AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025827.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025827.01.T01 MTR_5g034990 94.631 149 8 0 208 356 204 352 1.89e-83 257
MsG0580025827.01.T01 MTR_1350s0010 34.470 264 82 5 19 207 4 251 5.35e-37 135
MsG0580025827.01.T01 MTR_3g090550 44.667 150 79 2 206 355 195 340 3.14e-36 134
MsG0580025827.01.T01 MTR_4g106720 42.466 146 82 2 210 354 208 352 8.19e-34 128
MsG0580025827.01.T01 MTR_5g034930 37.500 144 88 1 212 355 204 345 6.43e-28 112
MsG0580025827.01.T01 MTR_3g112480 38.462 143 85 1 210 349 102 244 1.13e-27 109
MsG0580025827.01.T01 MTR_5g034980 41.935 124 72 0 210 333 203 326 2.26e-27 110
MsG0580025827.01.T01 MTR_3g112480 38.462 143 85 1 210 349 174 316 3.80e-27 110
MsG0580025827.01.T01 MTR_3g112480 37.415 147 89 1 206 349 225 371 7.14e-27 110
MsG0580025827.01.T01 MTR_5g034910 35.374 147 88 1 210 356 203 342 9.87e-27 108
MsG0580025827.01.T01 MTR_0103s0090 39.073 151 88 2 206 354 111 259 3.18e-25 103
MsG0580025827.01.T01 MTR_6g081840 40.310 129 77 0 209 337 209 337 3.80e-25 104
MsG0580025827.01.T01 MTR_1g023180 39.844 128 77 0 210 337 235 362 1.33e-24 103
MsG0580025827.01.T01 MTR_0103s0090 39.073 151 88 2 206 354 202 350 2.39e-24 102
MsG0580025827.01.T01 MTR_8g092650 38.710 124 76 0 210 333 129 252 1.05e-23 99.0
MsG0580025827.01.T01 MTR_2g027030 37.405 131 82 0 206 336 206 336 3.21e-23 99.4
MsG0580025827.01.T01 MTR_4g129650 35.433 127 81 1 206 332 94 219 4.37e-23 97.1
MsG0580025827.01.T01 MTR_1g074120 33.113 151 100 1 198 347 198 348 6.77e-23 98.6
MsG0580025827.01.T01 MTR_8g092650 38.710 124 76 0 210 333 207 330 9.44e-23 97.8
MsG0580025827.01.T01 MTR_6g007753 38.255 149 90 2 208 355 163 310 2.49e-22 98.6
MsG0580025827.01.T01 MTR_6g007753 38.255 149 90 2 208 355 487 634 2.49e-22 98.6
MsG0580025827.01.T01 MTR_1g014510 36.434 129 82 0 206 334 206 334 3.40e-22 97.4
MsG0580025827.01.T01 MTR_4g129650 36.000 125 79 1 208 332 203 326 5.15e-22 96.3
MsG0580025827.01.T01 MTR_2g007960 31.707 164 105 1 178 334 177 340 5.57e-22 96.3
MsG0580025827.01.T01 MTR_8g006010 36.667 120 76 0 213 332 209 328 2.08e-21 94.7
MsG0580025827.01.T01 MTR_3g072560 41.322 121 71 0 212 332 214 334 2.27e-21 94.7
MsG0580025827.01.T01 MTR_3g095460 39.568 139 81 3 210 347 204 340 2.94e-21 93.6
MsG0580025827.01.T01 MTR_6g007743 36.054 147 94 0 208 354 203 349 5.29e-21 93.2
MsG0580025827.01.T01 MTR_1g037510 34.503 171 79 3 19 163 99 262 7.66e-21 90.9
MsG0580025827.01.T01 MTR_2g007970 35.659 129 83 0 206 334 206 334 8.13e-21 93.2
MsG0580025827.01.T01 MTR_1g057730 30.088 226 101 5 3 205 24 215 9.92e-21 92.0
MsG0580025827.01.T01 MTR_3g072500 36.364 132 79 1 212 338 117 248 1.51e-20 90.9
MsG0580025827.01.T01 MTR_6g036450 36.585 123 78 0 210 332 214 336 3.92e-20 90.9
MsG0580025827.01.T01 MTR_2g007260 32.394 142 94 1 206 347 213 352 5.22e-20 90.9
MsG0580025827.01.T01 MTR_3g072500 36.364 132 79 1 212 338 220 351 5.43e-20 90.5
MsG0580025827.01.T01 MTR_6g007750 35.366 164 95 3 193 355 200 353 5.77e-20 90.1
MsG0580025827.01.T01 MTR_8g006090 33.858 127 84 0 206 332 124 250 5.85e-20 89.0
MsG0580025827.01.T01 MTR_4g094362 36.000 125 80 0 210 334 212 336 1.66e-19 89.0
MsG0580025827.01.T01 MTR_4g094340 33.071 127 85 0 206 332 137 263 2.00e-19 87.4
MsG0580025827.01.T01 MTR_1g074070 34.375 128 83 1 209 335 209 336 2.26e-19 88.6
MsG0580025827.01.T01 MTR_8g006090 33.858 127 84 0 206 332 204 330 2.82e-19 88.2
MsG0580025827.01.T01 MTR_1g038560 32.800 125 84 0 210 334 198 322 2.98e-19 87.8
MsG0580025827.01.T01 MTR_2g065550 32.800 125 84 0 208 332 205 329 3.22e-19 88.2
MsG0580025827.01.T01 MTR_1g051120 33.594 128 84 1 209 335 211 338 5.43e-19 87.4
MsG0580025827.01.T01 MTR_4g094340 33.071 127 85 0 206 332 203 329 5.53e-19 87.4
MsG0580025827.01.T01 MTR_1g114210 31.579 133 89 1 210 340 206 338 6.25e-19 87.0
MsG0580025827.01.T01 MTR_4g094340 33.071 127 85 0 206 332 221 347 7.52e-19 87.0
MsG0580025827.01.T01 MTR_3g072530 42.520 127 70 2 209 332 208 334 1.03e-18 86.7
MsG0580025827.01.T01 MTR_1g030580 36.885 122 77 0 212 333 214 335 1.87e-18 86.3
MsG0580025827.01.T01 MTR_2g007990 34.091 132 81 2 206 334 210 338 2.12e-18 85.9
MsG0580025827.01.T01 MTR_1g074160 34.375 128 83 1 209 335 206 333 2.54e-18 85.5
MsG0580025827.01.T01 MTR_5g021160 32.000 125 85 0 210 334 122 246 3.53e-18 84.0
MsG0580025827.01.T01 MTR_8g006120 32.283 127 86 0 206 332 203 329 6.26e-18 84.3
MsG0580025827.01.T01 MTR_4g094360 32.000 125 85 0 210 334 166 290 6.74e-18 84.0
MsG0580025827.01.T01 MTR_6g007757 39.073 151 87 2 208 355 204 352 9.28e-18 84.0
MsG0580025827.01.T01 MTR_2g102340 34.615 130 84 1 206 334 203 332 1.16e-17 83.6
MsG0580025827.01.T01 MTR_5g021160 32.000 125 85 0 210 334 205 329 1.20e-17 83.6
MsG0580025827.01.T01 MTR_1g073990 36.719 128 80 1 209 335 210 337 1.55e-17 83.2
MsG0580025827.01.T01 MTR_4g005490 35.374 147 60 3 87 205 16 155 1.63e-17 82.0
MsG0580025827.01.T01 MTR_4g094360 36.190 105 67 0 230 334 233 337 1.65e-17 83.6
MsG0580025827.01.T01 MTR_0017s0190 35.878 131 31 1 128 205 114 244 1.70e-17 82.4
MsG0580025827.01.T01 MTR_2g016710 32.800 125 84 0 210 334 202 326 1.73e-17 83.2
MsG0580025827.01.T01 MTR_1g074020 32.031 128 86 1 209 335 206 333 4.67e-17 81.6
MsG0580025827.01.T01 MTR_5g025290 29.139 151 104 2 206 356 246 393 5.18e-17 82.0
MsG0580025827.01.T01 MTR_5g025290 28.947 152 105 2 205 356 217 365 6.47e-17 81.6
MsG0580025827.01.T01 MTR_0186s0100 62.264 53 20 0 128 180 5 57 6.92e-17 74.7
MsG0580025827.01.T01 MTR_4g094342 39.394 99 60 0 229 327 233 331 6.94e-17 81.3
MsG0580025827.01.T01 MTR_1g070175 31.452 124 85 0 210 333 208 331 7.66e-17 81.3
MsG0580025827.01.T01 MTR_0096s0100 30.370 135 93 1 212 345 215 349 1.32e-16 80.5
MsG0580025827.01.T01 MTR_1g068630 33.566 143 84 2 212 343 211 353 2.82e-16 79.3
MsG0580025827.01.T01 MTR_7g111830 30.709 127 88 0 206 332 206 332 4.49e-16 79.0
MsG0580025827.01.T01 MTR_6g007747 37.838 148 90 2 208 354 201 347 4.85e-16 79.0
MsG0580025827.01.T01 MTR_8g041390 34.545 110 71 1 225 333 228 337 4.97e-16 79.0
MsG0580025827.01.T01 MTR_1g030400 30.709 127 88 0 206 332 205 331 9.48e-16 78.2
MsG0580025827.01.T01 MTR_7g100050 32.787 122 81 1 212 332 211 332 9.93e-16 78.2
MsG0580025827.01.T01 MTR_5g089390 32.143 112 76 0 221 332 216 327 1.23e-15 77.4
MsG0580025827.01.T01 MTR_5g069040 28.000 150 106 1 185 332 192 341 1.29e-15 77.8
MsG0580025827.01.T01 MTR_6g007740 35.374 147 95 0 208 354 203 349 1.42e-15 78.2
MsG0580025827.01.T01 MTR_4g094352 37.736 106 66 0 229 334 235 340 1.67e-15 77.4
MsG0580025827.01.T01 MTR_3g095450 29.371 143 91 1 212 354 209 341 5.44e-15 75.9
MsG0580025827.01.T01 MTR_3g012420 33.645 107 71 0 227 333 232 338 5.84e-15 75.9
MsG0580025827.01.T01 MTR_0009s0040 31.081 148 74 4 15 150 6 137 6.14e-15 71.6
MsG0580025827.01.T01 MTR_5g068790 30.709 127 88 0 206 332 213 339 8.34e-15 75.5
MsG0580025827.01.T01 MTR_3g095420 30.496 141 87 4 212 351 211 341 1.29e-14 74.7
MsG0580025827.01.T01 MTR_1g052205 28.859 149 100 3 212 356 90 236 1.41e-14 73.2
MsG0580025827.01.T01 MTR_0432s0030 57.627 59 24 1 123 180 16 74 6.84e-14 68.9
MsG0580025827.01.T01 MTR_5g025330 29.600 125 87 1 210 334 220 343 1.44e-13 72.0
MsG0580025827.01.T01 MTR_3g019050 29.921 127 89 0 206 332 211 337 2.50e-13 70.9
MsG0580025827.01.T01 MTR_3g058910 48.000 75 27 1 3 65 101 175 5.17e-13 68.9
MsG0580025827.01.T01 MTR_6g024380 49.333 75 26 1 3 65 374 448 5.60e-13 70.1
MsG0580025827.01.T01 MTR_6g461940 43.421 76 38 1 123 198 45 115 1.21e-12 66.2
MsG0580025827.01.T01 MTR_6g007760 31.429 105 72 0 208 312 205 309 1.26e-12 68.2
MsG0580025827.01.T01 MTR_5g025340 28.676 136 96 1 206 341 217 351 1.64e-12 68.6
MsG0580025827.01.T01 MTR_1g056920 50.847 59 17 1 19 65 80 138 1.74e-12 67.0
MsG0580025827.01.T01 MTR_8g072350 26.667 135 98 1 205 339 215 348 1.85e-12 68.2
MsG0580025827.01.T01 MTR_5g025370 30.075 133 92 1 206 338 219 350 3.06e-12 67.4
MsG0580025827.01.T01 MTR_3g462650 59.649 57 22 1 128 183 73 129 3.86e-12 65.5
MsG0580025827.01.T01 MTR_6g022740 42.169 83 28 1 123 205 34 96 4.43e-12 65.1
MsG0580025827.01.T01 MTR_4g113395 58.491 53 22 0 128 180 5 57 5.61e-12 65.9
MsG0580025827.01.T01 MTR_5g025400 28.682 129 91 1 206 334 220 347 5.78e-12 66.6
MsG0580025827.01.T01 MTR_3g072520 33.600 125 82 1 212 335 209 333 9.70e-12 66.2
MsG0580025827.01.T01 MTR_0061s0090 56.604 53 23 0 128 180 114 166 1.07e-11 65.9
MsG0580025827.01.T01 MTR_1g030600 31.452 124 84 1 212 334 218 341 1.10e-11 65.9
MsG0580025827.01.T01 MTR_8g006050 27.559 127 79 1 208 334 191 304 1.26e-11 65.5
MsG0580025827.01.T01 MTR_3g095440 28.671 143 92 1 212 354 209 341 3.15e-11 64.3
MsG0580025827.01.T01 MTR_3g448400 47.458 59 31 0 123 181 7 65 5.12e-11 62.8
MsG0580025827.01.T01 MTR_2g079380 49.275 69 28 2 112 180 193 254 5.25e-11 62.8
MsG0580025827.01.T01 MTR_5g034970 34.400 125 69 1 210 334 203 314 7.17e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025827.01.T01 AT3G28070 39.860 143 80 3 214 355 89 226 5.29e-27 107
MsG0580025827.01.T01 AT3G28070 39.860 143 80 3 214 355 126 263 1.44e-26 107
MsG0580025827.01.T01 AT3G28070 39.860 143 80 3 214 355 218 355 9.23e-26 106
MsG0580025827.01.T01 AT1G43650 38.281 128 79 0 210 337 199 326 1.47e-25 105
MsG0580025827.01.T01 AT3G28100 39.683 126 74 2 210 334 211 335 1.66e-25 105
MsG0580025827.01.T01 AT1G44800 40.164 122 73 0 212 333 208 329 1.89e-24 103
MsG0580025827.01.T01 AT3G28130 39.683 126 74 2 210 334 85 209 4.00e-24 99.4
MsG0580025827.01.T01 AT4G08300 39.344 122 74 0 212 333 211 332 5.70e-24 101
MsG0580025827.01.T01 AT3G28130 39.683 126 74 2 210 334 124 248 6.81e-24 99.8
MsG0580025827.01.T01 AT3G28130 39.683 126 74 2 210 334 124 248 6.81e-24 99.8
MsG0580025827.01.T01 AT1G75500 38.406 138 84 1 210 347 222 358 8.34e-24 101
MsG0580025827.01.T01 AT1G75500 38.406 138 84 1 210 347 222 358 8.34e-24 101
MsG0580025827.01.T01 AT3G28080 37.302 126 77 2 210 334 85 209 1.45e-23 97.8
MsG0580025827.01.T01 AT3G28130 39.683 126 74 2 210 334 210 334 1.79e-23 100
MsG0580025827.01.T01 AT3G28080 37.302 126 77 2 210 334 122 246 4.58e-23 97.4
MsG0580025827.01.T01 AT3G28080 37.302 126 77 2 210 334 122 246 4.58e-23 97.4
MsG0580025827.01.T01 AT3G28080 37.302 126 77 2 210 334 122 246 4.58e-23 97.4
MsG0580025827.01.T01 AT3G28080 37.302 126 77 2 210 334 122 246 4.58e-23 97.4
MsG0580025827.01.T01 AT5G40210 31.148 183 120 3 177 354 155 336 9.39e-23 97.8
MsG0580025827.01.T01 AT3G28050 39.062 128 77 1 206 332 199 326 1.34e-22 97.8
MsG0580025827.01.T01 AT3G28080 37.302 126 77 2 210 334 211 335 1.82e-22 97.4
MsG0580025827.01.T01 AT3G28080 37.302 126 77 2 210 334 203 327 1.95e-22 97.1
MsG0580025827.01.T01 AT5G40240 38.095 126 78 0 210 335 232 357 4.85e-22 96.7
MsG0580025827.01.T01 AT5G40240 38.095 126 78 0 210 335 218 343 5.50e-22 96.3
MsG0580025827.01.T01 AT5G40240 38.095 126 78 0 210 335 218 343 5.50e-22 96.3
MsG0580025827.01.T01 AT3G18200 38.168 131 81 0 206 336 94 224 7.95e-22 93.6
MsG0580025827.01.T01 AT3G18200 38.168 131 81 0 206 336 224 354 8.27e-21 92.8
MsG0580025827.01.T01 AT5G64700 36.000 125 80 0 210 334 210 334 4.43e-20 90.5
MsG0580025827.01.T01 AT1G21890 31.973 147 97 1 212 355 217 363 6.13e-20 90.5
MsG0580025827.01.T01 AT4G15540 36.496 137 85 2 214 350 206 340 2.43e-19 88.2
MsG0580025827.01.T01 AT4G15540 36.496 137 85 2 214 350 206 340 2.43e-19 88.2
MsG0580025827.01.T01 AT1G70260 33.125 160 97 2 206 355 211 370 7.85e-19 87.0
MsG0580025827.01.T01 AT5G40230 34.921 126 82 0 210 335 219 344 1.39e-18 86.3
MsG0580025827.01.T01 AT4G30420 29.371 143 101 0 206 348 203 345 4.01e-18 85.1
MsG0580025827.01.T01 AT4G30420 29.371 143 101 0 206 348 193 335 4.50e-18 85.1
MsG0580025827.01.T01 AT2G39510 33.065 124 82 1 212 334 205 328 6.38e-18 84.3
MsG0580025827.01.T01 AT3G28080 48.529 68 35 0 267 334 125 192 9.19e-18 81.3
MsG0580025827.01.T01 AT5G07050 36.449 107 68 0 229 335 240 346 2.26e-17 83.2
MsG0580025827.01.T01 AT3G28080 48.529 68 35 0 267 334 214 281 3.46e-17 81.6
MsG0580025827.01.T01 AT4G01440 32.031 128 79 2 206 329 93 216 1.03e-16 79.3
MsG0580025827.01.T01 AT4G01440 32.031 128 79 2 206 329 93 216 1.03e-16 79.3
MsG0580025827.01.T01 AT1G60050 28.947 152 103 1 206 352 214 365 1.12e-16 80.9
MsG0580025827.01.T01 AT1G68170 34.188 117 73 1 222 334 219 335 3.35e-16 79.3
MsG0580025827.01.T01 AT4G01440 31.579 133 83 2 206 334 201 329 3.87e-16 79.3
MsG0580025827.01.T01 AT1G68170 34.188 117 73 1 222 334 209 325 4.17e-16 79.0
MsG0580025827.01.T01 AT3G30340 31.148 122 80 1 213 334 214 331 1.24e-15 77.8
MsG0580025827.01.T01 AT1G25270 38.614 101 62 0 234 334 224 324 2.63e-15 76.6
MsG0580025827.01.T01 AT3G53210 33.065 124 83 0 212 335 151 274 5.56e-15 75.1
MsG0580025827.01.T01 AT4G08290 32.258 124 84 0 212 335 212 335 7.61e-15 75.5
MsG0580025827.01.T01 AT4G19185 32.237 152 98 3 206 354 149 298 7.79e-15 74.7
MsG0580025827.01.T01 AT2G40900 32.787 122 82 0 212 333 203 324 8.45e-15 75.5
MsG0580025827.01.T01 AT3G53210 33.333 123 82 0 212 334 208 330 1.05e-14 75.1
MsG0580025827.01.T01 AT4G19185 32.237 152 98 3 206 354 227 376 1.19e-14 75.1
MsG0580025827.01.T01 AT3G45870 30.328 122 84 1 206 327 63 183 1.74e-14 72.4
MsG0580025827.01.T01 AT4G28040 33.628 113 68 3 246 352 231 342 2.54e-14 73.6
MsG0580025827.01.T01 AT4G28040 33.628 113 68 3 246 352 231 342 2.54e-14 73.6
MsG0580025827.01.T01 AT4G28040 33.628 113 68 3 246 352 231 342 2.54e-14 73.6
MsG0580025827.01.T01 AT4G28040 33.628 113 68 3 246 352 231 342 2.54e-14 73.6
MsG0580025827.01.T01 AT4G28040 33.628 113 68 3 246 352 231 342 2.54e-14 73.6
MsG0580025827.01.T01 AT5G45370 28.652 178 116 4 174 348 96 265 2.70e-14 72.8
MsG0580025827.01.T01 AT5G45370 28.652 178 116 4 174 348 96 265 2.70e-14 72.8
MsG0580025827.01.T01 AT5G45370 27.429 175 122 2 174 348 138 307 3.57e-14 72.8
MsG0580025827.01.T01 AT5G45370 28.652 178 116 4 174 348 198 367 5.32e-14 72.8
MsG0580025827.01.T01 AT5G45370 28.652 178 116 4 174 348 198 367 5.32e-14 72.8
MsG0580025827.01.T01 AT5G45370 28.652 178 116 4 174 348 174 343 5.67e-14 72.8
MsG0580025827.01.T01 AT3G45870 30.328 122 84 1 206 327 139 259 6.27e-14 72.0
MsG0580025827.01.T01 AT1G09380 28.226 124 89 0 206 329 203 326 1.03e-13 72.0
MsG0580025827.01.T01 AT3G28070 36.735 98 60 2 214 310 218 314 1.22e-13 71.2
MsG0580025827.01.T01 AT2G37450 33.607 122 80 1 212 332 111 232 1.34e-13 70.5
MsG0580025827.01.T01 AT2G37450 33.607 122 80 1 212 332 144 265 1.72e-13 70.5
MsG0580025827.01.T01 AT3G45870 30.328 122 84 1 206 327 214 334 2.21e-13 71.2
MsG0580025827.01.T01 AT5G13670 31.897 116 77 2 241 356 238 351 3.20e-13 70.5
MsG0580025827.01.T01 AT2G37450 33.607 122 80 1 212 332 183 304 3.75e-13 70.1
MsG0580025827.01.T01 AT2G37460 29.231 130 91 1 212 340 210 339 1.07e-12 68.9
MsG0580025827.01.T01 AT4G01440 32.110 109 66 2 206 310 201 305 8.01e-12 65.9
MsG0580025827.01.T01 AT4G01430 24.615 130 93 1 226 355 87 211 1.45e-11 63.9
MsG0580025827.01.T01 AT3G28060 31.132 106 71 2 206 310 50 154 1.97e-11 62.0
MsG0580025827.01.T01 AT4G01430 24.615 130 93 1 226 355 224 348 6.78e-11 63.5
MsG0580025827.01.T01 AT1G21890 31.313 99 68 0 212 310 217 315 9.95e-11 62.8

Find 69 sgRNAs with CRISPR-Local

Find 456 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTGCTTTACTAGGTAAT+TGG 0.238345 5:+24817530 MsG0580025827.01.T01:intron
GTGTATCTTGGTCTCCATTA+TGG 0.239246 5:+24817053 MsG0580025827.01.T01:CDS
TTGATCTCTGACCACAATTA+AGG 0.282299 5:-24822117 None:intergenic
ACGACATTGGTGATGGTAAA+TGG 0.288951 5:+24816705 MsG0580025827.01.T01:CDS
ATTCTATTTGAAGCTATAAC+AGG 0.324429 5:+24816921 MsG0580025827.01.T01:CDS
GTATAAAACTCCAAGTAATA+TGG 0.331304 5:+24816132 MsG0580025827.01.T01:CDS
ATATAAATTAATAATAGTTA+TGG 0.352337 5:-24823852 None:intergenic
ATCACTGAGTTTCATCGAAA+TGG 0.362088 5:+24816271 MsG0580025827.01.T01:CDS
ATGGGAACTAAAGCTTGATA+TGG 0.364178 5:+24822145 MsG0580025827.01.T01:CDS
ATAGTTATGGGTTCTTGTTA+AGG 0.381892 5:-24823839 None:intergenic
TATAAATTAATAATAGTTAT+GGG 0.391104 5:-24823851 None:intergenic
TAACAGGCAATAGCTGCAAT+AGG 0.395737 5:+24823346 MsG0580025827.01.T01:intron
AGGAGGTGAAACAGACGGTT+TGG 0.402061 5:+24816188 MsG0580025827.01.T01:CDS
TACTAGGTAATTGGTGTTGG+AGG 0.418411 5:+24817539 MsG0580025827.01.T01:intron
CTTTACTAGGTAATTGGTGT+TGG 0.419159 5:+24817536 MsG0580025827.01.T01:intron
TATCTTGACTCCATATTACT+TGG 0.419681 5:-24816142 None:intergenic
ATGACTCTTTGCAGTTTGAT+TGG 0.423275 5:+24823610 MsG0580025827.01.T01:intron
GGAGGTGAAACAGACGGTTT+GGG 0.428656 5:+24816189 MsG0580025827.01.T01:CDS
CTTATTTATCACAATTCAAA+CGG 0.430678 5:+24822085 MsG0580025827.01.T01:CDS
ATGTCAGCAATGGTTGAGTT+TGG 0.434791 5:+24816771 MsG0580025827.01.T01:CDS
CACCAATGTCGTTACTGAAC+CGG 0.436851 5:-24816694 None:intergenic
TGGGAACTAAAGCTTGATAT+GGG 0.448002 5:+24822146 MsG0580025827.01.T01:CDS
ATTCAACATCAATACCATAA+TGG 0.449388 5:-24817067 None:intergenic
GGAAAGGGATTCAAAACTTA+GGG 0.454389 5:+24823698 MsG0580025827.01.T01:CDS
CGAAGCTTTGCCCCATTGCA+CGG 0.455349 5:-24823662 None:intergenic
GGGAAAGGGATTCAAAACTT+AGG 0.456275 5:+24823697 MsG0580025827.01.T01:CDS
TCGAAATGGAAGGCTAGAAA+AGG 0.457038 5:+24816285 MsG0580025827.01.T01:CDS
ATGTGAATGTGACAGATTCT+TGG 0.459932 5:+24816979 MsG0580025827.01.T01:CDS
CGTGCAATGGGGCAAAGCTT+CGG 0.467000 5:+24823663 MsG0580025827.01.T01:CDS
TTTCGTTGGAGAGGGGATTG+AGG 0.476802 5:+24816746 MsG0580025827.01.T01:CDS
TGGAGACCAAGATACACAAA+AGG 0.479046 5:-24817047 None:intergenic
ATACACAAAAGGGATCTTCT+CGG 0.483026 5:-24817036 None:intergenic
AAAGTTGTAGTGGCGCGTTA+TGG 0.500292 5:+24817592 MsG0580025827.01.T01:CDS
GACAGATTCTTGGTTGGCAG+AGG 0.503158 5:+24816989 MsG0580025827.01.T01:CDS
AACAGGCAATAGCTGCAATA+GGG 0.513949 5:+24823347 MsG0580025827.01.T01:intron
TTGGTTGGCAGAGGCAGTAA+TGG 0.514128 5:+24816998 MsG0580025827.01.T01:CDS
TTATTTATCACAATTCAAAC+GGG 0.516413 5:+24822086 MsG0580025827.01.T01:CDS
ATCCACTTACACCATAAAAG+AGG 0.519237 5:-24816660 None:intergenic
TGTGCTATGTTTAAACCGAT+CGG 0.521072 5:+24823421 MsG0580025827.01.T01:CDS
TTAAACATAGCACAAAATAG+AGG 0.532153 5:-24823412 None:intergenic
CGAAATGGAAGGCTAGAAAA+GGG 0.535178 5:+24816286 MsG0580025827.01.T01:CDS
TTTATGGTGTAAGTGGATGT+TGG 0.535398 5:+24816665 MsG0580025827.01.T01:CDS
TGGAGGATGCATGTTGATAG+AGG 0.541717 5:+24817556 MsG0580025827.01.T01:CDS
TTGTAACAATGGAACAACAT+TGG 0.549077 5:-24823728 None:intergenic
AAGACTATGACTATTACAGC+AGG 0.552572 5:-24822053 None:intergenic
ACATGGTGCGTGCAAAGAGC+TGG 0.555731 5:+24823388 MsG0580025827.01.T01:CDS
GGAGACCAAGATACACAAAA+GGG 0.563173 5:-24817046 None:intergenic
GGTGCTGTTATAATCGTGGT+AGG 0.568407 5:+24823631 MsG0580025827.01.T01:CDS
TGGTCAGAGATCAAAGTGCA+TGG 0.568914 5:+24822126 MsG0580025827.01.T01:CDS
TTTATGGTATAAAGTTGTAG+TGG 0.575382 5:+24817582 MsG0580025827.01.T01:CDS
TTCAGTAACGACATTGGTGA+TGG 0.581047 5:+24816698 MsG0580025827.01.T01:CDS
GAATTGTGATAAATAAGACT+TGG 0.583094 5:-24822079 None:intergenic
TCCACTTACACCATAAAAGA+GGG 0.598537 5:-24816659 None:intergenic
AAGTGGATGTTGGAATGTGC+CGG 0.605115 5:+24816675 MsG0580025827.01.T01:CDS
TTCGATACTTGTTACAAACA+TGG 0.608790 5:+24823371 MsG0580025827.01.T01:CDS
GGAGGATGCATGTTGATAGA+GGG 0.609139 5:+24817557 MsG0580025827.01.T01:CDS
CTGAGTTTCATCGAAATGGA+AGG 0.609341 5:+24816275 MsG0580025827.01.T01:CDS
ACGGTGAAGATTATTCCGAT+CGG 0.613970 5:-24823436 None:intergenic
GCGTTATGGTGAGGAAGTGT+CGG 0.620740 5:+24817606 MsG0580025827.01.T01:CDS
TGCCGGTTCAGTAACGACAT+TGG 0.624025 5:+24816692 MsG0580025827.01.T01:CDS
TTTGAAGGAGGTGAAACAGA+CGG 0.626010 5:+24816183 MsG0580025827.01.T01:CDS
GATTGAGGAAATGTCAGCAA+TGG 0.630278 5:+24816761 MsG0580025827.01.T01:CDS
GGGAGTGTATGCCTTAATTG+TGG 0.634297 5:+24822106 MsG0580025827.01.T01:CDS
GATTGGTGCTGTTATAATCG+TGG 0.634315 5:+24823627 MsG0580025827.01.T01:CDS
GGTCAGAGATCAAAGTGCAT+GGG 0.636822 5:+24822127 MsG0580025827.01.T01:CDS
TGTAGTGGCGCGTTATGGTG+AGG 0.641027 5:+24817597 MsG0580025827.01.T01:CDS
GAATGTGACAGATTCTTGGT+TGG 0.652277 5:+24816983 MsG0580025827.01.T01:CDS
GGGAACTAAAGCTTGATATG+GGG 0.684135 5:+24822147 MsG0580025827.01.T01:CDS
AGACTATGACTATTACAGCA+GGG 0.696834 5:-24822052 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAATCTCAATTTAA+TGG + Chr5:24821667-24821686 MsG0580025827.01.T01:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - Chr5:24821070-24821089 None:intergenic 10.0%
!! AATAATAATATGTAATAGAA+GGG - Chr5:24820468-24820487 None:intergenic 10.0%
!! GAATTAATAAAATAAAAAAG+GGG - Chr5:24819158-24819177 None:intergenic 10.0%
!! GAGAATTAATAAAATAAAAA+AGG - Chr5:24819160-24819179 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - Chr5:24821071-24821090 None:intergenic 10.0%
!! TTTATAAATTGTTCAATATT+TGG - Chr5:24820648-24820667 None:intergenic 10.0%
!!! AAAAGTAAAAATTTATCTTT+TGG + Chr5:24817117-24817136 MsG0580025827.01.T01:intron 10.0%
!!! GTATAATTTTTAAACTTTAT+TGG + Chr5:24819778-24819797 MsG0580025827.01.T01:intron 10.0%
!!! TATCAATAATTTTTTTTTGT+TGG + Chr5:24818645-24818664 MsG0580025827.01.T01:intron 10.0%
!!! TTTATTGATTAAAATTCATT+CGG - Chr5:24819923-24819942 None:intergenic 10.0%
!! AATAAACTAAACAATTTGAA+TGG - Chr5:24821177-24821196 None:intergenic 15.0%
!! ACAAAAAAAAAATGTTAATC+TGG - Chr5:24820726-24820745 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - Chr5:24821069-24821088 None:intergenic 15.0%
!! ATGAAAAAATTTAGACATAA+TGG - Chr5:24820184-24820203 None:intergenic 15.0%
!! CTATAAACATGAAATTTATT+GGG + Chr5:24822213-24822232 MsG0580025827.01.T01:intron 15.0%
!! GAATAATAATATGTAATAGA+AGG - Chr5:24820469-24820488 None:intergenic 15.0%
!! TAAAGTTTAAAAATTATACG+AGG - Chr5:24819777-24819796 None:intergenic 15.0%
!! TCAATATGTAAATCAATATT+GGG + Chr5:24820537-24820556 MsG0580025827.01.T01:intron 15.0%
!! TCACAAATATAAATAAAAGA+TGG + Chr5:24820073-24820092 MsG0580025827.01.T01:intron 15.0%
!! TCTATAAACATGAAATTTAT+TGG + Chr5:24822212-24822231 MsG0580025827.01.T01:intron 15.0%
!!! AAAATCATATGAATTGTTTT+TGG - Chr5:24820677-24820696 None:intergenic 15.0%
!!! AAAATGTTTTTTTATAGGTT+TGG + Chr5:24817242-24817261 MsG0580025827.01.T01:intron 15.0%
!!! AAATGTTTTTTTATAGGTTT+GGG + Chr5:24817243-24817262 MsG0580025827.01.T01:intron 15.0%
!!! AACAAATTATCATTTTTCTT+CGG - Chr5:24823043-24823062 None:intergenic 15.0%
!!! AATTATTTTGTGATTTTTGT+TGG - Chr5:24821473-24821492 None:intergenic 15.0%
!!! AATTTTTAAACTTTATTGGA+AGG + Chr5:24819782-24819801 MsG0580025827.01.T01:intron 15.0%
!!! AGATTAACATTTTTTTTTTG+TGG + Chr5:24820725-24820744 MsG0580025827.01.T01:intron 15.0%
!!! ATAGTTTTATCAAGTATTTT+TGG + Chr5:24816218-24816237 MsG0580025827.01.T01:CDS 15.0%
!!! ATATTATTTGAGCAATTTTT+CGG - Chr5:24822456-24822475 None:intergenic 15.0%
!!! ATTATTTTGTGATTTTTGTT+GGG - Chr5:24821472-24821491 None:intergenic 15.0%
!!! ATTTTTAATAATGATGTATG+AGG - Chr5:24821349-24821368 None:intergenic 15.0%
!!! CAGAAAAACAAATTTTATAT+TGG - Chr5:24820814-24820833 None:intergenic 15.0%
!!! TAGTTTTATCAAGTATTTTT+GGG + Chr5:24816219-24816238 MsG0580025827.01.T01:CDS 15.0%
!!! TATTTTTTTAAGTAGATTAG+TGG - Chr5:24818620-24818639 None:intergenic 15.0%
!!! TCTTTGATACTTTATTTAAA+AGG + Chr5:24821200-24821219 MsG0580025827.01.T01:intron 15.0%
!!! TTATTGATTAAAATTCATTC+GGG - Chr5:24819922-24819941 None:intergenic 15.0%
!!! TTCTTTTATTAGATAAAACT+CGG + Chr5:24819851-24819870 MsG0580025827.01.T01:intron 15.0%
!!! TTTATAAAACTTTTAAATGG+AGG + Chr5:24821520-24821539 MsG0580025827.01.T01:intron 15.0%
!!! TTTGAAGTTAATTAAATGTT+GGG + Chr5:24820352-24820371 MsG0580025827.01.T01:intron 15.0%
!!! TTTTTCATTTGTATTTGTAT+TGG + Chr5:24820196-24820215 MsG0580025827.01.T01:intron 15.0%
!!! TTTTTTTGTTTAATTTTCCT+CGG + Chr5:24819253-24819272 MsG0580025827.01.T01:intron 15.0%
!! AAAAAAATCTCATAAAAGCA+AGG - Chr5:24820580-24820599 None:intergenic 20.0%
!! AAAAATTGAACCCAAAAAAA+CGG - Chr5:24823458-24823477 None:intergenic 20.0%
!! AACAAATTAAGGAATGTTAT+TGG + Chr5:24816431-24816450 MsG0580025827.01.T01:intron 20.0%
!! AATAAAAATCATTCAACTTG+TGG + Chr5:24822680-24822699 MsG0580025827.01.T01:intron 20.0%
!! AATAATTTAATCCAAGAGAA+AGG - Chr5:24819626-24819645 None:intergenic 20.0%
!! AATTAGAGTTATATTGCATT+GGG - Chr5:24821005-24821024 None:intergenic 20.0%
!! AATTGATTATGACAAGAATT+TGG + Chr5:24822563-24822582 MsG0580025827.01.T01:intron 20.0%
!! ACAAATTAAGGAATGTTATT+GGG + Chr5:24816432-24816451 MsG0580025827.01.T01:intron 20.0%
!! ACATATTACTCAAAAGAAAA+AGG - Chr5:24821962-24821981 None:intergenic 20.0%
!! AGAATTATCTCAAAAATTGT+TGG - Chr5:24821382-24821401 None:intergenic 20.0%
!! AGAGACATCATTATTAAATT+TGG + Chr5:24821321-24821340 MsG0580025827.01.T01:intron 20.0%
!! ATAACTAATTATACCTTAAG+TGG + Chr5:24818681-24818700 MsG0580025827.01.T01:intron 20.0%
!! ATAATAAATGAATGATTACC+TGG - Chr5:24822190-24822209 None:intergenic 20.0%
!! ATATTCACTTATGAATAAGT+AGG - Chr5:24818593-24818612 None:intergenic 20.0%
!! CCAAAAATTAATTTACCTTA+TGG - Chr5:24821991-24822010 None:intergenic 20.0%
!! CTCAATATGTAAATCAATAT+TGG + Chr5:24820536-24820555 MsG0580025827.01.T01:intron 20.0%
!! CTCAATTTAATGGTTTAATT+AGG + Chr5:24821677-24821696 MsG0580025827.01.T01:intron 20.0%
!! CTTATTTATCACAATTCAAA+CGG + Chr5:24822085-24822104 MsG0580025827.01.T01:CDS 20.0%
!! GAATTATCTCAAAAATTGTT+GGG - Chr5:24821381-24821400 None:intergenic 20.0%
!! GATTTGAAAAGATTATGATT+TGG + Chr5:24816593-24816612 MsG0580025827.01.T01:intron 20.0%
!! TAATTAGAGTTATATTGCAT+TGG - Chr5:24821006-24821025 None:intergenic 20.0%
!! TACATAAAGTGTAAATTAGT+AGG - Chr5:24820414-24820433 None:intergenic 20.0%
!! TATTCACTTATGAATAAGTA+GGG - Chr5:24818592-24818611 None:intergenic 20.0%
!! TGGAATGAATAAATATGTAA+TGG + Chr5:24819068-24819087 MsG0580025827.01.T01:intron 20.0%
!! TTAGGATTGAAAGAATATAT+TGG + Chr5:24821695-24821714 MsG0580025827.01.T01:intron 20.0%
!! TTATTTATCACAATTCAAAC+GGG + Chr5:24822086-24822105 MsG0580025827.01.T01:CDS 20.0%
!! TTGAAGTTAATTAAATGTTG+GGG + Chr5:24820353-24820372 MsG0580025827.01.T01:intron 20.0%
!!! AAATATGATATGTTTTGAGT+GGG - Chr5:24819441-24819460 None:intergenic 20.0%
!!! AATAAAATCCTATTGTTTTC+AGG - Chr5:24820000-24820019 None:intergenic 20.0%
!!! AATTTTCACCAAATTTGAAT+TGG + Chr5:24821845-24821864 MsG0580025827.01.T01:intron 20.0%
!!! ACATTTTAAAAATGGATTTC+AGG + Chr5:24819883-24819902 MsG0580025827.01.T01:intron 20.0%
!!! ATTTGTTGTCATATTATACA+AGG + Chr5:24821774-24821793 MsG0580025827.01.T01:intron 20.0%
!!! ATTTTTTGTCACTTACTAAA+AGG - Chr5:24819516-24819535 None:intergenic 20.0%
!!! CCATAAGGTAAATTAATTTT+TGG + Chr5:24821988-24822007 MsG0580025827.01.T01:intron 20.0%
!!! CTTTGAAGTTAATTAAATGT+TGG + Chr5:24820351-24820370 MsG0580025827.01.T01:intron 20.0%
!!! GAAATCCATTTTTAAAATGT+GGG - Chr5:24819883-24819902 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - Chr5:24820936-24820955 None:intergenic 20.0%
!!! GATTAAATCTTTTAGTTTGA+AGG + Chr5:24816168-24816187 MsG0580025827.01.T01:CDS 20.0%
!!! GTAATATGTTTTTTACCATA+AGG + Chr5:24821973-24821992 MsG0580025827.01.T01:intron 20.0%
!!! TAAATATGATATGTTTTGAG+TGG - Chr5:24819442-24819461 None:intergenic 20.0%
!!! TAATTTTTGGTGATAAAAGT+TGG + Chr5:24816868-24816887 MsG0580025827.01.T01:intron 20.0%
!!! TACACTTTTTACCATAATAT+GGG + Chr5:24821935-24821954 MsG0580025827.01.T01:intron 20.0%
!!! TATACTTTGTTTTGTAACAA+TGG - Chr5:24823742-24823761 None:intergenic 20.0%
!!! TATTTGTGAAATGAAGATTT+TGG + Chr5:24820016-24820035 MsG0580025827.01.T01:intron 20.0%
!!! TCATAAATCATTATTTTCTG+TGG - Chr5:24822740-24822759 None:intergenic 20.0%
!!! TCTTTTATACCTCTATATAA+AGG - Chr5:24818101-24818120 None:intergenic 20.0%
!!! TGAAATCCATTTTTAAAATG+TGG - Chr5:24819884-24819903 None:intergenic 20.0%
!!! TTTGTTGTCATATTATACAA+GGG + Chr5:24821775-24821794 MsG0580025827.01.T01:intron 20.0%
!!! TTTTAACAAAAGTATGTTGA+TGG + Chr5:24816956-24816975 MsG0580025827.01.T01:CDS 20.0%
!!! TTTTCTCTCTTTATTGTTTT+AGG + Chr5:24822373-24822392 MsG0580025827.01.T01:intron 20.0%
!!! TTTTTTTTTGGTACACTATT+GGG + Chr5:24822245-24822264 MsG0580025827.01.T01:intron 20.0%
!!! TTTTTTTTTTGGTACACTAT+TGG + Chr5:24822244-24822263 MsG0580025827.01.T01:intron 20.0%
! AAACATGAAATTTATTGGGT+AGG + Chr5:24822217-24822236 MsG0580025827.01.T01:intron 25.0%
! AAACTGTAAGCTTAATAATG+TGG - Chr5:24822811-24822830 None:intergenic 25.0%
! AAAGTGAGAAAAACACAAAA+AGG + Chr5:24817714-24817733 MsG0580025827.01.T01:intron 25.0%
! AAGATTAACTTTGCTTTACT+AGG + Chr5:24817302-24817321 MsG0580025827.01.T01:intron 25.0%
! AAGTGAGAAAAACACAAAAA+GGG + Chr5:24817715-24817734 MsG0580025827.01.T01:intron 25.0%
! AATAGGAACTATAGTATCAA+TGG + Chr5:24821744-24821763 MsG0580025827.01.T01:intron 25.0%
! AATGATTATAGCTAATAAGG+TGG + Chr5:24816511-24816530 MsG0580025827.01.T01:intron 25.0%
! ATACTCTAGATTACAATTTG+TGG + Chr5:24821225-24821244 MsG0580025827.01.T01:intron 25.0%
! ATTCAACATCAATACCATAA+TGG - Chr5:24817070-24817089 None:intergenic 25.0%
! ATTCTTTACTTTCTTCAATG+TGG + Chr5:24821896-24821915 MsG0580025827.01.T01:intron 25.0%
! CATAAAAGCAAGGTAAATTA+TGG - Chr5:24820570-24820589 None:intergenic 25.0%
! CTACTAAACAAAATGTAACA+CGG + Chr5:24822490-24822509 MsG0580025827.01.T01:intron 25.0%
! CTTCAAAGTTCAACTATTAT+TGG - Chr5:24820339-24820358 None:intergenic 25.0%
! GAAACTGAAGTTAGTTATTA+TGG - Chr5:24818446-24818465 None:intergenic 25.0%
! GAATTGTGATAAATAAGACT+TGG - Chr5:24822082-24822101 None:intergenic 25.0%
! GTACTAAGTACTATTATATG+AGG + Chr5:24820378-24820397 MsG0580025827.01.T01:intron 25.0%
! GTATAAAACTCCAAGTAATA+TGG + Chr5:24816132-24816151 MsG0580025827.01.T01:CDS 25.0%
! GTTAATCTGGTTAAAAAAGA+GGG - Chr5:24820713-24820732 None:intergenic 25.0%
! TAAAAAGAGAGAAAAGAAGA+AGG + Chr5:24821442-24821461 MsG0580025827.01.T01:intron 25.0%
! TAGCTATAATCATTCCATTA+AGG - Chr5:24816505-24816524 None:intergenic 25.0%
! TATACCTCTATATAAAGGAA+TGG - Chr5:24818096-24818115 None:intergenic 25.0%
! TCTTATATATTCCTGTTAAC+AGG + Chr5:24823330-24823349 MsG0580025827.01.T01:intron 25.0%
! TGGAATGATTATAGCTAATA+AGG + Chr5:24816508-24816527 MsG0580025827.01.T01:intron 25.0%
! TGTGATATCTAATTCACATT+CGG + Chr5:24816457-24816476 MsG0580025827.01.T01:intron 25.0%
! TGTTAACAGGAATATATAAG+AGG - Chr5:24823331-24823350 None:intergenic 25.0%
! TGTTAATCTGGTTAAAAAAG+AGG - Chr5:24820714-24820733 None:intergenic 25.0%
! TGTTGTTAGCAAACAAATTA+AGG + Chr5:24816420-24816439 MsG0580025827.01.T01:intron 25.0%
! TGTTTAGTAGTTTGAAAAAG+AGG - Chr5:24822480-24822499 None:intergenic 25.0%
! TTAAACATAGCACAAAATAG+AGG - Chr5:24823415-24823434 None:intergenic 25.0%
! TTATAGAAGATGATACATGT+AGG - Chr5:24817213-24817232 None:intergenic 25.0%
! TTATCTTACCTGAAAACAAT+AGG + Chr5:24819989-24820008 MsG0580025827.01.T01:intron 25.0%
! TTGAATAGTTCATCTCATTT+AGG - Chr5:24823306-24823325 None:intergenic 25.0%
! TTTATGGTATAAAGTTGTAG+TGG + Chr5:24817582-24817601 MsG0580025827.01.T01:CDS 25.0%
! TTTATTAGATAAAACTCGGA+TGG + Chr5:24819855-24819874 MsG0580025827.01.T01:intron 25.0%
! TTTATTCATTCCATCTTTCA+TGG - Chr5:24819061-24819080 None:intergenic 25.0%
! TTTGAAAACCATTCATTGAA+AGG + Chr5:24818221-24818240 MsG0580025827.01.T01:intron 25.0%
! TTTGAAGAATTAGAAGACAT+TGG - Chr5:24818369-24818388 None:intergenic 25.0%
!! AAAATGGATTTCAGGTAAAA+TGG + Chr5:24819891-24819910 MsG0580025827.01.T01:intron 25.0%
!! AAATAATTTCAGCAGAGTTT+TGG + Chr5:24818026-24818045 MsG0580025827.01.T01:intron 25.0%
!! AAGCAAATTATTACCTTTTG+TGG + Chr5:24818981-24819000 MsG0580025827.01.T01:intron 25.0%
!! AAGTTTAACTTTGCTTTACT+AGG + Chr5:24817523-24817542 MsG0580025827.01.T01:intron 25.0%
!! ACCAAATTTGAATTGGATTT+TGG + Chr5:24821852-24821871 MsG0580025827.01.T01:intron 25.0%
!! AGCAAATTATTACCTTTTGT+GGG + Chr5:24818982-24819001 MsG0580025827.01.T01:intron 25.0%
!! ATTCTATTTGAAGCTATAAC+AGG + Chr5:24816921-24816940 MsG0580025827.01.T01:CDS 25.0%
!! CATATTATGGTAAAAAGTGT+AGG - Chr5:24821936-24821955 None:intergenic 25.0%
!! CCAAATTTGAATTGGATTTT+GGG + Chr5:24821853-24821872 MsG0580025827.01.T01:intron 25.0%
!! TTATTGGAAGGTGAATTTTA+TGG + Chr5:24819794-24819813 MsG0580025827.01.T01:intron 25.0%
!! TTGAAATGACTCAGTTATTT+TGG - Chr5:24820959-24820978 None:intergenic 25.0%
!! TTTTATTGCTATCATTCCTA+AGG + Chr5:24816321-24816340 MsG0580025827.01.T01:intron 25.0%
!!! AAGATTATGATTTGGTTGAT+TGG + Chr5:24816601-24816620 MsG0580025827.01.T01:intron 25.0%
!!! AATAATCTTCACCGTTTTTT+TGG + Chr5:24823444-24823463 MsG0580025827.01.T01:CDS 25.0%
!!! ATAATCTTCACCGTTTTTTT+GGG + Chr5:24823445-24823464 MsG0580025827.01.T01:CDS 25.0%
!!! CTACACTTTTTACCATAATA+TGG + Chr5:24821934-24821953 MsG0580025827.01.T01:intron 25.0%
!!! GATCAATCATCATTGATTTT+TGG + Chr5:24818167-24818186 MsG0580025827.01.T01:intron 25.0%
!!! GCAGATGATACTTTAATTTT+TGG + Chr5:24816855-24816874 MsG0580025827.01.T01:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - Chr5:24820937-24820956 None:intergenic 25.0%
!!! GGGTAGGTTTTTTTTTTTTT+TGG + Chr5:24822233-24822252 MsG0580025827.01.T01:intron 25.0%
!!! TAAATCTTTTAGTTTGAAGG+AGG + Chr5:24816171-24816190 MsG0580025827.01.T01:CDS 25.0%
!!! TATAATTAGTTTGCCACTTA+AGG - Chr5:24818697-24818716 None:intergenic 25.0%
!!! TCATTGATTTTTGGTTGATA+TGG + Chr5:24818176-24818195 MsG0580025827.01.T01:intron 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG - Chr5:24820958-24820977 None:intergenic 25.0%
!!! TTTTATCAAGTATTTTTGGG+AGG + Chr5:24816222-24816241 MsG0580025827.01.T01:CDS 25.0%
!!! TTTTTGGGTTCAATTTTTCT+AGG + Chr5:24823460-24823479 MsG0580025827.01.T01:CDS 25.0%
!!! TTTTTGTGGTTTTATATGCA+TGG + Chr5:24820739-24820758 MsG0580025827.01.T01:intron 25.0%
!!! TTTTTTTATAGGTTTGGGTA+AGG + Chr5:24817248-24817267 MsG0580025827.01.T01:intron 25.0%
AAAATGACTCTTTGATGTGA+TGG - Chr5:24818139-24818158 None:intergenic 30.0%
AAGAAAAAGGTCCCATATTA+TGG - Chr5:24821949-24821968 None:intergenic 30.0%
AAGAAGAATAGAAAGTAGAC+CGG - Chr5:24817183-24817202 None:intergenic 30.0%
AAGTTAATTAAATGTTGGGG+CGG + Chr5:24820356-24820375 MsG0580025827.01.T01:intron 30.0%
ACTTTGCTTTACTAGGTAAT+TGG + Chr5:24817309-24817328 MsG0580025827.01.T01:intron 30.0%
AGTGAGAAAAACACAAAAAG+GGG + Chr5:24817716-24817735 MsG0580025827.01.T01:intron 30.0%
ATAACATATGTACAAAGTCG+TGG - Chr5:24818836-24818855 None:intergenic 30.0%
ATAGTTATGGGTTCTTGTTA+AGG - Chr5:24823842-24823861 None:intergenic 30.0%
ATGCATCCAATCAAACAAAT+TGG - Chr5:24816383-24816402 None:intergenic 30.0%
ATGTTCAAAGTCTAATGTAG+CGG + Chr5:24817818-24817837 MsG0580025827.01.T01:intron 30.0%
ATTAAAGTTGCCATGAAAGA+TGG + Chr5:24819048-24819067 MsG0580025827.01.T01:intron 30.0%
ATTATCATATCACTAGACCA+TGG - Chr5:24821581-24821600 None:intergenic 30.0%
CCATTTGTCCATTAGTTATA+AGG + Chr5:24822767-24822786 MsG0580025827.01.T01:intron 30.0%
CCCAAAATCCAATTCAAATT+TGG - Chr5:24821856-24821875 None:intergenic 30.0%
CGGATATAAAAGAGATAGAT+AGG + Chr5:24817838-24817857 MsG0580025827.01.T01:intron 30.0%
CTACTTTCTATTCTTCTTCA+AGG + Chr5:24817185-24817204 MsG0580025827.01.T01:intron 30.0%
CTGAAACCTAAAATATGTAG+CGG - Chr5:24822019-24822038 None:intergenic 30.0%
GACACTTGATATACAATTAC+TGG + Chr5:24817916-24817935 MsG0580025827.01.T01:intron 30.0%
GATACTCACAATTTCTTGAA+AGG - Chr5:24822646-24822665 None:intergenic 30.0%
GATATAATCATTCCCACAAA+AGG - Chr5:24818997-24819016 None:intergenic 30.0%
GATGAATGTATCTTGAAGAT+TGG - Chr5:24821805-24821824 None:intergenic 30.0%
GTAATGGTTGTTTATTCCAT+GGG + Chr5:24819084-24819103 MsG0580025827.01.T01:intron 30.0%
GTCAATTTCCTTTCAATGAA+TGG - Chr5:24818232-24818251 None:intergenic 30.0%
TACTATAGTTCCTATTGCTT+TGG - Chr5:24821740-24821759 None:intergenic 30.0%
TATCTTGACTCCATATTACT+TGG - Chr5:24816145-24816164 None:intergenic 30.0%
TCTAATGATCTTCAAACTCT+TGG + Chr5:24818478-24818497 MsG0580025827.01.T01:intron 30.0%
TCTTCCATTCCTTTATATAG+AGG + Chr5:24818089-24818108 MsG0580025827.01.T01:intron 30.0%
TGAAACCTAAAATATGTAGC+GGG - Chr5:24822018-24822037 None:intergenic 30.0%
TGCCAATAAAAGAAGAGAAA+AGG - Chr5:24819279-24819298 None:intergenic 30.0%
TGTAATGGTTGTTTATTCCA+TGG + Chr5:24819083-24819102 MsG0580025827.01.T01:intron 30.0%
TGTATCACATCTAAAGACAA+GGG - Chr5:24820307-24820326 None:intergenic 30.0%
TTAAAAAATAGTACGGTACG+AGG - Chr5:24823192-24823211 None:intergenic 30.0%
TTCAATGTGGTACATATATC+AGG + Chr5:24821909-24821928 MsG0580025827.01.T01:intron 30.0%
TTGTAACAATGGAACAACAT+TGG - Chr5:24823731-24823750 None:intergenic 30.0%
TTGTATCACATCTAAAGACA+AGG - Chr5:24820308-24820327 None:intergenic 30.0%
! AATTTGAATTGGATTTTGGG+AGG + Chr5:24821856-24821875 MsG0580025827.01.T01:intron 30.0%
! AGTTGAATTTCCCTCTTTTA+TGG + Chr5:24816649-24816668 MsG0580025827.01.T01:CDS 30.0%
! CCTTATAACTAATGGACAAA+TGG - Chr5:24822770-24822789 None:intergenic 30.0%
! CTGTTGATAAACAAAGCTAA+GGG - Chr5:24819132-24819151 None:intergenic 30.0%
! CTTTTCACAAGTTATAAGGT+TGG + Chr5:24816795-24816814 MsG0580025827.01.T01:intron 30.0%
! GTTTTTCTGAATCCAATCAT+TGG + Chr5:24820825-24820844 MsG0580025827.01.T01:intron 30.0%
! TATGCTGAAGAAATTTTCGT+TGG + Chr5:24816732-24816751 MsG0580025827.01.T01:CDS 30.0%
! TGGTCTTTTCACAAGTTATA+AGG + Chr5:24816791-24816810 MsG0580025827.01.T01:CDS 30.0%
! TTCGATACTTGTTACAAACA+TGG + Chr5:24823371-24823390 MsG0580025827.01.T01:CDS 30.0%
! TTTAGGCCAATTTGTTTGAT+TGG + Chr5:24816374-24816393 MsG0580025827.01.T01:intron 30.0%
! TTTTCAAATTATTCCCTCCT+AGG - Chr5:24818209-24818228 None:intergenic 30.0%
! TTTTCTCTTCTTTTATTGGC+AGG + Chr5:24819278-24819297 MsG0580025827.01.T01:intron 30.0%
!! AATGATAATTTGTTCGCTCA+AGG + Chr5:24823049-24823068 MsG0580025827.01.T01:intron 30.0%
!! ATGTTGATAGAGGGATTTTA+TGG + Chr5:24817566-24817585 MsG0580025827.01.T01:CDS 30.0%
!! ATTTGAATTGGATTTTGGGA+GGG + Chr5:24821857-24821876 MsG0580025827.01.T01:intron 30.0%
!! TGGATCCCACATTTTAAAAA+TGG + Chr5:24819875-24819894 MsG0580025827.01.T01:intron 30.0%
!!! AAGATTTTGGAGCATATCAT+CGG + Chr5:24820029-24820048 MsG0580025827.01.T01:intron 30.0%
!!! ATATCTGTTTTAGCTCAAAG+TGG + Chr5:24819012-24819031 MsG0580025827.01.T01:intron 30.0%
!!! GTTGATTGTCATTTTATACC+AGG + Chr5:24822169-24822188 MsG0580025827.01.T01:CDS 30.0%
AAAGCTTCGGAAGAAAAAGT+TGG + Chr5:24823676-24823695 MsG0580025827.01.T01:CDS 35.0%
AAGACTATGACTATTACAGC+AGG - Chr5:24822056-24822075 None:intergenic 35.0%
AAGCTTCGGAAGAAAAAGTT+GGG + Chr5:24823677-24823696 MsG0580025827.01.T01:CDS 35.0%
AAGTTATAAGGTTGGATGAG+AGG + Chr5:24816803-24816822 MsG0580025827.01.T01:intron 35.0%
AATTGTGAGTATCTCTGTCA+AGG + Chr5:24822653-24822672 MsG0580025827.01.T01:intron 35.0%
AGAAAATGGGTCAGATATTC+CGG - Chr5:24820923-24820942 None:intergenic 35.0%
AGACTATGACTATTACAGCA+GGG - Chr5:24822055-24822074 None:intergenic 35.0%
AGTGTGGTGAAAGAATTTGA+TGG + Chr5:24817655-24817674 MsG0580025827.01.T01:intron 35.0%
ATACACAAAAGGGATCTTCT+CGG - Chr5:24817039-24817058 None:intergenic 35.0%
ATATGGTTAATGTCCTAGGA+GGG + Chr5:24818193-24818212 MsG0580025827.01.T01:intron 35.0%
ATCACTGAGTTTCATCGAAA+TGG + Chr5:24816271-24816290 MsG0580025827.01.T01:CDS 35.0%
ATCCACTTACACCATAAAAG+AGG - Chr5:24816663-24816682 None:intergenic 35.0%
ATCTGATAGAGTTCAAAGTC+TGG + Chr5:24817791-24817810 MsG0580025827.01.T01:intron 35.0%
ATGACTCTTTGCAGTTTGAT+TGG + Chr5:24823610-24823629 MsG0580025827.01.T01:intron 35.0%
ATGGGAACTAAAGCTTGATA+TGG + Chr5:24822145-24822164 MsG0580025827.01.T01:CDS 35.0%
ATGTGAATGTGACAGATTCT+TGG + Chr5:24816979-24816998 MsG0580025827.01.T01:CDS 35.0%
ATTCCAATATCACGACTAAG+AGG + Chr5:24820870-24820889 MsG0580025827.01.T01:intron 35.0%
ATTCCTCTTAGTCGTGATAT+TGG - Chr5:24820876-24820895 None:intergenic 35.0%
ATTGTGAGTATCTCTGTCAA+GGG + Chr5:24822654-24822673 MsG0580025827.01.T01:intron 35.0%
CAAAGTGCAGAGAAAGTTAA+GGG - Chr5:24819316-24819335 None:intergenic 35.0%
CTTAGTCGTGATATTGGAAT+TGG - Chr5:24820870-24820889 None:intergenic 35.0%
CTTTACTAGGTAATTGGTGT+TGG + Chr5:24817315-24817334 MsG0580025827.01.T01:intron 35.0%
CTTTGAACTCTATCAGATTC+TGG - Chr5:24817789-24817808 None:intergenic 35.0%
GAATGTATCTTGAAGATTGG+TGG - Chr5:24821802-24821821 None:intergenic 35.0%
GAGGTCTATATATCAACCTT+AGG - Chr5:24816340-24816359 None:intergenic 35.0%
GCATAGGAAAGATTAATCAG+AGG - Chr5:24818720-24818739 None:intergenic 35.0%
GGAAAGGGATTCAAAACTTA+GGG + Chr5:24823698-24823717 MsG0580025827.01.T01:CDS 35.0%
GGATACTTATCTACAGAGAA+AGG - Chr5:24818348-24818367 None:intergenic 35.0%
GTACTATGCGCATGAAATAT+TGG + Chr5:24818275-24818294 MsG0580025827.01.T01:intron 35.0%
GTAGTCACAACTAATTGCAT+AGG - Chr5:24818736-24818755 None:intergenic 35.0%
GTATAAAAGAGACGTTGTAG+TGG + Chr5:24818111-24818130 MsG0580025827.01.T01:intron 35.0%
GTGAGAAAAACACAAAAAGG+GGG + Chr5:24817717-24817736 MsG0580025827.01.T01:intron 35.0%
GTGTGGTGAAAGAATTTGAT+GGG + Chr5:24817656-24817675 MsG0580025827.01.T01:intron 35.0%
GTTGATATGGTTAATGTCCT+AGG + Chr5:24818189-24818208 MsG0580025827.01.T01:intron 35.0%
TAAATGGAGGCAAAACATCA+AGG + Chr5:24821533-24821552 MsG0580025827.01.T01:intron 35.0%
TATTGGAGTAGTAGAGATAG+TGG + Chr5:24818292-24818311 MsG0580025827.01.T01:intron 35.0%
TCAGCACAGATAATGACTTA+TGG + Chr5:24819661-24819680 MsG0580025827.01.T01:intron 35.0%
TCCACTTACACCATAAAAGA+GGG - Chr5:24816662-24816681 None:intergenic 35.0%
TGAAGACACAAATATGCAGA+GGG - Chr5:24818418-24818437 None:intergenic 35.0%
TGAGAAAAACACAAAAAGGG+GGG + Chr5:24817718-24817737 MsG0580025827.01.T01:intron 35.0%
TGAGGCTCGAAAGTTAAAAA+AGG + Chr5:24816538-24816557 MsG0580025827.01.T01:intron 35.0%
TGGGAACTAAAGCTTGATAT+GGG + Chr5:24822146-24822165 MsG0580025827.01.T01:CDS 35.0%
TGTCCATTAGTTATAAGGAC+CGG + Chr5:24822772-24822791 MsG0580025827.01.T01:intron 35.0%
TGTGCTATGTTTAAACCGAT+CGG + Chr5:24823421-24823440 MsG0580025827.01.T01:CDS 35.0%
TGTGGTATTCCTTCTTATCT+TGG + Chr5:24822698-24822717 MsG0580025827.01.T01:intron 35.0%
TGTGGTGAAAGAATTTGATG+GGG + Chr5:24817657-24817676 MsG0580025827.01.T01:intron 35.0%
TTATGTGTGCCAAGATAAGA+AGG - Chr5:24822710-24822729 None:intergenic 35.0%
TTCCAAAACTTCCTTTCTCT+TGG + Chr5:24819612-24819631 MsG0580025827.01.T01:intron 35.0%
TTGAAGACACAAATATGCAG+AGG - Chr5:24818419-24818438 None:intergenic 35.0%
TTGATCTCTGACCACAATTA+AGG - Chr5:24822120-24822139 None:intergenic 35.0%
TTTATGGTGTAAGTGGATGT+TGG + Chr5:24816665-24816684 MsG0580025827.01.T01:CDS 35.0%
TTTGATTGGATGCATGTACA+AGG + Chr5:24816388-24816407 MsG0580025827.01.T01:intron 35.0%
! AAGAAATTTTCGTTGGAGAG+GGG + Chr5:24816739-24816758 MsG0580025827.01.T01:CDS 35.0%
! AAGATCCCTTTTGTGTATCT+TGG + Chr5:24817041-24817060 MsG0580025827.01.T01:CDS 35.0%
! AGTATCTTTTTGTGGTAGAG+AGG + Chr5:24822514-24822533 MsG0580025827.01.T01:intron 35.0%
! ATCCAAGAGAAAGGAAGTTT+TGG - Chr5:24819617-24819636 None:intergenic 35.0%
! CACATTCGGCTTTTGTTAAA+GGG + Chr5:24816471-24816490 MsG0580025827.01.T01:intron 35.0%
! CCTGTTGATAAACAAAGCTA+AGG - Chr5:24819133-24819152 None:intergenic 35.0%
! CTAAAATCAGTCAAGCATTG+AGG - Chr5:24816359-24816378 None:intergenic 35.0%
! GAAGAAATTTTCGTTGGAGA+GGG + Chr5:24816738-24816757 MsG0580025827.01.T01:CDS 35.0%
! GGCCTTTTCTCTTCTTTTAT+TGG + Chr5:24819274-24819293 MsG0580025827.01.T01:intron 35.0%
! GTATCTTTTTGTGGTAGAGA+GGG + Chr5:24822515-24822534 MsG0580025827.01.T01:intron 35.0%
! GTTGTTGTTGTTGTTCAAAG+TGG + Chr5:24816571-24816590 MsG0580025827.01.T01:intron 35.0%
! GTTTTCCCGCTACATATTTT+AGG + Chr5:24822010-24822029 MsG0580025827.01.T01:intron 35.0%
! TATCTTTTTGTGGTAGAGAG+GGG + Chr5:24822516-24822535 MsG0580025827.01.T01:intron 35.0%
! TCACATTCGGCTTTTGTTAA+AGG + Chr5:24816470-24816489 MsG0580025827.01.T01:intron 35.0%
! TCTTTTTGCTTGCTCTCATA+GGG + Chr5:24819341-24819360 MsG0580025827.01.T01:intron 35.0%
! TGAAGAAATTTTCGTTGGAG+AGG + Chr5:24816737-24816756 MsG0580025827.01.T01:CDS 35.0%
! TTAAGTTGTGACTGTCATGA+TGG + Chr5:24817094-24817113 MsG0580025827.01.T01:intron 35.0%
! TTCTTTTTGCTTGCTCTCAT+AGG + Chr5:24819340-24819359 MsG0580025827.01.T01:intron 35.0%
! TTTAGTAGCGCGTAATTTTG+AGG + Chr5:24817376-24817395 MsG0580025827.01.T01:intron 35.0%
! TTTTATAGGTTTGGGTAAGG+AGG + Chr5:24817251-24817270 MsG0580025827.01.T01:intron 35.0%
!! CCTTAGCTTTGTTTATCAAC+AGG + Chr5:24819130-24819149 MsG0580025827.01.T01:intron 35.0%
!! CTCAATGCTTGACTGATTTT+AGG + Chr5:24816357-24816376 MsG0580025827.01.T01:intron 35.0%
!! TATGATATGTTTTGAGTGGG+TGG - Chr5:24819438-24819457 None:intergenic 35.0%
!! TTTTTGGTACACTATTGGGA+TGG + Chr5:24822249-24822268 MsG0580025827.01.T01:intron 35.0%
!!! TTGTACTTGCACTGATTTTC+AGG + Chr5:24819749-24819768 MsG0580025827.01.T01:intron 35.0%
AAAACAGCATAGAGAGAGAG+AGG + Chr5:24818912-24818931 MsG0580025827.01.T01:intron 40.0%
AAACAGCATAGAGAGAGAGA+GGG + Chr5:24818913-24818932 MsG0580025827.01.T01:intron 40.0%
AAAGGGAGACAGATCCTTAA+TGG + Chr5:24816488-24816507 MsG0580025827.01.T01:intron 40.0%
AACAGGCAATAGCTGCAATA+GGG + Chr5:24823347-24823366 MsG0580025827.01.T01:intron 40.0%
AATCTGTGTGAAATGAGCCA+AGG + Chr5:24821090-24821109 MsG0580025827.01.T01:intron 40.0%
AATTTGATGGGGGTTCACAA+AGG + Chr5:24817668-24817687 MsG0580025827.01.T01:intron 40.0%
ACGGTGAAGATTATTCCGAT+CGG - Chr5:24823439-24823458 None:intergenic 40.0%
AGCCAAGGGGTCAAATAAAT+TGG + Chr5:24821105-24821124 MsG0580025827.01.T01:intron 40.0%
AGCTAATAAGGTGGTAGATG+AGG + Chr5:24816520-24816539 MsG0580025827.01.T01:intron 40.0%
AGGGGTCAAATAAATTGGGA+CGG + Chr5:24821110-24821129 MsG0580025827.01.T01:intron 40.0%
ATCTGTGTGAAATGAGCCAA+GGG + Chr5:24821091-24821110 MsG0580025827.01.T01:intron 40.0%
ATGTCAGCAATGGTTGAGTT+TGG + Chr5:24816771-24816790 MsG0580025827.01.T01:CDS 40.0%
ATTTGATGGGGGTTCACAAA+GGG + Chr5:24817669-24817688 MsG0580025827.01.T01:intron 40.0%
CAAAAGTGAAAGCTGGAATG+AGG - Chr5:24819732-24819751 None:intergenic 40.0%
CCAAAGTGCAGAGAAAGTTA+AGG - Chr5:24819317-24819336 None:intergenic 40.0%
CCTTAACTTTCTCTGCACTT+TGG + Chr5:24819314-24819333 MsG0580025827.01.T01:intron 40.0%
CGAAATGGAAGGCTAGAAAA+GGG + Chr5:24816286-24816305 MsG0580025827.01.T01:CDS 40.0%
CGGAAGAAAAAGTTGGGAAA+GGG + Chr5:24823683-24823702 MsG0580025827.01.T01:CDS 40.0%
CTGAGTTTCATCGAAATGGA+AGG + Chr5:24816275-24816294 MsG0580025827.01.T01:CDS 40.0%
CTTGATTCTATGTGATGCCA+TGG + Chr5:24821561-24821580 MsG0580025827.01.T01:intron 40.0%
GAAAATGGGTCAGATATTCC+GGG - Chr5:24820922-24820941 None:intergenic 40.0%
GAATAATGACCTTTGCCTCA+GGG - Chr5:24819494-24819513 None:intergenic 40.0%
GAATGTGACAGATTCTTGGT+TGG + Chr5:24816983-24817002 MsG0580025827.01.T01:CDS 40.0%
GATATCACCACTCCAATGAT+TGG - Chr5:24820840-24820859 None:intergenic 40.0%
GATATGGTTAATGTCCTAGG+AGG + Chr5:24818192-24818211 MsG0580025827.01.T01:intron 40.0%
GATTGAGGAAATGTCAGCAA+TGG + Chr5:24816761-24816780 MsG0580025827.01.T01:CDS 40.0%
GCAAGTACAAAAGTGAAAGC+TGG - Chr5:24819739-24819758 None:intergenic 40.0%
GCACAGATAATGACTTATGG+TGG + Chr5:24819664-24819683 MsG0580025827.01.T01:intron 40.0%
GCCAAGGGGTCAAATAAATT+GGG + Chr5:24821106-24821125 MsG0580025827.01.T01:intron 40.0%
GGAACTATAGTATCAATGGC+TGG + Chr5:24821748-24821767 MsG0580025827.01.T01:intron 40.0%
GGAGACCAAGATACACAAAA+GGG - Chr5:24817049-24817068 None:intergenic 40.0%
GGGAAAGGGATTCAAAACTT+AGG + Chr5:24823697-24823716 MsG0580025827.01.T01:CDS 40.0%
GGGAACTAAAGCTTGATATG+GGG + Chr5:24822147-24822166 MsG0580025827.01.T01:CDS 40.0%
GTAAGGAGGTTGAAGGTTAA+GGG + Chr5:24817265-24817284 MsG0580025827.01.T01:intron 40.0%
GTCAAATAAATTGGGACGGA+GGG + Chr5:24821114-24821133 MsG0580025827.01.T01:intron 40.0%
GTGGTGAAAGAATTTGATGG+GGG + Chr5:24817658-24817677 MsG0580025827.01.T01:intron 40.0%
GTGTATCTTGGTCTCCATTA+TGG + Chr5:24817053-24817072 MsG0580025827.01.T01:CDS 40.0%
GTTTGTCATGTCTTCTCTTC+CGG + Chr5:24817161-24817180 MsG0580025827.01.T01:intron 40.0%
TAAAAGAAGAGAAAAGGCCG+AGG - Chr5:24819273-24819292 None:intergenic 40.0%
TAACAGGCAATAGCTGCAAT+AGG + Chr5:24823346-24823365 MsG0580025827.01.T01:intron 40.0%
TAGTTCCTATTGCTTTGGCT+TGG - Chr5:24821735-24821754 None:intergenic 40.0%
TCCCAATTTATTTGACCCCT+TGG - Chr5:24821110-24821129 None:intergenic 40.0%
TCGAAATGGAAGGCTAGAAA+AGG + Chr5:24816285-24816304 MsG0580025827.01.T01:CDS 40.0%
TCGGAAGAAAAAGTTGGGAA+AGG + Chr5:24823682-24823701 MsG0580025827.01.T01:CDS 40.0%
TCTGAATCCAATCATTGGAG+TGG + Chr5:24820830-24820849 MsG0580025827.01.T01:intron 40.0%
TGAATGATGAAGGGAGGTAA+GGG + Chr5:24817409-24817428 MsG0580025827.01.T01:intron 40.0%
TGATTGGACTTATCCAGATG+CGG + Chr5:24816617-24816636 MsG0580025827.01.T01:intron 40.0%
TGGAGACCAAGATACACAAA+AGG - Chr5:24817050-24817069 None:intergenic 40.0%
TGGCGTGTTATGGTTAGTAA+GGG + Chr5:24817491-24817510 MsG0580025827.01.T01:intron 40.0%
TGTCCGGTCCTTATAACTAA+TGG - Chr5:24822778-24822797 None:intergenic 40.0%
TTCACAAAGGGAGTGGTTTA+GGG + Chr5:24817681-24817700 MsG0580025827.01.T01:intron 40.0%
TTCAGTAACGACATTGGTGA+TGG + Chr5:24816698-24816717 MsG0580025827.01.T01:CDS 40.0%
TTGAATGATGAAGGGAGGTA+AGG + Chr5:24817408-24817427 MsG0580025827.01.T01:intron 40.0%
TTGTGAGTATCTCTGTCAAG+GGG + Chr5:24822655-24822674 MsG0580025827.01.T01:intron 40.0%
TTTGAAGGAGGTGAAACAGA+CGG + Chr5:24816183-24816202 MsG0580025827.01.T01:CDS 40.0%
! AACACGGCAGTATCTTTTTG+TGG + Chr5:24822506-24822525 MsG0580025827.01.T01:intron 40.0%
! AGGATTTTATGCCGTGCAAT+GGG + Chr5:24823651-24823670 MsG0580025827.01.T01:CDS 40.0%
! CTAGGAGACGACTTTTATCT+TGG + Chr5:24823478-24823497 MsG0580025827.01.T01:CDS 40.0%
! GAGACGACTTTTATCTTGGA+AGG + Chr5:24823482-24823501 MsG0580025827.01.T01:CDS 40.0%
! GGTGATAAAAGTTGGACTAG+TGG + Chr5:24816876-24816895 MsG0580025827.01.T01:intron 40.0%
! TAGGATTTTATGCCGTGCAA+TGG + Chr5:24823650-24823669 MsG0580025827.01.T01:CDS 40.0%
! TCCCTCTTTTATGGTGTAAG+TGG + Chr5:24816658-24816677 MsG0580025827.01.T01:CDS 40.0%
! TGAATGATGGAAGGAAGGAA+GGG + Chr5:24817630-24817649 MsG0580025827.01.T01:intron 40.0%
! TTGAATGATGGAAGGAAGGA+AGG + Chr5:24817629-24817648 MsG0580025827.01.T01:intron 40.0%
! TTTAGCTCAAAGTGGAAGCA+TGG + Chr5:24819020-24819039 MsG0580025827.01.T01:intron 40.0%
! TTTTCGGTGAGACAACTTGT+TGG - Chr5:24822440-24822459 None:intergenic 40.0%
!! ACGACATTGGTGATGGTAAA+TGG + Chr5:24816705-24816724 MsG0580025827.01.T01:CDS 40.0%
!! GATTGGTGCTGTTATAATCG+TGG + Chr5:24823627-24823646 MsG0580025827.01.T01:CDS 40.0%
!! GGGTTTTCAAGAAGCTTAGT+TGG - Chr5:24818572-24818591 None:intergenic 40.0%
!! TACTAGGTAATTGGTGTTGG+AGG + Chr5:24817318-24817337 MsG0580025827.01.T01:intron 40.0%
AAAGTTGTAGTGGCGCGTTA+TGG + Chr5:24817592-24817611 MsG0580025827.01.T01:CDS 45.0%
AACAGCATAGAGAGAGAGAG+GGG + Chr5:24818914-24818933 MsG0580025827.01.T01:intron 45.0%
AAGTGGATGTTGGAATGTGC+CGG + Chr5:24816675-24816694 MsG0580025827.01.T01:CDS 45.0%
AGCATTGCAGATGCAAGAGT+AGG - Chr5:24819706-24819725 None:intergenic 45.0%
AGCTACAACTGTGTCTCTAC+TGG - Chr5:24818254-24818273 None:intergenic 45.0%
AGTAGCCAAGCCAAAGCAAT+AGG + Chr5:24821727-24821746 MsG0580025827.01.T01:intron 45.0%
AGTGCAGAGAAAGTTAAGGG+AGG - Chr5:24819313-24819332 None:intergenic 45.0%
ATAAGGACCGGACAACATTC+AGG + Chr5:24822784-24822803 MsG0580025827.01.T01:intron 45.0%
ATCTGTGCTGAAGATCTGCA+AGG - Chr5:24819652-24819671 None:intergenic 45.0%
ATGTGGTCCTGAATGTTGTC+CGG - Chr5:24822794-24822813 None:intergenic 45.0%
CACCAATGTCGTTACTGAAC+CGG - Chr5:24816697-24816716 None:intergenic 45.0%
CAGAGAAAGAGAGAGATGGT+GGG + Chr5:24818937-24818956 MsG0580025827.01.T01:intron 45.0%
CCTCAGGGAAAAGTCGATTA+TGG - Chr5:24819479-24819498 None:intergenic 45.0%
CTACAGAGAAAGGAGAGTGA+AGG - Chr5:24818338-24818357 None:intergenic 45.0%
GACTAGTGGTTGTTCTATGC+AGG + Chr5:24816890-24816909 MsG0580025827.01.T01:intron 45.0%
GAGGTTGAAGGTTAAGGGTA+AGG + Chr5:24817270-24817289 MsG0580025827.01.T01:intron 45.0%
GGAATAATGACCTTTGCCTC+AGG - Chr5:24819495-24819514 None:intergenic 45.0%
GGAGGATGCATGTAGATAGA+GGG + Chr5:24817336-24817355 MsG0580025827.01.T01:intron 45.0%
GGTAAGGAGGTTGAAGGTTA+AGG + Chr5:24817264-24817283 MsG0580025827.01.T01:intron 45.0%
GGTCAAATAAATTGGGACGG+AGG + Chr5:24821113-24821132 MsG0580025827.01.T01:intron 45.0%
GGTCAGAGATCAAAGTGCAT+GGG + Chr5:24822127-24822146 MsG0580025827.01.T01:CDS 45.0%
GGTTAAGGGTAAGGAAGATG+AGG + Chr5:24817279-24817298 MsG0580025827.01.T01:intron 45.0%
GTGGCGTGTTATGGTTAGTA+AGG + Chr5:24817490-24817509 MsG0580025827.01.T01:intron 45.0%
GTTCACAAAGGGAGTGGTTT+AGG + Chr5:24817680-24817699 MsG0580025827.01.T01:intron 45.0%
TAAGGGAAGAAGCAAGATGC+TGG - Chr5:24819115-24819134 None:intergenic 45.0%
TAGTGGTTGTTCTATGCAGG+TGG + Chr5:24816893-24816912 MsG0580025827.01.T01:intron 45.0%
TCACAAAGGGAGTGGTTTAG+GGG + Chr5:24817682-24817701 MsG0580025827.01.T01:intron 45.0%
TCTGTGTGAAATGAGCCAAG+GGG + Chr5:24821092-24821111 MsG0580025827.01.T01:intron 45.0%
TGCAGCTATTGCCTGTTAAC+AGG - Chr5:24823344-24823363 None:intergenic 45.0%
TGGAGGATGCATGTAGATAG+AGG + Chr5:24817335-24817354 MsG0580025827.01.T01:intron 45.0%
TGGATGCATGTACAAGGTGT+TGG + Chr5:24816394-24816413 MsG0580025827.01.T01:intron 45.0%
TGGTCAGAGATCAAAGTGCA+TGG + Chr5:24822126-24822145 MsG0580025827.01.T01:CDS 45.0%
! AGACTCTGACAGTCAGCTTT+TGG + Chr5:24818509-24818528 MsG0580025827.01.T01:intron 45.0%
! GGAGGATGCATGTTGATAGA+GGG + Chr5:24817557-24817576 MsG0580025827.01.T01:CDS 45.0%
! GGATTTTATGCCGTGCAATG+GGG + Chr5:24823652-24823671 MsG0580025827.01.T01:CDS 45.0%
! GGGAGTGTATGCCTTAATTG+TGG + Chr5:24822106-24822125 MsG0580025827.01.T01:CDS 45.0%
! TCGGTTGAATGATGGAAGGA+AGG + Chr5:24817625-24817644 MsG0580025827.01.T01:intron 45.0%
! TCTGACAGTCAGCTTTTGGA+TGG + Chr5:24818513-24818532 MsG0580025827.01.T01:intron 45.0%
! TGGAGGATGCATGTTGATAG+AGG + Chr5:24817556-24817575 MsG0580025827.01.T01:CDS 45.0%
! TTGGGAGGGTTTTTATGTGC+TGG + Chr5:24821871-24821890 MsG0580025827.01.T01:intron 45.0%
! TTTTGTGGTAGAGAGGGGTA+GGG + Chr5:24822521-24822540 MsG0580025827.01.T01:intron 45.0%
! TTTTTGTGGTAGAGAGGGGT+AGG + Chr5:24822520-24822539 MsG0580025827.01.T01:intron 45.0%
!! AGGAAGTGTCGGTTGAATGA+TGG + Chr5:24817617-24817636 MsG0580025827.01.T01:intron 45.0%
!! AGTAGCGCGTAATTTTGAGG+AGG + Chr5:24817379-24817398 MsG0580025827.01.T01:intron 45.0%
!! AGTGTCGGTTGAATGATGGA+AGG + Chr5:24817621-24817640 MsG0580025827.01.T01:intron 45.0%
!! CCATAATCGACTTTTCCCTG+AGG + Chr5:24819476-24819495 MsG0580025827.01.T01:intron 45.0%
!! GGTGCTGTTATAATCGTGGT+AGG + Chr5:24823631-24823650 MsG0580025827.01.T01:CDS 45.0%
!! GTAGCGCGTAATTTTGAGGA+GGG + Chr5:24817380-24817399 MsG0580025827.01.T01:intron 45.0%
!! TAGCGCGTAATTTTGAGGAG+GGG + Chr5:24817381-24817400 MsG0580025827.01.T01:intron 45.0%
!! AGAATTAATAAAATAAAAAA+GGG - Chr5:24819159-24819178 None:intergenic 5.0%
!! ATAATATACAAAAAAAATTT+AGG - Chr5:24822411-24822430 None:intergenic 5.0%
!! TTTAATATTAAAAAATAGTA+CGG - Chr5:24823199-24823218 None:intergenic 5.0%
!!! AAATTTATAAAACTTTTAAA+TGG + Chr5:24821517-24821536 MsG0580025827.01.T01:intron 5.0%
!!! ATATTAAAATGTTTTTTTAT+AGG + Chr5:24817237-24817256 MsG0580025827.01.T01:intron 5.0%
!!! TAAATTTTTTTTGTATATTA+TGG + Chr5:24822410-24822429 MsG0580025827.01.T01:intron 5.0%
!!! TACTTTTTTTTATAAATTTA+TGG - Chr5:24822894-24822913 None:intergenic 5.0%
AACTTGTGCATAGCCGCATC+TGG - Chr5:24816633-24816652 None:intergenic 50.0%
AGGAGGTGAAACAGACGGTT+TGG + Chr5:24816188-24816207 MsG0580025827.01.T01:CDS 50.0%
AGGGGTCGGTTGAATGATGA+AGG + Chr5:24817399-24817418 MsG0580025827.01.T01:intron 50.0%
AGGTAAGGGTCAATGTGCTG+AGG + Chr5:24817423-24817442 MsG0580025827.01.T01:intron 50.0%
AGTGGTGCGTTATGTGAGGA+AGG + Chr5:24817449-24817468 MsG0580025827.01.T01:intron 50.0%
ATGGGTCAGATATTCCGGGA+CGG - Chr5:24820918-24820937 None:intergenic 50.0%
CAAGATGCTGGAAAGTCCCA+TGG - Chr5:24819103-24819122 None:intergenic 50.0%
GACAGATTCTTGGTTGGCAG+AGG + Chr5:24816989-24817008 MsG0580025827.01.T01:CDS 50.0%
GCAGAGAAAGAGAGAGATGG+TGG + Chr5:24818936-24818955 MsG0580025827.01.T01:intron 50.0%
GGAAGGTTAGTGGCGTGTTA+TGG + Chr5:24817481-24817500 MsG0580025827.01.T01:intron 50.0%
GGAGGTGAAACAGACGGTTT+GGG + Chr5:24816189-24816208 MsG0580025827.01.T01:CDS 50.0%
GGGGTCGGTTGAATGATGAA+GGG + Chr5:24817400-24817419 MsG0580025827.01.T01:intron 50.0%
GGTAAGGGTCAATGTGCTGA+GGG + Chr5:24817424-24817443 MsG0580025827.01.T01:intron 50.0%
GGTTAGTGGTGCGTTATGTG+AGG + Chr5:24817445-24817464 MsG0580025827.01.T01:intron 50.0%
GGTTTGGGTAAGGAGGTTGA+AGG + Chr5:24817258-24817277 MsG0580025827.01.T01:intron 50.0%
GTCAATGTGCTGAGGGTTAG+TGG + Chr5:24817431-24817450 MsG0580025827.01.T01:intron 50.0%
GTCGGTTGAATGATGAAGGG+AGG + Chr5:24817403-24817422 MsG0580025827.01.T01:intron 50.0%
GTGGGATGGCTGAACTTGAA+TGG + Chr5:24818955-24818974 MsG0580025827.01.T01:intron 50.0%
GTGGTGCGTTATGTGAGGAA+GGG + Chr5:24817450-24817469 MsG0580025827.01.T01:intron 50.0%
TTGGTTGGCAGAGGCAGTAA+TGG + Chr5:24816998-24817017 MsG0580025827.01.T01:CDS 50.0%
TTTCGTTGGAGAGGGGATTG+AGG + Chr5:24816746-24816765 MsG0580025827.01.T01:CDS 50.0%
! AGCTCAAAGTGGAAGCATGG+TGG + Chr5:24819023-24819042 MsG0580025827.01.T01:intron 50.0%
! GCGTTATGGTGAGGAAGTGT+CGG + Chr5:24817606-24817625 MsG0580025827.01.T01:CDS 50.0%
! TCGACTTTTCCCTGAGGCAA+AGG + Chr5:24819482-24819501 MsG0580025827.01.T01:intron 50.0%
!! GAAAGAGAGAGATGGTGGGA+TGG + Chr5:24818941-24818960 MsG0580025827.01.T01:intron 50.0%
!! GCGTAATTTTGAGGAGGGGT+CGG + Chr5:24817385-24817404 MsG0580025827.01.T01:intron 50.0%
!! TGCCGGTTCAGTAACGACAT+TGG + Chr5:24816692-24816711 MsG0580025827.01.T01:CDS 50.0%
ACATGGTGCGTGCAAAGAGC+TGG + Chr5:24823388-24823407 MsG0580025827.01.T01:CDS 55.0%
ATGGGGGTTCACAAAGGGAG+TGG + Chr5:24817674-24817693 MsG0580025827.01.T01:intron 55.0%
ATGTGAGGAAGGGCTCTGTG+AGG + Chr5:24817460-24817479 MsG0580025827.01.T01:intron 55.0%
CGAAGCTTTGCCCCATTGCA+CGG - Chr5:24823665-24823684 None:intergenic 55.0%
CGTGCAATGGGGCAAAGCTT+CGG + Chr5:24823663-24823682 MsG0580025827.01.T01:CDS 55.0%
CTTTGATACTCCCTCCGTCC+CGG + Chr5:24820901-24820920 MsG0580025827.01.T01:intron 55.0%
GAAGGAAGGAAGGGTCAGTG+TGG + Chr5:24817639-24817658 MsG0580025827.01.T01:intron 55.0%
GGCTCTGTGAGGAAGGTTAG+TGG + Chr5:24817471-24817490 MsG0580025827.01.T01:intron 55.0%
GGGGCAGAGAAAGAGAGAGA+TGG + Chr5:24818933-24818952 MsG0580025827.01.T01:intron 55.0%
GTCAGATATTCCGGGACGGA+GGG - Chr5:24820914-24820933 None:intergenic 55.0%
TGTAGTGGCGCGTTATGGTG+AGG + Chr5:24817597-24817616 MsG0580025827.01.T01:CDS 55.0%
GAGGAAGGGCTCTGTGAGGA+AGG + Chr5:24817464-24817483 MsG0580025827.01.T01:intron 60.0%
GGTCAGATATTCCGGGACGG+AGG - Chr5:24820915-24820934 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 24816112 24823868 24816112 ID=MsG0580025827.01;Name=MsG0580025827.01
Chr5 mRNA 24816112 24823868 24816112 ID=MsG0580025827.01.T01;Parent=MsG0580025827.01;Name=MsG0580025827.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0.33|0.42|1|1|0.85|7|106|356
Chr5 exon 24816112 24816307 24816112 ID=MsG0580025827.01.T01:exon:4933;Parent=MsG0580025827.01.T01
Chr5 exon 24816634 24816812 24816634 ID=MsG0580025827.01.T01:exon:4934;Parent=MsG0580025827.01.T01
Chr5 exon 24816912 24817074 24816912 ID=MsG0580025827.01.T01:exon:4935;Parent=MsG0580025827.01.T01
Chr5 exon 24817545 24817627 24817545 ID=MsG0580025827.01.T01:exon:4936;Parent=MsG0580025827.01.T01
Chr5 exon 24822032 24822190 24822032 ID=MsG0580025827.01.T01:exon:4937;Parent=MsG0580025827.01.T01
Chr5 exon 24823352 24823503 24823352 ID=MsG0580025827.01.T01:exon:4938;Parent=MsG0580025827.01.T01
Chr5 exon 24823624 24823868 24823624 ID=MsG0580025827.01.T01:exon:4939;Parent=MsG0580025827.01.T01
Chr5 CDS 24816112 24816307 24816112 ID=MsG0580025827.01.T01:cds;Parent=MsG0580025827.01.T01
Chr5 CDS 24816634 24816812 24816634 ID=MsG0580025827.01.T01:cds;Parent=MsG0580025827.01.T01
Chr5 CDS 24816912 24817074 24816912 ID=MsG0580025827.01.T01:cds;Parent=MsG0580025827.01.T01
Chr5 CDS 24817545 24817627 24817545 ID=MsG0580025827.01.T01:cds;Parent=MsG0580025827.01.T01
Chr5 CDS 24822032 24822190 24822032 ID=MsG0580025827.01.T01:cds;Parent=MsG0580025827.01.T01
Chr5 CDS 24823352 24823503 24823352 ID=MsG0580025827.01.T01:cds;Parent=MsG0580025827.01.T01
Chr5 CDS 24823624 24823762 24823624 ID=MsG0580025827.01.T01:cds;Parent=MsG0580025827.01.T01
Chr5 three_prime_UTR 24823763 24823868 24823763 ID=MsG0580025827.01.T01:three_prime_utr;Parent=MsG0580025827.01.T01
Gene Sequence

>MsG0580025827.01.T01

ATGTTGGTTGAAAACTTGCAGTATAAAACTCCAAGTAATATGGAGTCAAGATATTTGATTAAATCTTTTAGTTTGAAGGAGGTGAAACAGACGGTTTGGGATTGTGATAGTTTTATCAAGTATTTTTGGGAGGAAATTAAAGATGATATGTTGCGCTTTATCACTGAGTTTCATCGAAATGGAAGGCTAGAAAAGGATGCGGCTATGCACAAGTTGAATTTCCCTCTTTTATGGTGTAAGTGGATGTTGGAATGTGCCGGTTCAGTAACGACATTGGTGATGGTAAATGGAAGTTATGCTGAAGAAATTTTCGTTGGAGAGGGGATTGAGGAAATGTCAGCAATGGTTGAGTTTGGTCTTTTCACAAGTTATAAGGTGGATCTTATTCTATTTGAAGCTATAACAGGTTTGACAATCAATTTTAACAAAAGTATGTTGATGGATGTGAATGTGACAGATTCTTGGTTGGCAGAGGCAGTAATGGTTATGAATTTTAAAACCGAGAAGATCCCTTTTGTGTATCTTGGTCTCCATTATGGTAATTGGTGTTGGAGGATGCATGTTGATAGAGGGATTTTATGGTATAAAGTTGTAGTGGCGCGTTATGGTGAGGAAGTGTCGGTTTCAGTAACAAAGAAATACCCTGCTGTAATAGTCATAGTCTTCTTCCAAGTCTTATTTATCACAATTCAAACGGGAGTGTATGCCTTAATTGTGGTCAGAGATCAAAGTGCATGGGAACTAAAGCTTGATATGGGGTTGATTGTCATTTTATACCAGGCAATAGCTGCAATAGGGATTCGATACTTGTTACAAACATGGTGCGTGCAAAGAGCTGGTCCTCTATTTTGTGCTATGTTTAAACCGATCGGAATAATCTTCACCGTTTTTTTGGGTTCAATTTTTCTAGGAGACGACTTTTATCTTGGAAGTTTGATTGGTGCTGTTATAATCGTGGTAGGATTTTATGCCGTGCAATGGGGCAAAGCTTCGGAAGAAAAAGTTGGGAAAGGGATTCAAAACTTAGGGACACAGTCCAATGTTGTTCCATTGTTACAAAACAAAGTATAA

Protein sequence

>MsG0580025827.01.T01

MLVENLQYKTPSNMESRYLIKSFSLKEVKQTVWDCDSFIKYFWEEIKDDMLRFITEFHRNGRLEKDAAMHKLNFPLLWCKWMLECAGSVTTLVMVNGSYAEEIFVGEGIEEMSAMVEFGLFTSYKVDLILFEAITGLTINFNKSMLMDVNVTDSWLAEAVMVMNFKTEKIPFVYLGLHYGNWCWRMHVDRGILWYKVVVARYGEEVSVSVTKKYPAVIVIVFFQVLFITIQTGVYALIVVRDQSAWELKLDMGLIVILYQAIAAIGIRYLLQTWCVQRAGPLFCAMFKPIGIIFTVFLGSIFLGDDFYLGSLIGAVIIVVGFYAVQWGKASEEKVGKGIQNLGTQSNVVPLLQNKV*