Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034341.01.T01 | XP_004497487.1 | 73.236 | 411 | 85 | 1 | 9 | 394 | 145 | 555 | 0 | 638 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034341.01.T01 | Q6Q3H3 | 52.555 | 411 | 170 | 1 | 9 | 394 | 146 | 556 | 3.06E-158 | 459 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034341.01.T01 | A0A1S2Y0Q7 | 73.236 | 411 | 85 | 1 | 9 | 394 | 145 | 555 | 0.0 | 638 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0680034307.01 | MsG0680034341.01 | 0.816205 | 6.235343e-52 | 4.390327e-49 |
| MsG0680034325.01 | MsG0680034341.01 | 0.816948 | 4.250387e-52 | 3.054313e-49 |
| MsG0680034334.01 | MsG0680034341.01 | 0.840727 | 7.306454e-58 | 1.050166e-54 |
| MsG0280009232.01 | MsG0680034341.01 | 0.821530 | 3.844060e-53 | 3.135330e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680034341.01 | MsG0280009520.01 | PPI |
| MsG0880044118.01 | MsG0680034341.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034341.01.T01 | MTR_6g039440 | 68.127 | 411 | 106 | 1 | 9 | 394 | 142 | 552 | 0.0 | 584 |
| MsG0680034341.01.T01 | MTR_4g048460 | 67.883 | 411 | 107 | 1 | 9 | 394 | 150 | 560 | 0.0 | 572 |
| MsG0680034341.01.T01 | MTR_5g062230 | 66.667 | 411 | 112 | 1 | 9 | 394 | 142 | 552 | 0.0 | 568 |
| MsG0680034341.01.T01 | MTR_6g008560 | 64.720 | 411 | 120 | 1 | 9 | 394 | 146 | 556 | 0.0 | 562 |
| MsG0680034341.01.T01 | MTR_5g094620 | 63.504 | 411 | 125 | 1 | 9 | 394 | 126 | 536 | 0.0 | 550 |
| MsG0680034341.01.T01 | MTR_6g008560 | 64.250 | 400 | 118 | 1 | 20 | 394 | 1 | 400 | 0.0 | 546 |
| MsG0680034341.01.T01 | MTR_3g464190 | 63.902 | 410 | 123 | 1 | 9 | 393 | 146 | 555 | 0.0 | 543 |
| MsG0680034341.01.T01 | MTR_5g073260 | 62.287 | 411 | 130 | 1 | 9 | 394 | 141 | 551 | 0.0 | 532 |
| MsG0680034341.01.T01 | MTR_5g073200 | 63.171 | 410 | 126 | 1 | 9 | 393 | 138 | 547 | 0.0 | 530 |
| MsG0680034341.01.T01 | MTR_4g081460 | 57.524 | 412 | 150 | 1 | 9 | 395 | 151 | 562 | 4.01e-172 | 493 |
| MsG0680034341.01.T01 | MTR_4g048460 | 71.769 | 294 | 83 | 0 | 9 | 302 | 150 | 443 | 1.14e-150 | 434 |
| MsG0680034341.01.T01 | MTR_8g007515 | 45.060 | 415 | 196 | 6 | 9 | 393 | 142 | 554 | 6.55e-121 | 362 |
| MsG0680034341.01.T01 | MTR_2g082010 | 43.341 | 413 | 204 | 6 | 9 | 393 | 156 | 566 | 2.62e-117 | 353 |
| MsG0680034341.01.T01 | MTR_2g081980 | 43.237 | 414 | 204 | 6 | 9 | 393 | 144 | 555 | 2.87e-115 | 347 |
| MsG0680034341.01.T01 | MTR_2g082060 | 42.169 | 415 | 197 | 8 | 9 | 393 | 150 | 551 | 3.22e-106 | 324 |
| MsG0680034341.01.T01 | MTR_4g019550 | 39.618 | 419 | 206 | 7 | 9 | 393 | 151 | 556 | 2.80e-99 | 306 |
| MsG0680034341.01.T01 | MTR_2g082050 | 39.036 | 415 | 190 | 8 | 9 | 395 | 80 | 459 | 1.14e-96 | 296 |
| MsG0680034341.01.T01 | MTR_2g089120 | 34.940 | 415 | 238 | 7 | 9 | 395 | 155 | 565 | 7.74e-80 | 256 |
| MsG0680034341.01.T01 | MTR_5g094530 | 59.174 | 218 | 53 | 3 | 30 | 245 | 1 | 184 | 1.82e-79 | 243 |
| MsG0680034341.01.T01 | MTR_2g089130 | 33.981 | 412 | 243 | 4 | 9 | 394 | 155 | 563 | 2.09e-79 | 255 |
| MsG0680034341.01.T01 | MTR_4g045810 | 33.820 | 411 | 246 | 2 | 9 | 393 | 169 | 579 | 6.26e-79 | 254 |
| MsG0680034341.01.T01 | MTR_2g064425 | 33.656 | 413 | 247 | 5 | 9 | 395 | 160 | 571 | 2.24e-73 | 239 |
| MsG0680034341.01.T01 | MTR_2g064425 | 33.656 | 413 | 247 | 5 | 9 | 395 | 175 | 586 | 2.54e-73 | 239 |
| MsG0680034341.01.T01 | MTR_8g057020 | 32.850 | 414 | 250 | 6 | 9 | 395 | 177 | 589 | 2.82e-66 | 221 |
| MsG0680034341.01.T01 | MTR_7g057340 | 56.725 | 171 | 49 | 1 | 249 | 394 | 1 | 171 | 9.31e-66 | 207 |
| MsG0680034341.01.T01 | MTR_2g065450 | 32.930 | 413 | 249 | 4 | 9 | 394 | 178 | 589 | 6.88e-64 | 214 |
| MsG0680034341.01.T01 | MTR_7g057390 | 57.143 | 168 | 50 | 1 | 249 | 394 | 1 | 168 | 7.11e-64 | 202 |
| MsG0680034341.01.T01 | MTR_7g010710 | 31.358 | 405 | 250 | 3 | 16 | 392 | 148 | 552 | 4.46e-62 | 209 |
| MsG0680034341.01.T01 | MTR_7g050990 | 60.843 | 166 | 54 | 2 | 63 | 228 | 27 | 181 | 9.08e-60 | 208 |
| MsG0680034341.01.T01 | MTR_4g092020 | 31.643 | 414 | 251 | 7 | 9 | 393 | 159 | 569 | 7.52e-59 | 201 |
| MsG0680034341.01.T01 | MTR_2g064425 | 44.017 | 234 | 127 | 3 | 9 | 240 | 160 | 391 | 2.10e-58 | 196 |
| MsG0680034341.01.T01 | MTR_2g064425 | 44.017 | 234 | 127 | 3 | 9 | 240 | 175 | 406 | 3.42e-58 | 196 |
| MsG0680034341.01.T01 | MTR_4g092010 | 28.883 | 412 | 258 | 6 | 4 | 387 | 152 | 556 | 6.38e-56 | 193 |
| MsG0680034341.01.T01 | MTR_6g065040 | 28.030 | 396 | 253 | 6 | 9 | 373 | 2 | 396 | 9.51e-49 | 170 |
| MsG0680034341.01.T01 | MTR_6g064980 | 27.750 | 400 | 257 | 6 | 9 | 377 | 104 | 502 | 2.50e-48 | 172 |
| MsG0680034341.01.T01 | MTR_2g010960 | 27.208 | 419 | 256 | 8 | 9 | 386 | 108 | 518 | 2.65e-48 | 172 |
| MsG0680034341.01.T01 | MTR_3g465090 | 27.273 | 396 | 256 | 5 | 9 | 373 | 104 | 498 | 1.08e-46 | 167 |
| MsG0680034341.01.T01 | MTR_3g063170 | 26.980 | 404 | 261 | 7 | 16 | 386 | 111 | 513 | 1.25e-45 | 164 |
| MsG0680034341.01.T01 | MTR_3g063120 | 26.214 | 412 | 270 | 7 | 9 | 389 | 80 | 488 | 2.33e-45 | 163 |
| MsG0680034341.01.T01 | MTR_3g052120 | 27.407 | 405 | 260 | 7 | 16 | 389 | 111 | 512 | 4.71e-45 | 163 |
| MsG0680034341.01.T01 | MTR_3g063140 | 27.020 | 396 | 257 | 6 | 9 | 373 | 104 | 498 | 6.57e-44 | 160 |
| MsG0680034341.01.T01 | MTR_3g015080 | 46.104 | 154 | 54 | 2 | 249 | 394 | 1 | 133 | 8.33e-38 | 133 |
| MsG0680034341.01.T01 | MTR_2g012870 | 28.114 | 281 | 182 | 7 | 19 | 283 | 343 | 619 | 9.38e-24 | 103 |
| MsG0680034341.01.T01 | MTR_3g058160 | 25.220 | 341 | 221 | 10 | 16 | 325 | 147 | 484 | 6.68e-22 | 98.2 |
| MsG0680034341.01.T01 | MTR_3g058160 | 25.220 | 341 | 221 | 10 | 16 | 325 | 351 | 688 | 7.73e-22 | 98.2 |
| MsG0680034341.01.T01 | MTR_3g058160 | 25.220 | 341 | 221 | 10 | 16 | 325 | 338 | 675 | 8.70e-22 | 98.2 |
| MsG0680034341.01.T01 | MTR_3g058160 | 25.220 | 341 | 221 | 10 | 16 | 325 | 358 | 695 | 1.03e-21 | 97.8 |
| MsG0680034341.01.T01 | MTR_2g064295 | 22.897 | 428 | 275 | 13 | 16 | 393 | 338 | 760 | 7.69e-21 | 95.1 |
| MsG0680034341.01.T01 | MTR_2g012900 | 25.517 | 290 | 187 | 8 | 19 | 283 | 348 | 633 | 4.65e-20 | 92.8 |
| MsG0680034341.01.T01 | MTR_3g063160 | 30.168 | 179 | 122 | 3 | 16 | 192 | 111 | 288 | 9.10e-20 | 89.0 |
| MsG0680034341.01.T01 | MTR_3g058160 | 24.309 | 362 | 219 | 11 | 16 | 325 | 358 | 716 | 3.39e-19 | 90.1 |
| MsG0680034341.01.T01 | MTR_5g081730 | 40.625 | 96 | 57 | 0 | 26 | 121 | 16 | 111 | 9.85e-15 | 71.6 |
| MsG0680034341.01.T01 | MTR_7g011663 | 31.694 | 183 | 99 | 4 | 17 | 174 | 435 | 616 | 9.95e-13 | 70.5 |
| MsG0680034341.01.T01 | MTR_7g094970 | 26.842 | 190 | 117 | 4 | 9 | 177 | 289 | 477 | 1.14e-12 | 70.1 |
| MsG0680034341.01.T01 | MTR_5g030050 | 27.895 | 190 | 114 | 5 | 9 | 176 | 69 | 257 | 5.38e-12 | 66.6 |
| MsG0680034341.01.T01 | MTR_7g011770 | 30.882 | 204 | 118 | 5 | 17 | 198 | 331 | 533 | 9.77e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034341.01.T01 | AT5G23960 | 39.416 | 411 | 223 | 2 | 9 | 394 | 135 | 544 | 5.61e-109 | 331 |
| MsG0680034341.01.T01 | AT5G23960 | 39.467 | 413 | 222 | 3 | 9 | 394 | 135 | 546 | 4.28e-108 | 328 |
| MsG0680034341.01.T01 | AT3G14490 | 38.462 | 416 | 225 | 6 | 9 | 394 | 186 | 600 | 7.64e-91 | 286 |
| MsG0680034341.01.T01 | AT1G31950 | 36.538 | 416 | 234 | 3 | 9 | 394 | 190 | 605 | 2.22e-90 | 285 |
| MsG0680034341.01.T01 | AT1G31950 | 36.538 | 416 | 234 | 3 | 9 | 394 | 191 | 606 | 2.23e-90 | 285 |
| MsG0680034341.01.T01 | AT3G14520 | 36.058 | 416 | 236 | 4 | 9 | 394 | 188 | 603 | 1.99e-88 | 280 |
| MsG0680034341.01.T01 | AT1G70080 | 36.538 | 416 | 233 | 4 | 9 | 393 | 194 | 609 | 2.70e-87 | 276 |
| MsG0680034341.01.T01 | AT3G14540 | 36.779 | 416 | 233 | 3 | 9 | 394 | 185 | 600 | 1.65e-86 | 274 |
| MsG0680034341.01.T01 | AT1G33750 | 34.140 | 413 | 244 | 3 | 9 | 394 | 191 | 602 | 9.95e-83 | 265 |
| MsG0680034341.01.T01 | AT5G44630 | 35.024 | 414 | 240 | 4 | 9 | 393 | 142 | 555 | 1.67e-82 | 263 |
| MsG0680034341.01.T01 | AT3G32030 | 33.092 | 414 | 248 | 4 | 11 | 395 | 191 | 604 | 1.39e-79 | 256 |
| MsG0680034341.01.T01 | AT4G20200 | 34.699 | 415 | 240 | 6 | 9 | 393 | 189 | 602 | 1.79e-79 | 256 |
| MsG0680034341.01.T01 | AT3G29410 | 33.172 | 413 | 249 | 3 | 9 | 394 | 85 | 497 | 1.82e-79 | 253 |
| MsG0680034341.01.T01 | AT3G29190 | 33.652 | 419 | 241 | 6 | 9 | 394 | 186 | 600 | 1.27e-78 | 254 |
| MsG0680034341.01.T01 | AT3G29410 | 33.172 | 413 | 249 | 3 | 9 | 394 | 190 | 602 | 3.41e-78 | 253 |
| MsG0680034341.01.T01 | AT4G13280 | 34.783 | 414 | 241 | 4 | 9 | 393 | 139 | 552 | 4.42e-78 | 251 |
| MsG0680034341.01.T01 | AT4G13300 | 34.541 | 414 | 242 | 4 | 9 | 393 | 139 | 552 | 2.65e-76 | 246 |
| MsG0680034341.01.T01 | AT4G15870 | 33.494 | 415 | 233 | 6 | 9 | 393 | 195 | 596 | 7.26e-76 | 246 |
| MsG0680034341.01.T01 | AT4G20210 | 32.924 | 407 | 244 | 4 | 16 | 393 | 192 | 598 | 5.36e-75 | 244 |
| MsG0680034341.01.T01 | AT1G31950 | 40.339 | 295 | 172 | 1 | 9 | 299 | 191 | 485 | 8.82e-75 | 242 |
| MsG0680034341.01.T01 | AT5G48110 | 35.294 | 340 | 190 | 6 | 80 | 393 | 2 | 337 | 5.63e-73 | 231 |
| MsG0680034341.01.T01 | AT4G13280 | 36.247 | 389 | 239 | 5 | 9 | 393 | 139 | 522 | 2.31e-72 | 235 |
| MsG0680034341.01.T01 | AT2G23230 | 33.577 | 411 | 244 | 5 | 9 | 390 | 185 | 595 | 4.79e-72 | 237 |
| MsG0680034341.01.T01 | AT3G14540 | 40.678 | 295 | 171 | 1 | 9 | 299 | 185 | 479 | 3.36e-71 | 232 |
| MsG0680034341.01.T01 | AT4G20230 | 32.203 | 413 | 250 | 5 | 9 | 391 | 189 | 601 | 1.66e-70 | 233 |
| MsG0680034341.01.T01 | AT4G20230 | 32.203 | 413 | 250 | 5 | 9 | 391 | 201 | 613 | 2.17e-70 | 233 |
| MsG0680034341.01.T01 | AT2G23230 | 33.333 | 411 | 240 | 6 | 9 | 390 | 185 | 590 | 1.72e-69 | 230 |
| MsG0680034341.01.T01 | AT3G29110 | 33.092 | 414 | 248 | 5 | 9 | 393 | 182 | 595 | 1.10e-68 | 228 |
| MsG0680034341.01.T01 | AT4G16730 | 29.858 | 422 | 260 | 6 | 9 | 394 | 71 | 492 | 1.40e-67 | 222 |
| MsG0680034341.01.T01 | AT4G16730 | 29.858 | 422 | 260 | 6 | 9 | 394 | 117 | 538 | 3.43e-67 | 222 |
| MsG0680034341.01.T01 | AT1G66020 | 31.884 | 414 | 253 | 4 | 9 | 393 | 183 | 596 | 9.02e-64 | 214 |
| MsG0680034341.01.T01 | AT1G48800 | 30.193 | 414 | 257 | 6 | 9 | 391 | 190 | 602 | 1.32e-62 | 211 |
| MsG0680034341.01.T01 | AT4G16740 | 30.958 | 407 | 252 | 6 | 16 | 394 | 158 | 563 | 8.45e-62 | 209 |
| MsG0680034341.01.T01 | AT3G25810 | 29.398 | 415 | 257 | 6 | 16 | 394 | 182 | 596 | 8.13e-60 | 204 |
| MsG0680034341.01.T01 | AT1G48820 | 29.684 | 411 | 241 | 7 | 9 | 388 | 164 | 557 | 1.17e-59 | 203 |
| MsG0680034341.01.T01 | AT3G25830 | 29.952 | 414 | 254 | 9 | 16 | 394 | 181 | 593 | 7.92e-58 | 199 |
| MsG0680034341.01.T01 | AT3G25820 | 29.952 | 414 | 254 | 9 | 16 | 394 | 181 | 593 | 7.92e-58 | 199 |
| MsG0680034341.01.T01 | AT2G24210 | 29.808 | 416 | 255 | 6 | 16 | 394 | 174 | 589 | 1.40e-57 | 198 |
| MsG0680034341.01.T01 | AT1G61680 | 29.114 | 395 | 250 | 3 | 9 | 373 | 156 | 550 | 1.55e-55 | 192 |
| MsG0680034341.01.T01 | AT1G61680 | 29.114 | 395 | 250 | 3 | 9 | 373 | 163 | 557 | 1.63e-55 | 192 |
| MsG0680034341.01.T01 | AT4G16740 | 38.389 | 211 | 125 | 1 | 16 | 221 | 158 | 368 | 8.26e-47 | 165 |
| MsG0680034341.01.T01 | AT1G66020 | 37.657 | 239 | 145 | 3 | 9 | 243 | 183 | 421 | 4.72e-46 | 164 |
| MsG0680034341.01.T01 | AT3G25820 | 31.818 | 242 | 161 | 3 | 16 | 253 | 181 | 422 | 5.04e-42 | 153 |
| MsG0680034341.01.T01 | AT4G16740 | 38.587 | 184 | 108 | 1 | 16 | 194 | 158 | 341 | 8.38e-39 | 143 |
| MsG0680034341.01.T01 | AT4G16740 | 38.587 | 184 | 108 | 1 | 16 | 194 | 158 | 341 | 8.38e-39 | 143 |
| MsG0680034341.01.T01 | AT3G25820 | 33.880 | 183 | 117 | 3 | 16 | 194 | 181 | 363 | 3.14e-33 | 128 |
| MsG0680034341.01.T01 | AT3G25820 | 33.880 | 183 | 117 | 3 | 16 | 194 | 181 | 363 | 3.14e-33 | 128 |
| MsG0680034341.01.T01 | AT1G79460 | 24.083 | 436 | 263 | 17 | 9 | 385 | 347 | 773 | 8.02e-18 | 85.9 |
| MsG0680034341.01.T01 | AT1G61120 | 22.276 | 413 | 273 | 12 | 20 | 393 | 379 | 782 | 4.51e-17 | 84.0 |
Find 67 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACTTACGTTGGCAAAAT+TGG | 0.135143 | 6:-85980447 | MsG0680034341.01.T01:CDS |
| AGCCTACATCAAAAGGAATT+TGG | 0.257080 | 6:-85980407 | MsG0680034341.01.T01:CDS |
| ACGTAAGTAGAATTTCATTA+TGG | 0.259315 | 6:+85980459 | None:intergenic |
| GATTCATGGTGAGAAAATTT+TGG | 0.259321 | 6:-85980645 | MsG0680034341.01.T01:CDS |
| GTCATCAATGTATGATAAAA+TGG | 0.271835 | 6:+85980138 | None:intergenic |
| TAGTTGTTTGGATGATCTTC+CGG | 0.341349 | 6:-85979789 | MsG0680034341.01.T01:CDS |
| GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6:-85980225 | MsG0680034341.01.T01:CDS |
| TTATATGAGGGAATATGATA+TGG | 0.360767 | 6:-85978365 | MsG0680034341.01.T01:CDS |
| CCAATTGAAGATATCATTTG+TGG | 0.372281 | 6:+85978971 | None:intergenic |
| TTCATGTACTCCTCTGTTGT+TGG | 0.374525 | 6:+85979062 | None:intergenic |
| CCACAAATGATATCTTCAAT+TGG | 0.377027 | 6:-85978971 | MsG0680034341.01.T01:CDS |
| CGTAAGTAGAATTTCATTAT+GGG | 0.378944 | 6:+85980460 | None:intergenic |
| AAACGTAATGGAACTTTAGT+TGG | 0.382677 | 6:+85978265 | None:intergenic |
| TAGGTGGGATATTAGTTGTT+TGG | 0.387739 | 6:-85979801 | MsG0680034341.01.T01:CDS |
| GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6:+85980481 | None:intergenic |
| CATACTTGGAATGTTATATG+AGG | 0.398446 | 6:-85978378 | MsG0680034341.01.T01:CDS |
| AGGACATGTTGCTTCATACT+TGG | 0.399041 | 6:-85978392 | MsG0680034341.01.T01:CDS |
| ATATAAATGAGGAATGTCTT+AGG | 0.410838 | 6:-85978288 | MsG0680034341.01.T01:CDS |
| TCGCAAGAGAAGGACTCAAT+TGG | 0.412353 | 6:+85980576 | None:intergenic |
| AAAAGAAAATTGACAATGCT+TGG | 0.419595 | 6:-85978315 | MsG0680034341.01.T01:CDS |
| TAGAGAAACTTCATGTAATC+CGG | 0.427919 | 6:+85979770 | None:intergenic |
| GTTTCTCTATAAACCACTCT+TGG | 0.439981 | 6:-85979756 | MsG0680034341.01.T01:CDS |
| GCTCCAAAGCCTACATCAAA+AGG | 0.450495 | 6:-85980414 | MsG0680034341.01.T01:CDS |
| TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6:-85979003 | MsG0680034341.01.T01:CDS |
| CACAAATGATATCTTCAATT+GGG | 0.456797 | 6:-85978970 | MsG0680034341.01.T01:intron |
| ACTACTCTGTCCCGTGCATA+AGG | 0.457542 | 6:+85980241 | None:intergenic |
| ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6:-85979002 | MsG0680034341.01.T01:CDS |
| GCCTCACATATGATGATTCA+TGG | 0.465433 | 6:-85980659 | MsG0680034341.01.T01:CDS |
| TTCCTTCCTTGACAATATTG+AGG | 0.467488 | 6:+85980181 | None:intergenic |
| ACCAAAATCAATGCTCATGT+TGG | 0.476318 | 6:+85978121 | None:intergenic |
| GAGCAAGAAGTGAAGAAAGA+AGG | 0.477567 | 6:-85979716 | MsG0680034341.01.T01:CDS |
| CGCAAGAGAAGGACTCAATT+GGG | 0.484801 | 6:+85980577 | None:intergenic |
| CCAAAATCAATGCTCATGTT+GGG | 0.485248 | 6:+85978122 | None:intergenic |
| AACATTGATCATAGATGTTG+AGG | 0.512550 | 6:-85980702 | MsG0680034341.01.T01:CDS |
| AACAATATCAAGTGGTTACC+CGG | 0.513550 | 6:-85979033 | MsG0680034341.01.T01:CDS |
| AGCCTCAATATTGTCAAGGA+AGG | 0.522252 | 6:-85980183 | MsG0680034341.01.T01:CDS |
| ATCAATGCTCATGTTGGGAT+GGG | 0.522554 | 6:+85978127 | None:intergenic |
| ATATAGGTGGTGGAAGGAGT+TGG | 0.524102 | 6:-85980281 | MsG0680034341.01.T01:intron |
| AATCAATGCTCATGTTGGGA+TGG | 0.533171 | 6:+85978126 | None:intergenic |
| TGGCCTCACTCATGTAAGCT+TGG | 0.536408 | 6:+85979108 | None:intergenic |
| ATCAAGTGGTTACCCGGTGT+TGG | 0.539295 | 6:-85979027 | MsG0680034341.01.T01:CDS |
| TAGCTTCTTGCCTCTAGCCT+AGG | 0.554871 | 6:+85980509 | None:intergenic |
| ATACTTGGAATGTTATATGA+GGG | 0.559157 | 6:-85978377 | MsG0680034341.01.T01:CDS |
| GACAAGCAAATCATTAATGT+AGG | 0.560101 | 6:+85978153 | None:intergenic |
| TTGACTTGTGTCGCAAGAGA+AGG | 0.560387 | 6:+85980566 | None:intergenic |
| CTTGCGACACAAGTCAAACA+TGG | 0.567322 | 6:-85980560 | MsG0680034341.01.T01:CDS |
| TTGGCTACGACTTCTTACAT+TGG | 0.575246 | 6:-85979008 | MsG0680034341.01.T01:CDS |
| AAGCTTACATGAGTGAGGCC+AGG | 0.576657 | 6:-85979106 | MsG0680034341.01.T01:CDS |
| TTGTCAAGGAAGGAAAATGA+TGG | 0.584374 | 6:-85980173 | MsG0680034341.01.T01:CDS |
| GATGACACGTATGATGCATA+CGG | 0.587584 | 6:-85980121 | MsG0680034341.01.T01:CDS |
| TAAGAAGTCGTAGCCAACAC+CGG | 0.589439 | 6:+85979014 | None:intergenic |
| AAGAAGTCGTAGCCAACACC+GGG | 0.590372 | 6:+85979015 | None:intergenic |
| ATTGGGTTGCAATTGACTCA+AGG | 0.594526 | 6:+85980594 | None:intergenic |
| AACACATCAACAATATCAAG+TGG | 0.595383 | 6:-85979041 | MsG0680034341.01.T01:CDS |
| TCTTCATAAACATCCAAGAG+TGG | 0.597368 | 6:+85979743 | None:intergenic |
| TTTGAGCCTCAATATTGTCA+AGG | 0.599174 | 6:-85980187 | MsG0680034341.01.T01:CDS |
| ACATTGATCATAGATGTTGA+GGG | 0.599537 | 6:-85980701 | MsG0680034341.01.T01:CDS |
| GACAACTACACACATTCTGA+AGG | 0.603730 | 6:-85978187 | MsG0680034341.01.T01:CDS |
| TAATGAAATTCTACTTACGT+TGG | 0.604203 | 6:-85980456 | MsG0680034341.01.T01:CDS |
| CTTTATATATAGGTGGTGGA+AGG | 0.614852 | 6:-85980287 | MsG0680034341.01.T01:intron |
| AAACCTCAATAAAACGCGAA+AGG | 0.623927 | 6:+85978224 | None:intergenic |
| TGCTTGGAAAGATATAAATG+AGG | 0.630445 | 6:-85978299 | MsG0680034341.01.T01:CDS |
| ACCATGAATCATCATATGTG+AGG | 0.641340 | 6:+85980658 | None:intergenic |
| ATAGTTAACATTCAACCACC+TGG | 0.654774 | 6:+85979088 | None:intergenic |
| AGTCCAAGCTTACATGAGTG+AGG | 0.665674 | 6:-85979111 | MsG0680034341.01.T01:CDS |
| CTTACATGAGTGAGGCCAGG+TGG | 0.678940 | 6:-85979103 | MsG0680034341.01.T01:CDS |
| TAACTATATACCAACAACAG+AGG | 0.706002 | 6:-85979072 | MsG0680034341.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTAATTTTAAATTAAGG+AGG | + | Chr6:85978519-85978538 | None:intergenic | 10.0% |
| !!! | ATTTAATTTTAAATTAAGGA+GGG | + | Chr6:85978518-85978537 | None:intergenic | 10.0% |
| !!! | TTATAATGAAAATGAATTTT+AGG | - | Chr6:85979049-85979068 | MsG0680034341.01.T01:CDS | 10.0% |
| !!! | TTTTATCATATATTTATACA+CGG | - | Chr6:85978992-85979011 | MsG0680034341.01.T01:CDS | 10.0% |
| !! | AATATAATAAGATGACATAA+TGG | - | Chr6:85980147-85980166 | MsG0680034341.01.T01:CDS | 15.0% |
| !! | AATATAGTAGAATTGTTAAT+AGG | + | Chr6:85979712-85979731 | None:intergenic | 15.0% |
| !! | TATAAAGACCAAAAATATAT+AGG | + | Chr6:85978569-85978588 | None:intergenic | 15.0% |
| !! | TATTATATTAACTCTTAAGA+CGG | + | Chr6:85980136-85980155 | None:intergenic | 15.0% |
| !!! | ATTAAATAATAACTTTTAGG+TGG | - | Chr6:85978928-85978947 | MsG0680034341.01.T01:intron | 15.0% |
| !!! | TATTTTTGGTCTTTATATAT+AGG | - | Chr6:85978572-85978591 | MsG0680034341.01.T01:intron | 15.0% |
| !!! | TGTTATCAGAATAAAATTTT+AGG | - | Chr6:85979301-85979320 | MsG0680034341.01.T01:intron | 15.0% |
| !! | AAGTCAAAAGTAATTAATCA+TGG | - | Chr6:85980267-85980286 | MsG0680034341.01.T01:CDS | 20.0% |
| !! | CATATTTACAAAAAATACAC+AGG | - | Chr6:85979671-85979690 | MsG0680034341.01.T01:intron | 20.0% |
| !!! | AATGAAAATGAATTTTAGGT+GGG | - | Chr6:85979053-85979072 | MsG0680034341.01.T01:CDS | 20.0% |
| !!! | ACTTCCATTTATTTTCTAAA+TGG | - | Chr6:85980354-85980373 | MsG0680034341.01.T01:intron | 20.0% |
| !!! | ATTGTTCATTTTTGTAAACA+AGG | - | Chr6:85980063-85980082 | MsG0680034341.01.T01:intron | 20.0% |
| !!! | GTTTTTCTATCTCTAAATTT+TGG | + | Chr6:85978863-85978882 | None:intergenic | 20.0% |
| !!! | TAATGAAAATGAATTTTAGG+TGG | - | Chr6:85979052-85979071 | MsG0680034341.01.T01:CDS | 20.0% |
| !!! | TCTAATTGCCTATATATTTT+TGG | - | Chr6:85978558-85978577 | MsG0680034341.01.T01:intron | 20.0% |
| !!! | TTGTGATTAGAACATTTTTA+GGG | - | Chr6:85979377-85979396 | MsG0680034341.01.T01:intron | 20.0% |
| !!! | TTTTGTTGAACTATTATCTA+CGG | + | Chr6:85979631-85979650 | None:intergenic | 20.0% |
| ! | AAAAGAAAATTGACAATGCT+TGG | - | Chr6:85980554-85980573 | MsG0680034341.01.T01:CDS | 25.0% |
| ! | ACGTAAGTAGAATTTCATTA+TGG | + | Chr6:85978413-85978432 | None:intergenic | 25.0% |
| ! | ATACTTGGAATGTTATATGA+GGG | - | Chr6:85980492-85980511 | MsG0680034341.01.T01:CDS | 25.0% |
| ! | ATATAAATGAGGAATGTCTT+AGG | - | Chr6:85980581-85980600 | MsG0680034341.01.T01:CDS | 25.0% |
| ! | ATTTCACACAATATTCTTTG+TGG | - | Chr6:85980020-85980039 | MsG0680034341.01.T01:intron | 25.0% |
| ! | CAAAAGTAATTAATCATGGT+GGG | - | Chr6:85980271-85980290 | MsG0680034341.01.T01:CDS | 25.0% |
| ! | CACAAATGATATCTTCAATT+GGG | - | Chr6:85979899-85979918 | MsG0680034341.01.T01:intron | 25.0% |
| ! | CGTAAGTAGAATTTCATTAT+GGG | + | Chr6:85978412-85978431 | None:intergenic | 25.0% |
| ! | CTCTCCATTTAGAAAATAAA+TGG | + | Chr6:85980361-85980380 | None:intergenic | 25.0% |
| ! | GATCTATGTATGTATCTATA+CGG | + | Chr6:85979347-85979366 | None:intergenic | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | + | Chr6:85978734-85978753 | None:intergenic | 25.0% |
| ! | TAATGAAATTCTACTTACGT+TGG | - | Chr6:85978413-85978432 | MsG0680034341.01.T01:intron | 25.0% |
| ! | TCAAAAGTAATTAATCATGG+TGG | - | Chr6:85980270-85980289 | MsG0680034341.01.T01:CDS | 25.0% |
| ! | TTATATGAGGGAATATGATA+TGG | - | Chr6:85980504-85980523 | MsG0680034341.01.T01:CDS | 25.0% |
| !! | ATAAATGGAAGTATGCAATT+TGG | + | Chr6:85980346-85980365 | None:intergenic | 25.0% |
| !! | CTTGTGATTAGAACATTTTT+AGG | - | Chr6:85979376-85979395 | MsG0680034341.01.T01:intron | 25.0% |
| !! | TGAGTTAGAACTTTTTACTA+AGG | - | Chr6:85978780-85978799 | MsG0680034341.01.T01:intron | 25.0% |
| !! | TTTTTACTAAGGCAATTGAA+AGG | - | Chr6:85978791-85978810 | MsG0680034341.01.T01:intron | 25.0% |
| !!! | AAGCATTGTCAATTTTCTTT+TGG | + | Chr6:85980555-85980574 | None:intergenic | 25.0% |
| !!! | CATTTATTTTCTAAATGGAG+AGG | - | Chr6:85980359-85980378 | MsG0680034341.01.T01:intron | 25.0% |
| !!! | TGTGATTAGAACATTTTTAG+GGG | - | Chr6:85979378-85979397 | MsG0680034341.01.T01:intron | 25.0% |
| !!! | TTCTTTTAAGAAGTGGTTAA+TGG | + | Chr6:85979190-85979209 | None:intergenic | 25.0% |
| !!! | TTTTGGTCTTTATATATAGG+TGG | - | Chr6:85978575-85978594 | MsG0680034341.01.T01:intron | 25.0% |
| AACACATCAACAATATCAAG+TGG | - | Chr6:85979828-85979847 | MsG0680034341.01.T01:intron | 30.0% | |
| AACATTGATCATAGATGTTG+AGG | - | Chr6:85978167-85978186 | MsG0680034341.01.T01:CDS | 30.0% | |
| ACATTGATCATAGATGTTGA+GGG | - | Chr6:85978168-85978187 | MsG0680034341.01.T01:CDS | 30.0% | |
| AGACACATAAAATAGGTAGT+GGG | + | Chr6:85980315-85980334 | None:intergenic | 30.0% | |
| ATCTTTCCAAATGGTAGAAA+TGG | + | Chr6:85980233-85980252 | None:intergenic | 30.0% | |
| CATACTTGGAATGTTATATG+AGG | - | Chr6:85980491-85980510 | MsG0680034341.01.T01:CDS | 30.0% | |
| CCAATTGAAGATATCATTTG+TGG | + | Chr6:85979901-85979920 | None:intergenic | 30.0% | |
| CCACAAATGATATCTTCAAT+TGG | - | Chr6:85979898-85979917 | MsG0680034341.01.T01:intron | 30.0% | |
| CTAAAAAACTACCTTATGCA+CGG | - | Chr6:85978617-85978636 | MsG0680034341.01.T01:intron | 30.0% | |
| GAAATGGAGAGGATAATAAA+TGG | + | Chr6:85980217-85980236 | None:intergenic | 30.0% | |
| GACAAGCAAATCATTAATGT+AGG | + | Chr6:85980719-85980738 | None:intergenic | 30.0% | |
| GAGAGATAGACACATAAAAT+AGG | + | Chr6:85980322-85980341 | None:intergenic | 30.0% | |
| GTTTAATGACTATGCAGTTA+CGG | + | Chr6:85980393-85980412 | None:intergenic | 30.0% | |
| TAAAAAACTACCTTATGCAC+GGG | - | Chr6:85978618-85978637 | MsG0680034341.01.T01:intron | 30.0% | |
| TAACTATATACCAACAACAG+AGG | - | Chr6:85979797-85979816 | MsG0680034341.01.T01:CDS | 30.0% | |
| TAGACACATAAAATAGGTAG+TGG | + | Chr6:85980316-85980335 | None:intergenic | 30.0% | |
| TAGAGAAACTTCATGTAATC+CGG | + | Chr6:85979102-85979121 | None:intergenic | 30.0% | |
| TGCTTGGAAAGATATAAATG+AGG | - | Chr6:85980570-85980589 | MsG0680034341.01.T01:CDS | 30.0% | |
| TGTGTCTTTATCTTTCCAAA+TGG | + | Chr6:85980242-85980261 | None:intergenic | 30.0% | |
| TTTAATGACTATGCAGTTAC+GGG | + | Chr6:85980392-85980411 | None:intergenic | 30.0% | |
| ! | AAACGTAATGGAACTTTAGT+TGG | + | Chr6:85980607-85980626 | None:intergenic | 30.0% |
| ! | ACAGCAGCATTAACAATTTT+CGG | + | Chr6:85979936-85979955 | None:intergenic | 30.0% |
| ! | ATTTTAAATTAAGGAGGGTG+TGG | + | Chr6:85978513-85978532 | None:intergenic | 30.0% |
| ! | GATTCATGGTGAGAAAATTT+TGG | - | Chr6:85978224-85978243 | MsG0680034341.01.T01:CDS | 30.0% |
| ! | TTCCAAATTCCTTTTGATGT+AGG | + | Chr6:85978467-85978486 | None:intergenic | 30.0% |
| ! | TTCTAATCACAAGATTTGCT+AGG | + | Chr6:85979369-85979388 | None:intergenic | 30.0% |
| ! | TTTCTTTTGGCATTCTTGAA+TGG | + | Chr6:85980542-85980561 | None:intergenic | 30.0% |
| !! | CTCTTACTTCTTTTAAGAAG+TGG | + | Chr6:85979197-85979216 | None:intergenic | 30.0% |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | - | Chr6:85978645-85978664 | MsG0680034341.01.T01:intron | 30.0% |
| AAACAGTTCGAGCAAAAAAG+AGG | - | Chr6:85980457-85980476 | MsG0680034341.01.T01:CDS | 35.0% | |
| AAACCTCAATAAAACGCGAA+AGG | + | Chr6:85980648-85980667 | None:intergenic | 35.0% | |
| AACAATATCAAGTGGTTACC+CGG | - | Chr6:85979836-85979855 | MsG0680034341.01.T01:intron | 35.0% | |
| ACACACGTCAAAAAACGTAA+TGG | + | Chr6:85980619-85980638 | None:intergenic | 35.0% | |
| ACCATGAATCATCATATGTG+AGG | + | Chr6:85978214-85978233 | None:intergenic | 35.0% | |
| ACGACTTCTTACATTGGAAT+GGG | - | Chr6:85979867-85979886 | MsG0680034341.01.T01:intron | 35.0% | |
| AGCCTACATCAAAAGGAATT+TGG | - | Chr6:85978462-85978481 | MsG0680034341.01.T01:intron | 35.0% | |
| ATAGTTAACATTCAACCACC+TGG | + | Chr6:85979784-85979803 | None:intergenic | 35.0% | |
| CAAAAAATACACAGGAGTTC+AGG | - | Chr6:85979679-85979698 | MsG0680034341.01.T01:intron | 35.0% | |
| GTTTCTCTATAAACCACTCT+TGG | - | Chr6:85979113-85979132 | MsG0680034341.01.T01:CDS | 35.0% | |
| TACGACTTCTTACATTGGAA+TGG | - | Chr6:85979866-85979885 | MsG0680034341.01.T01:intron | 35.0% | |
| TAGGTGGGATATTAGTTGTT+TGG | - | Chr6:85979068-85979087 | MsG0680034341.01.T01:CDS | 35.0% | |
| TAGTTGTTTGGATGATCTTC+CGG | - | Chr6:85979080-85979099 | MsG0680034341.01.T01:CDS | 35.0% | |
| TCTACTTACGTTGGCAAAAT+TGG | - | Chr6:85978422-85978441 | MsG0680034341.01.T01:intron | 35.0% | |
| TCTTCATAAACATCCAAGAG+TGG | + | Chr6:85979129-85979148 | None:intergenic | 35.0% | |
| TGGTCTTTATATATAGGTGG+TGG | - | Chr6:85978578-85978597 | MsG0680034341.01.T01:intron | 35.0% | |
| TTCCTTCCTTGACAATATTG+AGG | + | Chr6:85978691-85978710 | None:intergenic | 35.0% | |
| TTGTCAAGGAAGGAAAATGA+TGG | - | Chr6:85978696-85978715 | MsG0680034341.01.T01:intron | 35.0% | |
| TTTGAGCCTCAATATTGTCA+AGG | - | Chr6:85978682-85978701 | MsG0680034341.01.T01:intron | 35.0% | |
| ! | ACTTTTACACTGTAACTGCA+GGG | - | Chr6:85980179-85980198 | MsG0680034341.01.T01:CDS | 35.0% |
| ! | ATTCCTTTTGATGTAGGCTT+TGG | + | Chr6:85978461-85978480 | None:intergenic | 35.0% |
| !! | CTTTATATATAGGTGGTGGA+AGG | - | Chr6:85978582-85978601 | MsG0680034341.01.T01:intron | 35.0% |
| !! | GAAAATTTTGGAAGAGGCAT+TGG | - | Chr6:85978236-85978255 | MsG0680034341.01.T01:CDS | 35.0% |
| !! | TGGTGAGAAAATTTTGGAAG+AGG | - | Chr6:85978230-85978249 | MsG0680034341.01.T01:CDS | 35.0% |
| !!! | ATGTTGCTTTTGGGTTATGA+CGG | - | Chr6:85978654-85978673 | MsG0680034341.01.T01:intron | 35.0% |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | - | Chr6:85978644-85978663 | MsG0680034341.01.T01:intron | 35.0% |
| AGCCTCAATATTGTCAAGGA+AGG | - | Chr6:85978686-85978705 | MsG0680034341.01.T01:intron | 40.0% | |
| GACAACTACACACATTCTGA+AGG | - | Chr6:85980682-85980701 | MsG0680034341.01.T01:CDS | 40.0% | |
| GAGCAAGAAGTGAAGAAAGA+AGG | - | Chr6:85979153-85979172 | MsG0680034341.01.T01:intron | 40.0% | |
| GATGACACGTATGATGCATA+CGG | - | Chr6:85978748-85978767 | MsG0680034341.01.T01:intron | 40.0% | |
| GCCTCACATATGATGATTCA+TGG | - | Chr6:85978210-85978229 | MsG0680034341.01.T01:CDS | 40.0% | |
| GGAGAGGATAATAAATGGAG+AGG | + | Chr6:85980212-85980231 | None:intergenic | 40.0% | |
| GGATGAATCTTGCTCATAGA+TGG | + | Chr6:85978391-85978410 | None:intergenic | 40.0% | |
| GTATGTATCTATACGGAGAG+TGG | + | Chr6:85979340-85979359 | None:intergenic | 40.0% | |
| TCCAAATGGTAGAAATGGAG+AGG | + | Chr6:85980228-85980247 | None:intergenic | 40.0% | |
| TCCTCTCCATTTCTACCATT+TGG | - | Chr6:85980224-85980243 | MsG0680034341.01.T01:CDS | 40.0% | |
| TGTTGTTCATTGCAGGCTTA+GGG | - | Chr6:85979953-85979972 | MsG0680034341.01.T01:intron | 40.0% | |
| TTCATGTACTCCTCTGTTGT+TGG | + | Chr6:85979810-85979829 | None:intergenic | 40.0% | |
| TTGGCTACGACTTCTTACAT+TGG | - | Chr6:85979861-85979880 | MsG0680034341.01.T01:intron | 40.0% | |
| ! | AGGACATGTTGCTTCATACT+TGG | - | Chr6:85980477-85980496 | MsG0680034341.01.T01:CDS | 40.0% |
| ! | AGTGGGTTCTACCATAAAGT+GGG | + | Chr6:85980298-85980317 | None:intergenic | 40.0% |
| ! | ATTGGGTTGCAATTGACTCA+AGG | + | Chr6:85978278-85978297 | None:intergenic | 40.0% |
| ! | GACTTTTACACTGTAACTGC+AGG | - | Chr6:85980178-85980197 | MsG0680034341.01.T01:CDS | 40.0% |
| !! | CAACCTTTCGCGTTTTATTG+AGG | - | Chr6:85980642-85980661 | MsG0680034341.01.T01:CDS | 40.0% |
| !! | TAGTGGGTTCTACCATAAAG+TGG | + | Chr6:85980299-85980318 | None:intergenic | 40.0% |
| AGTCCAAGCTTACATGAGTG+AGG | - | Chr6:85979758-85979777 | MsG0680034341.01.T01:CDS | 45.0% | |
| ATGCTGCTGTTGTTCATTGC+AGG | - | Chr6:85979946-85979965 | MsG0680034341.01.T01:intron | 45.0% | |
| CAAAAACTTGCCTAGGCTAG+AGG | - | Chr6:85978350-85978369 | MsG0680034341.01.T01:CDS | 45.0% | |
| CGCAAGAGAAGGACTCAATT+GGG | + | Chr6:85978295-85978314 | None:intergenic | 45.0% | |
| CTGTTGTTCATTGCAGGCTT+AGG | - | Chr6:85979952-85979971 | MsG0680034341.01.T01:intron | 45.0% | |
| CTTGCGACACAAGTCAAACA+TGG | - | Chr6:85978309-85978328 | MsG0680034341.01.T01:CDS | 45.0% | |
| GCTCCAAAGCCTACATCAAA+AGG | - | Chr6:85978455-85978474 | MsG0680034341.01.T01:intron | 45.0% | |
| TAAGAAGTCGTAGCCAACAC+CGG | + | Chr6:85979858-85979877 | None:intergenic | 45.0% | |
| TCGCAAGAGAAGGACTCAAT+TGG | + | Chr6:85978296-85978315 | None:intergenic | 45.0% | |
| !! | ATATAGGTGGTGGAAGGAGT+TGG | - | Chr6:85978588-85978607 | MsG0680034341.01.T01:intron | 45.0% |
| !! | TTGACTTGTGTCGCAAGAGA+AGG | + | Chr6:85978306-85978325 | None:intergenic | 45.0% |
| !!! | GAGGCATTGGCTTTTACTTC+TGG | - | Chr6:85978249-85978268 | MsG0680034341.01.T01:CDS | 45.0% |
| !! | TTTAAAAAAAGATTATATAT+TGG | - | Chr6:85979593-85979612 | MsG0680034341.01.T01:intron | 5.0% |
| !!! | AAAATTAAATAATAACTTTT+AGG | - | Chr6:85978925-85978944 | MsG0680034341.01.T01:intron | 5.0% |
| !!! | TTCAATTTAATTTTAAATTA+AGG | + | Chr6:85978522-85978541 | None:intergenic | 5.0% |
| AAGAAGTCGTAGCCAACACC+GGG | + | Chr6:85979857-85979876 | None:intergenic | 50.0% | |
| AAGCTTACATGAGTGAGGCC+AGG | - | Chr6:85979763-85979782 | MsG0680034341.01.T01:CDS | 50.0% | |
| ACTACTCTGTCCCGTGCATA+AGG | + | Chr6:85978631-85978650 | None:intergenic | 50.0% | |
| ATCAAGTGGTTACCCGGTGT+TGG | - | Chr6:85979842-85979861 | MsG0680034341.01.T01:intron | 50.0% | |
| CTCTGCGCAAAAACTTGCCT+AGG | - | Chr6:85978343-85978362 | MsG0680034341.01.T01:CDS | 50.0% | |
| TAGCTTCTTGCCTCTAGCCT+AGG | + | Chr6:85978363-85978382 | None:intergenic | 50.0% | |
| TGGCCTCACTCATGTAAGCT+TGG | + | Chr6:85979764-85979783 | None:intergenic | 50.0% | |
| ! | CTAGGCAAGTTTTTGCGCAG+AGG | + | Chr6:85978345-85978364 | None:intergenic | 50.0% |
| ! | TCATGGTGGGACCCACTTTA+TGG | - | Chr6:85980284-85980303 | MsG0680034341.01.T01:intron | 50.0% |
| CTTACATGAGTGAGGCCAGG+TGG | - | Chr6:85979766-85979785 | MsG0680034341.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 85978135 | 85980756 | 85978135 | ID=MsG0680034341.01;Name=MsG0680034341.01 |
| Chr6 | mRNA | 85978135 | 85980756 | 85978135 | ID=MsG0680034341.01.T01;Parent=MsG0680034341.01;Name=MsG0680034341.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|1|1|5|0|395 |
| Chr6 | exon | 85980395 | 85980756 | 85980395 | ID=MsG0680034341.01.T01:exon:13027;Parent=MsG0680034341.01.T01 |
| Chr6 | exon | 85980079 | 85980297 | 85980079 | ID=MsG0680034341.01.T01:exon:13026;Parent=MsG0680034341.01.T01 |
| Chr6 | exon | 85979682 | 85979820 | 85979682 | ID=MsG0680034341.01.T01:exon:13025;Parent=MsG0680034341.01.T01 |
| Chr6 | exon | 85978971 | 85979144 | 85978971 | ID=MsG0680034341.01.T01:exon:13024;Parent=MsG0680034341.01.T01 |
| Chr6 | exon | 85978135 | 85978428 | 85978135 | ID=MsG0680034341.01.T01:exon:13023;Parent=MsG0680034341.01.T01 |
| Chr6 | CDS | 85980395 | 85980756 | 85980395 | ID=MsG0680034341.01.T01:cds;Parent=MsG0680034341.01.T01 |
| Chr6 | CDS | 85980079 | 85980297 | 85980079 | ID=MsG0680034341.01.T01:cds;Parent=MsG0680034341.01.T01 |
| Chr6 | CDS | 85979682 | 85979820 | 85979682 | ID=MsG0680034341.01.T01:cds;Parent=MsG0680034341.01.T01 |
| Chr6 | CDS | 85978971 | 85979144 | 85978971 | ID=MsG0680034341.01.T01:cds;Parent=MsG0680034341.01.T01 |
| Chr6 | CDS | 85978135 | 85978428 | 85978135 | ID=MsG0680034341.01.T01:cds;Parent=MsG0680034341.01.T01 |
| Gene Sequence |
| Protein sequence |
