AlfalfaGEDB | MsG0680030652.01

M. sativa cultivar ZhongmuNo.1 / MsG0680030652.01

KEGG: -
GO: GO:0016020 GO:0022857 GO:0055085
PFAM: PF00854

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030652.01.T01	XP_003618370.2	98.913	184	2	0	1	184	358	541	7.28E-125	372

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030652.01.T01	Q9LFR1	64.865	185	61	2	1	184	365	546	1.74E-80	251

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030652.01.T01	G7KJG0	98.913	184	2	0	1	184	358	541	3.48e-125	372

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0480020322.01	MsG0680030652.01	0.803187	3.928466e-49	1.961502e-46
MsG0580025827.01	MsG0680030652.01	0.818938	1.509546e-52	1.145810e-49
MsG0680030652.01	MsG0680030653.01	0.853661	2.061884e-61	4.488206e-58
MsG0680030652.01	MsG0680030654.01	0.830218	3.323413e-55	3.479436e-52
MsG0680030652.01	MsG0880045285.01	0.803363	3.612750e-49	1.811890e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030652.01.T01	MTR_6g008690	98.913	184	2	0	1	184	358	541	8.82e-129	372
MsG0680030652.01.T01	MTR_4g033385	48.352	182	87	3	2	179	275	453	1.58e-57	187
MsG0680030652.01.T01	MTR_0294s0020	46.927	179	94	1	2	179	372	550	3.09e-56	186
MsG0680030652.01.T01	MTR_4g033325	47.514	181	88	3	3	179	249	426	4.51e-56	182
MsG0680030652.01.T01	MTR_4g033325	47.514	181	88	3	3	179	275	452	7.17e-56	182
MsG0680030652.01.T01	MTR_4g033310	46.703	182	96	1	2	182	310	491	1.31e-55	183
MsG0680030652.01.T01	MTR_4g033315	46.703	182	96	1	2	182	374	555	5.22e-55	182
MsG0680030652.01.T01	MTR_4g033310	46.703	182	96	1	2	182	374	555	5.22e-55	182
MsG0680030652.01.T01	MTR_4g033325	47.514	181	88	3	3	179	373	550	5.61e-55	182
MsG0680030652.01.T01	MTR_3g005010	44.505	182	101	0	1	182	365	546	1.95e-53	178
MsG0680030652.01.T01	MTR_3g014790	45.699	186	96	3	1	183	368	551	3.84e-53	177
MsG0680030652.01.T01	MTR_8g038880	45.455	187	94	4	1	183	373	555	2.43e-51	173
MsG0680030652.01.T01	MTR_4g019580	43.407	182	98	2	3	184	398	574	2.55e-50	171
MsG0680030652.01.T01	MTR_3g069500	45.000	180	88	2	1	180	393	561	2.63e-50	171
MsG0680030652.01.T01	MTR_7g065080	43.258	178	90	2	3	180	306	472	4.17e-50	168
MsG0680030652.01.T01	MTR_4g033330	46.250	160	86	0	2	161	374	533	8.64e-50	168
MsG0680030652.01.T01	MTR_3g069440	44.444	180	99	1	1	180	391	569	8.93e-50	169
MsG0680030652.01.T01	MTR_7g065080	43.820	178	89	3	3	180	393	559	1.37e-49	169
MsG0680030652.01.T01	MTR_3g069420	43.169	183	97	3	1	180	392	570	4.54e-48	165
MsG0680030652.01.T01	MTR_4g015080	43.017	179	100	1	2	180	396	572	6.95e-46	159
MsG0680030652.01.T01	MTR_7g067010	40.223	179	105	1	2	180	386	562	5.78e-45	156
MsG0680030652.01.T01	MTR_3g072300	40.659	182	107	1	1	182	384	564	8.68e-43	150
MsG0680030652.01.T01	MTR_7g098230	36.723	177	110	2	3	178	389	564	4.65e-41	145
MsG0680030652.01.T01	MTR_3g462710	37.017	181	111	2	1	180	278	456	4.95e-41	144
MsG0680030652.01.T01	MTR_3g462710	37.017	181	111	2	1	180	387	565	1.85e-40	144
MsG0680030652.01.T01	MTR_5g012290	38.587	184	105	3	1	181	394	572	1.93e-40	144
MsG0680030652.01.T01	MTR_4g033395	52.381	126	54	2	2	124	376	498	2.14e-40	143
MsG0680030652.01.T01	MTR_7g088825	39.548	177	103	3	3	178	390	563	2.66e-40	144
MsG0680030652.01.T01	MTR_5g038060	36.066	183	114	1	1	183	402	581	4.04e-40	143
MsG0680030652.01.T01	MTR_7g098220	36.612	183	114	2	3	184	349	530	8.17e-40	142
MsG0680030652.01.T01	MTR_7g098220	36.612	183	114	2	3	184	393	574	1.46e-39	142
MsG0680030652.01.T01	MTR_7g098040	38.547	179	104	3	3	178	397	572	1.86e-39	142
MsG0680030652.01.T01	MTR_4g033375	52.419	124	53	2	2	122	376	496	2.17e-39	140
MsG0680030652.01.T01	MTR_7g088790	37.500	176	106	3	3	177	397	569	2.50e-39	141
MsG0680030652.01.T01	MTR_7g098200	36.723	177	110	2	3	178	278	453	3.03e-39	139
MsG0680030652.01.T01	MTR_5g012270	38.043	184	106	3	1	181	396	574	3.74e-39	140
MsG0680030652.01.T01	MTR_4g101380	40.678	177	102	2	1	177	397	570	8.41e-39	139
MsG0680030652.01.T01	MTR_7g098200	36.723	177	110	2	3	178	392	567	1.62e-38	139
MsG0680030652.01.T01	MTR_7g098200	36.723	177	110	2	3	178	382	557	1.74e-38	139
MsG0680030652.01.T01	MTR_4g107530	36.364	187	116	2	1	184	401	587	3.17e-38	138
MsG0680030652.01.T01	MTR_5g055000	36.788	193	108	4	3	184	383	572	3.64e-38	138
MsG0680030652.01.T01	MTR_7g098180	36.612	183	114	2	3	184	395	576	4.11e-38	138
MsG0680030652.01.T01	MTR_1g075440	36.757	185	111	3	3	184	391	572	7.21e-38	137
MsG0680030652.01.T01	MTR_7g098090	37.288	177	109	2	3	178	401	576	2.08e-37	136
MsG0680030652.01.T01	MTR_8g469310	39.535	172	97	3	2	169	393	561	2.28e-37	135
MsG0680030652.01.T01	MTR_4g107580	35.829	187	117	2	1	184	393	579	3.85e-37	135
MsG0680030652.01.T01	MTR_7g088820	36.364	176	108	3	3	177	283	455	1.70e-36	132
MsG0680030652.01.T01	MTR_7g098160	37.288	177	109	2	3	178	396	571	1.70e-36	133
MsG0680030652.01.T01	MTR_3g112470	36.813	182	104	3	1	182	384	554	2.63e-36	132
MsG0680030652.01.T01	MTR_5g038380	37.278	169	101	2	2	169	400	564	2.73e-36	132
MsG0680030652.01.T01	MTR_7g088820	36.364	176	108	3	3	177	331	503	2.75e-36	132
MsG0680030652.01.T01	MTR_8g103233	36.264	182	109	3	3	181	380	557	3.72e-36	132
MsG0680030652.01.T01	MTR_7g088820	36.364	176	108	3	3	177	393	565	4.82e-36	132
MsG0680030652.01.T01	MTR_3g112460	36.264	182	105	3	1	182	384	554	1.16e-35	131
MsG0680030652.01.T01	MTR_4g107670	36.216	185	112	3	2	183	394	575	1.48e-35	130
MsG0680030652.01.T01	MTR_4g107510	33.146	178	117	1	1	176	404	581	2.70e-35	130
MsG0680030652.01.T01	MTR_8g469470	34.066	182	117	1	1	182	406	584	3.54e-35	129
MsG0680030652.01.T01	MTR_2g005130	38.919	185	102	4	1	182	391	567	3.79e-35	129
MsG0680030652.01.T01	MTR_7g111260	37.766	188	105	4	1	184	372	551	1.04e-34	128
MsG0680030652.01.T01	MTR_8g469480	31.285	179	120	1	1	179	409	584	1.25e-34	128
MsG0680030652.01.T01	MTR_1g085090	36.702	188	107	4	1	184	372	551	2.49e-34	127
MsG0680030652.01.T01	MTR_2g101610	36.158	177	106	3	4	177	394	566	1.21e-33	125
MsG0680030652.01.T01	MTR_2g101590	36.158	177	106	3	4	177	393	565	1.47e-33	125
MsG0680030652.01.T01	MTR_2g101650	32.432	185	118	3	3	184	390	570	5.53e-33	124
MsG0680030652.01.T01	MTR_7g005930	32.759	174	111	2	3	176	399	566	9.33e-33	123
MsG0680030652.01.T01	MTR_4g098800	35.593	177	106	2	3	178	405	574	1.19e-32	122
MsG0680030652.01.T01	MTR_4g098800	35.593	177	106	2	3	178	470	639	1.36e-32	122
MsG0680030652.01.T01	MTR_4g011280	35.359	181	110	3	3	180	396	572	1.60e-32	122
MsG0680030652.01.T01	MTR_5g085850	32.620	187	109	4	3	184	392	566	3.37e-32	121
MsG0680030652.01.T01	MTR_4g123537	34.783	184	110	3	1	181	396	572	3.51e-32	121
MsG0680030652.01.T01	MTR_3g112450	36.313	179	105	2	1	179	385	554	5.08e-32	120
MsG0680030652.01.T01	MTR_5g014150	35.429	175	110	2	3	176	413	585	7.23e-32	120
MsG0680030652.01.T01	MTR_4g024930	34.857	175	108	3	3	176	383	552	1.02e-31	120
MsG0680030652.01.T01	MTR_5g038190	33.146	178	115	2	1	177	393	567	3.20e-31	119
MsG0680030652.01.T01	MTR_1g041835	36.216	185	112	3	3	184	389	570	7.34e-31	117
MsG0680030652.01.T01	MTR_2g101560	34.483	174	113	1	4	177	394	566	1.47e-30	117
MsG0680030652.01.T01	MTR_0236s0050	36.517	178	104	3	3	180	328	496	1.50e-30	116
MsG0680030652.01.T01	MTR_1g041875	30.726	179	116	1	3	181	392	562	1.89e-30	116
MsG0680030652.01.T01	MTR_1g042310	31.892	185	120	3	3	184	352	533	2.60e-30	116
MsG0680030652.01.T01	MTR_1g042310	31.892	185	120	3	3	184	345	526	2.74e-30	115
MsG0680030652.01.T01	MTR_1g042310	31.892	185	120	3	3	184	389	570	3.44e-30	115
MsG0680030652.01.T01	MTR_1g057460	35.955	178	105	3	3	180	328	496	5.36e-30	114
MsG0680030652.01.T01	MTR_1g057460	35.955	178	105	3	3	180	399	567	6.02e-30	115
MsG0680030652.01.T01	MTR_7g010820	36.364	176	110	2	3	176	393	568	7.75e-30	115
MsG0680030652.01.T01	MTR_1g041815	35.135	185	114	3	3	184	389	570	9.37e-30	114
MsG0680030652.01.T01	MTR_4g114340	31.492	181	119	3	1	181	385	560	1.18e-29	114
MsG0680030652.01.T01	MTR_7g013270	31.609	174	113	2	3	176	456	623	2.13e-29	114
MsG0680030652.01.T01	MTR_3g100980	35.484	186	109	4	1	183	377	554	7.07e-29	112
MsG0680030652.01.T01	MTR_3g100980	35.484	186	109	4	1	183	405	582	7.21e-29	112
MsG0680030652.01.T01	MTR_1g041885	33.125	160	99	1	3	162	345	496	1.78e-28	110
MsG0680030652.01.T01	MTR_2g017750	30.168	179	122	2	1	176	407	585	4.60e-28	110
MsG0680030652.01.T01	MTR_2g101640	34.270	178	110	3	3	177	389	562	5.80e-28	109
MsG0680030652.01.T01	MTR_8g087780	35.099	151	95	2	1	148	392	542	3.96e-27	107
MsG0680030652.01.T01	MTR_8g087810	34.416	154	92	3	1	148	393	543	7.13e-27	106
MsG0680030652.01.T01	MTR_1g116930	28.977	176	115	2	3	176	387	554	1.76e-26	105
MsG0680030652.01.T01	MTR_7g006540	32.370	173	112	3	1	169	431	602	7.32e-26	103
MsG0680030652.01.T01	MTR_7g064780	29.609	179	116	3	3	178	398	569	2.85e-25	102
MsG0680030652.01.T01	MTR_1g009200	33.523	176	117	0	1	176	389	564	5.41e-25	101
MsG0680030652.01.T01	MTR_3g065350	43.396	106	53	1	1	106	55	153	8.21e-25	95.1
MsG0680030652.01.T01	MTR_2g093640	31.609	174	101	4	5	178	390	545	2.40e-24	99.4
MsG0680030652.01.T01	MTR_1g026750	31.609	174	119	0	3	176	381	554	3.98e-24	98.6
MsG0680030652.01.T01	MTR_7g098210	31.073	177	105	4	3	178	282	442	4.02e-24	98.2
MsG0680030652.01.T01	MTR_4g107610	30.899	178	112	4	3	176	399	569	7.76e-24	97.8
MsG0680030652.01.T01	MTR_4g033390	45.055	91	49	1	94	183	30	120	4.05e-23	89.4
MsG0680030652.01.T01	MTR_2g093180	31.034	174	102	4	5	178	391	546	8.39e-23	95.1
MsG0680030652.01.T01	MTR_1g026770	33.520	179	109	3	3	176	377	550	1.31e-22	94.4
MsG0680030652.01.T01	MTR_1g026740	33.750	160	98	3	3	158	380	535	2.65e-22	93.6
MsG0680030652.01.T01	MTR_2g093160	30.460	174	104	4	5	178	389	545	3.13e-22	93.2
MsG0680030652.01.T01	MTR_7g051880	38.411	151	82	3	27	176	385	525	1.32e-21	91.7
MsG0680030652.01.T01	MTR_7g052600	37.086	151	84	3	27	176	385	525	1.16e-20	89.0
MsG0680030652.01.T01	MTR_7g051830	37.086	151	84	3	27	176	385	525	1.95e-20	88.2
MsG0680030652.01.T01	MTR_7g064800	29.379	177	115	3	3	176	400	569	9.69e-20	86.3
MsG0680030652.01.T01	MTR_1g009170	31.250	160	104	2	1	160	206	359	1.15e-19	85.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030652.01.T01	AT5G14940	64.865	185	61	2	1	184	365	546	1.78e-81	251
MsG0680030652.01.T01	AT3G01350	65.405	185	60	3	1	183	371	553	1.28e-71	226
MsG0680030652.01.T01	AT1G72140	50.811	185	84	3	1	181	374	555	2.00e-61	199
MsG0680030652.01.T01	AT1G22540	48.045	179	93	0	1	179	374	552	1.04e-56	187
MsG0680030652.01.T01	AT1G72130	44.809	183	93	2	1	182	244	419	4.40e-55	180
MsG0680030652.01.T01	AT1G72130	44.809	183	93	2	1	182	244	419	4.40e-55	180
MsG0680030652.01.T01	AT1G72130	44.809	183	93	2	1	182	362	537	4.73e-54	180
MsG0680030652.01.T01	AT3G54450	44.385	187	97	3	1	184	365	547	5.61e-52	174
MsG0680030652.01.T01	AT1G22550	44.886	176	97	0	1	176	381	556	1.06e-50	171
MsG0680030652.01.T01	AT1G72120	46.927	179	89	2	1	176	374	549	7.82e-50	169
MsG0680030652.01.T01	AT1G72125	43.575	179	95	2	1	176	378	553	8.98e-47	161
MsG0680030652.01.T01	AT2G37900	39.674	184	102	1	1	184	318	492	1.22e-45	157
MsG0680030652.01.T01	AT3G53960	39.326	178	104	1	3	180	401	574	2.62e-45	157
MsG0680030652.01.T01	AT2G37900	39.674	184	102	1	1	184	397	571	3.30e-45	157
MsG0680030652.01.T01	AT1G22570	46.250	160	77	3	1	157	348	501	1.31e-43	152
MsG0680030652.01.T01	AT1G22570	46.250	160	77	3	1	157	385	538	1.99e-43	152
MsG0680030652.01.T01	AT1G27040	40.678	177	100	2	2	176	353	526	2.18e-42	149
MsG0680030652.01.T01	AT1G27040	40.678	177	100	2	2	176	381	554	3.02e-42	149
MsG0680030652.01.T01	AT1G27040	40.678	177	100	2	2	176	385	558	3.57e-42	149
MsG0680030652.01.T01	AT5G01180	37.297	185	111	3	2	184	388	569	1.04e-41	147
MsG0680030652.01.T01	AT5G01180	37.297	185	111	3	2	184	388	569	1.04e-41	147
MsG0680030652.01.T01	AT5G01180	37.297	185	111	3	2	184	388	569	1.04e-41	147
MsG0680030652.01.T01	AT2G40460	37.500	184	114	1	1	184	378	560	2.95e-40	144
MsG0680030652.01.T01	AT3G54140	38.333	180	108	2	2	180	388	565	2.80e-39	140
MsG0680030652.01.T01	AT3G54140	38.333	180	108	2	2	180	388	565	2.80e-39	140
MsG0680030652.01.T01	AT1G62200	39.106	179	100	1	1	179	418	587	6.68e-39	140
MsG0680030652.01.T01	AT1G62200	39.106	179	100	1	1	179	461	630	9.51e-39	140
MsG0680030652.01.T01	AT1G68570	39.227	181	103	3	3	179	361	538	1.00e-38	139
MsG0680030652.01.T01	AT1G62200	39.106	179	100	1	1	179	447	616	1.06e-38	139
MsG0680030652.01.T01	AT1G68570	39.227	181	103	3	3	179	391	568	1.20e-38	139
MsG0680030652.01.T01	AT2G02040	38.043	184	109	2	1	182	404	584	2.67e-38	138
MsG0680030652.01.T01	AT1G69850	36.364	187	112	4	2	184	402	585	1.52e-37	136
MsG0680030652.01.T01	AT1G69870	34.807	181	111	3	1	179	419	594	4.46e-36	132
MsG0680030652.01.T01	AT1G33440	36.667	180	102	3	1	176	396	567	8.33e-35	129
MsG0680030652.01.T01	AT1G69860	34.426	183	110	3	1	183	381	553	1.18e-33	125
MsG0680030652.01.T01	AT2G26690	34.783	184	114	2	1	184	341	518	1.23e-33	125
MsG0680030652.01.T01	AT2G26690	34.783	184	114	2	1	184	353	530	1.41e-33	125
MsG0680030652.01.T01	AT2G26690	34.807	181	111	3	1	181	386	559	1.72e-33	125
MsG0680030652.01.T01	AT5G46050	34.946	186	113	4	3	184	277	458	5.33e-33	122
MsG0680030652.01.T01	AT1G12110	35.196	179	111	3	3	181	398	571	6.03e-33	123
MsG0680030652.01.T01	AT1G32450	38.286	175	105	2	3	176	409	581	7.04e-33	123
MsG0680030652.01.T01	AT5G46050	34.946	186	113	4	3	184	389	570	2.26e-32	122
MsG0680030652.01.T01	AT1G18880	33.333	183	119	1	1	180	385	567	9.29e-32	120
MsG0680030652.01.T01	AT2G02020	37.705	183	104	6	1	179	368	544	1.08e-31	120
MsG0680030652.01.T01	AT2G02020	37.705	183	104	6	1	179	347	523	1.14e-31	119
MsG0680030652.01.T01	AT1G52190	35.955	178	107	3	3	177	393	566	5.37e-31	118
MsG0680030652.01.T01	AT5G46040	35.754	179	114	1	3	181	389	566	8.23e-31	117
MsG0680030652.01.T01	AT3G21670	35.196	179	104	2	3	181	394	560	1.09e-30	117
MsG0680030652.01.T01	AT1G59740	35.484	186	110	4	1	184	405	582	1.53e-30	117
MsG0680030652.01.T01	AT5G62730	34.054	185	117	2	2	181	403	587	1.57e-30	117
MsG0680030652.01.T01	AT5G62730	34.054	185	117	2	2	181	344	528	1.62e-30	116
MsG0680030652.01.T01	AT3G47960	28.804	184	128	1	3	183	429	612	5.26e-30	115
MsG0680030652.01.T01	AT3G16180	33.898	177	111	4	3	177	393	565	1.01e-29	114
MsG0680030652.01.T01	AT4G21680	35.714	182	113	4	4	182	397	577	7.41e-29	112
MsG0680030652.01.T01	AT5G62680	28.261	184	129	1	3	183	413	596	1.10e-28	112
MsG0680030652.01.T01	AT5G13400	33.514	185	121	2	1	183	432	616	1.67e-28	111
MsG0680030652.01.T01	AT5G19640	33.129	163	98	3	25	184	435	589	1.96e-28	111
MsG0680030652.01.T01	AT1G27080	30.220	182	116	3	1	182	339	509	2.30e-26	105
MsG0680030652.01.T01	AT1G27080	30.055	183	117	3	1	183	381	552	2.78e-26	105
MsG0680030652.01.T01	AT5G28470	31.319	182	118	4	1	181	383	558	1.60e-25	102
MsG0680030652.01.T01	AT3G45720	32.768	177	99	6	10	184	388	546	1.76e-25	102
MsG0680030652.01.T01	AT3G45650	32.948	173	106	4	5	177	378	540	1.16e-24	100
MsG0680030652.01.T01	AT3G25260	36.184	152	83	3	25	176	378	515	6.75e-24	98.2
MsG0680030652.01.T01	AT3G45660	32.184	174	108	4	5	178	377	540	1.06e-23	97.4
MsG0680030652.01.T01	AT3G45660	32.184	174	108	4	5	178	377	540	1.06e-23	97.4
MsG0680030652.01.T01	AT3G45660	32.184	174	108	4	5	178	398	561	1.29e-23	97.4
MsG0680030652.01.T01	AT5G11570	34.078	179	106	3	3	181	314	480	5.86e-23	95.1
MsG0680030652.01.T01	AT5G28470	31.111	180	115	5	3	181	385	556	8.73e-23	95.1
MsG0680030652.01.T01	AT3G45680	31.395	172	95	4	19	183	397	552	2.58e-22	93.6
MsG0680030652.01.T01	AT3G45710	30.380	158	95	4	20	177	399	541	4.99e-21	90.1
MsG0680030652.01.T01	AT3G25280	32.895	152	94	1	25	176	378	521	5.70e-21	89.7
MsG0680030652.01.T01	AT2G38100	34.591	159	87	4	30	183	345	491	6.72e-21	89.4
MsG0680030652.01.T01	AT2G38100	34.591	159	87	4	30	183	361	507	8.82e-21	89.4
MsG0680030652.01.T01	AT2G38100	34.591	159	87	4	30	183	367	513	1.04e-20	89.0
MsG0680030652.01.T01	AT3G45650	29.648	199	104	6	5	177	378	566	1.04e-19	86.3
MsG0680030652.01.T01	AT3G45700	30.357	168	99	5	10	177	380	529	4.46e-19	84.3

Find 25 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTACCACAGTACATTCTTCT+TGG	0.292712	6:-6639431	MsG0680030652.01.T01:CDS
AACAACCAGAAAATGCTTAT+TGG	0.321275	6:+6639452	None:intergenic
CTGATAACACGACAGGAAAA+AGG	0.335435	6:-6639611	MsG0680030652.01.T01:CDS
ATCCTTCACTTCTCATTTGT+CGG	0.356684	6:+6639492	None:intergenic
CCCATTGTTCTCATATTCTT+CGG	0.361859	6:+6639353	None:intergenic
CACGTTTGGATAATTACTAT+TGG	0.386424	6:-6639205	MsG0680030652.01.T01:CDS
TGATATGGTCGAGGCACGTT+TGG	0.450686	6:-6639219	MsG0680030652.01.T01:CDS
ATTACTATTGGCTTCTAGCT+TGG	0.455302	6:-6639193	MsG0680030652.01.T01:CDS
GAAGTATACACAAGTTCAAA+AGG	0.460982	6:-6639263	MsG0680030652.01.T01:CDS
CCGAAGAATATGAGAACAAT+GGG	0.466258	6:-6639353	MsG0680030652.01.T01:CDS
GAAATGAAACGCCTTGCTAT+CGG	0.504880	6:-6639515	MsG0680030652.01.T01:CDS
GTGATGCAAAGGATGGGAAT+CGG	0.543695	6:-6639581	MsG0680030652.01.T01:CDS
CGCTCAGCTGATAACACGAC+AGG	0.545338	6:-6639618	MsG0680030652.01.T01:CDS
TATAAACGTGATGCAAAGGA+TGG	0.549790	6:-6639588	MsG0680030652.01.T01:CDS
TCATTTGTCGGCCGATAGCA+AGG	0.551787	6:+6639504	None:intergenic
GGCCGACAAATGAGAAGTGA+AGG	0.560082	6:-6639494	MsG0680030652.01.T01:CDS
CGTGTTATCAGCTGAGCGAA+CGG	0.563262	6:+6639623	None:intergenic
GTTCAAAAGGAACTCCAAGT+TGG	0.566715	6:-6639250	MsG0680030652.01.T01:CDS
AAGGTATAAACGTGATGCAA+AGG	0.571082	6:-6639592	MsG0680030652.01.T01:CDS
TCCGAAGAATATGAGAACAA+TGG	0.585411	6:-6639354	MsG0680030652.01.T01:CDS
GCAAAGGATGGGAATCGGAA+TGG	0.605289	6:-6639576	MsG0680030652.01.T01:CDS
ATATCATCAGAAAACCAACT+TGG	0.615024	6:+6639236	None:intergenic
ATAAACGTGATGCAAAGGAT+GGG	0.622044	6:-6639587	MsG0680030652.01.T01:CDS
AATCATAGCGATGATTATCG+CGG	0.703876	6:-6639546	MsG0680030652.01.T01:CDS
ATACCAAGAAGAATGTACTG+TGG	0.754580	6:+6639428	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATAAAAACTCTGTCGTATAA+CGG	+	Chr6:6639124-6639143	None:intergenic	25.0%
!!	TATATCAGATATTTTCACAG+TGG	-	Chr6:6639360-6639379	MsG0680030652.01.T01:CDS	25.0%
!!!	GGTATGCAAGAATTTTTTTA+CGG	-	Chr6:6639385-6639404	MsG0680030652.01.T01:CDS	25.0%
	AACAACCAGAAAATGCTTAT+TGG	+	Chr6:6639319-6639338	None:intergenic	30.0%
	ATATCATCAGAAAACCAACT+TGG	+	Chr6:6639535-6639554	None:intergenic	30.0%
	CACGTTTGGATAATTACTAT+TGG	-	Chr6:6639563-6639582	MsG0680030652.01.T01:CDS	30.0%
	GAAGTATACACAAGTTCAAA+AGG	-	Chr6:6639505-6639524	MsG0680030652.01.T01:CDS	30.0%
!	GCATTGTATACAAGTGTTTT+CGG	-	Chr6:6639442-6639461	MsG0680030652.01.T01:CDS	30.0%
!	TAGTACCAATAAGCATTTTC+TGG	-	Chr6:6639311-6639330	MsG0680030652.01.T01:CDS	30.0%
!!!	AAGTTGGTTTTCTGATGATA+TGG	-	Chr6:6639534-6639553	MsG0680030652.01.T01:CDS	30.0%
	AAGGTATAAACGTGATGCAA+AGG	-	Chr6:6639176-6639195	MsG0680030652.01.T01:CDS	35.0%
	AATCATAGCGATGATTATCG+CGG	-	Chr6:6639222-6639241	MsG0680030652.01.T01:CDS	35.0%
	ATAAACGTGATGCAAAGGAT+GGG	-	Chr6:6639181-6639200	MsG0680030652.01.T01:CDS	35.0%
	ATACCAAGAAGAATGTACTG+TGG	+	Chr6:6639343-6639362	None:intergenic	35.0%
	ATCCTTCACTTCTCATTTGT+CGG	+	Chr6:6639279-6639298	None:intergenic	35.0%
	CCCATTGTTCTCATATTCTT+CGG	+	Chr6:6639418-6639437	None:intergenic	35.0%
	CCGAAGAATATGAGAACAAT+GGG	-	Chr6:6639415-6639434	MsG0680030652.01.T01:CDS	35.0%
	TATAAACGTGATGCAAAGGA+TGG	-	Chr6:6639180-6639199	MsG0680030652.01.T01:CDS	35.0%
	TCCGAAGAATATGAGAACAA+TGG	-	Chr6:6639414-6639433	MsG0680030652.01.T01:CDS	35.0%
	TTACCACAGTACATTCTTCT+TGG	-	Chr6:6639337-6639356	MsG0680030652.01.T01:CDS	35.0%
!	TATACAAGTGTTTTCGGAGT+TGG	-	Chr6:6639448-6639467	MsG0680030652.01.T01:CDS	35.0%
!	TCAGATATTTTCACAGTGGT+TGG	-	Chr6:6639364-6639383	MsG0680030652.01.T01:CDS	35.0%
!!	ATTACTATTGGCTTCTAGCT+TGG	-	Chr6:6639575-6639594	MsG0680030652.01.T01:CDS	35.0%
	CTGATAACACGACAGGAAAA+AGG	-	Chr6:6639157-6639176	MsG0680030652.01.T01:CDS	40.0%
	GTTCAAAAGGAACTCCAAGT+TGG	-	Chr6:6639518-6639537	MsG0680030652.01.T01:CDS	40.0%
!	GAAATGAAACGCCTTGCTAT+CGG	-	Chr6:6639253-6639272	MsG0680030652.01.T01:CDS	40.0%
!	GTTTTCTGATGATATGGTCG+AGG	-	Chr6:6639540-6639559	MsG0680030652.01.T01:CDS	40.0%
	GTGATGCAAAGGATGGGAAT+CGG	-	Chr6:6639187-6639206	MsG0680030652.01.T01:CDS	45.0%
	CGTGTTATCAGCTGAGCGAA+CGG	+	Chr6:6639148-6639167	None:intergenic	50.0%
	GCAAAGGATGGGAATCGGAA+TGG	-	Chr6:6639192-6639211	MsG0680030652.01.T01:CDS	50.0%
	GGCCGACAAATGAGAAGTGA+AGG	-	Chr6:6639274-6639293	MsG0680030652.01.T01:CDS	50.0%
	TCATTTGTCGGCCGATAGCA+AGG	+	Chr6:6639267-6639286	None:intergenic	50.0%
	TGATATGGTCGAGGCACGTT+TGG	-	Chr6:6639549-6639568	MsG0680030652.01.T01:CDS	50.0%
	CGCTCAGCTGATAACACGAC+AGG	-	Chr6:6639150-6639169	MsG0680030652.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	6639118	6639672	6639118	ID=MsG0680030652.01;Name=MsG0680030652.01
Chr6	mRNA	6639118	6639672	6639118	ID=MsG0680030652.01.T01;Parent=MsG0680030652.01;Name=MsG0680030652.01.T01;_AED=0.44;_eAED=0.44;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|184
Chr6	exon	6639118	6639672	6639118	ID=MsG0680030652.01.T01:exon:6285;Parent=MsG0680030652.01.T01
Chr6	CDS	6639118	6639672	6639118	ID=MsG0680030652.01.T01:cds;Parent=MsG0680030652.01.T01

Gene Sequence

>MsG0680030652.01.T01

ATGCCGTTATACGACAGAGTTTTTATACCGTTCGCTCAGCTGATAACACGACAGGAAAAAGGTATAAACGTGATGCAAAGGATGGGAATCGGAATGGTTCTCTCAATCATAGCGATGATTATCGCGGCACTAGTTGAAATGAAACGCCTTGCTATCGGCCGACAAATGAGAAGTGAAGGATTACTATCAGAAATAGTACCAATAAGCATTTTCTGGTTGTTACCACAGTACATTCTTCTTGGTATATCAGATATTTTCACAGTGGTTGGTATGCAAGAATTTTTTTACGGTGAAGTTCCGAAGAATATGAGAACAATGGGAATCGCATTGTATACAAGTGTTTTCGGAGTTGGAAGCTTTGTTAGTGCATTGATGATTACACTTGTTGAAGTATACACAAGTTCAAAAGGAACTCCAAGTTGGTTTTCTGATGATATGGTCGAGGCACGTTTGGATAATTACTATTGGCTTCTAGCTTGGTTAAGTTCAATTAGCTTATTGTTGTATACACTATTGTGTAAATATTACTATAATAAGAGTGAATCAGATAGTTAA

Protein sequence

>MsG0680030652.01.T01

MPLYDRVFIPFAQLITRQEKGINVMQRMGIGMVLSIIAMIIAALVEMKRLAIGRQMRSEGLLSEIVPISIFWLLPQYILLGISDIFTVVGMQEFFYGEVPKNMRTMGIALYTSVFGVGSFVSALMITLVEVYTSSKGTPSWFSDDMVEARLDNYYWLLAWLSSISLLLYTLLCKYYYNKSESDS*