0680035658.01 | MsG0880041858.01 | 0.817323 | 3.499720e-52 | 2.540616e-49 |
| MsG0680035683.01 | MsG0880041858.01 | 0.883678 | 3.661025e-71 | 2.344536e-67 |
| MsG0780036148.01 | MsG0880041858.01 | 0.835585 | 1.540038e-56 | 1.891480e-53 |
| MsG0780036178.01 | MsG0880041858.01 | 0.821724 | 3.468370e-53 | 2.844455e-50 |
| MsG0780036593.01 | MsG0880041858.01 | 0.809261 | 2.065076e-50 | 1.206780e-47 |
| MsG0780036596.01 | MsG0880041858.01 | 0.802050 | 6.742655e-49 | 3.270424e-46 |
| MsG0780037420.01 | MsG0880041858.01 | 0.825546 | 4.419498e-54 | 4.040528e-51 |
| MsG0780037492.01 | MsG0880041858.01 | 0.827433 | 1.568879e-54 | 1.514429e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880041868.01 | MsG0880041858.01 | PPI |
| MsG0880041861.01 | MsG0880041858.01 | PPI |
| MsG0880041860.01 | MsG0880041858.01 | PPI |
| MsG0880041863.01 | MsG0880041858.01 | PPI |
| MsG0880041857.01 | MsG0880041858.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041858.01.T01 | MTR_8g005235 | 87.613 | 444 | 26 | 1 | 1 | 415 | 1 | 444 | 0.0 | 801 |
| MsG0880041858.01.T01 | MTR_8g005325 | 73.483 | 445 | 88 | 2 | 1 | 415 | 30 | 474 | 0.0 | 679 |
| MsG0880041858.01.T01 | MTR_8g006525 | 72.158 | 431 | 87 | 2 | 2 | 407 | 3 | 425 | 0.0 | 626 |
| MsG0880041858.01.T01 | MTR_0209s0060 | 70.602 | 432 | 88 | 4 | 3 | 407 | 5 | 424 | 0.0 | 605 |
| MsG0880041858.01.T01 | MTR_0209s0030 | 70.602 | 432 | 88 | 4 | 3 | 407 | 5 | 424 | 0.0 | 605 |
| MsG0880041858.01.T01 | MTR_8g005295 | 46.614 | 502 | 165 | 11 | 9 | 415 | 19 | 512 | 2.14e-140 | 410 |
| MsG0880041858.01.T01 | MTR_8g005285 | 47.325 | 486 | 171 | 11 | 9 | 415 | 19 | 498 | 4.58e-136 | 399 |
| MsG0880041858.01.T01 | MTR_8g005265 | 48.499 | 433 | 174 | 10 | 26 | 413 | 26 | 454 | 1.03e-127 | 376 |
| MsG0880041858.01.T01 | MTR_8g005225 | 47.511 | 442 | 187 | 7 | 12 | 413 | 22 | 458 | 1.30e-125 | 371 |
| MsG0880041858.01.T01 | MTR_4g112660 | 37.972 | 424 | 156 | 11 | 26 | 412 | 5 | 358 | 5.54e-75 | 238 |
| MsG0880041858.01.T01 | MTR_6g009590 | 33.744 | 406 | 233 | 13 | 12 | 397 | 7 | 396 | 4.67e-64 | 211 |
| MsG0880041858.01.T01 | MTR_6g011050 | 34.390 | 410 | 235 | 11 | 3 | 397 | 4 | 394 | 9.45e-64 | 210 |
| MsG0880041858.01.T01 | MTR_0024s0080 | 34.545 | 385 | 218 | 10 | 28 | 397 | 26 | 391 | 7.13e-63 | 208 |
| MsG0880041858.01.T01 | MTR_6g011060 | 33.882 | 425 | 240 | 13 | 4 | 403 | 2 | 410 | 9.78e-63 | 208 |
| MsG0880041858.01.T01 | MTR_6g010920 | 33.416 | 401 | 234 | 10 | 21 | 405 | 19 | 402 | 7.66e-62 | 205 |
| MsG0880041858.01.T01 | MTR_6g009610 | 33.898 | 413 | 236 | 12 | 4 | 397 | 2 | 396 | 8.17e-62 | 206 |
| MsG0880041858.01.T01 | MTR_3g107590 | 35.766 | 411 | 234 | 11 | 6 | 396 | 5 | 405 | 3.35e-61 | 204 |
| MsG0880041858.01.T01 | MTR_6g010890 | 32.388 | 423 | 248 | 14 | 9 | 404 | 7 | 418 | 1.82e-59 | 199 |
| MsG0880041858.01.T01 | MTR_3g079390 | 32.401 | 429 | 239 | 14 | 14 | 404 | 27 | 442 | 1.69e-58 | 198 |
| MsG0880041858.01.T01 | MTR_6g010810 | 33.498 | 406 | 235 | 12 | 17 | 404 | 12 | 400 | 2.17e-57 | 194 |
| MsG0880041858.01.T01 | MTR_6g009170 | 34.069 | 408 | 224 | 15 | 17 | 396 | 15 | 405 | 6.08e-54 | 185 |
| MsG0880041858.01.T01 | MTR_7g011980 | 31.296 | 409 | 199 | 12 | 4 | 405 | 2 | 335 | 3.59e-49 | 170 |
| MsG0880041858.01.T01 | MTR_2g041180 | 27.431 | 401 | 260 | 12 | 27 | 405 | 50 | 441 | 8.62e-41 | 151 |
| MsG0880041858.01.T01 | MTR_6g010850 | 32.219 | 329 | 182 | 10 | 97 | 404 | 33 | 341 | 3.40e-39 | 145 |
| MsG0880041858.01.T01 | MTR_2g036320 | 27.764 | 407 | 268 | 11 | 17 | 403 | 56 | 456 | 4.90e-39 | 147 |
| MsG0880041858.01.T01 | MTR_5g016570 | 27.727 | 440 | 240 | 13 | 12 | 388 | 79 | 503 | 3.10e-38 | 145 |
| MsG0880041858.01.T01 | MTR_2g035640 | 32.635 | 334 | 183 | 9 | 92 | 403 | 27 | 340 | 2.90e-37 | 139 |
| MsG0880041858.01.T01 | MTR_5g086340 | 25.837 | 418 | 252 | 12 | 24 | 404 | 29 | 425 | 6.88e-32 | 126 |
| MsG0880041858.01.T01 | MTR_6g009580 | 35.789 | 190 | 108 | 3 | 221 | 396 | 30 | 219 | 5.28e-29 | 113 |
| MsG0880041858.01.T01 | MTR_7g060840 | 25.189 | 397 | 253 | 13 | 41 | 405 | 42 | 426 | 3.51e-22 | 98.2 |
| MsG0880041858.01.T01 | MTR_8g042830 | 23.462 | 439 | 243 | 13 | 7 | 403 | 18 | 405 | 4.31e-22 | 97.8 |
| MsG0880041858.01.T01 | MTR_7g060220 | 25.323 | 387 | 230 | 11 | 44 | 388 | 44 | 413 | 1.02e-19 | 91.3 |
| MsG0880041858.01.T01 | MTR_7g060260 | 25.248 | 404 | 264 | 11 | 9 | 388 | 14 | 403 | 1.71e-19 | 90.5 |
| MsG0880041858.01.T01 | MTR_5g086230 | 34.270 | 178 | 99 | 5 | 6 | 173 | 12 | 181 | 2.14e-19 | 86.3 |
| MsG0880041858.01.T01 | MTR_6g009600 | 34.815 | 135 | 76 | 3 | 244 | 366 | 17 | 151 | 1.27e-18 | 82.8 |
| MsG0880041858.01.T01 | MTR_8g037920 | 26.150 | 413 | 230 | 15 | 48 | 403 | 7 | 401 | 2.93e-18 | 86.7 |
| MsG0880041858.01.T01 | MTR_8g042170 | 26.304 | 441 | 244 | 16 | 29 | 404 | 26 | 450 | 7.11e-18 | 85.9 |
| MsG0880041858.01.T01 | MTR_7g060115 | 25.594 | 379 | 227 | 14 | 41 | 369 | 41 | 414 | 1.75e-17 | 84.3 |
| MsG0880041858.01.T01 | MTR_7g060080 | 32.886 | 149 | 95 | 2 | 263 | 406 | 42 | 190 | 1.96e-17 | 80.5 |
| MsG0880041858.01.T01 | MTR_7g060020 | 25.061 | 411 | 242 | 16 | 16 | 385 | 24 | 409 | 3.75e-17 | 83.6 |
| MsG0880041858.01.T01 | MTR_7g059810 | 25.128 | 390 | 240 | 10 | 41 | 388 | 42 | 421 | 3.79e-17 | 83.6 |
| MsG0880041858.01.T01 | MTR_7g060310 | 32.609 | 138 | 92 | 1 | 267 | 403 | 342 | 479 | 4.75e-17 | 83.2 |
| MsG0880041858.01.T01 | MTR_7g059520 | 33.333 | 117 | 77 | 1 | 269 | 384 | 37 | 153 | 8.67e-17 | 78.2 |
| MsG0880041858.01.T01 | MTR_7g059525 | 28.873 | 142 | 100 | 1 | 263 | 403 | 134 | 275 | 2.82e-16 | 79.3 |
| MsG0880041858.01.T01 | MTR_7g059540 | 28.986 | 138 | 97 | 1 | 267 | 403 | 330 | 467 | 3.71e-16 | 80.5 |
| MsG0880041858.01.T01 | MTR_7g059540 | 28.986 | 138 | 97 | 1 | 267 | 403 | 321 | 458 | 4.09e-16 | 80.5 |
| MsG0880041858.01.T01 | MTR_4g009340 | 33.540 | 161 | 91 | 6 | 27 | 175 | 42 | 198 | 7.36e-16 | 80.1 |
| MsG0880041858.01.T01 | MTR_5g087580 | 27.711 | 166 | 110 | 3 | 249 | 404 | 42 | 207 | 8.71e-16 | 76.6 |
| MsG0880041858.01.T01 | MTR_0182s0060 | 33.333 | 138 | 90 | 2 | 267 | 403 | 372 | 508 | 9.55e-16 | 79.3 |
| MsG0880041858.01.T01 | MTR_7g059480 | 30.986 | 142 | 97 | 1 | 263 | 403 | 624 | 765 | 1.52e-15 | 79.3 |
| MsG0880041858.01.T01 | MTR_7g060320 | 31.707 | 123 | 83 | 1 | 267 | 388 | 319 | 441 | 3.08e-15 | 77.8 |
| MsG0880041858.01.T01 | MTR_7g060160 | 24.713 | 348 | 219 | 11 | 41 | 368 | 41 | 365 | 4.00e-15 | 77.0 |
| MsG0880041858.01.T01 | MTR_4g009590 | 32.919 | 161 | 92 | 6 | 27 | 175 | 42 | 198 | 4.84e-15 | 77.4 |
| MsG0880041858.01.T01 | MTR_4g009590 | 28.358 | 134 | 95 | 1 | 271 | 403 | 409 | 542 | 9.34e-11 | 63.9 |
| MsG0880041858.01.T01 | MTR_3g107600 | 29.688 | 192 | 94 | 6 | 221 | 397 | 406 | 571 | 7.85e-15 | 77.0 |
| MsG0880041858.01.T01 | MTR_7g446270 | 32.520 | 123 | 82 | 1 | 267 | 388 | 339 | 461 | 1.03e-14 | 76.3 |
| MsG0880041858.01.T01 | MTR_4g009620 | 33.540 | 161 | 90 | 7 | 27 | 175 | 42 | 197 | 1.35e-14 | 75.9 |
| MsG0880041858.01.T01 | MTR_7g059510 | 23.333 | 420 | 234 | 12 | 12 | 384 | 20 | 398 | 3.59e-14 | 74.3 |
| MsG0880041858.01.T01 | MTR_7g060370 | 23.684 | 418 | 237 | 14 | 41 | 388 | 42 | 447 | 6.24e-14 | 73.6 |
| MsG0880041858.01.T01 | MTR_5g086260 | 28.409 | 176 | 111 | 4 | 250 | 412 | 136 | 309 | 2.35e-12 | 67.8 |
| MsG0880041858.01.T01 | MTR_7g017620 | 30.534 | 131 | 89 | 2 | 273 | 402 | 401 | 530 | 7.40e-12 | 67.4 |
| MsG0880041858.01.T01 | MTR_7g017620 | 27.717 | 184 | 115 | 5 | 7 | 175 | 17 | 197 | 6.15e-11 | 64.7 |
| MsG0880041858.01.T01 | MTR_8g037923 | 29.747 | 158 | 88 | 6 | 267 | 403 | 307 | 462 | 3.69e-11 | 65.1 |
| MsG0880041858.01.T01 | MTR_0067s0010 | 24.438 | 356 | 198 | 12 | 29 | 332 | 45 | 381 | 5.76e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880041858.01.T01 | AT2G28580 | 36.449 | 428 | 219 | 13 | 15 | 404 | 28 | 440 | 9.38e-69 | 225 |
| MsG0880041858.01.T01 | AT2G28580 | 36.364 | 429 | 220 | 13 | 15 | 405 | 96 | 509 | 2.85e-68 | 226 |
| MsG0880041858.01.T01 | AT2G28580 | 36.364 | 429 | 220 | 13 | 15 | 405 | 110 | 523 | 3.85e-68 | 226 |
| MsG0880041858.01.T01 | AT2G28580 | 36.211 | 417 | 220 | 12 | 15 | 405 | 96 | 492 | 3.15e-66 | 220 |
| MsG0880041858.01.T01 | AT2G28580 | 36.211 | 417 | 220 | 12 | 15 | 405 | 110 | 506 | 3.75e-66 | 220 |
| MsG0880041858.01.T01 | AT2G44930 | 34.266 | 429 | 223 | 12 | 24 | 406 | 75 | 490 | 3.65e-63 | 212 |
| MsG0880041858.01.T01 | AT4G31980 | 30.077 | 389 | 230 | 11 | 26 | 393 | 292 | 659 | 7.24e-49 | 176 |
| MsG0880041858.01.T01 | AT3G50150 | 29.128 | 436 | 259 | 13 | 12 | 405 | 68 | 495 | 2.97e-48 | 172 |
| MsG0880041858.01.T01 | AT1G67150 | 29.340 | 409 | 237 | 8 | 28 | 404 | 7 | 395 | 5.90e-48 | 169 |
| MsG0880041858.01.T01 | AT1G67150 | 29.340 | 409 | 237 | 8 | 28 | 404 | 7 | 395 | 5.90e-48 | 169 |
| MsG0880041858.01.T01 | AT1G67150 | 28.571 | 413 | 239 | 7 | 28 | 404 | 7 | 399 | 2.52e-47 | 167 |
| MsG0880041858.01.T01 | AT5G11290 | 27.792 | 403 | 269 | 8 | 14 | 403 | 18 | 411 | 3.24e-47 | 167 |
| MsG0880041858.01.T01 | AT3G50160 | 29.877 | 405 | 243 | 10 | 22 | 403 | 99 | 485 | 2.36e-46 | 167 |
| MsG0880041858.01.T01 | AT2G28580 | 35.411 | 353 | 175 | 13 | 15 | 329 | 110 | 447 | 1.37e-44 | 161 |
| MsG0880041858.01.T01 | AT3G50170 | 27.924 | 419 | 260 | 9 | 24 | 404 | 110 | 524 | 7.13e-44 | 160 |
| MsG0880041858.01.T01 | AT1G67150 | 29.337 | 392 | 216 | 10 | 28 | 404 | 7 | 352 | 2.16e-43 | 155 |
| MsG0880041858.01.T01 | AT2G36430 | 28.198 | 383 | 250 | 9 | 25 | 388 | 43 | 419 | 1.53e-42 | 155 |
| MsG0880041858.01.T01 | AT3G50120 | 27.500 | 440 | 266 | 12 | 12 | 403 | 81 | 515 | 3.40e-42 | 156 |
| MsG0880041858.01.T01 | AT3G50140 | 26.637 | 443 | 270 | 12 | 6 | 405 | 95 | 525 | 1.57e-41 | 154 |
| MsG0880041858.01.T01 | AT1G65985 | 28.406 | 433 | 220 | 11 | 26 | 388 | 13 | 425 | 3.45e-40 | 149 |
| MsG0880041858.01.T01 | AT1G65985 | 28.406 | 433 | 220 | 11 | 26 | 388 | 13 | 425 | 3.45e-40 | 149 |
| MsG0880041858.01.T01 | AT3G50180 | 27.021 | 433 | 277 | 13 | 3 | 403 | 147 | 572 | 7.71e-40 | 150 |
| MsG0880041858.01.T01 | AT3G47210 | 30.245 | 367 | 212 | 10 | 19 | 358 | 85 | 434 | 7.54e-39 | 145 |
| MsG0880041858.01.T01 | AT3G50130 | 28.501 | 407 | 244 | 13 | 22 | 388 | 134 | 533 | 4.07e-38 | 145 |
| MsG0880041858.01.T01 | AT5G22540 | 26.531 | 392 | 243 | 11 | 27 | 388 | 31 | 407 | 4.58e-35 | 135 |
| MsG0880041858.01.T01 | AT3G47250 | 24.228 | 421 | 276 | 9 | 19 | 404 | 53 | 465 | 6.40e-35 | 135 |
| MsG0880041858.01.T01 | AT3G47250 | 24.228 | 421 | 276 | 9 | 19 | 404 | 53 | 465 | 6.40e-35 | 135 |
| MsG0880041858.01.T01 | AT3G47250 | 24.228 | 421 | 276 | 9 | 19 | 404 | 53 | 465 | 6.40e-35 | 135 |
| MsG0880041858.01.T01 | AT5G22550 | 24.835 | 455 | 266 | 13 | 19 | 405 | 30 | 476 | 1.17e-34 | 134 |
| MsG0880041858.01.T01 | AT3G47200 | 26.066 | 422 | 267 | 11 | 19 | 405 | 38 | 449 | 2.38e-34 | 133 |
| MsG0880041858.01.T01 | AT3G47200 | 26.066 | 422 | 267 | 11 | 19 | 405 | 38 | 449 | 2.38e-34 | 133 |
| MsG0880041858.01.T01 | AT3G50190 | 26.207 | 435 | 249 | 13 | 6 | 403 | 78 | 477 | 1.79e-31 | 125 |
| MsG0880041858.01.T01 | AT5G11290 | 25.356 | 351 | 242 | 7 | 64 | 403 | 1 | 342 | 3.57e-31 | 122 |
| MsG0880041858.01.T01 | AT3G60470 | 33.054 | 239 | 111 | 7 | 21 | 228 | 26 | 246 | 1.22e-26 | 112 |
| MsG0880041858.01.T01 | AT3G60470 | 29.148 | 223 | 129 | 6 | 199 | 404 | 317 | 527 | 4.76e-20 | 92.8 |
| MsG0880041858.01.T01 | AT5G22560 | 26.562 | 256 | 158 | 6 | 3 | 236 | 18 | 265 | 2.91e-22 | 99.4 |
| MsG0880041858.01.T01 | AT5G22560 | 29.104 | 134 | 93 | 1 | 274 | 405 | 370 | 503 | 2.83e-12 | 68.9 |
| MsG0880041858.01.T01 | AT3G50150 | 29.665 | 209 | 132 | 6 | 24 | 224 | 87 | 288 | 3.94e-22 | 98.2 |
| MsG0880041858.01.T01 | AT3G50170 | 32.051 | 156 | 99 | 3 | 24 | 175 | 110 | 262 | 3.63e-21 | 95.5 |
| MsG0880041858.01.T01 | AT3G50140 | 27.053 | 207 | 140 | 5 | 6 | 208 | 95 | 294 | 2.70e-20 | 92.8 |
| MsG0880041858.01.T01 | AT3G44710 | 27.004 | 237 | 159 | 8 | 20 | 250 | 40 | 268 | 6.98e-18 | 85.9 |
| MsG0880041858.01.T01 | AT3G50190 | 28.333 | 180 | 113 | 5 | 6 | 181 | 78 | 245 | 1.13e-16 | 81.3 |
| MsG0880041858.01.T01 | AT3G50190 | 28.333 | 180 | 113 | 5 | 6 | 181 | 78 | 245 | 1.37e-16 | 81.3 |
| MsG0880041858.01.T01 | AT3G50190 | 28.333 | 180 | 113 | 5 | 6 | 181 | 78 | 245 | 1.37e-16 | 81.3 |
| MsG0880041858.01.T01 | AT3G44700 | 34.677 | 124 | 75 | 5 | 14 | 131 | 34 | 157 | 1.00e-14 | 73.2 |
| MsG0880041858.01.T01 | AT3G02645 | 32.787 | 122 | 81 | 1 | 269 | 389 | 376 | 497 | 1.36e-14 | 75.9 |
| MsG0880041858.01.T01 | AT3G02645 | 30.822 | 146 | 95 | 3 | 27 | 172 | 43 | 182 | 3.29e-11 | 65.5 |
Find 52 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAACAACTATTCCGATTA+TGG | 0.250973 | 8:+312485 | None:intergenic |
| ATAGATATTTCCATTACTTT+TGG | 0.268415 | 8:-313545 | MsG0880041858.01.T01:CDS |
| CCTCAAGTCTTTCGTTGTTA+TGG | 0.305998 | 8:+313586 | None:intergenic |
| ATTTGTTGACATGATACTAT+TGG | 0.308870 | 8:-313409 | MsG0880041858.01.T01:CDS |
| TAGCAACTCCGCGTCTTCTT+TGG | 0.332052 | 8:+312716 | None:intergenic |
| GTCGTGTTATTACCAACTTA+TGG | 0.367785 | 8:-312601 | MsG0880041858.01.T01:CDS |
| TGATATCTGTGAATTTCTTT+TGG | 0.373016 | 8:+313442 | None:intergenic |
| ACAAAGAATGTTTGATGGTA+AGG | 0.389012 | 8:-313023 | MsG0880041858.01.T01:CDS |
| ACACCTCTACTCATATCTAT+TGG | 0.391628 | 8:-313618 | MsG0880041858.01.T01:CDS |
| AAAGGGCTATGGGTACATTA+AGG | 0.398169 | 8:-312545 | MsG0880041858.01.T01:CDS |
| CTGGGATGTTAATTATTTGT+TGG | 0.398663 | 8:+313724 | None:intergenic |
| AGAAGCGATTGTGCACGATC+TGG | 0.411882 | 8:-312685 | MsG0880041858.01.T01:CDS |
| TTGCAAATGTAAGGCTCATC+AGG | 0.412545 | 8:+312771 | None:intergenic |
| AGAAGCAGCTCTACCATAAT+CGG | 0.416698 | 8:-312498 | MsG0880041858.01.T01:CDS |
| ATTGGATTCAGTGTTTATCA+TGG | 0.424010 | 8:-313391 | MsG0880041858.01.T01:CDS |
| ACTACAACAATGAGTGGAAA+AGG | 0.441928 | 8:-312563 | MsG0880041858.01.T01:CDS |
| GAAACATAATTGCAAATGTA+AGG | 0.443461 | 8:+312762 | None:intergenic |
| TATTAAGATCTTCCATAAGT+TGG | 0.453964 | 8:+312589 | None:intergenic |
| CTGAAGATTCCTTGTGATGC+GGG | 0.461765 | 8:+313151 | None:intergenic |
| TTCACCTTCAAAAGAATAGC+AGG | 0.466332 | 8:+313654 | None:intergenic |
| TCAGCTTCCAATTTATGTGT+TGG | 0.470367 | 8:-313262 | MsG0880041858.01.T01:CDS |
| CTTTCGTTGTTATGGTGGAT+AGG | 0.475416 | 8:+313594 | None:intergenic |
| ACCTTGTAGATACAACATTC+AGG | 0.481147 | 8:+313678 | None:intergenic |
| CAATGAGTGGAAAAGGGCTA+TGG | 0.481943 | 8:-312556 | MsG0880041858.01.T01:CDS |
| CAAGTCTTTCGTTGTTATGG+TGG | 0.491319 | 8:+313589 | None:intergenic |
| GACACTGCTCAAAAGCGATT+AGG | 0.499699 | 8:+312799 | None:intergenic |
| GAAGCGATTGTGCACGATCT+GGG | 0.504438 | 8:-312684 | MsG0880041858.01.T01:CDS |
| GATACAACATTCAGGCCAAT+GGG | 0.505047 | 8:+313686 | None:intergenic |
| TAGGTTCCTCAGAACACATT+CGG | 0.513450 | 8:+312818 | None:intergenic |
| GCAACAAAGTTGAATGAAGC+TGG | 0.514234 | 8:-312997 | MsG0880041858.01.T01:intron |
| CTACAACAATGAGTGGAAAA+GGG | 0.516207 | 8:-312562 | MsG0880041858.01.T01:CDS |
| GCCTGAATGTTGTATCTACA+AGG | 0.517588 | 8:-313679 | MsG0880041858.01.T01:CDS |
| TCTGAAGATTCCTTGTGATG+CGG | 0.552760 | 8:+313150 | None:intergenic |
| AGATACAACATTCAGGCCAA+TGG | 0.553377 | 8:+313685 | None:intergenic |
| CTAGGCGGTTCCAAAAGTAA+TGG | 0.566426 | 8:+313535 | None:intergenic |
| GGCTATGGGTACATTAAGGT+GGG | 0.567748 | 8:-312541 | MsG0880041858.01.T01:CDS |
| ATAAACACTACAACAATGAG+TGG | 0.576119 | 8:-312569 | MsG0880041858.01.T01:CDS |
| AATGAGTGGAAAAGGGCTAT+GGG | 0.589763 | 8:-312555 | MsG0880041858.01.T01:CDS |
| ATCTTGCTACCCGCATCACA+AGG | 0.593626 | 8:-313160 | MsG0880041858.01.T01:CDS |
| AAAATATAGAGCCTTCCCAT+TGG | 0.601300 | 8:-313701 | MsG0880041858.01.T01:CDS |
| ATGGTAGAGCTGCTTCTCCA+AGG | 0.609543 | 8:+312504 | None:intergenic |
| CAACATTCAGGCCAATGGGA+AGG | 0.610470 | 8:+313690 | None:intergenic |
| GGGCTATGGGTACATTAAGG+TGG | 0.611450 | 8:-312542 | MsG0880041858.01.T01:CDS |
| CCATAACAACGAAAGACTTG+AGG | 0.623776 | 8:-313586 | MsG0880041858.01.T01:CDS |
| CAAGACTCGTTAATTCCTCG+TGG | 0.627767 | 8:+312658 | None:intergenic |
| CAAGAAGCAACAAATCACGT+TGG | 0.635367 | 8:+313289 | None:intergenic |
| TTGTTGGATATGATCTTCAG+CGG | 0.635743 | 8:+313740 | None:intergenic |
| ATGCGACCGAATGTGTTCTG+AGG | 0.661336 | 8:-312824 | MsG0880041858.01.T01:CDS |
| GGTCCAATAGATATGAGTAG+AGG | 0.668562 | 8:+313615 | None:intergenic |
| GCTTTGAAGCACTTGCAACA+CGG | 0.686234 | 8:+312879 | None:intergenic |
| GCACGATCTGGGAAGCCACG+AGG | 0.704430 | 8:-312673 | MsG0880041858.01.T01:CDS |
| TATTCACACCAAAGAAGACG+CGG | 0.723208 | 8:-312724 | MsG0880041858.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAAGAGAAAACAAAAAAT+GGG | - | Chr8:312826-312845 | MsG0880041858.01.T01:CDS | 20.0% |
| !!! | ACTGATTTTTTAGTTTCATA+GGG | + | Chr8:313132-313151 | None:intergenic | 20.0% |
| !!! | ATAGATATTTCCATTACTTT+TGG | - | Chr8:312642-312661 | MsG0880041858.01.T01:CDS | 20.0% |
| !!! | TACTGATTTTTTAGTTTCAT+AGG | + | Chr8:313133-313152 | None:intergenic | 20.0% |
| !!! | TTCTAAGAGAAAACAAAAAA+TGG | - | Chr8:312825-312844 | MsG0880041858.01.T01:CDS | 20.0% |
| ! | AAAAAAAACCTTTGTTGAGT+TGG | - | Chr8:313264-313283 | MsG0880041858.01.T01:CDS | 25.0% |
| ! | GAAACATAATTGCAAATGTA+AGG | + | Chr8:313428-313447 | None:intergenic | 25.0% |
| ! | TATTAAGATCTTCCATAAGT+TGG | + | Chr8:313601-313620 | None:intergenic | 25.0% |
| ! | TTCAAACTTTATGTCAAGTA+AGG | + | Chr8:313245-313264 | None:intergenic | 25.0% |
| !! | AGTTTTTCCAACACATAAAT+TGG | + | Chr8:312935-312954 | None:intergenic | 25.0% |
| !! | ATTTGTTGACATGATACTAT+TGG | - | Chr8:312778-312797 | MsG0880041858.01.T01:CDS | 25.0% |
| !! | TGATATCTGTGAATTTCTTT+TGG | + | Chr8:312748-312767 | None:intergenic | 25.0% |
| !! | TTTTCACAAAGAATGTTTGA+TGG | - | Chr8:313159-313178 | MsG0880041858.01.T01:CDS | 25.0% |
| !!! | CATGATCTACTTTTAATTGT+GGG | + | Chr8:313346-313365 | None:intergenic | 25.0% |
| !!! | TATTTTGCTCTTGTTTTTGA+AGG | + | Chr8:312712-312731 | None:intergenic | 25.0% |
| !!! | TGAAATCACTTTTTTTGTCT+AGG | + | Chr8:312673-312692 | None:intergenic | 25.0% |
| !!! | TGAATTTCTTTTGGTAACAT+CGG | + | Chr8:312739-312758 | None:intergenic | 25.0% |
| ATAAACACTACAACAATGAG+TGG | - | Chr8:313618-313637 | MsG0880041858.01.T01:CDS | 30.0% | |
| ATTGGATTCAGTGTTTATCA+TGG | - | Chr8:312796-312815 | MsG0880041858.01.T01:CDS | 30.0% | |
| CTGGGATGTTAATTATTTGT+TGG | + | Chr8:312466-312485 | None:intergenic | 30.0% | |
| TAGAACAACTATTCCGATTA+TGG | + | Chr8:313705-313724 | None:intergenic | 30.0% | |
| ! | ACAAAGAATGTTTGATGGTA+AGG | - | Chr8:313164-313183 | MsG0880041858.01.T01:CDS | 30.0% |
| ! | ATCTTCAGAAAGACATTTTG+AGG | - | Chr8:313051-313070 | MsG0880041858.01.T01:CDS | 30.0% |
| !! | GCATGATCTACTTTTAATTG+TGG | + | Chr8:313347-313366 | None:intergenic | 30.0% |
| !! | TATTCTTTTGAAGGTGAAAG+AGG | - | Chr8:312538-312557 | MsG0880041858.01.T01:CDS | 30.0% |
| !! | TTGAGTTGGTTTCTTTGTTT+AGG | - | Chr8:313278-313297 | MsG0880041858.01.T01:CDS | 30.0% |
| !!! | AATCACTTTTTTTGTCTAGG+CGG | + | Chr8:312670-312689 | None:intergenic | 30.0% |
| !!! | ACATTTTGAGGCAAAGAAAT+GGG | - | Chr8:313063-313082 | MsG0880041858.01.T01:CDS | 30.0% |
| AAAATATAGAGCCTTCCCAT+TGG | - | Chr8:312486-312505 | MsG0880041858.01.T01:CDS | 35.0% | |
| ACACCTCTACTCATATCTAT+TGG | - | Chr8:312569-312588 | MsG0880041858.01.T01:CDS | 35.0% | |
| ACCTTGTAGATACAACATTC+AGG | + | Chr8:312512-312531 | None:intergenic | 35.0% | |
| ACTACAACAATGAGTGGAAA+AGG | - | Chr8:313624-313643 | MsG0880041858.01.T01:CDS | 35.0% | |
| CAAAGAAACCAACTCAACAA+AGG | + | Chr8:313275-313294 | None:intergenic | 35.0% | |
| CTACAACAATGAGTGGAAAA+GGG | - | Chr8:313625-313644 | MsG0880041858.01.T01:CDS | 35.0% | |
| TCAGCTTCCAATTTATGTGT+TGG | - | Chr8:312925-312944 | MsG0880041858.01.T01:intron | 35.0% | |
| TTCACCTTCAAAAGAATAGC+AGG | + | Chr8:312536-312555 | None:intergenic | 35.0% | |
| TTGTTGGATATGATCTTCAG+CGG | + | Chr8:312450-312469 | None:intergenic | 35.0% | |
| ! | GCAATGTCAAAAAGCACAAT+TGG | - | Chr8:312975-312994 | MsG0880041858.01.T01:intron | 35.0% |
| ! | GTCGTGTTATTACCAACTTA+TGG | - | Chr8:313586-313605 | MsG0880041858.01.T01:CDS | 35.0% |
| !! | TGTGCTTTTTGACATTGCTT+GGG | + | Chr8:312973-312992 | None:intergenic | 35.0% |
| !! | TTGTGCTTTTTGACATTGCT+TGG | + | Chr8:312974-312993 | None:intergenic | 35.0% |
| !! | TTTAATTTTCGTCGCGTTGT+TGG | - | Chr8:313737-313756 | MsG0880041858.01.T01:CDS | 35.0% |
| !!! | GACATTTTGAGGCAAAGAAA+TGG | - | Chr8:313062-313081 | MsG0880041858.01.T01:CDS | 35.0% |
| AAAGGGCTATGGGTACATTA+AGG | - | Chr8:313642-313661 | MsG0880041858.01.T01:CDS | 40.0% | |
| AATGAGTGGAAAAGGGCTAT+GGG | - | Chr8:313632-313651 | MsG0880041858.01.T01:CDS | 40.0% | |
| AGAAGCAGCTCTACCATAAT+CGG | - | Chr8:313689-313708 | MsG0880041858.01.T01:CDS | 40.0% | |
| AGATACAACATTCAGGCCAA+TGG | + | Chr8:312505-312524 | None:intergenic | 40.0% | |
| CAAGAAGCAACAAATCACGT+TGG | + | Chr8:312901-312920 | None:intergenic | 40.0% | |
| CAAGTCTTTCGTTGTTATGG+TGG | + | Chr8:312601-312620 | None:intergenic | 40.0% | |
| CCATAACAACGAAAGACTTG+AGG | - | Chr8:312601-312620 | MsG0880041858.01.T01:CDS | 40.0% | |
| CCTCAAGTCTTTCGTTGTTA+TGG | + | Chr8:312604-312623 | None:intergenic | 40.0% | |
| GATACAACATTCAGGCCAAT+GGG | + | Chr8:312504-312523 | None:intergenic | 40.0% | |
| GCAACAAAGTTGAATGAAGC+TGG | - | Chr8:313190-313209 | MsG0880041858.01.T01:CDS | 40.0% | |
| GCCTGAATGTTGTATCTACA+AGG | - | Chr8:312508-312527 | MsG0880041858.01.T01:CDS | 40.0% | |
| GGTCCAATAGATATGAGTAG+AGG | + | Chr8:312575-312594 | None:intergenic | 40.0% | |
| TAGGTTCCTCAGAACACATT+CGG | + | Chr8:313372-313391 | None:intergenic | 40.0% | |
| TATTCACACCAAAGAAGACG+CGG | - | Chr8:313463-313482 | MsG0880041858.01.T01:CDS | 40.0% | |
| TCTGAAGATTCCTTGTGATG+CGG | + | Chr8:313040-313059 | None:intergenic | 40.0% | |
| TTGCAAATGTAAGGCTCATC+AGG | + | Chr8:313419-313438 | None:intergenic | 40.0% | |
| ! | GGGAAGGCTCTATATTTTCT+GGG | + | Chr8:312484-312503 | None:intergenic | 40.0% |
| ! | GGTTCCTGCTATTCTTTTGA+AGG | - | Chr8:312529-312548 | MsG0880041858.01.T01:CDS | 40.0% |
| ! | TGGGAAGGCTCTATATTTTC+TGG | + | Chr8:312485-312504 | None:intergenic | 40.0% |
| !! | AGCTGGTATAAGCTTTGAGA+AGG | - | Chr8:313207-313226 | MsG0880041858.01.T01:CDS | 40.0% |
| !! | CTTTCGTTGTTATGGTGGAT+AGG | + | Chr8:312596-312615 | None:intergenic | 40.0% |
| !! | GGGTTTATTTTCGTGATCCT+TGG | - | Chr8:313666-313685 | MsG0880041858.01.T01:CDS | 40.0% |
| CAAGACTCGTTAATTCCTCG+TGG | + | Chr8:313532-313551 | None:intergenic | 45.0% | |
| CAATGAGTGGAAAAGGGCTA+TGG | - | Chr8:313631-313650 | MsG0880041858.01.T01:CDS | 45.0% | |
| CTAGGCGGTTCCAAAAGTAA+TGG | + | Chr8:312655-312674 | None:intergenic | 45.0% | |
| CTGAAGATTCCTTGTGATGC+GGG | + | Chr8:313039-313058 | None:intergenic | 45.0% | |
| GACACTGCTCAAAAGCGATT+AGG | + | Chr8:313391-313410 | None:intergenic | 45.0% | |
| GGCTATGGGTACATTAAGGT+GGG | - | Chr8:313646-313665 | MsG0880041858.01.T01:CDS | 45.0% | |
| !! | GCTTTGAAGCACTTGCAACA+CGG | + | Chr8:313311-313330 | None:intergenic | 45.0% |
| AGAAGCGATTGTGCACGATC+TGG | - | Chr8:313502-313521 | MsG0880041858.01.T01:CDS | 50.0% | |
| ATCTTGCTACCCGCATCACA+AGG | - | Chr8:313027-313046 | MsG0880041858.01.T01:CDS | 50.0% | |
| ATGCGACCGAATGTGTTCTG+AGG | - | Chr8:313363-313382 | MsG0880041858.01.T01:CDS | 50.0% | |
| ATGGTAGAGCTGCTTCTCCA+AGG | + | Chr8:313686-313705 | None:intergenic | 50.0% | |
| CAACATTCAGGCCAATGGGA+AGG | + | Chr8:312500-312519 | None:intergenic | 50.0% | |
| GAAGCGATTGTGCACGATCT+GGG | - | Chr8:313503-313522 | MsG0880041858.01.T01:CDS | 50.0% | |
| GGGCTATGGGTACATTAAGG+TGG | - | Chr8:313645-313664 | MsG0880041858.01.T01:CDS | 50.0% | |
| TAGCAACTCCGCGTCTTCTT+TGG | + | Chr8:313474-313493 | None:intergenic | 50.0% | |
| GCACGATCTGGGAAGCCACG+AGG | - | Chr8:313514-313533 | MsG0880041858.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 312437 | 313772 | 312437 | ID=MsG0880041858.01;Name=MsG0880041858.01 |
| Chr8 | mRNA | 312437 | 313772 | 312437 | ID=MsG0880041858.01.T01;Parent=MsG0880041858.01;Name=MsG0880041858.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|2|0|415 |
| Chr8 | exon | 312998 | 313772 | 312998 | ID=MsG0880041858.01.T01:exon:229;Parent=MsG0880041858.01.T01 |
| Chr8 | exon | 312437 | 312909 | 312437 | ID=MsG0880041858.01.T01:exon:230;Parent=MsG0880041858.01.T01 |
| Chr8 | CDS | 312998 | 313772 | 312998 | ID=MsG0880041858.01.T01:cds;Parent=MsG0880041858.01.T01 |
| Chr8 | CDS | 312437 | 312909 | 312437 | ID=MsG0880041858.01.T01:cds;Parent=MsG0880041858.01.T01 |
| Gene Sequence |
| Protein sequence |
