AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023074.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023074.01.T01 MTR_8g086070 89.759 332 3 1 1 332 1 301 0.0 593
MsG0480023074.01.T01 MTR_8g086070 86.364 242 2 1 1 242 1 211 2.44e-144 406
MsG0480023074.01.T01 MTR_5g032420 36.765 340 168 6 18 330 3 322 4.94e-60 195
MsG0480023074.01.T01 MTR_8g068890 38.750 320 182 6 18 330 3 315 4.35e-56 185
MsG0480023074.01.T01 MTR_3g100570 37.346 324 179 7 18 330 3 313 1.25e-55 184
MsG0480023074.01.T01 MTR_8g086120 59.016 122 45 2 193 314 9 125 9.76e-39 136
MsG0480023074.01.T01 MTR_7g066690 31.034 319 178 7 21 328 13 300 2.81e-35 130
MsG0480023074.01.T01 MTR_4g018750 29.874 318 192 5 14 329 11 299 1.62e-34 128
MsG0480023074.01.T01 MTR_1g090330 31.788 302 179 7 27 326 20 296 2.45e-33 125
MsG0480023074.01.T01 MTR_4g018750 28.754 313 184 8 14 322 11 288 2.93e-28 111
MsG0480023074.01.T01 MTR_8g086430 55.435 92 40 1 238 329 1 91 9.12e-28 105
MsG0480023074.01.T01 MTR_8g086420 75.000 56 14 0 238 293 1 56 1.28e-21 87.0
MsG0480023074.01.T01 MTR_1g088995 26.101 318 179 9 21 326 33 306 2.35e-20 90.1
MsG0480023074.01.T01 MTR_8g086160 54.667 75 26 2 247 320 32 99 1.28e-19 83.2
MsG0480023074.01.T01 MTR_3g462140 27.609 297 185 6 33 326 28 297 3.32e-19 86.7
MsG0480023074.01.T01 MTR_4g012850 23.891 293 175 7 14 294 3 259 4.74e-14 72.0
MsG0480023074.01.T01 MTR_8g086080 39.796 98 49 2 221 316 63 152 3.03e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023074.01.T01 AT5G19760 75.301 332 48 3 1 332 1 298 0.0 506
MsG0480023074.01.T01 AT4G24570 39.506 324 172 8 18 330 3 313 1.01e-61 199
MsG0480023074.01.T01 AT2G22500 37.578 322 179 7 18 330 3 311 1.16e-51 173
MsG0480023074.01.T01 AT5G09470 40.773 233 130 4 98 328 107 333 8.05e-45 156
MsG0480023074.01.T01 AT3G54110 33.108 296 169 7 32 325 27 295 4.30e-35 130
MsG0480023074.01.T01 AT1G14140 31.692 325 172 8 16 326 11 299 1.63e-34 128
MsG0480023074.01.T01 AT5G58970 29.114 316 186 5 18 326 13 297 2.55e-34 128
MsG0480023074.01.T01 AT5G58970 28.846 260 154 4 18 270 13 248 1.12e-25 103
MsG0480023074.01.T01 AT4G03115 27.679 336 188 11 2 326 17 308 4.21e-25 103
MsG0480023074.01.T01 AT4G03115 27.679 336 188 11 2 326 49 340 4.25e-25 103
MsG0480023074.01.T01 AT4G03115 29.075 227 146 6 102 326 24 237 1.42e-20 89.4
MsG0480023074.01.T01 AT4G03115 29.075 227 146 6 102 326 32 245 2.03e-20 89.4
MsG0480023074.01.T01 AT5G01340 25.079 315 192 8 22 326 18 298 2.16e-16 79.0

Find 108 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCCTGTTGCTGCTGGTTTC+TGG 0.111154 4:+80443930 MsG0480023074.01.T01:CDS
CCTCAACCAGCTCCAGAAAT+TGG 0.196597 4:+80448296 MsG0480023074.01.T01:CDS
TTGATATCCAATTTCCAAAA+AGG 0.198633 4:-80448410 None:intergenic
GGAGAAAAGTTATGGGTTAT+AGG 0.255079 4:+80448317 MsG0480023074.01.T01:CDS
TTCGTCAATGGTGGTGCTTC+TGG 0.275917 4:+80443968 MsG0480023074.01.T01:CDS
TTAGGTGCAAGTAGTGTATC+TGG 0.278521 4:+80447952 MsG0480023074.01.T01:intron
CAGAAATTGGAGAAAAGTTA+TGG 0.301655 4:+80448309 MsG0480023074.01.T01:CDS
TTCTTGCAGGGTCTATCAGC+TGG 0.316238 4:+80444525 MsG0480023074.01.T01:intron
AGTTGGTAGTCCAGCTGATT+TGG 0.324876 4:+80444992 MsG0480023074.01.T01:CDS
CTTTCACTGTGGAAAGGTGC+TGG 0.335848 4:+80445119 MsG0480023074.01.T01:CDS
GGGCTGACTGCTGGTGCAAT+TGG 0.358637 4:+80444963 MsG0480023074.01.T01:CDS
AAACTACACAAACGCCTTCC+AGG 0.363434 4:+80445064 MsG0480023074.01.T01:CDS
GGGTGTTGGTGCTTTCTATA+AGG 0.363669 4:+80444205 MsG0480023074.01.T01:CDS
CTGCACGCCTTGGAACATTT+AGG 0.364412 4:+80444574 MsG0480023074.01.T01:CDS
TGGCAGGGGCTTGCCATCAT+TGG 0.380343 4:-80444919 None:intergenic
GGAAGGCGTTTGTGTAGTTT+CGG 0.380503 4:-80445061 None:intergenic
CCAATTTCTGGAGCTGGTTG+AGG 0.389193 4:-80448296 None:intergenic
TTCTTCTCGTCTCCCATTGT+TGG 0.393560 4:-80443902 None:intergenic
AATTCAGGTTAGGATTCAAC+TGG 0.396885 4:+80444136 MsG0480023074.01.T01:intron
TAATTTGTTGGCTGTGTTGT+AGG 0.400868 4:+80448386 MsG0480023074.01.T01:three_prime_UTR
GAAGGGTCCTCCAGATTTGA+AGG 0.417928 4:-80448094 None:intergenic
TTGAGCATTGAATAATTTGT+TGG 0.423699 4:+80448374 MsG0480023074.01.T01:three_prime_UTR
AGAAATTGGAGAAAAGTTAT+GGG 0.426080 4:+80448310 MsG0480023074.01.T01:CDS
ACCATTGACGAAAGGCTTGA+TGG 0.428395 4:-80443957 None:intergenic
GCTGTCAAGACCTTCAAATC+TGG 0.432966 4:+80448084 MsG0480023074.01.T01:CDS
CAGTCAAGAGAGCCGGTGTA+TGG 0.437255 4:-80448060 None:intergenic
GGCCAGAAACCAGCAGCAAC+AGG 0.443267 4:-80443932 None:intergenic
CATACCTTGATCATATCAAT+AGG 0.451587 4:-80444016 None:intergenic
TGAGTCTTCACATAATCAAA+TGG 0.453835 4:-80448000 None:intergenic
TACCGTATCGGTGCAGATGA+AGG 0.455491 4:+80445092 MsG0480023074.01.T01:CDS
ACCATCAAGCCTTTCGTCAA+TGG 0.457555 4:+80443956 MsG0480023074.01.T01:CDS
CACCGATACGGTAAAGTGCC+TGG 0.473291 4:-80445082 None:intergenic
TCAAAGTGTTGAGTTCTTCA+AGG 0.476440 4:+80445196 MsG0480023074.01.T01:CDS
TTCAAGGATACCGTTGGTCT+AGG 0.476717 4:+80445212 MsG0480023074.01.T01:CDS
GTCTATCAGCTGGGTTACTC+AGG 0.478134 4:+80444535 MsG0480023074.01.T01:CDS
GATTCCCTGTCTACTGTGTC+AGG 0.479793 4:+80448130 MsG0480023074.01.T01:CDS
TTTCACTGTGGAAAGGTGCT+GGG 0.480851 4:+80445120 MsG0480023074.01.T01:CDS
TCAACCTATTGATATGATCA+AGG 0.487786 4:+80444012 MsG0480023074.01.T01:CDS
AAGCCTAAGCCTGTTGCTGC+TGG 0.491227 4:+80443923 MsG0480023074.01.T01:CDS
TTCTACCATGCTTAAGAATG+AGG 0.497892 4:+80444184 MsG0480023074.01.T01:CDS
CTTGACAAATAAAGCAATTG+AGG 0.499499 4:+80444896 MsG0480023074.01.T01:CDS
ACTTACACCACTGCACGCCT+TGG 0.499902 4:+80444564 MsG0480023074.01.T01:CDS
TTTGGCACTCATTCGTATGC+AGG 0.500271 4:+80445010 MsG0480023074.01.T01:CDS
GACACAGTAGACAGGGAATC+CGG 0.501193 4:-80448127 None:intergenic
AAGAGCCATGGCATTGAACA+TGG 0.503929 4:+80445154 MsG0480023074.01.T01:CDS
GAATCCGGTGTAAAATTTGA+AGG 0.507310 4:-80448112 None:intergenic
GCAATCCTGACACAGTAGAC+AGG 0.508794 4:-80448135 None:intergenic
TGTGTTGATAATTTCAATGT+GGG 0.509954 4:+80444319 MsG0480023074.01.T01:CDS
ATCAGCTGGGTTACTCAGGC+AGG 0.514032 4:+80444539 MsG0480023074.01.T01:CDS
GCTCTATGTGGGCTGACTGC+TGG 0.520808 4:+80444954 MsG0480023074.01.T01:CDS
CGAATGAGTGCCAAATCAGC+TGG 0.523817 4:-80445002 None:intergenic
ATTAGTCATGCAATTCAAGC+GGG 0.524365 4:+80448462 MsG0480023074.01.T01:three_prime_UTR
AAAGCAATTGAGGCCAATGA+TGG 0.524756 4:+80444906 MsG0480023074.01.T01:CDS
TTCCAGGCACTTTACCGTAT+CGG 0.534625 4:+80445080 MsG0480023074.01.T01:CDS
ACTTCGCTAATACCAACAAT+GGG 0.536551 4:+80443890 MsG0480023074.01.T01:exon
TCTTGCAGGGTCTATCAGCT+GGG 0.537823 4:+80444526 MsG0480023074.01.T01:intron
CAGGATTGCTCCCCATGTCA+TGG 0.543518 4:+80448149 MsG0480023074.01.T01:CDS
TCCCTTCATCTGCACCGATA+CGG 0.543890 4:-80445094 None:intergenic
AAGTTATGGGTTATAGGTGA+TGG 0.547875 4:+80448323 MsG0480023074.01.T01:exon
ACCGTATCGGTGCAGATGAA+GGG 0.548027 4:+80445093 MsG0480023074.01.T01:CDS
AAACCAGCAGCAACAGGCTT+AGG 0.550180 4:-80443926 None:intergenic
TTGACGAAAGGCTTGATGGT+TGG 0.552826 4:-80443953 None:intergenic
AACTTCGCTAATACCAACAA+TGG 0.553022 4:+80443889 MsG0480023074.01.T01:exon
CATCCCCATGTTCAATGCCA+TGG 0.555090 4:-80445159 None:intergenic
ACTGCTTATGGCAGATGACA+TGG 0.559975 4:+80448268 MsG0480023074.01.T01:intron
GTTAGGATTCAACTGGGTCA+AGG 0.566704 4:+80444143 MsG0480023074.01.T01:CDS
CAACTCACAGATCTAAAAGC+AGG 0.570922 4:-80444386 None:intergenic
GAGTTCTTCAAGGATACCGT+TGG 0.572249 4:+80445206 MsG0480023074.01.T01:CDS
GACAGCACAGTCAAGAGAGC+CGG 0.574269 4:-80448067 None:intergenic
TCTTCTTAACCCAACAAACA+AGG 0.579884 4:-80443695 None:intergenic
AAAGATGCAACCTGATGCTG+AGG 0.582204 4:+80448029 MsG0480023074.01.T01:CDS
TAGTTTCGGCGCTGAGCAAG+AGG 0.584237 4:-80445047 None:intergenic
TATGATATGATATGATGCGT+TGG 0.588193 4:+80448525 MsG0480023074.01.T01:three_prime_UTR
ATCAATAGGTTGAATAACAC+AGG 0.588855 4:-80444002 None:intergenic
GAAATGAAGCGAAGAAAACG+AGG 0.590384 4:-80443859 None:intergenic
GGGATTCTTTCACTGTGGAA+AGG 0.593663 4:+80445113 MsG0480023074.01.T01:CDS
AACACCCTCATTCTTAAGCA+TGG 0.601421 4:-80444189 None:intergenic
GTCAAGACCTTCAAATCTGG+AGG 0.605904 4:+80448087 MsG0480023074.01.T01:CDS
AAGAGAATAGTACCATGACA+TGG 0.606457 4:-80448161 None:intergenic
AGAGCCATGGCATTGAACAT+GGG 0.610100 4:+80445155 MsG0480023074.01.T01:CDS
AAATGTTCCAAGGCGTGCAG+TGG 0.610327 4:-80444571 None:intergenic
GAGCCATGGCATTGAACATG+GGG 0.612866 4:+80445156 MsG0480023074.01.T01:CDS
ATCAAGCCTTTCGTCAATGG+TGG 0.613468 4:+80443959 MsG0480023074.01.T01:CDS
AGAGAATAGTACCATGACAT+GGG 0.614065 4:-80448160 None:intergenic
TCTACCATGCTTAAGAATGA+GGG 0.614254 4:+80444185 MsG0480023074.01.T01:CDS
AATTAGTCATGCAATTCAAG+CGG 0.614528 4:+80448461 MsG0480023074.01.T01:three_prime_UTR
AATCCGGTGTAAAATTTGAA+GGG 0.616204 4:-80448111 None:intergenic
CAATCCTGACACAGTAGACA+GGG 0.622100 4:-80448134 None:intergenic
CAACTCACCTAAATGTTCCA+AGG 0.622902 4:-80444581 None:intergenic
TTGTGTTGATAATTTCAATG+TGG 0.627785 4:+80444318 MsG0480023074.01.T01:CDS
ATGAAGGGATTCTTTCACTG+TGG 0.628478 4:+80445108 MsG0480023074.01.T01:CDS
GGTGAAATGACTACTGTGGT+TGG 0.629754 4:+80445233 MsG0480023074.01.T01:CDS
GATACGGTAAAGTGCCTGGA+AGG 0.630447 4:-80445078 None:intergenic
GCCATGGCTCTTACTACAGT+AGG 0.638558 4:-80445143 None:intergenic
GAAGTGAAGAACGAATCTAG+TGG 0.641926 4:-80443793 None:intergenic
GCCTACTGTAGTAAGAGCCA+TGG 0.642788 4:+80445142 MsG0480023074.01.T01:CDS
ATGTGTCGAAAAGATGTCTG+AGG 0.652732 4:-80448630 None:intergenic
GGTGCAATTGGAGCAACAGT+TGG 0.654003 4:+80444975 MsG0480023074.01.T01:CDS
GAAGCACCACCATTGACGAA+AGG 0.656464 4:-80443965 None:intergenic
ATTCAGGTTAGGATTCAACT+GGG 0.656898 4:+80444137 MsG0480023074.01.T01:intron
GAGGGAAAATATCCATACAC+CGG 0.660454 4:+80448048 MsG0480023074.01.T01:CDS
AGTCATTTCACCTAGACCAA+CGG 0.665426 4:-80445222 None:intergenic
TTAGTCATGCAATTCAAGCG+GGG 0.668074 4:+80448463 MsG0480023074.01.T01:three_prime_UTR
ATGCTTAAGAATGAGGGTGT+TGG 0.674370 4:+80444191 MsG0480023074.01.T01:CDS
AAATGAAGCGAAGAAAACGA+GGG 0.676255 4:-80443858 None:intergenic
GAGAATAGTACCATGACATG+GGG 0.680357 4:-80448159 None:intergenic
AAGATGCAACCTGATGCTGA+GGG 0.680874 4:+80448030 MsG0480023074.01.T01:CDS
TCTAGGTGAAATGACTACTG+TGG 0.723327 4:+80445229 MsG0480023074.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTCATTTTTTTTAAC+TGG + Chr4:80447093-80447112 MsG0480023074.01.T01:intron 10.0%
!!! CTAATTTATTCTTTTATAAA+AGG - Chr4:80445589-80445608 None:intergenic 10.0%
!!! TAAATTCATTTTTTTTAACT+GGG + Chr4:80447094-80447113 MsG0480023074.01.T01:intron 10.0%
!!! TTTTTTTATATTGTTTACTT+TGG + Chr4:80444416-80444435 MsG0480023074.01.T01:intron 10.0%
!! CAAAAAAAAACAAAAAAGAT+AGG - Chr4:80447286-80447305 None:intergenic 15.0%
!! TTCTGTTATCTATTAAAAAA+AGG - Chr4:80446077-80446096 None:intergenic 15.0%
!!! AATTAGTCAAACTTTTTATT+AGG + Chr4:80445603-80445622 MsG0480023074.01.T01:intron 15.0%
!!! TTAATTTCAATTTTGTAACT+TGG + Chr4:80446690-80446709 MsG0480023074.01.T01:intron 15.0%
!!! TTTTTGCAGTATAATAAAAA+GGG - Chr4:80447895-80447914 None:intergenic 15.0%
!!! TTTTTTGCAGTATAATAAAA+AGG - Chr4:80447896-80447915 None:intergenic 15.0%
!! AAACTAACAACAGTATATTA+TGG + Chr4:80445834-80445853 MsG0480023074.01.T01:intron 20.0%
!! AAATCTAATATTGGATGATA+AGG + Chr4:80446004-80446023 MsG0480023074.01.T01:intron 20.0%
!! AACATTTCCCTTTATAAAAA+GGG - Chr4:80445393-80445412 None:intergenic 20.0%
!! AACTAACAACAGTATATTAT+GGG + Chr4:80445835-80445854 MsG0480023074.01.T01:intron 20.0%
!! AATCTAATATTGGATGATAA+GGG + Chr4:80446005-80446024 MsG0480023074.01.T01:intron 20.0%
!! ATTGCAATATTCATCAAAAT+TGG + Chr4:80444616-80444635 MsG0480023074.01.T01:intron 20.0%
!! ATTTATTGAGTCATTGTATT+TGG + Chr4:80444446-80444465 MsG0480023074.01.T01:intron 20.0%
!! ATTTGATATGATGAATAAAG+GGG - Chr4:80446161-80446180 None:intergenic 20.0%
!! CATTTGATATGATGAATAAA+GGG - Chr4:80446162-80446181 None:intergenic 20.0%
!! GTGAAATTATAGTTTGATTA+AGG - Chr4:80447493-80447512 None:intergenic 20.0%
!! TAAAAACACAATGTAATTGT+AGG - Chr4:80444722-80444741 None:intergenic 20.0%
!! TAAAGGTAGAAAAAAAATCT+TGG + Chr4:80445446-80445465 MsG0480023074.01.T01:intron 20.0%
!! TAACATTTCCCTTTATAAAA+AGG - Chr4:80445394-80445413 None:intergenic 20.0%
!! TATTGTATTTACTAGCTAAT+TGG + Chr4:80446215-80446234 MsG0480023074.01.T01:intron 20.0%
!!! AAGGTTTTGAAATCTAATAT+TGG + Chr4:80445995-80446014 MsG0480023074.01.T01:intron 20.0%
!!! ATAAAACATATCCTTTTGAA+TGG - Chr4:80444767-80444786 None:intergenic 20.0%
!!! ATCTAAGTGTAATTTGTTAA+GGG - Chr4:80447145-80447164 None:intergenic 20.0%
!!! ATTACCAATTTTCTTCTAAT+CGG + Chr4:80447822-80447841 MsG0480023074.01.T01:intron 20.0%
!!! ATTGATTTTTTTATTGCCTT+TGG + Chr4:80448187-80448206 MsG0480023074.01.T01:intron 20.0%
!!! TATTTCAGTTTTTTACAATC+AGG - Chr4:80446364-80446383 None:intergenic 20.0%
!!! TCTTTCATTTTTTGATGATT+TGG + Chr4:80444057-80444076 MsG0480023074.01.T01:intron 20.0%
!!! TGTTTTTTTGTTTTGAATTC+AGG + Chr4:80444121-80444140 MsG0480023074.01.T01:intron 20.0%
!!! TTTTTGATGATTTGGTATTT+GGG + Chr4:80444065-80444084 MsG0480023074.01.T01:intron 20.0%
!!! TTTTTTGATGATTTGGTATT+TGG + Chr4:80444064-80444083 MsG0480023074.01.T01:intron 20.0%
! AAATAGATACTATCTTGAGT+AGG + Chr4:80446493-80446512 MsG0480023074.01.T01:intron 25.0%
! AACAACCTAATAAACATTGA+TGG + Chr4:80447353-80447372 MsG0480023074.01.T01:intron 25.0%
! AAGATAATTGAAACAACATC+TGG - Chr4:80444252-80444271 None:intergenic 25.0%
! AATAGATACTATCTTGAGTA+GGG + Chr4:80446494-80446513 MsG0480023074.01.T01:intron 25.0%
! ACATTTCCCTTTATAAAAAG+GGG - Chr4:80445392-80445411 None:intergenic 25.0%
! ACTAACAACAGTATATTATG+GGG + Chr4:80445836-80445855 MsG0480023074.01.T01:intron 25.0%
! AGAAATCAGTCTTAATTTCA+TGG + Chr4:80446582-80446601 MsG0480023074.01.T01:intron 25.0%
! AGAAATTGGAGAAAAGTTAT+GGG + Chr4:80448310-80448329 MsG0480023074.01.T01:CDS 25.0%
! AGACTCAATTTATACAAGAT+TGG - Chr4:80446655-80446674 None:intergenic 25.0%
! AGTGGCAATAAAAAATCTTA+AGG + Chr4:80445976-80445995 MsG0480023074.01.T01:intron 25.0%
! ATATTCATCAAAATTGGATC+TGG + Chr4:80444622-80444641 MsG0480023074.01.T01:intron 25.0%
! ATGAGTCAACAATATCAAAA+TGG - Chr4:80445266-80445285 None:intergenic 25.0%
! ATGATAGAAACAAAAACATG+TGG - Chr4:80447628-80447647 None:intergenic 25.0%
! ATTAATGTACACAATCCAAA+TGG - Chr4:80447860-80447879 None:intergenic 25.0%
! ATTGTACCATAATCACAAAT+TGG - Chr4:80447709-80447728 None:intergenic 25.0%
! ATTTCATCTTAGTTCATGTT+TGG + Chr4:80446383-80446402 MsG0480023074.01.T01:intron 25.0%
! ATTTGTGATTATGGTACAAT+CGG + Chr4:80447709-80447728 MsG0480023074.01.T01:intron 25.0%
! CCATTTGATATGATGAATAA+AGG - Chr4:80446163-80446182 None:intergenic 25.0%
! CCTTTATTCATCATATCAAA+TGG + Chr4:80446160-80446179 MsG0480023074.01.T01:intron 25.0%
! GAGCTTAAATTAATCCAAAT+TGG - Chr4:80446609-80446628 None:intergenic 25.0%
! TATTGTCAAACTTGACATTA+GGG - Chr4:80446938-80446957 None:intergenic 25.0%
! TCAAGTTTATATACTGCTTA+TGG + Chr4:80448256-80448275 MsG0480023074.01.T01:intron 25.0%
! TGAAGAGGTTGTTTATTTAT+TGG + Chr4:80447258-80447277 MsG0480023074.01.T01:intron 25.0%
! TGATATCCAATTTCCAAAAA+GGG - Chr4:80448412-80448431 None:intergenic 25.0%
! TGTGTGAACAATTCTTAAAA+CGG - Chr4:80447318-80447337 None:intergenic 25.0%
! TTAATTTCTACTTTGCTGAA+GGG + Chr4:80445949-80445968 MsG0480023074.01.T01:intron 25.0%
! TTCTCAAATGATGAAAAGAT+AGG - Chr4:80445797-80445816 None:intergenic 25.0%
! TTGATATCCAATTTCCAAAA+AGG - Chr4:80448413-80448432 None:intergenic 25.0%
!! AATGTATGTAAGTTCAAGTT+TGG + Chr4:80446836-80446855 MsG0480023074.01.T01:intron 25.0%
!! AGAAAATTGGTAATCAGAAA+AGG - Chr4:80447816-80447835 None:intergenic 25.0%
!! ATACTGTTGTTAGTTTCAAA+AGG - Chr4:80445830-80445849 None:intergenic 25.0%
!! CTTTTTCTGTGTCTTTTAAA+AGG - Chr4:80447412-80447431 None:intergenic 25.0%
!! GTTTAAAATTAAGTGAGCTA+GGG - Chr4:80447379-80447398 None:intergenic 25.0%
!! TTTAATTTCTACTTTGCTGA+AGG + Chr4:80445948-80445967 MsG0480023074.01.T01:intron 25.0%
!!! ATATCCTTTTGAATGGATTA+AGG - Chr4:80444760-80444779 None:intergenic 25.0%
!!! GAATACTTTTGAAACATCAA+TGG - Chr4:80445363-80445382 None:intergenic 25.0%
!!! GATCTAAGTGTAATTTGTTA+AGG - Chr4:80447146-80447165 None:intergenic 25.0%
!!! GTATAAATCCCATTTTTGAA+TGG + Chr4:80448562-80448581 MsG0480023074.01.T01:three_prime_UTR 25.0%
!!! GTTATGGAATGCATTTTTTA+TGG + Chr4:80444828-80444847 MsG0480023074.01.T01:intron 25.0%
!!! TATCCTTTTGAATGGATTAA+GGG - Chr4:80444759-80444778 None:intergenic 25.0%
!!! TGCATTTTTTATGGTGTTAA+CGG + Chr4:80444837-80444856 MsG0480023074.01.T01:intron 25.0%
!!! TGTGTTGATAATTTCAATGT+GGG + Chr4:80444319-80444338 MsG0480023074.01.T01:CDS 25.0%
!!! TTGAGCATTGAATAATTTGT+TGG + Chr4:80448374-80448393 MsG0480023074.01.T01:three_prime_UTR 25.0%
!!! TTGTGTTGATAATTTCAATG+TGG + Chr4:80444318-80444337 MsG0480023074.01.T01:CDS 25.0%
!!! TTTTGGAAATTGGATATCAA+TGG + Chr4:80448413-80448432 MsG0480023074.01.T01:three_prime_UTR 25.0%
!!! TTTTGTTTTGAATTCAGGTT+AGG + Chr4:80444126-80444145 MsG0480023074.01.T01:intron 25.0%
AAACTCCACAAAAATGAAAC+AGG - Chr4:80445736-80445755 None:intergenic 30.0%
AAATGTTAACTTATGCCCTT+GGG + Chr4:80445406-80445425 MsG0480023074.01.T01:intron 30.0%
AACACAATGTAATTGTAGGA+TGG - Chr4:80444718-80444737 None:intergenic 30.0%
AACTAAATATGCCATCTCTT+GGG - Chr4:80447593-80447612 None:intergenic 30.0%
AACTCCACAAAAATGAAACA+GGG - Chr4:80445735-80445754 None:intergenic 30.0%
AATCCGGTGTAAAATTTGAA+GGG - Chr4:80448114-80448133 None:intergenic 30.0%
AATTAGTCATGCAATTCAAG+CGG + Chr4:80448461-80448480 MsG0480023074.01.T01:three_prime_UTR 30.0%
ACAACATCTGGAAAAAAAGA+AGG - Chr4:80444240-80444259 None:intergenic 30.0%
ACAAGTTAAGGAGCTTAAAA+TGG - Chr4:80445540-80445559 None:intergenic 30.0%
ACAAGTTCTCCATTCAAAAA+TGG - Chr4:80448574-80448593 None:intergenic 30.0%
ACACAATGTAATTGTAGGAT+GGG - Chr4:80444717-80444736 None:intergenic 30.0%
ACTTGAGTTTGAATTGAACT+AGG - Chr4:80446549-80446568 None:intergenic 30.0%
ATACAACTATAGCACAAGAA+AGG - Chr4:80446321-80446340 None:intergenic 30.0%
ATCTCCGATTAGAAGAAAAT+TGG - Chr4:80447829-80447848 None:intergenic 30.0%
CAAGTTCTCCATTCAAAAAT+GGG - Chr4:80448573-80448592 None:intergenic 30.0%
CAGAAATTGGAGAAAAGTTA+TGG + Chr4:80448309-80448328 MsG0480023074.01.T01:CDS 30.0%
CATACCTTGATCATATCAAT+AGG - Chr4:80444019-80444038 None:intergenic 30.0%
CTTAATTTCATGGTCCAATT+TGG + Chr4:80446592-80446611 MsG0480023074.01.T01:intron 30.0%
CTTGACAAATAAAGCAATTG+AGG + Chr4:80444896-80444915 MsG0480023074.01.T01:CDS 30.0%
GCATAAGTTAAAAAGGCTAA+AGG + Chr4:80445429-80445448 MsG0480023074.01.T01:intron 30.0%
GTATTGTCAAACTTGACATT+AGG - Chr4:80446939-80446958 None:intergenic 30.0%
GTATTTACTAGCTAATTGGT+GGG + Chr4:80446219-80446238 MsG0480023074.01.T01:intron 30.0%
TAACTAAATATGCCATCTCT+TGG - Chr4:80447594-80447613 None:intergenic 30.0%
TAGCTAGAAAAACATACCAA+AGG - Chr4:80448206-80448225 None:intergenic 30.0%
TATGATATGATATGATGCGT+TGG + Chr4:80448525-80448544 MsG0480023074.01.T01:three_prime_UTR 30.0%
TCAACCTATTGATATGATCA+AGG + Chr4:80444012-80444031 MsG0480023074.01.T01:CDS 30.0%
TGAGTCTTCACATAATCAAA+TGG - Chr4:80448003-80448022 None:intergenic 30.0%
TGCATTCCAATTTGTGATTA+TGG + Chr4:80447700-80447719 MsG0480023074.01.T01:intron 30.0%
TGTATTTACTAGCTAATTGG+TGG + Chr4:80446218-80446237 MsG0480023074.01.T01:intron 30.0%
TTAACGGTTGTCTTACTTAT+TGG + Chr4:80444853-80444872 MsG0480023074.01.T01:intron 30.0%
TTCTAGTCTAAGTCATGTAA+GGG + Chr4:80447784-80447803 MsG0480023074.01.T01:intron 30.0%
! ATCAAAATTGGATCTGGAAT+TGG + Chr4:80444628-80444647 MsG0480023074.01.T01:intron 30.0%
! ATCAATAGGTTGAATAACAC+AGG - Chr4:80444005-80444024 None:intergenic 30.0%
! CACAAACCCCTTTTTATAAA+GGG + Chr4:80445383-80445402 MsG0480023074.01.T01:intron 30.0%
! CATAACTTTTCTCCAATTTC+TGG - Chr4:80448311-80448330 None:intergenic 30.0%
! GGTTTAAAATTAAGTGAGCT+AGG - Chr4:80447380-80447399 None:intergenic 30.0%
! TTGACACTTGCTAAAAGATT+TGG - Chr4:80445306-80445325 None:intergenic 30.0%
! TTTCTAGTCTAAGTCATGTA+AGG + Chr4:80447783-80447802 MsG0480023074.01.T01:intron 30.0%
! TTTGATTGCTTTGTTCTTAG+TGG + Chr4:80444288-80444307 MsG0480023074.01.T01:intron 30.0%
! TTTTATCTACTGTGGTGTAA+AGG - Chr4:80446127-80446146 None:intergenic 30.0%
!! CGATTGCTACAATTTAGTTT+TGG + Chr4:80447200-80447219 MsG0480023074.01.T01:intron 30.0%
!! GAGTTTTATAAGCTCTTGTT+TGG - Chr4:80443771-80443790 None:intergenic 30.0%
!! GCTCTGAAAGAAATTACAAA+AGG - Chr4:80444658-80444677 None:intergenic 30.0%
!! GTTCTTTGAAATAGTGAATC+TGG + Chr4:80447514-80447533 MsG0480023074.01.T01:intron 30.0%
!! TGAGTCATTGTATTTGGTTT+TGG + Chr4:80444452-80444471 MsG0480023074.01.T01:intron 30.0%
!! TTTTAGATCTGTGAGTTGAA+GGG + Chr4:80444391-80444410 MsG0480023074.01.T01:intron 30.0%
!!! ATACGAGTCTAGTTTTGAAA+AGG - Chr4:80446264-80446283 None:intergenic 30.0%
!!! TACGAGTCTAGTTTTGAAAA+GGG - Chr4:80446263-80446282 None:intergenic 30.0%
AAACAAAAACATGTGGCAAC+AGG - Chr4:80447621-80447640 None:intergenic 35.0%
AAACAGCAAAGAAACAGAAC+AGG - Chr4:80445698-80445717 None:intergenic 35.0%
AAATGAAGCGAAGAAAACGA+GGG - Chr4:80443861-80443880 None:intergenic 35.0%
AACTTCGCTAATACCAACAA+TGG + Chr4:80443889-80443908 MsG0480023074.01.T01:exon 35.0%
AAGAGAATAGTACCATGACA+TGG - Chr4:80448164-80448183 None:intergenic 35.0%
AATGTTAACTTATGCCCTTG+GGG + Chr4:80445407-80445426 MsG0480023074.01.T01:intron 35.0%
AATTGTAGCAATCGCACTAT+AGG - Chr4:80447194-80447213 None:intergenic 35.0%
ACGAAGATGAAGGTTATATC+TGG + Chr4:80446982-80447001 MsG0480023074.01.T01:intron 35.0%
ACTAGACTCGTATAGATCAA+AGG + Chr4:80446271-80446290 MsG0480023074.01.T01:intron 35.0%
ACTGTGGTGTAAAGGAAATA+GGG - Chr4:80446119-80446138 None:intergenic 35.0%
ACTTCGCTAATACCAACAAT+GGG + Chr4:80443890-80443909 MsG0480023074.01.T01:exon 35.0%
AGAAGAGATTCAGTAGCAAA+TGG - Chr4:80447932-80447951 None:intergenic 35.0%
AGAGAATAGTACCATGACAT+GGG - Chr4:80448163-80448182 None:intergenic 35.0%
AGTTCAAGACACATATTGCA+AGG - Chr4:80447654-80447673 None:intergenic 35.0%
AGTTTGAATTGAACTAGGTC+TGG - Chr4:80446544-80446563 None:intergenic 35.0%
ATGAATAAAGGGGAAACTAG+GGG - Chr4:80446151-80446170 None:intergenic 35.0%
ATGCAAAGGACTAATGACAA+AGG - Chr4:80444806-80444825 None:intergenic 35.0%
ATTAGTCATGCAATTCAAGC+GGG + Chr4:80448462-80448481 MsG0480023074.01.T01:three_prime_UTR 35.0%
CAACTTACAGCAACAAAACA+AGG - Chr4:80447440-80447459 None:intergenic 35.0%
CCTTTATAAAAAGGGGTTTG+TGG - Chr4:80445385-80445404 None:intergenic 35.0%
CGGAGATATGATATTCCATT+TGG + Chr4:80447842-80447861 MsG0480023074.01.T01:intron 35.0%
CTAAATCCATACCTCAACAA+AGG - Chr4:80444485-80444504 None:intergenic 35.0%
CTCATTGAGTTTCAAAAGTC+GGG - Chr4:80446632-80446651 None:intergenic 35.0%
GAAATGTTAACTTATGCCCT+TGG + Chr4:80445405-80445424 MsG0480023074.01.T01:intron 35.0%
GAACATAGTACCATTGACAT+TGG - Chr4:80447552-80447571 None:intergenic 35.0%
GAATCCGGTGTAAAATTTGA+AGG - Chr4:80448115-80448134 None:intergenic 35.0%
GATGAATAAAGGGGAAACTA+GGG - Chr4:80446152-80446171 None:intergenic 35.0%
GCTCATTGAGTTTCAAAAGT+CGG - Chr4:80446633-80446652 None:intergenic 35.0%
GTTCAAGACACATATTGCAA+GGG - Chr4:80447653-80447672 None:intergenic 35.0%
TAAGAGATACACGAAGATGA+AGG + Chr4:80446972-80446991 MsG0480023074.01.T01:intron 35.0%
TACTGTGGTGTAAAGGAAAT+AGG - Chr4:80446120-80446139 None:intergenic 35.0%
TAGGGCCATCAATGTTTATT+AGG - Chr4:80447361-80447380 None:intergenic 35.0%
TCATTGAGTTTCAAAAGTCG+GGG - Chr4:80446631-80446650 None:intergenic 35.0%
TCTACCAAAAAGCTCTATGT+GGG + Chr4:80444943-80444962 MsG0480023074.01.T01:CDS 35.0%
TCTACCATGCTTAAGAATGA+GGG + Chr4:80444185-80444204 MsG0480023074.01.T01:CDS 35.0%
TCTTCTTAACCCAACAAACA+AGG - Chr4:80443698-80443717 None:intergenic 35.0%
TGATGAATAAAGGGGAAACT+AGG - Chr4:80446153-80446172 None:intergenic 35.0%
TGCTACTGAATCTCTTCTTT+AGG + Chr4:80447934-80447953 MsG0480023074.01.T01:intron 35.0%
TTCACACATCAAAAGTGAAC+TGG + Chr4:80447330-80447349 MsG0480023074.01.T01:intron 35.0%
TTCTACCATGCTTAAGAATG+AGG + Chr4:80444184-80444203 MsG0480023074.01.T01:CDS 35.0%
TTGTCATTAGTCCTTTGCAT+TGG + Chr4:80444806-80444825 MsG0480023074.01.T01:intron 35.0%
TTGTTGAGGTATGGATTTAG+TGG + Chr4:80444485-80444504 MsG0480023074.01.T01:intron 35.0%
! AAGTTATGGGTTATAGGTGA+TGG + Chr4:80448323-80448342 MsG0480023074.01.T01:exon 35.0%
! AATTCAGGTTAGGATTCAAC+TGG + Chr4:80444136-80444155 MsG0480023074.01.T01:intron 35.0%
! ATTCAGGTTAGGATTCAACT+GGG + Chr4:80444137-80444156 MsG0480023074.01.T01:intron 35.0%
! ATTGAGTCTTTTATGCTCAG+TGG + Chr4:80446666-80446685 MsG0480023074.01.T01:intron 35.0%
! CCACAAACCCCTTTTTATAA+AGG + Chr4:80445382-80445401 MsG0480023074.01.T01:intron 35.0%
! GGAGAAAAGTTATGGGTTAT+AGG + Chr4:80448317-80448336 MsG0480023074.01.T01:CDS 35.0%
! TTGAGTCTTTTATGCTCAGT+GGG + Chr4:80446667-80446686 MsG0480023074.01.T01:intron 35.0%
! TTTAGATCTGTGAGTTGAAG+GGG + Chr4:80444392-80444411 MsG0480023074.01.T01:intron 35.0%
!! AATGCCCTGTTTCATTTTTG+TGG + Chr4:80445728-80445747 MsG0480023074.01.T01:intron 35.0%
!! AGTGAATCTGGTTCTTTATC+TGG + Chr4:80447526-80447545 MsG0480023074.01.T01:intron 35.0%
!! CTTTTAGATCTGTGAGTTGA+AGG + Chr4:80444390-80444409 MsG0480023074.01.T01:intron 35.0%
!! GCATTTCTTTCTAGTTGGAT+AGG + Chr4:80447116-80447135 MsG0480023074.01.T01:intron 35.0%
!! GTTCTGTTTCTTTGCTGTTT+AGG + Chr4:80445698-80445717 MsG0480023074.01.T01:intron 35.0%
!! TAATTTGTTGGCTGTGTTGT+AGG + Chr4:80448386-80448405 MsG0480023074.01.T01:three_prime_UTR 35.0%
!! TCAAAGTGTTGAGTTCTTCA+AGG + Chr4:80445196-80445215 MsG0480023074.01.T01:CDS 35.0%
!! TTAGTCCTTTGCATTGGTTA+TGG + Chr4:80444812-80444831 MsG0480023074.01.T01:intron 35.0%
!!! AAGCTCTTGTTTGGTTTTTG+TGG - Chr4:80443762-80443781 None:intergenic 35.0%
!!! ACGAGTCTAGTTTTGAAAAG+GGG - Chr4:80446262-80446281 None:intergenic 35.0%
!!! CTTGTTTTGTTGCTGTAAGT+TGG + Chr4:80447438-80447457 MsG0480023074.01.T01:intron 35.0%
!!! CTTTTTAACTTATGCCCCAA+GGG - Chr4:80445424-80445443 None:intergenic 35.0%
AAAGCAATTGAGGCCAATGA+TGG + Chr4:80444906-80444925 MsG0480023074.01.T01:CDS 40.0%
AACACCCTCATTCTTAAGCA+TGG - Chr4:80444192-80444211 None:intergenic 40.0%
AAGCTGAATCACTTCTTGCA+GGG + Chr4:80444513-80444532 MsG0480023074.01.T01:intron 40.0%
AGTCATTTCACCTAGACCAA+CGG - Chr4:80445225-80445244 None:intergenic 40.0%
ATGAAGGGATTCTTTCACTG+TGG + Chr4:80445108-80445127 MsG0480023074.01.T01:CDS 40.0%
ATGTGTCGAAAAGATGTCTG+AGG - Chr4:80448633-80448652 None:intergenic 40.0%
CAACTCACAGATCTAAAAGC+AGG - Chr4:80444389-80444408 None:intergenic 40.0%
CAACTCACCTAAATGTTCCA+AGG - Chr4:80444584-80444603 None:intergenic 40.0%
CAGCCCTTAATCCATTCAAA+AGG + Chr4:80444753-80444772 MsG0480023074.01.T01:intron 40.0%
CCTTGGGGCATAAGTTAAAA+AGG + Chr4:80445422-80445441 MsG0480023074.01.T01:intron 40.0%
CTCTACCAAAAAGCTCTATG+TGG + Chr4:80444942-80444961 MsG0480023074.01.T01:CDS 40.0%
CTTCATCCTTTGTTGAGGTA+TGG + Chr4:80444476-80444495 MsG0480023074.01.T01:intron 40.0%
CTTTATCTGGCCAATGTCAA+TGG + Chr4:80447539-80447558 MsG0480023074.01.T01:intron 40.0%
GAAATGAAGCGAAGAAAACG+AGG - Chr4:80443862-80443881 None:intergenic 40.0%
GAAGTGAAGAACGAATCTAG+TGG - Chr4:80443796-80443815 None:intergenic 40.0%
GAGAATAGTACCATGACATG+GGG - Chr4:80448162-80448181 None:intergenic 40.0%
GAGGGAAAATATCCATACAC+CGG + Chr4:80448048-80448067 MsG0480023074.01.T01:CDS 40.0%
GATACTATCTTGAGTAGGGT+TGG + Chr4:80446498-80446517 MsG0480023074.01.T01:intron 40.0%
GCATTCCATAACCAATGCAA+AGG - Chr4:80444820-80444839 None:intergenic 40.0%
TAACTCAGTGAACTGTGAAG+AGG + Chr4:80447243-80447262 MsG0480023074.01.T01:intron 40.0%
TAAGCTGAATCACTTCTTGC+AGG + Chr4:80444512-80444531 MsG0480023074.01.T01:intron 40.0%
TAGGGAGGAAGATTAGATGA+TGG - Chr4:80446101-80446120 None:intergenic 40.0%
TATGGTACAATCGGTAGTCT+TGG + Chr4:80447718-80447737 MsG0480023074.01.T01:intron 40.0%
TCTAGGTGAAATGACTACTG+TGG + Chr4:80445229-80445248 MsG0480023074.01.T01:CDS 40.0%
TGTCAAACTTGACATTAGGG+CGG - Chr4:80446935-80446954 None:intergenic 40.0%
TTAGGTGCAAGTAGTGTATC+TGG + Chr4:80447952-80447971 MsG0480023074.01.T01:intron 40.0%
TTAGTCATGCAATTCAAGCG+GGG + Chr4:80448463-80448482 MsG0480023074.01.T01:three_prime_UTR 40.0%
TTGGACTTCATCCTTTGTTG+AGG + Chr4:80444471-80444490 MsG0480023074.01.T01:intron 40.0%
! ACTGGGCATTTCTTTCTAGT+TGG + Chr4:80447111-80447130 MsG0480023074.01.T01:intron 40.0%
! ATGCTTAAGAATGAGGGTGT+TGG + Chr4:80444191-80444210 MsG0480023074.01.T01:CDS 40.0%
! CTAGGGGATTTTATCTACTG+TGG - Chr4:80446135-80446154 None:intergenic 40.0%
! CTTTCTGTACTGAGTTGAGT+AGG + Chr4:80446884-80446903 MsG0480023074.01.T01:intron 40.0%
! GGACCCTTCAAATTTTACAC+CGG + Chr4:80448108-80448127 MsG0480023074.01.T01:CDS 40.0%
!! AGAAGCATCACTGTTATTCG+AGG + Chr4:80446791-80446810 MsG0480023074.01.T01:intron 40.0%
!! CATAGAGCTTTTTGGTAGAG+TGG - Chr4:80444942-80444961 None:intergenic 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - Chr4:80445564-80445583 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - Chr4:80445565-80445584 None:intergenic 40.0%
!! TCTTTTAAAAGGCTGACGCA+TGG - Chr4:80447401-80447420 None:intergenic 40.0%
!! TGTAGGCCCTTTTTGGAAAT+TGG + Chr4:80448403-80448422 MsG0480023074.01.T01:three_prime_UTR 40.0%
!!! CCTTTTTAACTTATGCCCCA+AGG - Chr4:80445425-80445444 None:intergenic 40.0%
!!! TTTTCTCCAATTTCTGGAGC+TGG - Chr4:80448305-80448324 None:intergenic 40.0%
AAACTACACAAACGCCTTCC+AGG + Chr4:80445064-80445083 MsG0480023074.01.T01:CDS 45.0%
AAAGATGCAACCTGATGCTG+AGG + Chr4:80448029-80448048 MsG0480023074.01.T01:CDS 45.0%
AAGATGCAACCTGATGCTGA+GGG + Chr4:80448030-80448049 MsG0480023074.01.T01:CDS 45.0%
ACCATCAAGCCTTTCGTCAA+TGG + Chr4:80443956-80443975 MsG0480023074.01.T01:CDS 45.0%
ACCATTGACGAAAGGCTTGA+TGG - Chr4:80443960-80443979 None:intergenic 45.0%
ACTGCTTATGGCAGATGACA+TGG + Chr4:80448268-80448287 MsG0480023074.01.T01:intron 45.0%
ACTTTGCTGAAGGGATTGAG+TGG + Chr4:80445958-80445977 MsG0480023074.01.T01:intron 45.0%
AGCATCACTGTTATTCGAGG+CGG + Chr4:80446794-80446813 MsG0480023074.01.T01:intron 45.0%
ATCAAGCCTTTCGTCAATGG+TGG + Chr4:80443959-80443978 MsG0480023074.01.T01:CDS 45.0%
CAATCCTGACACAGTAGACA+GGG - Chr4:80448137-80448156 None:intergenic 45.0%
CTTTATGCACACCCAAGAGA+TGG + Chr4:80447579-80447598 MsG0480023074.01.T01:intron 45.0%
GAATTGAACTAGGTCTGGCT+TGG - Chr4:80446539-80446558 None:intergenic 45.0%
GAGTTCTTCAAGGATACCGT+TGG + Chr4:80445206-80445225 MsG0480023074.01.T01:CDS 45.0%
GCTGTCAAGACCTTCAAATC+TGG + Chr4:80448084-80448103 MsG0480023074.01.T01:CDS 45.0%
GGGATTCTTTCACTGTGGAA+AGG + Chr4:80445113-80445132 MsG0480023074.01.T01:CDS 45.0%
GGTGAAATGACTACTGTGGT+TGG + Chr4:80445233-80445252 MsG0480023074.01.T01:CDS 45.0%
GTCAAGACCTTCAAATCTGG+AGG + Chr4:80448087-80448106 MsG0480023074.01.T01:CDS 45.0%
GTGGTGTAAAGGAAATAGGG+AGG - Chr4:80446116-80446135 None:intergenic 45.0%
GTTAGGATTCAACTGGGTCA+AGG + Chr4:80444143-80444162 MsG0480023074.01.T01:CDS 45.0%
TTCCAGGCACTTTACCGTAT+CGG + Chr4:80445080-80445099 MsG0480023074.01.T01:CDS 45.0%
TTCTTCTCGTCTCCCATTGT+TGG - Chr4:80443905-80443924 None:intergenic 45.0%
TTTGGCACTCATTCGTATGC+AGG + Chr4:80445010-80445029 MsG0480023074.01.T01:CDS 45.0%
! AAGAGCCATGGCATTGAACA+TGG + Chr4:80445154-80445173 MsG0480023074.01.T01:CDS 45.0%
! AGAGCCATGGCATTGAACAT+GGG + Chr4:80445155-80445174 MsG0480023074.01.T01:CDS 45.0%
! GGATATTTTCCCTCAGCATC+AGG - Chr4:80448042-80448061 None:intergenic 45.0%
! TCAGCCCACATAGAGCTTTT+TGG - Chr4:80444950-80444969 None:intergenic 45.0%
! TTCAAGGATACCGTTGGTCT+AGG + Chr4:80445212-80445231 MsG0480023074.01.T01:CDS 45.0%
! TTGACGAAAGGCTTGATGGT+TGG - Chr4:80443956-80443975 None:intergenic 45.0%
!! AGCTTTTTGGTAGAGTGGCA+GGG - Chr4:80444937-80444956 None:intergenic 45.0%
!! AGTTGGTAGTCCAGCTGATT+TGG + Chr4:80444992-80445011 MsG0480023074.01.T01:CDS 45.0%
!! CTCCTTAACTTGTGCCCTAA+GGG + Chr4:80445547-80445566 MsG0480023074.01.T01:intron 45.0%
!! GGAAGGCGTTTGTGTAGTTT+CGG - Chr4:80445064-80445083 None:intergenic 45.0%
!! GGGTGTTGGTGCTTTCTATA+AGG + Chr4:80444205-80444224 MsG0480023074.01.T01:CDS 45.0%
!! TCACTCTCTAGCTAGCTTTC+TGG + Chr4:80446187-80446206 MsG0480023074.01.T01:intron 45.0%
!! TTTCACTGTGGAAAGGTGCT+GGG + Chr4:80445120-80445139 MsG0480023074.01.T01:CDS 45.0%
!!! TAATTTATTCTTTTATAAAA+GGG - Chr4:80445588-80445607 None:intergenic 5.0%
!!! TTTTATGTATTTTTTAATTT+GGG + Chr4:80448711-80448730 MsG0480023074.01.T01:three_prime_UTR 5.0%
!!! TTTTTATGTATTTTTTAATT+TGG + Chr4:80448710-80448729 MsG0480023074.01.T01:three_prime_UTR 5.0%
AAACCAGCAGCAACAGGCTT+AGG - Chr4:80443929-80443948 None:intergenic 50.0%
AAATGTTCCAAGGCGTGCAG+TGG - Chr4:80444574-80444593 None:intergenic 50.0%
AGTTGAGTAGGCACAGGAGT+TGG + Chr4:80446896-80446915 MsG0480023074.01.T01:intron 50.0%
CATCCCCATGTTCAATGCCA+TGG - Chr4:80445162-80445181 None:intergenic 50.0%
CCTCAACCAGCTCCAGAAAT+TGG + Chr4:80448296-80448315 MsG0480023074.01.T01:CDS 50.0%
CGAATGAGTGCCAAATCAGC+TGG - Chr4:80445005-80445024 None:intergenic 50.0%
CTGCACGCCTTGGAACATTT+AGG + Chr4:80444574-80444593 MsG0480023074.01.T01:CDS 50.0%
GAAGGGTCCTCCAGATTTGA+AGG - Chr4:80448097-80448116 None:intergenic 50.0%
GACACAGTAGACAGGGAATC+CGG - Chr4:80448130-80448149 None:intergenic 50.0%
GATTCCCTGTCTACTGTGTC+AGG + Chr4:80448130-80448149 MsG0480023074.01.T01:CDS 50.0%
GCAATCCTGACACAGTAGAC+AGG - Chr4:80448138-80448157 None:intergenic 50.0%
GCCATGGCTCTTACTACAGT+AGG - Chr4:80445146-80445165 None:intergenic 50.0%
GCCTACTGTAGTAAGAGCCA+TGG + Chr4:80445142-80445161 MsG0480023074.01.T01:CDS 50.0%
GGTGCAATTGGAGCAACAGT+TGG + Chr4:80444975-80444994 MsG0480023074.01.T01:CDS 50.0%
GTCTATCAGCTGGGTTACTC+AGG + Chr4:80444535-80444554 MsG0480023074.01.T01:CDS 50.0%
TCTTGCAGGGTCTATCAGCT+GGG + Chr4:80444526-80444545 MsG0480023074.01.T01:intron 50.0%
TGCCCTTAGGGCACAAGTTA+AGG - Chr4:80445552-80445571 None:intergenic 50.0%
TTCTTGCAGGGTCTATCAGC+TGG + Chr4:80444525-80444544 MsG0480023074.01.T01:intron 50.0%
! ACCGTATCGGTGCAGATGAA+GGG + Chr4:80445093-80445112 MsG0480023074.01.T01:CDS 50.0%
! CTTTCACTGTGGAAAGGTGC+TGG + Chr4:80445119-80445138 MsG0480023074.01.T01:CDS 50.0%
! GAAGCACCACCATTGACGAA+AGG - Chr4:80443968-80443987 None:intergenic 50.0%
! GAGCCATGGCATTGAACATG+GGG + Chr4:80445156-80445175 MsG0480023074.01.T01:CDS 50.0%
! GATACGGTAAAGTGCCTGGA+AGG - Chr4:80445081-80445100 None:intergenic 50.0%
! GCTGTGTTGTAGGCCCTTTT+TGG + Chr4:80448396-80448415 MsG0480023074.01.T01:three_prime_UTR 50.0%
! GTACTGAGTTGAGTAGGCAC+AGG + Chr4:80446890-80446909 MsG0480023074.01.T01:intron 50.0%
! TACCGTATCGGTGCAGATGA+AGG + Chr4:80445092-80445111 MsG0480023074.01.T01:CDS 50.0%
! TCCCTTCATCTGCACCGATA+CGG - Chr4:80445097-80445116 None:intergenic 50.0%
! TTCGTCAATGGTGGTGCTTC+TGG + Chr4:80443968-80443987 MsG0480023074.01.T01:CDS 50.0%
!! CCAATTTCTGGAGCTGGTTG+AGG - Chr4:80448299-80448318 None:intergenic 50.0%
!! GAGCTTTTTGGTAGAGTGGC+AGG - Chr4:80444938-80444957 None:intergenic 50.0%
!! GCTCCTTAACTTGTGCCCTA+AGG + Chr4:80445546-80445565 MsG0480023074.01.T01:intron 50.0%
!! GCTTTTTGGTAGAGTGGCAG+GGG - Chr4:80444936-80444955 None:intergenic 50.0%
AAGCCTAAGCCTGTTGCTGC+TGG + Chr4:80443923-80443942 MsG0480023074.01.T01:CDS 55.0%
ACTTACACCACTGCACGCCT+TGG + Chr4:80444564-80444583 MsG0480023074.01.T01:CDS 55.0%
ATCAGCTGGGTTACTCAGGC+AGG + Chr4:80444539-80444558 MsG0480023074.01.T01:CDS 55.0%
CAGGATTGCTCCCCATGTCA+TGG + Chr4:80448149-80448168 MsG0480023074.01.T01:CDS 55.0%
CAGTCAAGAGAGCCGGTGTA+TGG - Chr4:80448063-80448082 None:intergenic 55.0%
GACAGCACAGTCAAGAGAGC+CGG - Chr4:80448070-80448089 None:intergenic 55.0%
! CACCGATACGGTAAAGTGCC+TGG - Chr4:80445085-80445104 None:intergenic 55.0%
! TAGTTTCGGCGCTGAGCAAG+AGG - Chr4:80445050-80445069 None:intergenic 55.0%
!! AGCCTGTTGCTGCTGGTTTC+TGG + Chr4:80443930-80443949 MsG0480023074.01.T01:CDS 55.0%
GGCCAGAAACCAGCAGCAAC+AGG - Chr4:80443935-80443954 None:intergenic 60.0%
GGGCTGACTGCTGGTGCAAT+TGG + Chr4:80444963-80444982 MsG0480023074.01.T01:CDS 60.0%
TGGCAGGGGCTTGCCATCAT+TGG - Chr4:80444922-80444941 None:intergenic 60.0%
! GCTCTATGTGGGCTGACTGC+TGG + Chr4:80444954-80444973 MsG0480023074.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 80443687 80448740 80443687 ID=MsG0480023074.01;Name=MsG0480023074.01
Chr4 mRNA 80443687 80448740 80443687 ID=MsG0480023074.01.T01;Parent=MsG0480023074.01;Name=MsG0480023074.01.T01;_AED=0.45;_eAED=0.48;_QI=221|0.66|0.85|1|1|1|7|402|332
Chr4 exon 80443687 80444033 80443687 ID=MsG0480023074.01.T01:exon:11210;Parent=MsG0480023074.01.T01
Chr4 exon 80444143 80444226 80444143 ID=MsG0480023074.01.T01:exon:11211;Parent=MsG0480023074.01.T01
Chr4 exon 80444308 80444400 80444308 ID=MsG0480023074.01.T01:exon:11212;Parent=MsG0480023074.01.T01
Chr4 exon 80444534 80444595 80444534 ID=MsG0480023074.01.T01:exon:11213;Parent=MsG0480023074.01.T01
Chr4 exon 80444893 80445254 80444893 ID=MsG0480023074.01.T01:exon:11214;Parent=MsG0480023074.01.T01
Chr4 exon 80447956 80448170 80447956 ID=MsG0480023074.01.T01:exon:11215;Parent=MsG0480023074.01.T01
Chr4 exon 80448282 80448740 80448282 ID=MsG0480023074.01.T01:exon:11216;Parent=MsG0480023074.01.T01
Chr4 five_prime_UTR 80443687 80443907 80443687 ID=MsG0480023074.01.T01:five_prime_utr;Parent=MsG0480023074.01.T01
Chr4 CDS 80443908 80444033 80443908 ID=MsG0480023074.01.T01:cds;Parent=MsG0480023074.01.T01
Chr4 CDS 80444143 80444226 80444143 ID=MsG0480023074.01.T01:cds;Parent=MsG0480023074.01.T01
Chr4 CDS 80444308 80444400 80444308 ID=MsG0480023074.01.T01:cds;Parent=MsG0480023074.01.T01
Chr4 CDS 80444534 80444595 80444534 ID=MsG0480023074.01.T01:cds;Parent=MsG0480023074.01.T01
Chr4 CDS 80444893 80445254 80444893 ID=MsG0480023074.01.T01:cds;Parent=MsG0480023074.01.T01
Chr4 CDS 80447956 80448170 80447956 ID=MsG0480023074.01.T01:cds;Parent=MsG0480023074.01.T01
Chr4 CDS 80448282 80448338 80448282 ID=MsG0480023074.01.T01:cds;Parent=MsG0480023074.01.T01
Chr4 three_prime_UTR 80448339 80448740 80448339 ID=MsG0480023074.01.T01:three_prime_utr;Parent=MsG0480023074.01.T01
Gene Sequence

>MsG0480023074.01.T01

ATGGGAGACGAGAAGAAGCCTAAGCCTGTTGCTGCTGGTTTCTGGCCAACCATCAAGCCTTTCGTCAATGGTGGTGCTTCTGGTATGCTCGCTACCTGTGTTATTCAACCTATTGATATGATCAAGGTTAGGATTCAACTGGGTCAAGGTTCAGCTGCTAGTGTCACTTCTACCATGCTTAAGAATGAGGGTGTTGGTGCTTTCTATAAGTGGATAAGATTTGTGTTGATAATTTCAATGTGGGATGATTGTGATATTGATTATGATGCATTTTTATTGTTTTATTTACCTGCTTTTAGATCTGGTCTATCAGCTGGGTTACTCAGGCAGGCTACTTACACCACTGCACGCCTTGGAACATTTAGAATCTTGACAAATAAAGCAATTGAGGCCAATGATGGCAAGCCCCTGCCACTCTACCAAAAAGCTCTATGTGGGCTGACTGCTGGTGCAATTGGAGCAACAGTTGGTAGTCCAGCTGATTTGGCACTCATTCGTATGCAGGCTGATGCGACTTTACCTCTTGCTCAGCGCCGAAACTACACAAACGCCTTCCAGGCACTTTACCGTATCGGTGCAGATGAAGGGATTCTTTCACTGTGGAAAGGTGCTGGGCCTACTGTAGTAAGAGCCATGGCATTGAACATGGGGATGCTTGCTTCTTATGATCAAAGTGTTGAGTTCTTCAAGGATACCGTTGGTCTAGGTGAAATGACTACTGTGGTTGGTGCAAGTAGTGTATCTGGATTTTTCGCAGCAGCTTGCAGTTTGCCATTTGATTATGTGAAGACTCAAATTCAAAAGATGCAACCTGATGCTGAGGGAAAATATCCATACACCGGCTCTCTTGACTGTGCTGTCAAGACCTTCAAATCTGGAGGACCCTTCAAATTTTACACCGGATTCCCTGTCTACTGTGTCAGGATTGCTCCCCATGTCATGATGACATGGATTTTCCTCAACCAGCTCCAGAAATTGGAGAAAAGTTATGGGTTATAG
Protein sequence

>MsG0480023074.01.T01

MGDEKKPKPVAAGFWPTIKPFVNGGASGMLATCVIQPIDMIKVRIQLGQGSAASVTSTMLKNEGVGAFYKWIRFVLIISMWDDCDIDYDAFLLFYLPAFRSGLSAGLLRQATYTTARLGTFRILTNKAIEANDGKPLPLYQKALCGLTAGAIGATVGSPADLALIRMQADATLPLAQRRNYTNAFQALYRIGADEGILSLWKGAGPTVVRAMALNMGMLASYDQSVEFFKDTVGLGEMTTVVGASSVSGFFAAACSLPFDYVKTQIQKMQPDAEGKYPYTGSLDCAVKTFKSGGPFKFYTGFPVYCVRIAPHVMMTWIFLNQLQKLEKSYGL*