AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030762.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030762.01.T01 MTR_6g012170 92.500 320 24 0 1 320 1 320 0.0 569
MsG0680030762.01.T01 MTR_6g012160 94.218 294 17 0 1 294 1 294 0.0 526
MsG0680030762.01.T01 MTR_8g064610 68.790 314 97 1 7 320 72 384 3.74e-155 439
MsG0680030762.01.T01 MTR_7g034395 72.492 309 85 0 12 320 9 317 1.28e-148 421
MsG0680030762.01.T01 MTR_6g012140 89.362 141 15 0 179 319 3 143 2.66e-86 256
MsG0680030762.01.T01 MTR_8g035630 45.659 311 163 5 12 320 5 311 2.52e-85 260
MsG0680030762.01.T01 MTR_8g035880 46.254 307 159 5 12 316 5 307 7.92e-85 259
MsG0680030762.01.T01 MTR_1319s0010 70.093 107 32 0 73 179 3 109 4.01e-41 139
MsG0680030762.01.T01 MTR_4g036310 35.258 329 175 11 16 317 11 328 6.01e-37 135
MsG0680030762.01.T01 MTR_7g055743 32.335 334 175 11 13 317 57 368 1.93e-35 132
MsG0680030762.01.T01 MTR_4g032995 32.803 314 174 8 32 318 26 329 4.86e-35 130
MsG0680030762.01.T01 MTR_4g033205 32.484 314 175 7 32 318 26 329 6.24e-35 130
MsG0680030762.01.T01 MTR_6g012100 90.323 62 6 0 259 320 8 69 6.63e-34 119
MsG0680030762.01.T01 MTR_2g078520 30.183 328 183 10 26 316 40 358 1.67e-29 115
MsG0680030762.01.T01 MTR_4g036260 32.727 275 149 6 70 318 44 308 3.77e-29 114
MsG0680030762.01.T01 MTR_2g012420 30.675 326 178 13 24 316 13 323 1.53e-27 110
MsG0680030762.01.T01 MTR_4g050760 29.755 326 181 12 24 316 13 323 9.56e-27 107
MsG0680030762.01.T01 MTR_2g012380 29.755 326 181 12 24 316 13 323 9.56e-27 107
MsG0680030762.01.T01 MTR_2g012380 31.304 230 136 7 32 251 20 237 2.98e-23 97.1
MsG0680030762.01.T01 MTR_4g086400 25.392 319 185 9 38 316 315 620 6.70e-19 87.8
MsG0680030762.01.T01 MTR_4g086400 25.392 319 185 9 38 316 175 480 7.39e-19 87.4
MsG0680030762.01.T01 MTR_4g086410 25.078 319 186 9 38 316 315 620 1.37e-18 86.7
MsG0680030762.01.T01 MTR_4g036170 30.037 273 149 8 70 316 46 302 2.70e-18 84.0
MsG0680030762.01.T01 MTR_6g039950 56.061 66 29 0 6 71 14 79 4.37e-18 77.8
MsG0680030762.01.T01 MTR_3g093620 28.527 319 178 11 35 316 30 335 1.43e-15 76.6
MsG0680030762.01.T01 MTR_2g012420 29.897 194 96 9 157 316 4 191 3.13e-14 70.5
MsG0680030762.01.T01 MTR_2g095840 31.034 203 124 6 11 208 40 231 2.66e-12 67.4
MsG0680030762.01.T01 MTR_8g095220 23.711 388 203 15 7 316 50 422 2.34e-11 64.7
MsG0680030762.01.T02 MTR_6g012170 92.500 320 24 0 1 320 1 320 0.0 569
MsG0680030762.01.T02 MTR_6g012160 94.218 294 17 0 1 294 1 294 0.0 526
MsG0680030762.01.T02 MTR_8g064610 68.790 314 97 1 7 320 72 384 3.74e-155 439
MsG0680030762.01.T02 MTR_7g034395 72.492 309 85 0 12 320 9 317 1.28e-148 421
MsG0680030762.01.T02 MTR_6g012140 89.362 141 15 0 179 319 3 143 2.66e-86 256
MsG0680030762.01.T02 MTR_8g035630 45.659 311 163 5 12 320 5 311 2.52e-85 260
MsG0680030762.01.T02 MTR_8g035880 46.254 307 159 5 12 316 5 307 7.92e-85 259
MsG0680030762.01.T02 MTR_1319s0010 70.093 107 32 0 73 179 3 109 4.01e-41 139
MsG0680030762.01.T02 MTR_4g036310 35.258 329 175 11 16 317 11 328 6.01e-37 135
MsG0680030762.01.T02 MTR_7g055743 32.335 334 175 11 13 317 57 368 1.93e-35 132
MsG0680030762.01.T02 MTR_4g032995 32.803 314 174 8 32 318 26 329 4.86e-35 130
MsG0680030762.01.T02 MTR_4g033205 32.484 314 175 7 32 318 26 329 6.24e-35 130
MsG0680030762.01.T02 MTR_6g012100 90.323 62 6 0 259 320 8 69 6.63e-34 119
MsG0680030762.01.T02 MTR_2g078520 30.183 328 183 10 26 316 40 358 1.67e-29 115
MsG0680030762.01.T02 MTR_4g036260 32.727 275 149 6 70 318 44 308 3.77e-29 114
MsG0680030762.01.T02 MTR_2g012420 30.675 326 178 13 24 316 13 323 1.53e-27 110
MsG0680030762.01.T02 MTR_4g050760 29.755 326 181 12 24 316 13 323 9.56e-27 107
MsG0680030762.01.T02 MTR_2g012380 29.755 326 181 12 24 316 13 323 9.56e-27 107
MsG0680030762.01.T02 MTR_2g012380 31.304 230 136 7 32 251 20 237 2.98e-23 97.1
MsG0680030762.01.T02 MTR_4g086400 25.392 319 185 9 38 316 315 620 6.70e-19 87.8
MsG0680030762.01.T02 MTR_4g086400 25.392 319 185 9 38 316 175 480 7.39e-19 87.4
MsG0680030762.01.T02 MTR_4g086410 25.078 319 186 9 38 316 315 620 1.37e-18 86.7
MsG0680030762.01.T02 MTR_4g036170 30.037 273 149 8 70 316 46 302 2.70e-18 84.0
MsG0680030762.01.T02 MTR_6g039950 56.061 66 29 0 6 71 14 79 4.37e-18 77.8
MsG0680030762.01.T02 MTR_3g093620 28.527 319 178 11 35 316 30 335 1.43e-15 76.6
MsG0680030762.01.T02 MTR_2g012420 29.897 194 96 9 157 316 4 191 3.13e-14 70.5
MsG0680030762.01.T02 MTR_2g095840 31.034 203 124 6 11 208 40 231 2.66e-12 67.4
MsG0680030762.01.T02 MTR_8g095220 23.711 388 203 15 7 316 50 422 2.34e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030762.01.T01 AT1G23740 64.444 315 111 1 6 320 73 386 7.30e-143 409
MsG0680030762.01.T01 AT4G13010 32.808 317 172 9 31 318 25 329 6.46e-34 127
MsG0680030762.01.T01 AT3G15090 32.685 257 159 8 1 251 22 270 9.43e-29 114
MsG0680030762.01.T01 AT4G21580 28.438 320 182 10 31 317 19 324 8.33e-27 108
MsG0680030762.01.T01 AT4G21580 27.900 319 179 10 31 317 19 318 1.17e-25 104
MsG0680030762.01.T01 AT3G56460 29.595 321 174 12 33 316 31 336 7.14e-22 94.7
MsG0680030762.01.T01 AT4G21580 27.536 276 154 9 75 317 29 291 2.92e-20 89.4
MsG0680030762.01.T01 AT1G49670 26.625 323 182 11 35 320 316 620 1.04e-18 87.0
MsG0680030762.01.T01 AT1G49670 25.872 344 181 11 35 320 316 643 6.44e-18 84.7
MsG0680030762.01.T01 AT3G45770 28.522 291 180 9 11 284 45 324 1.05e-16 80.5
MsG0680030762.01.T01 AT5G63620 24.746 295 155 10 20 251 54 344 4.29e-11 63.9
MsG0680030762.01.T01 AT5G63620 24.746 295 155 10 20 251 54 344 4.53e-11 63.9
MsG0680030762.01.T02 AT1G23740 64.444 315 111 1 6 320 73 386 7.30e-143 409
MsG0680030762.01.T02 AT4G13010 32.808 317 172 9 31 318 25 329 6.46e-34 127
MsG0680030762.01.T02 AT3G15090 32.685 257 159 8 1 251 22 270 9.43e-29 114
MsG0680030762.01.T02 AT4G21580 28.438 320 182 10 31 317 19 324 8.33e-27 108
MsG0680030762.01.T02 AT4G21580 27.900 319 179 10 31 317 19 318 1.17e-25 104
MsG0680030762.01.T02 AT3G56460 29.595 321 174 12 33 316 31 336 7.14e-22 94.7
MsG0680030762.01.T02 AT4G21580 27.536 276 154 9 75 317 29 291 2.92e-20 89.4
MsG0680030762.01.T02 AT1G49670 26.625 323 182 11 35 320 316 620 1.04e-18 87.0
MsG0680030762.01.T02 AT1G49670 25.872 344 181 11 35 320 316 643 6.44e-18 84.7
MsG0680030762.01.T02 AT3G45770 28.522 291 180 9 11 284 45 324 1.05e-16 80.5
MsG0680030762.01.T02 AT5G63620 24.746 295 155 10 20 251 54 344 4.29e-11 63.9
MsG0680030762.01.T02 AT5G63620 24.746 295 155 10 20 251 54 344 4.53e-11 63.9

Find 24 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAGCACTTGATCTTCTT+TGG 0.141686 6:+8717269 None:intergenic
TCTTAATCTCTACAGGATTA+AGG 0.246732 6:+8717229 None:intergenic
ATGAGCACTTGATCTTCTTT+GGG 0.250377 6:+8717270 None:intergenic
AGAGGGCTCTTGGTCAGTTC+AGG 0.298541 6:-8717209 MsG0680030762.01.T01:CDS
GCTTGGGTTTACTCTCAATA+TGG 0.331206 6:-8717342 MsG0680030762.01.T01:CDS
GGGTGTGGTGTAGGTACATT+AGG 0.332918 6:+8717291 None:intergenic
CTTAATCTCTACAGGATTAA+GGG 0.395475 6:+8717230 None:intergenic
TCCATCTCATACAAAAGCTT+GGG 0.417415 6:-8717358 MsG0680030762.01.T01:CDS
TTAATCCTGTAGAGATTAAG+AGG 0.426865 6:-8717227 MsG0680030762.01.T01:CDS
TTCCATCTCATACAAAAGCT+TGG 0.442056 6:-8717359 MsG0680030762.01.T01:CDS
ACTTGATCTTCTTTGGGGTG+TGG 0.459077 6:+8717276 None:intergenic
TCTTAATACCAAAGTGATCA+TGG 0.463405 6:-8717397 MsG0680030762.01.T01:exon
TCTTCTTTGGGGTGTGGTGT+AGG 0.483182 6:+8717282 None:intergenic
GAGGGCTCTTGGTCAGTTCA+GGG 0.485391 6:-8717208 MsG0680030762.01.T01:CDS
AGAGCCCTCTTAATCTCTAC+AGG 0.491966 6:+8717222 None:intergenic
GTAGAGATTAAGAGGGCTCT+TGG 0.511719 6:-8717219 MsG0680030762.01.T01:CDS
TTTGTATGAGATGGAATACT+TGG 0.527250 6:+8717366 None:intergenic
TGAGCACTTGATCTTCTTTG+GGG 0.535877 6:+8717271 None:intergenic
TCAAGTGCTCATCAAGGTTG+TGG 0.539457 6:-8717259 MsG0680030762.01.T01:CDS
AATTGAAATCTTACTGGCAA+AGG 0.546364 6:+8717174 None:intergenic
TATAAAGTTGCACTTTGTGT+TGG 0.562451 6:+8717468 None:intergenic
AGAAGATCAAGTGCTCATCA+AGG 0.576535 6:-8717265 MsG0680030762.01.T01:CDS
TGTGCTTGCCATGATCACTT+TGG 0.591046 6:+8717389 None:intergenic
TAATCCTGTAGAGATTAAGA+GGG 0.687476 6:-8717226 MsG0680030762.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAAATTAAAAATTA+AGG - Chr6:8714888-8714907 MsG0680030762.01.T01:intron 0.0%
!! AAATTAAAATTAAAAATTAA+GGG - Chr6:8714889-8714908 MsG0680030762.01.T01:intron 0.0%
!! AATAAAATAATAAAATAATA+TGG - Chr6:8714501-8714520 MsG0680030762.01.T01:intron 0.0%
!! TATATAAAAAAATATTTAAT+AGG + Chr6:8716985-8717004 None:intergenic 0.0%
!!! ATAATAATAAATTTAATTTA+AGG + Chr6:8714840-8714859 None:intergenic 0.0%
!!! ATTTATTTTTAATTTAATTT+TGG - Chr6:8713534-8713553 MsG0680030762.01.T01:intron 0.0%
!!! TTTATTTTTAATTTAATTTT+GGG - Chr6:8713535-8713554 MsG0680030762.01.T01:intron 0.0%
!! AAAAAAAATAATGTTAAGAT+TGG + Chr6:8714051-8714070 None:intergenic 10.0%
!! AAAAAAATATTGTTAAAGAT+TGG + Chr6:8714240-8714259 None:intergenic 10.0%
!! AAAAATAAAAATTCATACTT+AGG + Chr6:8712415-8712434 None:intergenic 10.0%
!! GTAAAAATTATTTAATTATG+CGG + Chr6:8712860-8712879 None:intergenic 10.0%
!! TAAGAGAAAAATATATAAAA+AGG + Chr6:8712131-8712150 None:intergenic 10.0%
!!! GTATATTTATTTTTAAAACT+CGG - Chr6:8717398-8717417 MsG0680030762.01.T01:exon 10.0%
!!! TTTTTATATATTCCAAAAAT+AGG - Chr6:8716995-8717014 MsG0680030762.01.T01:intron 10.0%
!! AATATGAATTGAATAAAGAT+TGG + Chr6:8712835-8712854 None:intergenic 15.0%
!! ACTTAAATTATAATTACTAG+CGG - Chr6:8712916-8712935 MsG0680030762.01.T01:intron 15.0%
!! ATTTCAATTAACCTAATATA+TGG + Chr6:8712769-8712788 None:intergenic 15.0%
!! CAAAAAATAATGTTAAAGAT+TGG + Chr6:8714115-8714134 None:intergenic 15.0%
!! CAAAAAATATTGTTAAAGAT+TGG + Chr6:8714305-8714324 None:intergenic 15.0%
!! CAAAATATAATGTTAAAAAC+TGG + Chr6:8713924-8713943 None:intergenic 15.0%
!! TGGTTTATTTAAAAATATGT+TGG + Chr6:8713608-8713627 None:intergenic 15.0%
!! TTAGTTAAGAAAATAAATTC+TGG + Chr6:8712651-8712670 None:intergenic 15.0%
!! TTATAAACAAAATATTGTCA+AGG - Chr6:8713079-8713098 MsG0680030762.01.T01:intron 15.0%
!!! AAATCTTCTAAAAAAAGATT+AGG + Chr6:8713897-8713916 None:intergenic 15.0%
!!! AATTTATTTTCTTAACTAAG+TGG - Chr6:8712652-8712671 MsG0680030762.01.T01:intron 15.0%
!!! ACATATTTTAAAGGTAAAAA+AGG + Chr6:8713704-8713723 None:intergenic 15.0%
!!! ATACTGAAACAATTTTAATA+TGG + Chr6:8716324-8716343 None:intergenic 15.0%
!!! CATATTTTAAAGGTAAAAAA+GGG + Chr6:8713703-8713722 None:intergenic 15.0%
!!! TGTTAATAATCTTTTTTTAG+AGG - Chr6:8714333-8714352 MsG0680030762.01.T01:CDS 15.0%
!!! TTAAAAATTAAGGGTAATTT+TGG - Chr6:8714898-8714917 MsG0680030762.01.T01:intron 15.0%
!!! TTACTAATCTTTTTTTTTAG+AGG - Chr6:8714270-8714289 MsG0680030762.01.T01:CDS 15.0%
!!! TTGTTACTAATTTTTTTTAG+AGG - Chr6:8714205-8714224 MsG0680030762.01.T01:CDS 15.0%
!!! TTTATCTTAATTTTATATGC+AGG + Chr6:8713147-8713166 None:intergenic 15.0%
!!! TTTTTTACCTTTAAAATATG+TGG - Chr6:8713703-8713722 MsG0680030762.01.T01:intron 15.0%
!! AAAAATTAGTAACAAACTTG+AGG + Chr6:8714011-8714030 None:intergenic 20.0%
!! AAGCAGTAATTATTGTTAAA+GGG + Chr6:8715353-8715372 None:intergenic 20.0%
!! AATAGTAAGAAAAGTTCATA+AGG - Chr6:8714795-8714814 MsG0680030762.01.T01:intron 20.0%
!! AATCAATTACATCAATTTCA+TGG - Chr6:8717291-8717310 MsG0680030762.01.T01:CDS 20.0%
!! ATTTAAAAATATGTTGGATG+TGG + Chr6:8713602-8713621 None:intergenic 20.0%
!! ATTTCAGTTAACCAAATATA+TGG - Chr6:8712583-8712602 MsG0680030762.01.T01:intron 20.0%
!! CAAAAAATAATGGTAAAGAT+TGG + Chr6:8714432-8714451 None:intergenic 20.0%
!! CAAAAACTAATGTTAAAGAT+TGG + Chr6:8714368-8714387 None:intergenic 20.0%
!! CATAATACAACATATTAACA+AGG + Chr6:8716920-8716939 None:intergenic 20.0%
!! GAAAAAATAACGTTAAAGAT+TGG + Chr6:8713989-8714008 None:intergenic 20.0%
!! GAATTGAAAAAAATATGTGA+AGG - Chr6:8715897-8715916 MsG0680030762.01.T01:intron 20.0%
!! GTGGAAGTAATAAAATAATA+TGG - Chr6:8714538-8714557 MsG0680030762.01.T01:intron 20.0%
!! TAAGCAGTAATTATTGTTAA+AGG + Chr6:8715354-8715373 None:intergenic 20.0%
!! TAATCATAACTTATATCAAC+AGG + Chr6:8713764-8713783 None:intergenic 20.0%
!! TTTAGTGTAATTATATGTGT+TGG + Chr6:8715732-8715751 None:intergenic 20.0%
!!! AATAAATTCTGGAAAAATAG+TGG + Chr6:8712640-8712659 None:intergenic 20.0%
!!! GTTACTAATCTTTTTTTTAG+AGG - Chr6:8714397-8714416 MsG0680030762.01.T01:CDS 20.0%
!!! TCCACATGTTATTTTATAAT+TGG - Chr6:8714770-8714789 MsG0680030762.01.T01:intron 20.0%
!!! TGTAGTATTTTATCATCTAA+TGG - Chr6:8716681-8716700 MsG0680030762.01.T01:intron 20.0%
!!! TGTTACTAATCTTTTTTTAG+AGG - Chr6:8714080-8714099 MsG0680030762.01.T01:intron 20.0%
!!! TGTTTTCTACTAAGTAAAAA+GGG - Chr6:8713496-8713515 MsG0680030762.01.T01:intron 20.0%
!!! TTCTAAAGATACTCTATATT+AGG - Chr6:8715476-8715495 MsG0680030762.01.T01:intron 20.0%
! AAAATGCAAATACAACACTT+TGG - Chr6:8716578-8716597 MsG0680030762.01.T01:intron 25.0%
! AACAAATTATGTTCTTCTAC+TGG - Chr6:8713808-8713827 MsG0680030762.01.T01:intron 25.0%
! AACCAGCTTATATTGAATAA+TGG + Chr6:8716638-8716657 None:intergenic 25.0%
! AACTCATTGAATTTGAATGA+AGG + Chr6:8716101-8716120 None:intergenic 25.0%
! AATAGCAAAACTTAGTCTAA+CGG - Chr6:8713468-8713487 MsG0680030762.01.T01:intron 25.0%
! ACAATAATTACTGCTTATCA+AGG - Chr6:8715357-8715376 MsG0680030762.01.T01:intron 25.0%
! ACAGATGTACAACATAAAAT+CGG - Chr6:8714632-8714651 MsG0680030762.01.T01:intron 25.0%
! ATTAAAGAAGTGAAAGTAGA+AGG + Chr6:8713319-8713338 None:intergenic 25.0%
! ATTGTTTCAGTATTAAAGAG+TGG - Chr6:8716331-8716350 MsG0680030762.01.T01:intron 25.0%
! CAAACGTGATCAAAAAATAA+TGG + Chr6:8714442-8714461 None:intergenic 25.0%
! CAAGGATTATTTATAAGTTG+TGG + Chr6:8717473-8717492 None:intergenic 25.0%
! CATTAGTAGTGTTTAAATTG+CGG - Chr6:8715943-8715962 MsG0680030762.01.T01:intron 25.0%
! CCACTATAAGCTAAATTTAT+TGG + Chr6:8716038-8716057 None:intergenic 25.0%
! GCCAATTATAAAATAACATG+TGG + Chr6:8714774-8714793 None:intergenic 25.0%
! TAATTCACATTAGCAATGAT+AGG - Chr6:8712517-8712536 MsG0680030762.01.T01:CDS 25.0%
! TAATTGATTATTCATGCTCA+TGG + Chr6:8717280-8717299 None:intergenic 25.0%
! TATTTACAAGCTGAAAAATG+TGG + Chr6:8712712-8712731 None:intergenic 25.0%
! TCACGAATTATTAGTCATAT+CGG - Chr6:8715763-8715782 MsG0680030762.01.T01:intron 25.0%
! TCGATCAAAGTATAATTACT+TGG + Chr6:8715868-8715887 None:intergenic 25.0%
! TGTGATATTGGAAGAAAAAT+TGG - Chr6:8715831-8715850 MsG0680030762.01.T01:intron 25.0%
! TTAAACAATCCAAAAACTGT+TGG - Chr6:8715243-8715262 MsG0680030762.01.T01:intron 25.0%
! TTACCATAAATAAGTCACAA+TGG + Chr6:8713450-8713469 None:intergenic 25.0%
! TTTCATATTCTTTCTTAGAC+TGG + Chr6:8717427-8717446 None:intergenic 25.0%
!! AATTTTCCAGAATAGTACAA+AGG - Chr6:8712786-8712805 MsG0680030762.01.T01:CDS 25.0%
!! AGATTGGATTTTAAATCTTC+TGG + Chr6:8713973-8713992 None:intergenic 25.0%
!! CAACAAAACTTGAATTTTTG+AGG - Chr6:8716780-8716799 MsG0680030762.01.T01:intron 25.0%
!! CCAATAAATTTAGCTTATAG+TGG - Chr6:8716035-8716054 MsG0680030762.01.T01:intron 25.0%
!! CTGTTTTCTACTAAGTAAAA+AGG - Chr6:8713495-8713514 MsG0680030762.01.T01:intron 25.0%
!! GTAATTATATGTGTTGGTAT+CGG + Chr6:8715726-8715745 None:intergenic 25.0%
!! TAATTATATGTGTTGGTATC+GGG + Chr6:8715725-8715744 None:intergenic 25.0%
!! TCTAATGGATAAGATGAAAA+GGG + Chr6:8716201-8716220 None:intergenic 25.0%
!! TGGAATGCAATTATTTGTTT+TGG - Chr6:8716701-8716720 MsG0680030762.01.T01:intron 25.0%
!! TTTTACACTAGCAATCAAAT+GGG - Chr6:8712874-8712893 MsG0680030762.01.T01:intron 25.0%
!! TTTTTACACTAGCAATCAAA+TGG - Chr6:8712873-8712892 MsG0680030762.01.T01:intron 25.0%
!!! ACTTGAATTTTTGAGGAAAT+TGG - Chr6:8716787-8716806 MsG0680030762.01.T01:intron 25.0%
!!! ATTTTTCAGCTTGTAAATAG+TGG - Chr6:8712713-8712732 MsG0680030762.01.T01:CDS 25.0%
!!! CTTGAATTTTTGAGGAAATT+GGG - Chr6:8716788-8716807 MsG0680030762.01.T01:intron 25.0%
!!! GTTTAATTTTGATACCTTGT+TGG + Chr6:8715054-8715073 None:intergenic 25.0%
!!! TAGGATAAATCTCTAAGATA+TGG - Chr6:8717355-8717374 MsG0680030762.01.T01:CDS 25.0%
!!! TATGGAAATACTGTTTTTTG+TGG - Chr6:8714519-8714538 MsG0680030762.01.T01:intron 25.0%
!!! TATGGAAATAGTGTTTTTTG+TGG - Chr6:8714556-8714575 MsG0680030762.01.T01:intron 25.0%
!!! TGTTGCTAATCTTTTTTTAG+AGG - Chr6:8714143-8714162 MsG0680030762.01.T01:CDS 25.0%
!!! TTAACTGAAATTTTTCAGAG+TGG + Chr6:8712574-8712593 None:intergenic 25.0%
!!! TTACCTTTAAAATATGTGGT+GGG - Chr6:8713707-8713726 MsG0680030762.01.T01:intron 25.0%
!!! TTATATGTAGCTTTATCAAG+AGG + Chr6:8713370-8713389 None:intergenic 25.0%
!!! TTTACCTTTAAAATATGTGG+TGG - Chr6:8713706-8713725 MsG0680030762.01.T01:intron 25.0%
AAACAAATCCACAAAAGTGA+AGG + Chr6:8716129-8716148 None:intergenic 30.0%
AAAGATTAGTAACAAACGTG+AGG + Chr6:8714074-8714093 None:intergenic 30.0%
AAATACTTGGCAATCTTTGT+TGG - Chr6:8714590-8714609 MsG0680030762.01.T01:intron 30.0%
AAGCTACATATAATTGACCA+TGG - Chr6:8713377-8713396 MsG0680030762.01.T01:intron 30.0%
AAGTTCTTCATAATTCTCCT+TGG + Chr6:8716837-8716856 None:intergenic 30.0%
AATAATCCATAGGTTTGATC+AGG - Chr6:8715555-8715574 MsG0680030762.01.T01:intron 30.0%
AATTGAAATCTTACTGGCAA+AGG + Chr6:8712381-8712400 None:intergenic 30.0%
ACAGTTTGAGAAAATGGAAA+GGG + Chr6:8717196-8717215 None:intergenic 30.0%
ACTAAAAAATTGTGGTCACA+CGG + Chr6:8712610-8712629 None:intergenic 30.0%
ACTTACTGAAAAGTTTGATG+TGG - Chr6:8716853-8716872 MsG0680030762.01.T01:intron 30.0%
AGAGAAATTGAAACCTTACT+TGG - Chr6:8717132-8717151 MsG0680030762.01.T01:intron 30.0%
AGAGCAAGTGAAGAAATTTA+AGG - Chr6:8715182-8715201 MsG0680030762.01.T01:intron 30.0%
ATAGATTCTGACATTGTGAA+TGG - Chr6:8713420-8713439 MsG0680030762.01.T01:intron 30.0%
ATAGCAAAACTTAGTCTAAC+GGG - Chr6:8713469-8713488 MsG0680030762.01.T01:intron 30.0%
ATGTTTCACAACAACATCAA+AGG - Chr6:8713673-8713692 MsG0680030762.01.T01:intron 30.0%
ATTATTCATGCTCATGGAAT+GGG + Chr6:8717274-8717293 None:intergenic 30.0%
ATTCATACTTAGGTCATAGA+TGG + Chr6:8712405-8712424 None:intergenic 30.0%
CAGTAATTATTGTTAAAGGG+AGG + Chr6:8715350-8715369 None:intergenic 30.0%
CTTAATCTCTACAGGATTAA+GGG + Chr6:8712325-8712344 None:intergenic 30.0%
GAGATTTACACCATCAAATA+TGG + Chr6:8716365-8716384 None:intergenic 30.0%
GATGGTAATTGAAATCTTAC+TGG + Chr6:8712387-8712406 None:intergenic 30.0%
GTCCATTATTCAATATAAGC+TGG - Chr6:8716633-8716652 MsG0680030762.01.T01:intron 30.0%
GTGTATTTGTGTGTTTATCT+AGG - Chr6:8717336-8717355 MsG0680030762.01.T01:CDS 30.0%
TAATCCTGTAGAGATTAAGA+GGG - Chr6:8712326-8712345 MsG0680030762.01.T01:CDS 30.0%
TACTAGAGCTTCATAGATAA+TGG + Chr6:8715660-8715679 None:intergenic 30.0%
TATAAAGTTGCACTTTGTGT+TGG + Chr6:8712087-8712106 None:intergenic 30.0%
TATAATTACTAGCGGAAAGA+CGG - Chr6:8712924-8712943 MsG0680030762.01.T01:intron 30.0%
TCAATACCAATAGAGCTATT+GGG - Chr6:8717233-8717252 MsG0680030762.01.T01:CDS 30.0%
TCTTAATACCAAAGTGATCA+TGG - Chr6:8712155-8712174 MsG0680030762.01.T01:intron 30.0%
TCTTAATCTCTACAGGATTA+AGG + Chr6:8712326-8712345 None:intergenic 30.0%
TGAGTCAAAGATGAATTGTT+TGG + Chr6:8715636-8715655 None:intergenic 30.0%
TTAATCCTGTAGAGATTAAG+AGG - Chr6:8712325-8712344 MsG0680030762.01.T01:CDS 30.0%
TTACATCAATTTCATGGCTT+TGG - Chr6:8717297-8717316 MsG0680030762.01.T01:CDS 30.0%
TTATTTCCTGATCAAACCTA+TGG + Chr6:8715564-8715583 None:intergenic 30.0%
TTCTTGGGAATTAAAGGATT+GGG + Chr6:8715525-8715544 None:intergenic 30.0%
TTGAAACCTTACTTGGAAAA+TGG - Chr6:8717139-8717158 MsG0680030762.01.T01:intron 30.0%
TTTCTTGGGAATTAAAGGAT+TGG + Chr6:8715526-8715545 None:intergenic 30.0%
TTTGTATGAGATGGAATACT+TGG + Chr6:8712189-8712208 None:intergenic 30.0%
! AAAAATAGGTGATAGTGAGA+GGG - Chr6:8717009-8717028 MsG0680030762.01.T01:intron 30.0%
! AGTGTTGTTGAACTGATTAA+TGG - Chr6:8716168-8716187 MsG0680030762.01.T01:intron 30.0%
! CAAGTGAAGAAATTTAAGGT+TGG - Chr6:8715186-8715205 MsG0680030762.01.T01:intron 30.0%
! CGTTTGTTACAATTGATCAA+AGG - Chr6:8714456-8714475 MsG0680030762.01.T01:intron 30.0%
! CTCTAATGGATAAGATGAAA+AGG + Chr6:8716202-8716221 None:intergenic 30.0%
! GAAAGAGTTGAATTTTCTTC+TGG - Chr6:8715384-8715403 MsG0680030762.01.T01:intron 30.0%
! GTGTGTGTTCTATTTTATGT+GGG + Chr6:8715924-8715943 None:intergenic 30.0%
! TAACTAAGTGGAAAGTATAG+TGG - Chr6:8712664-8712683 MsG0680030762.01.T01:intron 30.0%
! TGTGTGTGTTCTATTTTATG+TGG + Chr6:8715925-8715944 None:intergenic 30.0%
! TTCTTCTTTCTTTTGTGTTG+TGG - Chr6:8715108-8715127 MsG0680030762.01.T01:intron 30.0%
!! AAAAACTGTTGGTTCTTTGT+CGG - Chr6:8715254-8715273 MsG0680030762.01.T01:intron 30.0%
!! AATCTTTGTTGGTTGTTTTG+AGG - Chr6:8714601-8714620 MsG0680030762.01.T01:intron 30.0%
!! AATTTTTCAGAGTGGTACAA+AGG + Chr6:8712566-8712585 None:intergenic 30.0%
!! ATTTTTCAGAGTGGTACAAA+GGG + Chr6:8712565-8712584 None:intergenic 30.0%
!! TAATTTGTTGTCATTTGACG+AGG + Chr6:8713797-8713816 None:intergenic 30.0%
!! TATCCCACCACATATTTTAA+AGG + Chr6:8713713-8713732 None:intergenic 30.0%
!! TATTTTCCCAATAGCTCTAT+TGG + Chr6:8717242-8717261 None:intergenic 30.0%
!!! ATCTTTGTTGGTTGTTTTGA+GGG - Chr6:8714602-8714621 MsG0680030762.01.T01:intron 30.0%
!!! ATTATTAGAGTCGCTTTTCT+TGG + Chr6:8715541-8715560 None:intergenic 30.0%
!!! GAAATAGTGTTTTTTGTGGA+AGG - Chr6:8714560-8714579 MsG0680030762.01.T01:intron 30.0%
!!! TTATTAGAGTCGCTTTTCTT+GGG + Chr6:8715540-8715559 None:intergenic 30.0%
!!! TTTTTTGTGAGTCTGATATG+TGG - Chr6:8714694-8714713 MsG0680030762.01.T01:intron 30.0%
AAAATGGAAAGGGACTCTTA+GGG + Chr6:8717186-8717205 None:intergenic 35.0%
AAATCTCTACTTGTTCTTGC+AGG - Chr6:8715408-8715427 MsG0680030762.01.T01:intron 35.0%
AAGCGACTCTAATAATCCAT+AGG - Chr6:8715545-8715564 MsG0680030762.01.T01:intron 35.0%
AAGGTTGGAGATGAAGTTTA+TGG - Chr6:8715201-8715220 MsG0680030762.01.T01:intron 35.0%
AATCAGTTCAACAACACTTG+TGG + Chr6:8716166-8716185 None:intergenic 35.0%
ACTCAACCTAGTAACAACTT+CGG - Chr6:8716526-8716545 MsG0680030762.01.T01:intron 35.0%
ATAATTACTAGCGGAAAGAC+GGG - Chr6:8712925-8712944 MsG0680030762.01.T01:intron 35.0%
ATGAGCACTTGATCTTCTTT+GGG + Chr6:8712285-8712304 None:intergenic 35.0%
ATGGTATTGTTACCACTCTT+TGG + Chr6:8716305-8716324 None:intergenic 35.0%
ATGTCAGAATCTATCTTCCA+CGG + Chr6:8713414-8713433 None:intergenic 35.0%
CACAGTTTGAGAAAATGGAA+AGG + Chr6:8717197-8717216 None:intergenic 35.0%
CACCAATGTTCCAACAAATA+CGG + Chr6:8715813-8715832 None:intergenic 35.0%
CCATAAATAAGTCACAATGG+CGG + Chr6:8713447-8713466 None:intergenic 35.0%
CTCAATACCAATAGAGCTAT+TGG - Chr6:8717232-8717251 MsG0680030762.01.T01:CDS 35.0%
CTTGGCAATTGATTATACCA+AGG - Chr6:8716817-8716836 MsG0680030762.01.T01:intron 35.0%
GATTATTCATGCTCATGGAA+TGG + Chr6:8717275-8717294 None:intergenic 35.0%
GCTCTAGTATTTCTCAGATT+AGG - Chr6:8715671-8715690 MsG0680030762.01.T01:intron 35.0%
GTCACGCAACTAAAAAATTG+TGG + Chr6:8712618-8712637 None:intergenic 35.0%
TACACTCCTTTGTACTATTC+TGG + Chr6:8712795-8712814 None:intergenic 35.0%
TATGGTGATATCAATGAGAC+TGG - Chr6:8715219-8715238 MsG0680030762.01.T01:intron 35.0%
TCAAAAAACACACCAAAGAG+TGG - Chr6:8716290-8716309 MsG0680030762.01.T01:intron 35.0%
TCAGCAAAACTCAAGTTTGA+TGG + Chr6:8715318-8715337 None:intergenic 35.0%
TCAGTATTAAAGAGTGGTCT+TGG - Chr6:8716337-8716356 MsG0680030762.01.T01:intron 35.0%
TCCATCTCATACAAAAGCTT+GGG - Chr6:8712194-8712213 MsG0680030762.01.T01:three_prime_UTR 35.0%
TGAAACATAGACCCTAGATA+TGG + Chr6:8713661-8713680 None:intergenic 35.0%
TGAGTCTGATATGTGGTTAA+CGG - Chr6:8714701-8714720 MsG0680030762.01.T01:intron 35.0%
TGGCAAAGTGAAACCAATAT+TGG - Chr6:8717159-8717178 MsG0680030762.01.T01:intron 35.0%
TTACAACATTGCTTCCTGTT+AGG - Chr6:8713572-8713591 MsG0680030762.01.T01:intron 35.0%
TTCCATCTCATACAAAAGCT+TGG - Chr6:8712193-8712212 MsG0680030762.01.T01:three_prime_UTR 35.0%
TTCCGATTGGAACAAATCTT+TGG + Chr6:8715598-8715617 None:intergenic 35.0%
TTCCTAAACTCAATTGCTCA+AGG + Chr6:8713739-8713758 None:intergenic 35.0%
TTCCTTGAGCAATTGAGTTT+AGG - Chr6:8713734-8713753 MsG0680030762.01.T01:intron 35.0%
TTGGAACATTGGTGTGATAT+TGG - Chr6:8715819-8715838 MsG0680030762.01.T01:intron 35.0%
! AGCTCTATTGGTATTGAGAT+AGG + Chr6:8717230-8717249 None:intergenic 35.0%
! CAAAAATAGGTGATAGTGAG+AGG - Chr6:8717008-8717027 MsG0680030762.01.T01:intron 35.0%
! CTCTCACTATCACCTATTTT+TGG + Chr6:8717010-8717029 None:intergenic 35.0%
! CTTTCCATTTTCTCAAACTG+TGG - Chr6:8717195-8717214 MsG0680030762.01.T01:CDS 35.0%
! GAAATCGTTTGATTTCCGAT+TGG + Chr6:8715611-8715630 None:intergenic 35.0%
! GACAAAGAACCAACAGTTTT+TGG + Chr6:8715255-8715274 None:intergenic 35.0%
! GACCAAAGATTTGTTCCAAT+CGG - Chr6:8715593-8715612 MsG0680030762.01.T01:intron 35.0%
! GGAAGGCATATGAAAATACT+TGG - Chr6:8714577-8714596 MsG0680030762.01.T01:intron 35.0%
!! GAATAATGGACTATGAAGCA+CGG + Chr6:8716624-8716643 None:intergenic 35.0%
!! GTTTGTTTCCTTCACTTTTG+TGG - Chr6:8716118-8716137 MsG0680030762.01.T01:intron 35.0%
!! TCGCTTTTCTTGGGAATTAA+AGG + Chr6:8715531-8715550 None:intergenic 35.0%
!! TGTTGGATCTCTTGTTATTC+AGG - Chr6:8715440-8715459 MsG0680030762.01.T01:intron 35.0%
!! TTTTTCAGAGTGGTACAAAG+GGG + Chr6:8712564-8712583 None:intergenic 35.0%
!!! ACTTTGCCATTTTCCAAGTA+AGG + Chr6:8717148-8717167 None:intergenic 35.0%
!!! CTGTGTTTGTTTTATCCTGT+AGG - Chr6:8716427-8716446 MsG0680030762.01.T01:intron 35.0%
!!! TCTTTGTTGGTTGTTTTGAG+GGG - Chr6:8714603-8714622 MsG0680030762.01.T01:intron 35.0%
!!! TGTTTGTTTTATCCTGTAGG+CGG - Chr6:8716430-8716449 MsG0680030762.01.T01:intron 35.0%
AGAAGATCAAGTGCTCATCA+AGG - Chr6:8712287-8712306 MsG0680030762.01.T01:intron 40.0%
AGATGCCTCAAAAACATGCT+TGG + Chr6:8716738-8716757 None:intergenic 40.0%
ATCCATTAGAGTAACTGCTG+CGG - Chr6:8716211-8716230 MsG0680030762.01.T01:intron 40.0%
CATAACACAGGCCATATCTA+GGG - Chr6:8713647-8713666 MsG0680030762.01.T01:intron 40.0%
CATATCGGCATGTTAATGTC+CGG - Chr6:8715778-8715797 MsG0680030762.01.T01:intron 40.0%
CATCTACCGAAGTTGTTACT+AGG + Chr6:8716535-8716554 None:intergenic 40.0%
CATTAACGCAGTAGAAAGAG+CGG + Chr6:8712970-8712989 None:intergenic 40.0%
CCGCCATTGTGACTTATTTA+TGG - Chr6:8713444-8713463 MsG0680030762.01.T01:intron 40.0%
CGGAGGTAAAAGAGGATTAA+CGG - Chr6:8714721-8714740 MsG0680030762.01.T01:intron 40.0%
CTAGATATGGCCTGTGTTAT+GGG + Chr6:8713648-8713667 None:intergenic 40.0%
GAAAATGGAAAGGGACTCTT+AGG + Chr6:8717187-8717206 None:intergenic 40.0%
GACAGTGTAAAACACCAACA+AGG - Chr6:8715037-8715056 MsG0680030762.01.T01:intron 40.0%
GAGGTAAAAGAGGATTAACG+GGG - Chr6:8714723-8714742 MsG0680030762.01.T01:intron 40.0%
GATGAGCACTTGATCTTCTT+TGG + Chr6:8712286-8712305 None:intergenic 40.0%
GCTTCCACAGTTTGAGAAAA+TGG + Chr6:8717202-8717221 None:intergenic 40.0%
GCTTGGGTTTACTCTCAATA+TGG - Chr6:8712210-8712229 MsG0680030762.01.T01:three_prime_UTR 40.0%
GGAGGTAAAAGAGGATTAAC+GGG - Chr6:8714722-8714741 MsG0680030762.01.T01:intron 40.0%
GGTCACACAGACCATATATT+AGG - Chr6:8712755-8712774 MsG0680030762.01.T01:CDS 40.0%
GGTCTTGGTACCATATTTGA+TGG - Chr6:8716352-8716371 MsG0680030762.01.T01:intron 40.0%
GTGAAAGTAGAAGGAGAAGA+TGG + Chr6:8713310-8713329 None:intergenic 40.0%
TGAGCACTTGATCTTCTTTG+GGG + Chr6:8712284-8712303 None:intergenic 40.0%
TTGGATGTGGAAATCCTAAC+AGG + Chr6:8713589-8713608 None:intergenic 40.0%
! AACCCAAAAGTGTGCTGAAA+GGG - Chr6:8714933-8714952 MsG0680030762.01.T01:intron 40.0%
! ACAAAGGGGTGTACACATTA+AGG + Chr6:8712550-8712569 None:intergenic 40.0%
! ACCCAAGCTTTTGTATGAGA+TGG + Chr6:8712198-8712217 None:intergenic 40.0%
! AGTCTGCCTTGCACAATTTT+GGG - Chr6:8716463-8716482 MsG0680030762.01.T01:intron 40.0%
! CAAAGGGGTGTACACATTAA+GGG + Chr6:8712549-8712568 None:intergenic 40.0%
! CATCTGAAGTGAGTACGAAA+GGG + Chr6:8717102-8717121 None:intergenic 40.0%
! GTCCGTATTTGTTGGAACAT+TGG - Chr6:8715808-8715827 MsG0680030762.01.T01:intron 40.0%
! TAACCCAAAAGTGTGCTGAA+AGG - Chr6:8714932-8714951 MsG0680030762.01.T01:intron 40.0%
! TAGTCTGCCTTGCACAATTT+TGG - Chr6:8716462-8716481 MsG0680030762.01.T01:intron 40.0%
! TGTCATTTGACGAGGTTGAA+GGG + Chr6:8713789-8713808 None:intergenic 40.0%
! TTGTCATTTGACGAGGTTGA+AGG + Chr6:8713790-8713809 None:intergenic 40.0%
!! GCTCTCTTTAAGATGTTTCG+TGG + Chr6:8716494-8716513 None:intergenic 40.0%
!! GTTTTGACAATACTACCACC+TGG - Chr6:8717061-8717080 MsG0680030762.01.T01:intron 40.0%
!!! AGCACGGATACTGTTGTTTT+TGG + Chr6:8716608-8716627 None:intergenic 40.0%
ACAATCGTGTCCCATAACAC+AGG - Chr6:8713635-8713654 MsG0680030762.01.T01:intron 45.0%
ACACCAGCAACATCATATCC+TGG + Chr6:8715147-8715166 None:intergenic 45.0%
ACATCTTAAAGAGAGCGACC+TGG - Chr6:8716498-8716517 MsG0680030762.01.T01:intron 45.0%
AGAGCCCTCTTAATCTCTAC+AGG + Chr6:8712333-8712352 None:intergenic 45.0%
AGGATATGATGTTGCTGGTG+TGG - Chr6:8715146-8715165 MsG0680030762.01.T01:intron 45.0%
ATATGATGTTGCTGGTGTGG+TGG - Chr6:8715149-8715168 MsG0680030762.01.T01:intron 45.0%
CAAACACAGCTACAACTGTG+CGG + Chr6:8716416-8716435 None:intergenic 45.0%
CCATAACACAGGCCATATCT+AGG - Chr6:8713646-8713665 MsG0680030762.01.T01:intron 45.0%
CCTAGATATGGCCTGTGTTA+TGG + Chr6:8713649-8713668 None:intergenic 45.0%
CCTTTCGTACTCACTTCAGA+TGG - Chr6:8717100-8717119 MsG0680030762.01.T01:intron 45.0%
CTGAAGGCTGTAAATGAAGG+AGG - Chr6:8717034-8717053 MsG0680030762.01.T01:intron 45.0%
GATGTGGTGTATGATGCAGT+AGG - Chr6:8716869-8716888 MsG0680030762.01.T01:intron 45.0%
GCACTGAAGGCTGTAAATGA+AGG - Chr6:8717031-8717050 MsG0680030762.01.T01:intron 45.0%
GGACTCTTAGGGTCCAATAT+TGG + Chr6:8717175-8717194 None:intergenic 45.0%
GGTCACACGGACCATATATT+TGG + Chr6:8712597-8712616 None:intergenic 45.0%
GTAGAGATTAAGAGGGCTCT+TGG - Chr6:8712333-8712352 MsG0680030762.01.T01:CDS 45.0%
GTCATTTGACGAGGTTGAAG+GGG + Chr6:8713788-8713807 None:intergenic 45.0%
GTCTGATATGTGGTTAACGG+AGG - Chr6:8714704-8714723 MsG0680030762.01.T01:intron 45.0%
GTGGTTAACGGAGGTAAAAG+AGG - Chr6:8714713-8714732 MsG0680030762.01.T01:intron 45.0%
TCAAGTGCTCATCAAGGTTG+TGG - Chr6:8712293-8712312 MsG0680030762.01.T01:CDS 45.0%
TGTGCTTGCCATGATCACTT+TGG + Chr6:8712166-8712185 None:intergenic 45.0%
! ACCCAAAAGTGTGCTGAAAG+GGG - Chr6:8714934-8714953 MsG0680030762.01.T01:intron 45.0%
! ACCCCTTTCAGCACACTTTT+GGG + Chr6:8714938-8714957 None:intergenic 45.0%
! CCATCTGAAGTGAGTACGAA+AGG + Chr6:8717103-8717122 None:intergenic 45.0%
! TACCCCTTTCAGCACACTTT+TGG + Chr6:8714939-8714958 None:intergenic 45.0%
! TACTAGGTTGAGTCACAACC+AGG + Chr6:8716519-8716538 None:intergenic 45.0%
!! ACTTGATCTTCTTTGGGGTG+TGG + Chr6:8712279-8712298 None:intergenic 45.0%
!! GCTAGCCAAGCATGTTTTTG+AGG - Chr6:8716730-8716749 MsG0680030762.01.T01:intron 45.0%
AACGGGGACGATTAGTGACA+TGG - Chr6:8714739-8714758 MsG0680030762.01.T01:intron 50.0%
ACAAATACGGACACCGACAC+CGG + Chr6:8715800-8715819 None:intergenic 50.0%
AGTACGAAAGGGATAGCTGG+TGG + Chr6:8717091-8717110 None:intergenic 50.0%
CTACTTGTTCTTGCAGGTGC+TGG - Chr6:8715414-8715433 MsG0680030762.01.T01:intron 50.0%
CTATCAATCATGCCGCCTAC+AGG + Chr6:8716445-8716464 None:intergenic 50.0%
GAGGAAATTGGGAGCAGACT+TGG - Chr6:8716799-8716818 MsG0680030762.01.T01:intron 50.0%
GCACTGCCCAAAATTGTGCA+AGG + Chr6:8716472-8716491 None:intergenic 50.0%
GGCATGTTAATGTCCGGTGT+CGG - Chr6:8715784-8715803 MsG0680030762.01.T01:intron 50.0%
GGGACACGATTGTTATGTCG+TGG + Chr6:8713628-8713647 None:intergenic 50.0%
GGGTGTGGTGTAGGTACATT+AGG + Chr6:8712264-8712283 None:intergenic 50.0%
GGTCGCGCAACTGAAAAATG+TGG - Chr6:8712734-8712753 MsG0680030762.01.T01:CDS 50.0%
GTGAGTACGAAAGGGATAGC+TGG + Chr6:8717094-8717113 None:intergenic 50.0%
GTGCCAGGATATGATGTTGC+TGG - Chr6:8715141-8715160 MsG0680030762.01.T01:intron 50.0%
TGCCGCAGCAGTTACTCTAA+TGG + Chr6:8716216-8716235 None:intergenic 50.0%
! GTGTCGGTGTCCGTATTTGT+TGG - Chr6:8715800-8715819 MsG0680030762.01.T01:intron 50.0%
!! TCTTCTTTGGGGTGTGGTGT+AGG + Chr6:8712273-8712292 None:intergenic 50.0%
!! TGATAGTGAGAGGGCACTGA+AGG - Chr6:8717018-8717037 MsG0680030762.01.T01:intron 50.0%
AGAGGGCTCTTGGTCAGTTC+AGG - Chr6:8712343-8712362 MsG0680030762.01.T01:CDS 55.0%
ATAGCTGGTGGAGTTCCAGG+TGG + Chr6:8717079-8717098 None:intergenic 55.0%
CCATGGCTGAAAACATGCCG+TGG - Chr6:8713394-8713413 MsG0680030762.01.T01:intron 55.0%
GAGGGCTCTTGGTCAGTTCA+GGG - Chr6:8712344-8712363 MsG0680030762.01.T01:CDS 55.0%
GCACGAGACGTGTCAGACAT+CGG + Chr6:8715703-8715722 None:intergenic 55.0%
GCTGGTGTGGTGGTTAGTGT+GGG - Chr6:8715159-8715178 MsG0680030762.01.T01:intron 55.0%
TGCTGGTGTGGTGGTTAGTG+TGG - Chr6:8715158-8715177 MsG0680030762.01.T01:intron 55.0%
TGTGGTGTGAAGACTGTGCC+AGG - Chr6:8715126-8715145 MsG0680030762.01.T01:intron 55.0%
! CCACGGCATGTTTTCAGCCA+TGG + Chr6:8713397-8713416 None:intergenic 55.0%
!! CTTGTTCTTGCAGGTGCTGG+AGG - Chr6:8715417-8715436 MsG0680030762.01.T01:intron 55.0%
GGGATAGCTGGTGGAGTTCC+AGG + Chr6:8717082-8717101 None:intergenic 60.0%
!! CTTGCAGGTGCTGGAGGTGT+TGG - Chr6:8715423-8715442 MsG0680030762.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 8712066 8717508 8712066 ID=MsG0680030762.01;Name=MsG0680030762.01
Chr6 mRNA 8712066 8717508 8712066 ID=MsG0680030762.01.T01;Parent=MsG0680030762.01;Name=MsG0680030762.01.T01;_AED=0.44;_eAED=0.44;_QI=75|1|1|1|0.6|0.33|6|190|320
Chr6 exon 8717188 8717420 8717188 ID=MsG0680030762.01.T01:exon:7231;Parent=MsG0680030762.01.T01
Chr6 exon 8717454 8717508 8717454 ID=MsG0680030762.01.T01:exon:7230;Parent=MsG0680030762.01.T01
Chr6 five_prime_UTR 8717454 8717508 8717454 ID=MsG0680030762.01.T01:five_prime_utr;Parent=MsG0680030762.01.T01
Chr6 five_prime_UTR 8717401 8717420 8717401 ID=MsG0680030762.01.T01:five_prime_utr;Parent=MsG0680030762.01.T01
Chr6 CDS 8717188 8717400 8717188 ID=MsG0680030762.01.T01:cds;Parent=MsG0680030762.01.T01
Chr6 CDS 8714113 8714436 8714113 ID=MsG0680030762.01.T01:cds;Parent=MsG0680030762.01.T01
Chr6 CDS 8712684 8712843 8712684 ID=MsG0680030762.01.T01:cds;Parent=MsG0680030762.01.T01
Chr6 CDS 8712292 8712557 8712292 ID=MsG0680030762.01.T01:cds;Parent=MsG0680030762.01.T01
Chr6 three_prime_UTR 8712177 8712291 8712177 ID=MsG0680030762.01.T01:three_prime_utr;Parent=MsG0680030762.01.T01
Chr6 three_prime_UTR 8712066 8712140 8712066 ID=MsG0680030762.01.T01:three_prime_utr;Parent=MsG0680030762.01.T01
Chr6 mRNA 8712066 8717502 8712066 ID=MsG0680030762.01.T02;Parent=MsG0680030762.01;Name=MsG0680030762.01.T02;_AED=0.44;_eAED=0.44;_QI=102|1|1|1|0.75|0.6|5|190|320
Chr6 exon 8717188 8717502 8717188 ID=MsG0680030762.01.T02:exon:7236;Parent=MsG0680030762.01.T02
Chr6 five_prime_UTR 8717401 8717502 8717401 ID=MsG0680030762.01.T02:five_prime_utr;Parent=MsG0680030762.01.T02
Chr6 CDS 8717188 8717400 8717188 ID=MsG0680030762.01.T02:cds;Parent=MsG0680030762.01.T02
Chr6 CDS 8714113 8714436 8714113 ID=MsG0680030762.01.T02:cds;Parent=MsG0680030762.01.T02
Chr6 CDS 8712684 8712843 8712684 ID=MsG0680030762.01.T02:cds;Parent=MsG0680030762.01.T02
Chr6 CDS 8712292 8712557 8712292 ID=MsG0680030762.01.T02:cds;Parent=MsG0680030762.01.T02
Chr6 three_prime_UTR 8712177 8712291 8712177 ID=MsG0680030762.01.T02:three_prime_utr;Parent=MsG0680030762.01.T02
Chr6 three_prime_UTR 8712066 8712140 8712066 ID=MsG0680030762.01.T02:three_prime_utr;Parent=MsG0680030762.01.T02
Gene Sequence

>MsG0680030762.01.T01

ATGGCAAGCACACCAAGTATTCCATCTCATACAAAAGCTTGGGTTTACTCTCAATATGGTATCATAGAAGATGTTCTAAAGTTTGATCCTAATGTACCTACACCACACCCCAAAGAAGATCAAGTGCTCATCAAGGTTGTGGCTGCTGCCCTTAATCCTGTAGAGATTAAGAGGGCTCTTGGTCAGTTCAGGGATATTGACTCTCCTTTGCCAACTGTGCCAGGATATGATGTTGCTGGTGTGGTGGTTAGTGTGGGAGAGCAAGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCAATGAGACTGGTTTAAACAATCCAAAAACTGTTGGTTCTTTGTCGGAGTATACTGTTGCTGAAGAAAAAGTACTTGCTCACAAACCATCAAACTTGAGTTTTGCTGAAGCTGCTAGCCTCCCTTTAACAATAATTACTGCTTATCAAGGACTTGAAAGAGTTGAATTTTCTTCTGGTAAATCTCTACTTGTTCTTGCAGGTGCTGGAGGTGTTGGATCTCTTGTTATTCAGCTAGCCAAGCATGTTTTTGAGGCATCTAGAATTGCAGCTACTGCTAGCACAACAAAACTTGAATTTTTGAGGAAATTGGGAGCAGACTTGGCAATTGATTATACCAAGGAGAATTATGAAGAACTTACTGAAAAGTTTGATGTGGTGTATGATGCAGTAGGTGATAGTGAGAGGGCACTGAAGGCTGTAAATGAAGGAGGAAAAGTTTTGACAATACTACCACCTGGAACTCCACCAGCTATCCCTTTCGTACTCACTTCAGATGGAGCAGTGTTAGAGAAATTGAAACCTTACTTGGAAAATGGCAAAGTGAAACCAATATTGGACCCTAAGAGTCCCTTTCCATTTTCTCAAACTGTGGAAGCATTTACCTATCTCAATACCAATAGAGCTATTGGGAAAATAGTTATTCATCCCATTCCATGA

>MsG0680030762.01.T02

ATGGCAAGCACACCAAGTATTCCATCTCATACAAAAGCTTGGGTTTACTCTCAATATGGTATCATAGAAGATGTTCTAAAGTTTGATCCTAATGTACCTACACCACACCCCAAAGAAGATCAAGTGCTCATCAAGGTTGTGGCTGCTGCCCTTAATCCTGTAGAGATTAAGAGGGCTCTTGGTCAGTTCAGGGATATTGACTCTCCTTTGCCAACTGTGCCAGGATATGATGTTGCTGGTGTGGTGGTTAGTGTGGGAGAGCAAGTGAAGAAATTTAAGGTTGGAGATGAAGTTTATGGTGATATCAATGAGACTGGTTTAAACAATCCAAAAACTGTTGGTTCTTTGTCGGAGTATACTGTTGCTGAAGAAAAAGTACTTGCTCACAAACCATCAAACTTGAGTTTTGCTGAAGCTGCTAGCCTCCCTTTAACAATAATTACTGCTTATCAAGGACTTGAAAGAGTTGAATTTTCTTCTGGTAAATCTCTACTTGTTCTTGCAGGTGCTGGAGGTGTTGGATCTCTTGTTATTCAGCTAGCCAAGCATGTTTTTGAGGCATCTAGAATTGCAGCTACTGCTAGCACAACAAAACTTGAATTTTTGAGGAAATTGGGAGCAGACTTGGCAATTGATTATACCAAGGAGAATTATGAAGAACTTACTGAAAAGTTTGATGTGGTGTATGATGCAGTAGGTGATAGTGAGAGGGCACTGAAGGCTGTAAATGAAGGAGGAAAAGTTTTGACAATACTACCACCTGGAACTCCACCAGCTATCCCTTTCGTACTCACTTCAGATGGAGCAGTGTTAGAGAAATTGAAACCTTACTTGGAAAATGGCAAAGTGAAACCAATATTGGACCCTAAGAGTCCCTTTCCATTTTCTCAAACTGTGGAAGCATTTACCTATCTCAATACCAATAGAGCTATTGGGAAAATAGTTATTCATCCCATTCCATGA
Protein sequence

>MsG0680030762.01.T01

MASTPSIPSHTKAWVYSQYGIIEDVLKFDPNVPTPHPKEDQVLIKVVAAALNPVEIKRALGQFRDIDSPLPTVPGYDVAGVVVSVGEQVKKFKVGDEVYGDINETGLNNPKTVGSLSEYTVAEEKVLAHKPSNLSFAEAASLPLTIITAYQGLERVEFSSGKSLLVLAGAGGVGSLVIQLAKHVFEASRIAATASTTKLEFLRKLGADLAIDYTKENYEELTEKFDVVYDAVGDSERALKAVNEGGKVLTILPPGTPPAIPFVLTSDGAVLEKLKPYLENGKVKPILDPKSPFPFSQTVEAFTYLNTNRAIGKIVIHPIP*

>MsG0680030762.01.T02

MASTPSIPSHTKAWVYSQYGIIEDVLKFDPNVPTPHPKEDQVLIKVVAAALNPVEIKRALGQFRDIDSPLPTVPGYDVAGVVVSVGEQVKKFKVGDEVYGDINETGLNNPKTVGSLSEYTVAEEKVLAHKPSNLSFAEAASLPLTIITAYQGLERVEFSSGKSLLVLAGAGGVGSLVIQLAKHVFEASRIAATASTTKLEFLRKLGADLAIDYTKENYEELTEKFDVVYDAVGDSERALKAVNEGGKVLTILPPGTPPAIPFVLTSDGAVLEKLKPYLENGKVKPILDPKSPFPFSQTVEAFTYLNTNRAIGKIVIHPIP*