Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034307.01.T01 | XP_004497487.1 | 72 | 525 | 145 | 1 | 1 | 523 | 1 | 525 | 0 | 811 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034307.01.T01 | B9SCB6 | 51.132 | 530 | 253 | 3 | 1 | 528 | 1 | 526 | 0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034307.01.T01 | A0A1S2Y0Q7 | 72.000 | 525 | 145 | 1 | 1 | 523 | 1 | 525 | 0.0 | 811 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0680034295.01 | MsG0680034307.01 | 0.804257 | 2.356139e-49 | 1.209141e-46 |
| MsG0680034298.01 | MsG0680034307.01 | 0.817177 | 3.774679e-52 | 2.729313e-49 |
| MsG0680034299.01 | MsG0680034307.01 | 0.817483 | 3.221554e-52 | 2.349080e-49 |
| MsG0680034306.01 | MsG0680034307.01 | 0.885702 | 6.471552e-72 | 4.487660e-68 |
| MsG0680034307.01 | MsG0680034312.01 | 0.809652 | 1.702230e-50 | 1.005167e-47 |
| MsG0680034307.01 | MsG0680034325.01 | 0.820773 | 5.744063e-53 | 4.587495e-50 |
| MsG0680034307.01 | MsG0680034326.01 | 0.830924 | 2.232505e-55 | 2.386113e-52 |
| MsG0680034307.01 | MsG0680034328.01 | 0.827178 | 1.805961e-54 | 1.730342e-51 |
| MsG0680034307.01 | MsG0680034329.01 | 0.836558 | 8.723344e-57 | 1.103203e-53 |
| MsG0680034307.01 | MsG0680034341.01 | 0.816205 | 6.235343e-52 | 4.390327e-49 |
| MsG0680034307.01 | MsG0680034348.01 | 0.851496 | 8.544063e-61 | 1.732651e-57 |
| MsG0680034307.01 | MsG0680034351.01 | 0.835765 | 1.386533e-56 | 1.712224e-53 |
| MsG0680034307.01 | MsG0680034352.01 | 0.837745 | 4.336246e-57 | 5.686819e-54 |
| MsG0680034307.01 | MsG0680034354.01 | 0.814837 | 1.256856e-51 | 8.524606e-49 |
| MsG0680034307.01 | MsG0680034356.01 | 0.801564 | 8.482222e-49 | 4.063698e-46 |
| MsG0680034307.01 | MsG0680034366.01 | 0.814452 | 1.529330e-51 | 1.026572e-48 |
| MsG0680034307.01 | MsG0680034367.01 | 0.805981 | 1.026841e-49 | 5.508967e-47 |
| MsG0680034307.01 | MsG0680034369.01 | 0.808255 | 3.387580e-50 | 1.927765e-47 |
| MsG0680034307.01 | MsG0880046273.01 | 0.803553 | 3.299232e-49 | 1.662946e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680034307.01 | MsG0880044118.01 | PPI |
| MsG0680034307.01 | MsG0280009520.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034307.01.T01 | MTR_5g062230 | 68.190 | 525 | 162 | 2 | 1 | 523 | 1 | 522 | 0.0 | 749 |
| MsG0680034307.01.T01 | MTR_6g008560 | 66.160 | 526 | 175 | 2 | 1 | 523 | 1 | 526 | 0.0 | 739 |
| MsG0680034307.01.T01 | MTR_6g039440 | 66.857 | 525 | 169 | 2 | 1 | 523 | 1 | 522 | 0.0 | 736 |
| MsG0680034307.01.T01 | MTR_3g464190 | 65.399 | 526 | 179 | 2 | 1 | 523 | 1 | 526 | 0.0 | 720 |
| MsG0680034307.01.T01 | MTR_4g048460 | 64.885 | 524 | 182 | 1 | 8 | 529 | 13 | 536 | 0.0 | 712 |
| MsG0680034307.01.T01 | MTR_5g073200 | 66.408 | 515 | 170 | 2 | 12 | 523 | 4 | 518 | 0.0 | 707 |
| MsG0680034307.01.T01 | MTR_5g094620 | 63.429 | 525 | 171 | 2 | 1 | 523 | 1 | 506 | 0.0 | 697 |
| MsG0680034307.01.T01 | MTR_5g073260 | 64.272 | 515 | 180 | 3 | 13 | 523 | 7 | 521 | 0.0 | 688 |
| MsG0680034307.01.T01 | MTR_4g081460 | 56.685 | 531 | 225 | 3 | 2 | 528 | 7 | 536 | 0.0 | 632 |
| MsG0680034307.01.T01 | MTR_4g048460 | 65.265 | 452 | 157 | 0 | 8 | 459 | 13 | 464 | 0.0 | 614 |
| MsG0680034307.01.T01 | MTR_6g008560 | 65.405 | 370 | 126 | 1 | 156 | 523 | 1 | 370 | 0.0 | 519 |
| MsG0680034307.01.T01 | MTR_2g081980 | 44.595 | 518 | 279 | 7 | 15 | 525 | 12 | 528 | 1.88e-162 | 473 |
| MsG0680034307.01.T01 | MTR_2g082010 | 43.738 | 519 | 286 | 5 | 13 | 526 | 23 | 540 | 3.89e-162 | 473 |
| MsG0680034307.01.T01 | MTR_8g007515 | 45.000 | 520 | 278 | 5 | 13 | 525 | 9 | 527 | 7.00e-162 | 472 |
| MsG0680034307.01.T01 | MTR_2g082060 | 41.699 | 518 | 283 | 7 | 15 | 525 | 19 | 524 | 8.12e-147 | 433 |
| MsG0680034307.01.T01 | MTR_4g019550 | 41.109 | 523 | 284 | 7 | 15 | 525 | 19 | 529 | 1.50e-135 | 404 |
| MsG0680034307.01.T01 | MTR_2g082050 | 37.988 | 487 | 241 | 8 | 43 | 525 | 1 | 430 | 1.05e-113 | 345 |
| MsG0680034307.01.T01 | MTR_4g045810 | 35.271 | 516 | 321 | 5 | 13 | 522 | 41 | 549 | 5.90e-108 | 334 |
| MsG0680034307.01.T01 | MTR_2g064425 | 37.282 | 515 | 309 | 9 | 17 | 526 | 53 | 558 | 1.87e-103 | 323 |
| MsG0680034307.01.T01 | MTR_2g089130 | 34.917 | 484 | 297 | 6 | 44 | 521 | 62 | 533 | 3.16e-98 | 308 |
| MsG0680034307.01.T01 | MTR_2g089120 | 35.000 | 480 | 293 | 7 | 49 | 521 | 67 | 534 | 2.17e-96 | 304 |
| MsG0680034307.01.T01 | MTR_8g057020 | 33.397 | 524 | 338 | 7 | 10 | 529 | 48 | 564 | 2.11e-95 | 302 |
| MsG0680034307.01.T01 | MTR_2g064425 | 35.534 | 515 | 303 | 10 | 17 | 526 | 53 | 543 | 1.15e-93 | 297 |
| MsG0680034307.01.T01 | MTR_2g065450 | 33.333 | 525 | 335 | 8 | 10 | 529 | 51 | 565 | 4.70e-90 | 288 |
| MsG0680034307.01.T01 | MTR_2g064425 | 42.541 | 362 | 198 | 6 | 17 | 376 | 53 | 406 | 5.82e-87 | 275 |
| MsG0680034307.01.T01 | MTR_4g092020 | 33.333 | 492 | 315 | 6 | 44 | 529 | 64 | 548 | 2.70e-85 | 275 |
| MsG0680034307.01.T01 | MTR_4g092010 | 31.902 | 489 | 308 | 8 | 55 | 529 | 61 | 538 | 9.09e-80 | 260 |
| MsG0680034307.01.T01 | MTR_7g010710 | 31.191 | 529 | 351 | 8 | 1 | 522 | 1 | 523 | 3.37e-79 | 258 |
| MsG0680034307.01.T01 | MTR_2g064425 | 40.055 | 362 | 192 | 7 | 17 | 376 | 53 | 391 | 3.21e-77 | 249 |
| MsG0680034307.01.T01 | MTR_5g094530 | 55.963 | 218 | 60 | 3 | 166 | 381 | 1 | 184 | 9.47e-73 | 229 |
| MsG0680034307.01.T01 | MTR_2g010960 | 29.940 | 501 | 326 | 9 | 47 | 530 | 9 | 501 | 8.28e-70 | 233 |
| MsG0680034307.01.T01 | MTR_6g064980 | 30.550 | 491 | 320 | 11 | 54 | 530 | 13 | 496 | 5.08e-68 | 228 |
| MsG0680034307.01.T01 | MTR_3g465090 | 30.533 | 488 | 324 | 9 | 54 | 530 | 13 | 496 | 1.26e-67 | 227 |
| MsG0680034307.01.T01 | MTR_3g063170 | 30.223 | 493 | 319 | 11 | 54 | 530 | 13 | 496 | 3.91e-67 | 226 |
| MsG0680034307.01.T01 | MTR_3g063120 | 29.707 | 478 | 315 | 10 | 68 | 530 | 1 | 472 | 5.06e-65 | 219 |
| MsG0680034307.01.T01 | MTR_3g063140 | 29.817 | 493 | 321 | 11 | 54 | 530 | 13 | 496 | 3.97e-64 | 218 |
| MsG0680034307.01.T01 | MTR_3g052120 | 29.835 | 486 | 330 | 9 | 54 | 530 | 13 | 496 | 5.87e-64 | 217 |
| MsG0680034307.01.T01 | MTR_7g057340 | 64.539 | 141 | 48 | 1 | 385 | 523 | 1 | 141 | 2.47e-63 | 204 |
| MsG0680034307.01.T01 | MTR_7g057390 | 64.748 | 139 | 48 | 1 | 385 | 523 | 1 | 138 | 1.34e-61 | 200 |
| MsG0680034307.01.T01 | MTR_7g050990 | 61.212 | 165 | 53 | 2 | 200 | 364 | 28 | 181 | 8.72e-58 | 207 |
| MsG0680034307.01.T01 | MTR_6g065040 | 29.925 | 401 | 258 | 9 | 145 | 530 | 2 | 394 | 1.58e-54 | 189 |
| MsG0680034307.01.T01 | MTR_3g063160 | 32.509 | 283 | 176 | 7 | 54 | 328 | 13 | 288 | 2.57e-35 | 134 |
| MsG0680034307.01.T01 | MTR_3g058160 | 27.400 | 427 | 268 | 13 | 67 | 461 | 59 | 475 | 2.83e-34 | 137 |
| MsG0680034307.01.T01 | MTR_3g058160 | 27.400 | 427 | 268 | 13 | 67 | 461 | 263 | 679 | 5.94e-34 | 137 |
| MsG0680034307.01.T01 | MTR_3g058160 | 27.400 | 427 | 268 | 13 | 67 | 461 | 250 | 666 | 6.00e-34 | 137 |
| MsG0680034307.01.T01 | MTR_3g058160 | 27.400 | 427 | 268 | 13 | 67 | 461 | 270 | 686 | 7.24e-34 | 137 |
| MsG0680034307.01.T01 | MTR_3g015080 | 47.482 | 139 | 37 | 2 | 385 | 523 | 1 | 103 | 7.27e-34 | 125 |
| MsG0680034307.01.T01 | MTR_2g064295 | 27.151 | 372 | 236 | 9 | 67 | 409 | 250 | 615 | 2.79e-33 | 135 |
| MsG0680034307.01.T01 | MTR_3g058160 | 26.562 | 448 | 266 | 14 | 67 | 461 | 270 | 707 | 3.05e-31 | 129 |
| MsG0680034307.01.T01 | MTR_2g012870 | 24.555 | 562 | 370 | 18 | 1 | 525 | 182 | 726 | 6.29e-30 | 125 |
| MsG0680034307.01.T01 | MTR_2g012900 | 23.925 | 535 | 341 | 21 | 1 | 485 | 182 | 700 | 6.81e-26 | 112 |
| MsG0680034307.01.T01 | MTR_7g094970 | 27.037 | 270 | 165 | 6 | 73 | 313 | 211 | 477 | 1.76e-22 | 102 |
| MsG0680034307.01.T01 | MTR_7g011663 | 30.855 | 269 | 154 | 7 | 73 | 310 | 349 | 616 | 2.83e-22 | 101 |
| MsG0680034307.01.T01 | MTR_5g030050 | 28.030 | 264 | 157 | 7 | 73 | 312 | 3 | 257 | 6.55e-20 | 90.9 |
| MsG0680034307.01.T01 | MTR_7g011770 | 27.946 | 297 | 182 | 8 | 67 | 332 | 236 | 531 | 2.57e-19 | 92.0 |
| MsG0680034307.01.T01 | MTR_5g081730 | 36.364 | 110 | 65 | 1 | 153 | 257 | 2 | 111 | 6.58e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034307.01.T01 | AT5G23960 | 38.330 | 527 | 309 | 7 | 13 | 530 | 3 | 522 | 7.65e-135 | 402 |
| MsG0680034307.01.T01 | AT5G23960 | 38.302 | 530 | 307 | 9 | 13 | 530 | 3 | 524 | 6.78e-134 | 400 |
| MsG0680034307.01.T01 | AT1G70080 | 36.842 | 532 | 324 | 8 | 8 | 529 | 57 | 586 | 1.15e-122 | 373 |
| MsG0680034307.01.T01 | AT3G14490 | 36.731 | 520 | 320 | 4 | 17 | 530 | 60 | 576 | 5.38e-117 | 358 |
| MsG0680034307.01.T01 | AT3G14520 | 36.275 | 510 | 313 | 6 | 22 | 523 | 68 | 573 | 9.23e-114 | 350 |
| MsG0680034307.01.T01 | AT1G31950 | 35.783 | 517 | 307 | 7 | 22 | 523 | 70 | 576 | 8.98e-112 | 345 |
| MsG0680034307.01.T01 | AT3G14540 | 36.542 | 509 | 313 | 5 | 22 | 523 | 65 | 570 | 3.10e-111 | 343 |
| MsG0680034307.01.T01 | AT1G31950 | 36.078 | 510 | 314 | 6 | 22 | 523 | 70 | 575 | 7.21e-111 | 342 |
| MsG0680034307.01.T01 | AT3G29410 | 35.078 | 516 | 319 | 6 | 17 | 523 | 64 | 572 | 7.43e-107 | 332 |
| MsG0680034307.01.T01 | AT3G32030 | 33.661 | 508 | 328 | 6 | 22 | 523 | 68 | 572 | 1.12e-104 | 326 |
| MsG0680034307.01.T01 | AT5G44630 | 35.067 | 519 | 324 | 9 | 18 | 526 | 14 | 529 | 4.18e-103 | 321 |
| MsG0680034307.01.T01 | AT4G20200 | 35.524 | 487 | 298 | 9 | 48 | 523 | 92 | 573 | 4.75e-103 | 322 |
| MsG0680034307.01.T01 | AT1G31950 | 36.285 | 463 | 270 | 6 | 22 | 469 | 70 | 522 | 5.57e-103 | 320 |
| MsG0680034307.01.T01 | AT4G20210 | 34.043 | 517 | 326 | 8 | 17 | 523 | 58 | 569 | 5.58e-103 | 322 |
| MsG0680034307.01.T01 | AT3G14540 | 37.303 | 445 | 272 | 3 | 22 | 462 | 65 | 506 | 3.54e-102 | 317 |
| MsG0680034307.01.T01 | AT1G33750 | 33.730 | 504 | 326 | 5 | 24 | 523 | 73 | 572 | 1.23e-101 | 318 |
| MsG0680034307.01.T01 | AT3G29410 | 35.608 | 469 | 296 | 4 | 59 | 523 | 1 | 467 | 1.40e-101 | 315 |
| MsG0680034307.01.T01 | AT4G13300 | 34.510 | 510 | 322 | 7 | 25 | 526 | 20 | 525 | 5.77e-101 | 315 |
| MsG0680034307.01.T01 | AT4G15870 | 34.563 | 515 | 309 | 11 | 25 | 528 | 75 | 572 | 3.50e-97 | 306 |
| MsG0680034307.01.T01 | AT4G13280 | 34.252 | 508 | 322 | 7 | 27 | 526 | 22 | 525 | 5.50e-97 | 305 |
| MsG0680034307.01.T01 | AT4G20230 | 33.951 | 486 | 307 | 8 | 48 | 523 | 104 | 585 | 4.18e-96 | 305 |
| MsG0680034307.01.T01 | AT4G20230 | 33.951 | 486 | 307 | 8 | 48 | 523 | 92 | 573 | 4.60e-96 | 304 |
| MsG0680034307.01.T01 | AT3G29190 | 32.787 | 488 | 310 | 8 | 48 | 523 | 89 | 570 | 4.97e-95 | 301 |
| MsG0680034307.01.T01 | AT3G29110 | 35.019 | 514 | 315 | 10 | 17 | 516 | 55 | 563 | 7.17e-95 | 301 |
| MsG0680034307.01.T01 | AT2G23230 | 33.714 | 525 | 331 | 10 | 16 | 528 | 55 | 574 | 1.77e-93 | 297 |
| MsG0680034307.01.T01 | AT2G23230 | 33.524 | 525 | 327 | 11 | 16 | 528 | 55 | 569 | 3.22e-91 | 291 |
| MsG0680034307.01.T01 | AT4G16730 | 32.755 | 519 | 325 | 10 | 28 | 529 | 2 | 513 | 1.15e-90 | 288 |
| MsG0680034307.01.T01 | AT1G66020 | 31.845 | 515 | 340 | 7 | 17 | 523 | 56 | 567 | 4.07e-88 | 283 |
| MsG0680034307.01.T01 | AT4G16730 | 33.404 | 473 | 293 | 8 | 73 | 529 | 1 | 467 | 2.18e-87 | 278 |
| MsG0680034307.01.T01 | AT1G48800 | 31.731 | 520 | 337 | 10 | 16 | 523 | 62 | 575 | 1.08e-85 | 277 |
| MsG0680034307.01.T01 | AT4G13280 | 33.268 | 508 | 297 | 9 | 27 | 526 | 22 | 495 | 3.35e-85 | 273 |
| MsG0680034307.01.T01 | AT1G61680 | 32.645 | 484 | 312 | 5 | 54 | 529 | 77 | 554 | 7.94e-85 | 274 |
| MsG0680034307.01.T01 | AT2G24210 | 31.648 | 534 | 343 | 12 | 10 | 529 | 39 | 564 | 9.96e-84 | 271 |
| MsG0680034307.01.T01 | AT4G16740 | 31.887 | 530 | 333 | 13 | 14 | 529 | 23 | 538 | 6.14e-83 | 268 |
| MsG0680034307.01.T01 | AT1G61680 | 32.231 | 484 | 307 | 6 | 54 | 529 | 77 | 547 | 4.25e-82 | 266 |
| MsG0680034307.01.T01 | AT1G48820 | 31.102 | 508 | 299 | 11 | 17 | 517 | 63 | 526 | 1.25e-78 | 257 |
| MsG0680034307.01.T01 | AT5G48110 | 38.141 | 312 | 187 | 5 | 215 | 523 | 1 | 309 | 3.18e-78 | 249 |
| MsG0680034307.01.T01 | AT3G25830 | 31.076 | 502 | 322 | 10 | 15 | 501 | 45 | 537 | 7.64e-77 | 253 |
| MsG0680034307.01.T01 | AT3G25820 | 31.076 | 502 | 322 | 10 | 15 | 501 | 45 | 537 | 7.64e-77 | 253 |
| MsG0680034307.01.T01 | AT3G25810 | 31.673 | 502 | 321 | 10 | 15 | 501 | 45 | 539 | 1.80e-74 | 247 |
| MsG0680034307.01.T01 | AT4G16740 | 34.037 | 379 | 229 | 8 | 14 | 381 | 23 | 391 | 8.43e-68 | 224 |
| MsG0680034307.01.T01 | AT1G66020 | 33.604 | 369 | 236 | 6 | 17 | 379 | 56 | 421 | 1.47e-64 | 216 |
| MsG0680034307.01.T01 | AT3G25820 | 31.783 | 387 | 243 | 8 | 15 | 389 | 45 | 422 | 2.43e-61 | 208 |
| MsG0680034307.01.T01 | AT4G16740 | 33.841 | 328 | 197 | 7 | 14 | 330 | 23 | 341 | 1.95e-56 | 193 |
| MsG0680034307.01.T01 | AT4G16740 | 33.841 | 328 | 197 | 7 | 14 | 330 | 23 | 341 | 1.95e-56 | 193 |
| MsG0680034307.01.T01 | AT3G25820 | 32.622 | 328 | 200 | 8 | 15 | 330 | 45 | 363 | 1.15e-52 | 184 |
| MsG0680034307.01.T01 | AT3G25820 | 32.622 | 328 | 200 | 8 | 15 | 330 | 45 | 363 | 1.15e-52 | 184 |
| MsG0680034307.01.T01 | AT1G79460 | 28.061 | 392 | 234 | 15 | 67 | 422 | 268 | 647 | 1.59e-27 | 117 |
| MsG0680034307.01.T01 | AT1G61120 | 24.353 | 464 | 316 | 9 | 71 | 511 | 289 | 740 | 2.06e-24 | 108 |
| MsG0680034307.01.T01 | AT4G02780 | 28.627 | 255 | 154 | 5 | 73 | 300 | 334 | 587 | 3.34e-21 | 98.2 |
Find 92 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCTTGCGGTGCTATTT+AGG | 0.102779 | 6:+85327861 | MsG0680034307.01.T01:CDS |
| TCTACTTGCATTGGCAAAAT+TGG | 0.119753 | 6:+85329367 | MsG0680034307.01.T01:CDS |
| TTCTCTTGCGGTGCTATTTA+GGG | 0.231146 | 6:+85327862 | MsG0680034307.01.T01:CDS |
| TCCTTATGCTTCGGAATCTA+TGG | 0.240904 | 6:+85327254 | MsG0680034307.01.T01:CDS |
| TTTCCTTGCTTGAGAATATT+GGG | 0.245853 | 6:-85329643 | None:intergenic |
| ATGCAAGTAGAATTTCATTA+TGG | 0.248221 | 6:-85329355 | None:intergenic |
| GTTTCCTTGCTTGAGAATAT+TGG | 0.266382 | 6:-85329644 | None:intergenic |
| TACAAGAGTTATGTTCAAAA+TGG | 0.269625 | 6:+85327812 | MsG0680034307.01.T01:CDS |
| CTGCTATACATTGCAGGCTT+AGG | 0.276774 | 6:+85331115 | MsG0680034307.01.T01:CDS |
| AGCCTGCATCAAAAGGAATT+TGG | 0.290423 | 6:+85329407 | MsG0680034307.01.T01:CDS |
| TTCTGGTCACCTTGAGTTGA+TGG | 0.298821 | 6:+85329211 | MsG0680034307.01.T01:CDS |
| AGACGAAATTAATCAAGTTT+TGG | 0.301364 | 6:+85327781 | MsG0680034307.01.T01:CDS |
| GTCATCAATGTATGATAAAA+TGG | 0.310334 | 6:-85329685 | None:intergenic |
| CAGATTTCCACCCTAGCGTT+TGG | 0.311610 | 6:+85327217 | MsG0680034307.01.T01:CDS |
| AGATTTCCACCCTAGCGTTT+GGG | 0.325288 | 6:+85327218 | MsG0680034307.01.T01:CDS |
| TGCAAAACCGATTTCTCATT+AGG | 0.335406 | 6:-85327183 | None:intergenic |
| TAATTGCTTGGAGGATCTTC+CGG | 0.335446 | 6:+85330035 | MsG0680034307.01.T01:CDS |
| TGAGGGAATATGATATGAAT+AGG | 0.340079 | 6:+85331315 | MsG0680034307.01.T01:CDS |
| TTCCTTGCTCGTCCTTGAAT+TGG | 0.345275 | 6:-85329079 | None:intergenic |
| GAGTAGTAGAATGTTGCTTT+TGG | 0.347068 | 6:+85329598 | MsG0680034307.01.T01:CDS |
| ATGCTGCTGCTATACATTGC+AGG | 0.354080 | 6:+85331109 | MsG0680034307.01.T01:CDS |
| TGTGCCGCAGTATTCATATC+AGG | 0.354426 | 6:-85327641 | None:intergenic |
| AGGACATGTTTCTTCGTACT+TGG | 0.361077 | 6:+85331283 | MsG0680034307.01.T01:CDS |
| CATCAATCCTAATGAGAAAT+CGG | 0.381109 | 6:+85327176 | MsG0680034307.01.T01:CDS |
| TGCAAGTAGAATTTCATTAT+GGG | 0.387262 | 6:-85329354 | None:intergenic |
| CGTACTTGGAATGTTATATG+AGG | 0.388936 | 6:+85331297 | MsG0680034307.01.T01:CDS |
| GGATGAATCTTGCTCATAGA+TGG | 0.390050 | 6:-85329333 | None:intergenic |
| GATTGACTCAATATGTCGTT+TGG | 0.390339 | 6:+85327739 | MsG0680034307.01.T01:CDS |
| CGACAAAAGACATCTTTGAT+TGG | 0.390521 | 6:+85331061 | MsG0680034307.01.T01:CDS |
| GTTGCTTTATAAATCACTCT+TGG | 0.404999 | 6:+85330068 | MsG0680034307.01.T01:CDS |
| TGCATGTACTCCTCTGTTGT+TGG | 0.418606 | 6:-85330970 | None:intergenic |
| TAAAGCAACTTCATGTAATC+CGG | 0.421098 | 6:-85330054 | None:intergenic |
| GACAAAAGACATCTTTGATT+GGG | 0.442878 | 6:+85331062 | MsG0680034307.01.T01:CDS |
| AAAAGAAAATTGACAACGCT+TGG | 0.444020 | 6:+85331360 | MsG0680034307.01.T01:CDS |
| TGCTATACATTGCAGGCTTA+GGG | 0.448464 | 6:+85331116 | MsG0680034307.01.T01:CDS |
| TAGGTGGGATATTAATTGCT+TGG | 0.452782 | 6:+85330023 | MsG0680034307.01.T01:intron |
| TACGACTTCTTACATTGGAA+TGG | 0.454510 | 6:+85331029 | MsG0680034307.01.T01:CDS |
| ATAGTTAGCATTCAGCCATC+TGG | 0.458951 | 6:-85330944 | None:intergenic |
| TAATGAAATTCTACTTGCAT+TGG | 0.460272 | 6:+85329358 | MsG0680034307.01.T01:CDS |
| ACGACTTCTTACATTGGAAT+GGG | 0.460983 | 6:+85331030 | MsG0680034307.01.T01:CDS |
| AATCAAGTTGACTTTATCCA+TGG | 0.461471 | 6:-85327720 | None:intergenic |
| GCTCCAAAGCCTGCATCAAA+AGG | 0.461740 | 6:+85329400 | MsG0680034307.01.T01:CDS |
| TCAATCTCTCGCGTTTATTG+AGG | 0.466310 | 6:+85331447 | MsG0680034307.01.T01:CDS |
| GATGACACATATGATGCATA+TGG | 0.467097 | 6:+85329702 | MsG0680034307.01.T01:CDS |
| ATTGACTCAATATGTCGTTT+GGG | 0.473862 | 6:+85327740 | MsG0680034307.01.T01:CDS |
| GAGGGAATATGATATGAATA+GGG | 0.475500 | 6:+85331316 | MsG0680034307.01.T01:CDS |
| TTGCAAGAGAAGGACTCAAT+CGG | 0.484754 | 6:-85329238 | None:intergenic |
| CGCTTGGAAAGATATAAATC+AGG | 0.490061 | 6:+85331376 | MsG0680034307.01.T01:CDS |
| ATATTGGGGCTCAAAATATA+CGG | 0.495144 | 6:-85329628 | None:intergenic |
| ACCATAGATTCCGAAGCATA+AGG | 0.502543 | 6:-85327255 | None:intergenic |
| TTGAGAACACACGTCAGAAT+AGG | 0.502783 | 6:-85331428 | None:intergenic |
| ATACAGGTGGTGGAAGGAGT+TGG | 0.512387 | 6:+85329542 | MsG0680034307.01.T01:intron |
| TAACTTCGTGCCACTAGCCT+AGG | 0.521919 | 6:-85329305 | None:intergenic |
| GCCTCACATATGATGGTTCA+TGG | 0.522278 | 6:+85329155 | MsG0680034307.01.T01:CDS |
| TAAGAAGTCGTAGCCAACAC+TGG | 0.522936 | 6:-85331018 | None:intergenic |
| AGATGCGTTCAACCAATTCA+AGG | 0.526513 | 6:+85329067 | MsG0680034307.01.T01:intron |
| CGGTGCTATTTAGGGTGTTG+AGG | 0.528058 | 6:+85327870 | MsG0680034307.01.T01:CDS |
| GTGGGATATTAATTGCTTGG+AGG | 0.529634 | 6:+85330026 | MsG0680034307.01.T01:CDS |
| TGGCCTCACTCATATAAGCT+TGG | 0.531321 | 6:-85330924 | None:intergenic |
| CATGGACTTTACGTTTCACC+AGG | 0.534178 | 6:+85327896 | MsG0680034307.01.T01:CDS |
| ATAGGTAACGGAACTTCAGT+TGG | 0.538099 | 6:-85331410 | None:intergenic |
| TTCCTTGCTTGAGAATATTG+GGG | 0.538442 | 6:-85329642 | None:intergenic |
| AAACAGTTTGAGCAGAAAAG+AGG | 0.539017 | 6:+85331263 | MsG0680034307.01.T01:intron |
| AACATTGGTCGTAGATGTTG+AGG | 0.541350 | 6:+85329112 | MsG0680034307.01.T01:CDS |
| TGCAAGAGAAGGACTCAATC+GGG | 0.546913 | 6:-85329237 | None:intergenic |
| AGCCCCAATATTCTCAAGCA+AGG | 0.547455 | 6:+85329640 | MsG0680034307.01.T01:CDS |
| CTTATATGAGTGAGGCCAGA+TGG | 0.549142 | 6:+85330929 | MsG0680034307.01.T01:CDS |
| ATCAAGTTGACTTTATCCAT+GGG | 0.549376 | 6:-85327719 | None:intergenic |
| TTTAGGGTGTTGAGGCAACA+TGG | 0.552007 | 6:+85327878 | MsG0680034307.01.T01:CDS |
| TTTACTTGTGTTGCAAGAGA+AGG | 0.558925 | 6:-85329248 | None:intergenic |
| GTACTTGGAATGTTATATGA+GGG | 0.567173 | 6:+85331298 | MsG0680034307.01.T01:CDS |
| GTATGAAGCCTCACATATGA+TGG | 0.567934 | 6:+85329148 | MsG0680034307.01.T01:CDS |
| ATCAAGTGGTTACCCAGTGT+TGG | 0.570889 | 6:+85331005 | MsG0680034307.01.T01:CDS |
| CTTTATATACAGGTGGTGGA+AGG | 0.574461 | 6:+85329536 | MsG0680034307.01.T01:intron |
| ATAGCACCGCAAGAGAATGA+AGG | 0.575242 | 6:-85327856 | None:intergenic |
| TTGGCTACGACTTCTTACAT+TGG | 0.586299 | 6:+85331024 | MsG0680034307.01.T01:CDS |
| AGGAAACTTCAGTGAAACAT+TGG | 0.587870 | 6:+85329097 | MsG0680034307.01.T01:CDS |
| AGACAACCTTCATTCTCTTG+CGG | 0.590250 | 6:+85327850 | MsG0680034307.01.T01:CDS |
| ACTACTCTATCTCGTGCATA+CGG | 0.590301 | 6:-85329582 | None:intergenic |
| ATCGGGTGGCCATCAACTCA+AGG | 0.590688 | 6:-85329220 | None:intergenic |
| CACATATCAACAATATCAAG+TGG | 0.594145 | 6:+85330991 | MsG0680034307.01.T01:CDS |
| GATTTCCACCCTAGCGTTTG+GGG | 0.596026 | 6:+85327219 | MsG0680034307.01.T01:CDS |
| AATCTCCCCAAACGCTAGGG+TGG | 0.601357 | 6:-85327224 | None:intergenic |
| AAGAAGTCGTAGCCAACACT+GGG | 0.613680 | 6:-85331017 | None:intergenic |
| AACCAATTCAAGGACGAGCA+AGG | 0.615624 | 6:+85329077 | MsG0680034307.01.T01:CDS |
| ACATTGGTCGTAGATGTTGA+GGG | 0.633793 | 6:+85329113 | MsG0680034307.01.T01:CDS |
| ACCATGAACCATCATATGTG+AGG | 0.634158 | 6:-85329156 | None:intergenic |
| AATCCAAGCTTATATGAGTG+AGG | 0.644710 | 6:+85330921 | MsG0680034307.01.T01:CDS |
| ACACACGTCAGAATAGGTAA+CGG | 0.688917 | 6:-85331422 | None:intergenic |
| AAGAGAAGGACTCAATCGGG+TGG | 0.695745 | 6:-85329234 | None:intergenic |
| GGAACCTGATATGAATACTG+CGG | 0.696636 | 6:+85327637 | MsG0680034307.01.T01:intron |
| TAACTATATACCAACAACAG+AGG | 0.703519 | 6:+85330960 | MsG0680034307.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAGACTATTTA+AGG | - | Chr6:85327363-85327382 | None:intergenic | 10.0% |
| !! | CATATAAAATAAATGTTAAT+AGG | - | Chr6:85330875-85330894 | None:intergenic | 10.0% |
| !! | GAAAAAAAATTACATAAAAT+AGG | + | Chr6:85328698-85328717 | MsG0680034307.01.T01:intron | 10.0% |
| !! | TGATTATAAAGTAATATTAA+TGG | + | Chr6:85328812-85328831 | MsG0680034307.01.T01:intron | 10.0% |
| !!! | AATTACATAGTTTTTTTTTT+TGG | + | Chr6:85330842-85330861 | MsG0680034307.01.T01:intron | 10.0% |
| !!! | AATTTCATTTAAATTTTTTG+TGG | + | Chr6:85330266-85330285 | MsG0680034307.01.T01:intron | 10.0% |
| !!! | CTATTAACATTTATTTTATA+TGG | + | Chr6:85330873-85330892 | MsG0680034307.01.T01:intron | 10.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | Chr6:85328506-85328525 | MsG0680034307.01.T01:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | Chr6:85328525-85328506 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | Chr6:85328507-85328526 | MsG0680034307.01.T01:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | Chr6:85328526-85328507 | None:intergenic | 15.0% |
| !! | ACAAATTGATAAACTAAAAA+AGG | + | Chr6:85327661-85327680 | MsG0680034307.01.T01:CDS | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | Chr6:85328284-85328303 | None:intergenic | 15.0% |
| !! | ATGAGTAAATAAATAGTATA+AGG | - | Chr6:85327498-85327517 | None:intergenic | 15.0% |
| !! | TAATATGAATGTCTAAAAAA+TGG | + | Chr6:85328629-85328648 | MsG0680034307.01.T01:intron | 15.0% |
| !! | TATAAAGACAAAAATAGTAT+AGG | - | Chr6:85329523-85329542 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | Chr6:85328415-85328434 | MsG0680034307.01.T01:intron | 15.0% |
| !!! | AAACATTTTTACATCATTTT+AGG | + | Chr6:85330367-85330386 | MsG0680034307.01.T01:intron | 15.0% |
| !!! | AATTGTTGTTTAATATTATG+TGG | + | Chr6:85329026-85329045 | MsG0680034307.01.T01:intron | 15.0% |
| !!! | CATTTTTTATGTTCTTAATT+TGG | + | Chr6:85327952-85327971 | MsG0680034307.01.T01:intron | 15.0% |
| !!! | TATTGTTTATCTTTAAAGTT+TGG | - | Chr6:85329817-85329836 | None:intergenic | 15.0% |
| !! | AAAAAAGGTTCTTACTTAAT+AGG | - | Chr6:85328852-85328871 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | Chr6:85328154-85328173 | None:intergenic | 20.0% |
| !! | AACTCAGTAAATAAAATTCA+TGG | - | Chr6:85330525-85330544 | None:intergenic | 20.0% |
| !! | AATTGATAAACTAAAAAAGG+AGG | + | Chr6:85327664-85327683 | MsG0680034307.01.T01:CDS | 20.0% |
| !! | ATATTATGAAAAGTGATTGA+AGG | + | Chr6:85327311-85327330 | MsG0680034307.01.T01:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | Chr6:85328155-85328174 | None:intergenic | 20.0% |
| !! | TATTATGAAAAGTGATTGAA+GGG | + | Chr6:85327312-85327331 | MsG0680034307.01.T01:intron | 20.0% |
| !! | TCGTAGAATTAATATTACAA+AGG | - | Chr6:85330747-85330766 | None:intergenic | 20.0% |
| !!! | AATCAAAATGATTTTTAGGT+GGG | + | Chr6:85330008-85330027 | MsG0680034307.01.T01:intron | 20.0% |
| !!! | AATTCTCTTTTTACTAAAAG+TGG | - | Chr6:85328659-85328678 | None:intergenic | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | Chr6:85328249-85328268 | None:intergenic | 20.0% |
| !!! | AATTTTTTGTGGTTATCAAA+TGG | + | Chr6:85330277-85330296 | MsG0680034307.01.T01:intron | 20.0% |
| !!! | ACGTAGTTAATATTGATTTT+AGG | - | Chr6:85328582-85328601 | None:intergenic | 20.0% |
| !!! | CGTAGTTAATATTGATTTTA+GGG | - | Chr6:85328581-85328600 | None:intergenic | 20.0% |
| !!! | CTATTTTTGTCTTTATATAC+AGG | + | Chr6:85329526-85329545 | MsG0680034307.01.T01:intron | 20.0% |
| !!! | TATCTTGACATTTTAATTTC+TGG | + | Chr6:85330773-85330792 | MsG0680034307.01.T01:intron | 20.0% |
| !!! | TGAATTAGAACTTTTTACTA+AGG | + | Chr6:85329734-85329753 | MsG0680034307.01.T01:CDS | 20.0% |
| !!! | TTGCAATCAAAATGATTTTT+AGG | + | Chr6:85330004-85330023 | MsG0680034307.01.T01:intron | 20.0% |
| ! | AAAGTCTAATCGTAAAATCA+AGG | + | Chr6:85328017-85328036 | MsG0680034307.01.T01:intron | 25.0% |
| ! | AAGAAAAATGTATCATCATG+AGG | + | Chr6:85330582-85330601 | MsG0680034307.01.T01:intron | 25.0% |
| ! | AAGTCTAATCGTAAAATCAA+GGG | + | Chr6:85328018-85328037 | MsG0680034307.01.T01:intron | 25.0% |
| ! | AATATATCCATCTTCAATCT+TGG | + | Chr6:85329890-85329909 | MsG0680034307.01.T01:intron | 25.0% |
| ! | AATATTAATGGCATACATGT+AGG | + | Chr6:85328824-85328843 | MsG0680034307.01.T01:intron | 25.0% |
| ! | AATTCTTTAAATCAACAGCA+AGG | + | Chr6:85327282-85327301 | MsG0680034307.01.T01:intron | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | Chr6:85328121-85328140 | None:intergenic | 25.0% |
| ! | ATGCAAGTAGAATTTCATTA+TGG | - | Chr6:85329358-85329377 | None:intergenic | 25.0% |
| ! | GAGAATAATTAAAAGAGATG+AGG | - | Chr6:85328751-85328770 | None:intergenic | 25.0% |
| ! | GTCATCAATGTATGATAAAA+TGG | - | Chr6:85329688-85329707 | None:intergenic | 25.0% |
| ! | TAATGAAATTCTACTTGCAT+TGG | + | Chr6:85329358-85329377 | MsG0680034307.01.T01:CDS | 25.0% |
| ! | TACAAGAGTTATGTTCAAAA+TGG | + | Chr6:85327812-85327831 | MsG0680034307.01.T01:CDS | 25.0% |
| ! | TAGCACATCATACAATATTA+TGG | + | Chr6:85329769-85329788 | MsG0680034307.01.T01:intron | 25.0% |
| ! | TGATTCTTTGAATAGAGTAA+TGG | + | Chr6:85329975-85329994 | MsG0680034307.01.T01:intron | 25.0% |
| ! | TGCAAGTAGAATTTCATTAT+GGG | - | Chr6:85329357-85329376 | None:intergenic | 25.0% |
| ! | TTCAATCAAATAACTTCATG+AGG | - | Chr6:85330443-85330462 | None:intergenic | 25.0% |
| !! | AGACGAAATTAATCAAGTTT+TGG | + | Chr6:85327781-85327800 | MsG0680034307.01.T01:CDS | 25.0% |
| !! | ATGACACTTAATTGTTGTTA+TGG | - | Chr6:85327572-85327591 | None:intergenic | 25.0% |
| !! | GTAATATTTGACTTTGTCAT+GGG | + | Chr6:85328600-85328619 | MsG0680034307.01.T01:intron | 25.0% |
| !! | TAAGTTGAGATATATATACC+TGG | - | Chr6:85327917-85327936 | None:intergenic | 25.0% |
| !! | TCTTTAATCTAGTTTAGAGT+TGG | + | Chr6:85329846-85329865 | MsG0680034307.01.T01:intron | 25.0% |
| !! | TTTTTACTAAGGCAATTGAA+AGG | + | Chr6:85329745-85329764 | MsG0680034307.01.T01:CDS | 25.0% |
| !! | TTTTTGTCTTTATATACAGG+TGG | + | Chr6:85329529-85329548 | MsG0680034307.01.T01:intron | 25.0% |
| !!! | AACTCTTACTTCTTTTAAGA+AGG | - | Chr6:85330154-85330173 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | Chr6:85328444-85328463 | MsG0680034307.01.T01:intron | 25.0% |
| !!! | ACTCTTACTTCTTTTAAGAA+GGG | - | Chr6:85330153-85330172 | None:intergenic | 25.0% |
| !!! | CAATCAAAATGATTTTTAGG+TGG | + | Chr6:85330007-85330026 | MsG0680034307.01.T01:intron | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | Chr6:85328443-85328462 | MsG0680034307.01.T01:intron | 25.0% |
| !!! | TACAAGGTTGCTATTTTATA+GGG | - | Chr6:85328061-85328080 | None:intergenic | 25.0% |
| !!! | TGTATGTTTTGAATACATAC+AGG | + | Chr6:85327616-85327635 | MsG0680034307.01.T01:intron | 25.0% |
| !!! | TTACAAGGTTGCTATTTTAT+AGG | - | Chr6:85328062-85328081 | None:intergenic | 25.0% |
| !!! | TTTTTTCATTCCTTATGCTT+CGG | + | Chr6:85327245-85327264 | MsG0680034307.01.T01:CDS | 25.0% |
| AAAAATATTGGAAGAGGCTT+TGG | + | Chr6:85329181-85329200 | MsG0680034307.01.T01:CDS | 30.0% | |
| AAAAGAAAATTGACAACGCT+TGG | + | Chr6:85331360-85331379 | MsG0680034307.01.T01:CDS | 30.0% | |
| AAACTGAGTTCATATAACCA+TGG | - | Chr6:85330681-85330700 | None:intergenic | 30.0% | |
| ATATTGGGGCTCAAAATATA+CGG | - | Chr6:85329631-85329650 | None:intergenic | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | Chr6:85328381-85328400 | None:intergenic | 30.0% | |
| CACATATCAACAATATCAAG+TGG | + | Chr6:85330991-85331010 | MsG0680034307.01.T01:CDS | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | - | Chr6:85328122-85328141 | None:intergenic | 30.0% | |
| CATCAATCCTAATGAGAAAT+CGG | + | Chr6:85327176-85327195 | MsG0680034307.01.T01:CDS | 30.0% | |
| GACAAAAGACATCTTTGATT+GGG | + | Chr6:85331062-85331081 | MsG0680034307.01.T01:CDS | 30.0% | |
| GAGGGAATATGATATGAATA+GGG | + | Chr6:85331316-85331335 | MsG0680034307.01.T01:CDS | 30.0% | |
| GGAATGAAACTTGATATTCT+AGG | + | Chr6:85327393-85327412 | MsG0680034307.01.T01:intron | 30.0% | |
| GGTTCATGGTGAAAAAATAT+TGG | + | Chr6:85329169-85329188 | MsG0680034307.01.T01:CDS | 30.0% | |
| GTACTTGGAATGTTATATGA+GGG | + | Chr6:85331298-85331317 | MsG0680034307.01.T01:CDS | 30.0% | |
| TAAAGCAACTTCATGTAATC+CGG | - | Chr6:85330057-85330076 | None:intergenic | 30.0% | |
| TAACTATATACCAACAACAG+AGG | + | Chr6:85330960-85330979 | MsG0680034307.01.T01:CDS | 30.0% | |
| TGAGGGAATATGATATGAAT+AGG | + | Chr6:85331315-85331334 | MsG0680034307.01.T01:CDS | 30.0% | |
| TGCAAAAAACTTATTGTCCA+TGG | + | Chr6:85330661-85330680 | MsG0680034307.01.T01:intron | 30.0% | |
| TGGTGAAAAAATATTGGAAG+AGG | + | Chr6:85329175-85329194 | MsG0680034307.01.T01:CDS | 30.0% | |
| TTTCCTTGCTTGAGAATATT+GGG | - | Chr6:85329646-85329665 | None:intergenic | 30.0% | |
| ! | AAAGTATCACCATAATCACT+TGG | + | Chr6:85330402-85330421 | MsG0680034307.01.T01:intron | 30.0% |
| ! | ATTGACTCAATATGTCGTTT+GGG | + | Chr6:85327740-85327759 | MsG0680034307.01.T01:CDS | 30.0% |
| ! | CGTAATATTTGACTTTGTCA+TGG | + | Chr6:85328599-85328618 | MsG0680034307.01.T01:intron | 30.0% |
| ! | GTTGCTTTATAAATCACTCT+TGG | + | Chr6:85330068-85330087 | MsG0680034307.01.T01:CDS | 30.0% |
| ! | TCATGAGGATACATTTTTCT+TGG | - | Chr6:85330428-85330447 | None:intergenic | 30.0% |
| ! | TGGTTGGTATTCAAATATGT+GGG | - | Chr6:85327438-85327457 | None:intergenic | 30.0% |
| ! | TTTCTTTTGGCATTCTTGAA+TGG | - | Chr6:85331348-85331367 | None:intergenic | 30.0% |
| !! | AAGCGTTGTCAATTTTCTTT+TGG | - | Chr6:85331361-85331380 | None:intergenic | 30.0% |
| !! | AATCAAGTTGACTTTATCCA+TGG | - | Chr6:85327723-85327742 | None:intergenic | 30.0% |
| !! | ATCAAGTTGACTTTATCCAT+GGG | - | Chr6:85327722-85327741 | None:intergenic | 30.0% |
| !! | CTCTTACTTCTTTTAAGAAG+GGG | - | Chr6:85330152-85330171 | None:intergenic | 30.0% |
| !! | GTGTTTCTGAAGTACAAAAA+AGG | - | Chr6:85328867-85328886 | None:intergenic | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | + | Chr6:85328538-85328557 | MsG0680034307.01.T01:intron | 30.0% |
| !! | TTACAAGGTCGCTATTTTAT+AGG | + | Chr6:85328537-85328556 | MsG0680034307.01.T01:intron | 30.0% |
| !!! | AGTAGTAGAATGTTGCTTTT+GGG | + | Chr6:85329599-85329618 | MsG0680034307.01.T01:CDS | 30.0% |
| AAACAGTTTGAGCAGAAAAG+AGG | + | Chr6:85331263-85331282 | MsG0680034307.01.T01:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | + | Chr6:85328522-85328541 | MsG0680034307.01.T01:intron | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | Chr6:85328541-85328522 | None:intergenic | 35.0% | |
| AATCCAAGCTTATATGAGTG+AGG | + | Chr6:85330921-85330940 | MsG0680034307.01.T01:CDS | 35.0% | |
| AATCCTGGGCTAATATTAAG+TGG | - | Chr6:85327458-85327477 | None:intergenic | 35.0% | |
| AATGAGAGTAACTTGAATCC+TGG | - | Chr6:85327473-85327492 | None:intergenic | 35.0% | |
| ACGACTTCTTACATTGGAAT+GGG | + | Chr6:85331030-85331049 | MsG0680034307.01.T01:CDS | 35.0% | |
| AGGAAACTTCAGTGAAACAT+TGG | + | Chr6:85329097-85329116 | MsG0680034307.01.T01:CDS | 35.0% | |
| ATGAGAGTAACTTGAATCCT+GGG | - | Chr6:85327472-85327491 | None:intergenic | 35.0% | |
| CGACAAAAGACATCTTTGAT+TGG | + | Chr6:85331061-85331080 | MsG0680034307.01.T01:CDS | 35.0% | |
| CGCTTGGAAAGATATAAATC+AGG | + | Chr6:85331376-85331395 | MsG0680034307.01.T01:CDS | 35.0% | |
| CGTACTTGGAATGTTATATG+AGG | + | Chr6:85331297-85331316 | MsG0680034307.01.T01:CDS | 35.0% | |
| GATGACACATATGATGCATA+TGG | + | Chr6:85329702-85329721 | MsG0680034307.01.T01:CDS | 35.0% | |
| GTTTCCTTGCTTGAGAATAT+TGG | - | Chr6:85329647-85329666 | None:intergenic | 35.0% | |
| TACGACTTCTTACATTGGAA+TGG | + | Chr6:85331029-85331048 | MsG0680034307.01.T01:CDS | 35.0% | |
| TAGGTGGGATATTAATTGCT+TGG | + | Chr6:85330023-85330042 | MsG0680034307.01.T01:intron | 35.0% | |
| TGTTGTTATGGATCAACCTA+TGG | - | Chr6:85327560-85327579 | None:intergenic | 35.0% | |
| TTCCTTGCTTGAGAATATTG+GGG | - | Chr6:85329645-85329664 | None:intergenic | 35.0% | |
| TTGTCTTTATATACAGGTGG+TGG | + | Chr6:85329532-85329551 | MsG0680034307.01.T01:intron | 35.0% | |
| TTTACTTGTGTTGCAAGAGA+AGG | - | Chr6:85329251-85329270 | None:intergenic | 35.0% | |
| ! | GATTGACTCAATATGTCGTT+TGG | + | Chr6:85327739-85327758 | MsG0680034307.01.T01:CDS | 35.0% |
| ! | GCAGCAGCATTAACAATTTT+TGG | - | Chr6:85331099-85331118 | None:intergenic | 35.0% |
| ! | GTGGTTGGTATTCAAATATG+TGG | - | Chr6:85327439-85327458 | None:intergenic | 35.0% |
| ! | TCTACTTGCATTGGCAAAAT+TGG | + | Chr6:85329367-85329386 | MsG0680034307.01.T01:CDS | 35.0% |
| ! | TGCAAAACCGATTTCTCATT+AGG | - | Chr6:85327186-85327205 | None:intergenic | 35.0% |
| ! | TTCCAAATTCCTTTTGATGC+AGG | - | Chr6:85329412-85329431 | None:intergenic | 35.0% |
| ! | TTTTCTTGGCCAAGTGATTA+TGG | - | Chr6:85330414-85330433 | None:intergenic | 35.0% |
| ! | TTTTGCTAAATGCAGTCCAT+AGG | + | Chr6:85327541-85327560 | MsG0680034307.01.T01:intron | 35.0% |
| !! | TTCTTTTAAGAAGGGGTCAA+GGG | - | Chr6:85330145-85330164 | None:intergenic | 35.0% |
| !!! | GAGTAGTAGAATGTTGCTTT+TGG | + | Chr6:85329598-85329617 | MsG0680034307.01.T01:CDS | 35.0% |
| AAAAAATCTCCCCAAACGCT+AGG | - | Chr6:85327231-85327250 | None:intergenic | 40.0% | |
| AAAAATCTCCCCAAACGCTA+GGG | - | Chr6:85327230-85327249 | None:intergenic | 40.0% | |
| AACATTGGTCGTAGATGTTG+AGG | + | Chr6:85329112-85329131 | MsG0680034307.01.T01:CDS | 40.0% | |
| ACACACGTCAGAATAGGTAA+CGG | - | Chr6:85331425-85331444 | None:intergenic | 40.0% | |
| ACATTGGTCGTAGATGTTGA+GGG | + | Chr6:85329113-85329132 | MsG0680034307.01.T01:CDS | 40.0% | |
| ACCATAGATTCCGAAGCATA+AGG | - | Chr6:85327258-85327277 | None:intergenic | 40.0% | |
| ACCATGAACCATCATATGTG+AGG | - | Chr6:85329159-85329178 | None:intergenic | 40.0% | |
| ACTACTCTATCTCGTGCATA+CGG | - | Chr6:85329585-85329604 | None:intergenic | 40.0% | |
| AGACAACCTTCATTCTCTTG+CGG | + | Chr6:85327850-85327869 | MsG0680034307.01.T01:CDS | 40.0% | |
| AGATGCGTTCAACCAATTCA+AGG | + | Chr6:85329067-85329086 | MsG0680034307.01.T01:intron | 40.0% | |
| AGCCTGCATCAAAAGGAATT+TGG | + | Chr6:85329407-85329426 | MsG0680034307.01.T01:CDS | 40.0% | |
| AGGACATGTTTCTTCGTACT+TGG | + | Chr6:85331283-85331302 | MsG0680034307.01.T01:CDS | 40.0% | |
| ATAGTTAGCATTCAGCCATC+TGG | - | Chr6:85330947-85330966 | None:intergenic | 40.0% | |
| CAACCACTTAATATTAGCCC+AGG | + | Chr6:85327452-85327471 | MsG0680034307.01.T01:intron | 40.0% | |
| CTCAAAAACAGAGAAACCCA+TGG | + | Chr6:85327703-85327722 | MsG0680034307.01.T01:CDS | 40.0% | |
| CTGGGCTAATATTAAGTGGT+TGG | - | Chr6:85327454-85327473 | None:intergenic | 40.0% | |
| GGAACCTGATATGAATACTG+CGG | + | Chr6:85327637-85327656 | MsG0680034307.01.T01:intron | 40.0% | |
| GGATGAATCTTGCTCATAGA+TGG | - | Chr6:85329336-85329355 | None:intergenic | 40.0% | |
| GTATGAAGCCTCACATATGA+TGG | + | Chr6:85329148-85329167 | MsG0680034307.01.T01:CDS | 40.0% | |
| GTGGGATATTAATTGCTTGG+AGG | + | Chr6:85330026-85330045 | MsG0680034307.01.T01:CDS | 40.0% | |
| TAATTGCTTGGAGGATCTTC+CGG | + | Chr6:85330035-85330054 | MsG0680034307.01.T01:CDS | 40.0% | |
| TCAATCTCTCGCGTTTATTG+AGG | + | Chr6:85331447-85331466 | MsG0680034307.01.T01:CDS | 40.0% | |
| TCCTTATGCTTCGGAATCTA+TGG | + | Chr6:85327254-85327273 | MsG0680034307.01.T01:CDS | 40.0% | |
| TGCTATACATTGCAGGCTTA+GGG | + | Chr6:85331116-85331135 | MsG0680034307.01.T01:CDS | 40.0% | |
| TTAGCGACCAAGATTGAAGA+TGG | - | Chr6:85329900-85329919 | None:intergenic | 40.0% | |
| TTGAGAACACACGTCAGAAT+AGG | - | Chr6:85331431-85331450 | None:intergenic | 40.0% | |
| TTGCAAGAGAAGGACTCAAT+CGG | - | Chr6:85329241-85329260 | None:intergenic | 40.0% | |
| TTGGCTACGACTTCTTACAT+TGG | + | Chr6:85331024-85331043 | MsG0680034307.01.T01:CDS | 40.0% | |
| ! | ATTCCTTTTGATGCAGGCTT+TGG | - | Chr6:85329406-85329425 | None:intergenic | 40.0% |
| !! | ATAGGTAACGGAACTTCAGT+TGG | - | Chr6:85331413-85331432 | None:intergenic | 40.0% |
| !! | ATTCTCTTGCGGTGCTATTT+AGG | + | Chr6:85327861-85327880 | MsG0680034307.01.T01:CDS | 40.0% |
| !! | CTTCTTTTAAGAAGGGGTCA+AGG | - | Chr6:85330146-85330165 | None:intergenic | 40.0% |
| !! | CTTTATATACAGGTGGTGGA+AGG | + | Chr6:85329536-85329555 | MsG0680034307.01.T01:intron | 40.0% |
| !! | TTCTCTTGCGGTGCTATTTA+GGG | + | Chr6:85327862-85327881 | MsG0680034307.01.T01:CDS | 40.0% |
| AACCAATTCAAGGACGAGCA+AGG | + | Chr6:85329077-85329096 | MsG0680034307.01.T01:CDS | 45.0% | |
| AAGAAGTCGTAGCCAACACT+GGG | - | Chr6:85331020-85331039 | None:intergenic | 45.0% | |
| AGATTTCCACCCTAGCGTTT+GGG | + | Chr6:85327218-85327237 | MsG0680034307.01.T01:CDS | 45.0% | |
| AGCCCCAATATTCTCAAGCA+AGG | + | Chr6:85329640-85329659 | MsG0680034307.01.T01:CDS | 45.0% | |
| ATAGCACCGCAAGAGAATGA+AGG | - | Chr6:85327859-85327878 | None:intergenic | 45.0% | |
| ATCAAGTGGTTACCCAGTGT+TGG | + | Chr6:85331005-85331024 | MsG0680034307.01.T01:CDS | 45.0% | |
| ATGCTGCTGCTATACATTGC+AGG | + | Chr6:85331109-85331128 | MsG0680034307.01.T01:CDS | 45.0% | |
| CAAAAACTTGCCTAGGCTAG+TGG | + | Chr6:85329295-85329314 | MsG0680034307.01.T01:CDS | 45.0% | |
| CATGGACTTTACGTTTCACC+AGG | + | Chr6:85327896-85327915 | MsG0680034307.01.T01:CDS | 45.0% | |
| CTGCTATACATTGCAGGCTT+AGG | + | Chr6:85331115-85331134 | MsG0680034307.01.T01:CDS | 45.0% | |
| CTTATATGAGTGAGGCCAGA+TGG | + | Chr6:85330929-85330948 | MsG0680034307.01.T01:CDS | 45.0% | |
| GCCTCACATATGATGGTTCA+TGG | + | Chr6:85329155-85329174 | MsG0680034307.01.T01:CDS | 45.0% | |
| TAAGAAGTCGTAGCCAACAC+TGG | - | Chr6:85331021-85331040 | None:intergenic | 45.0% | |
| TGCAAGAGAAGGACTCAATC+GGG | - | Chr6:85329240-85329259 | None:intergenic | 45.0% | |
| TGCATGTACTCCTCTGTTGT+TGG | - | Chr6:85330973-85330992 | None:intergenic | 45.0% | |
| TGGCCTCACTCATATAAGCT+TGG | - | Chr6:85330927-85330946 | None:intergenic | 45.0% | |
| TGTGCCGCAGTATTCATATC+AGG | - | Chr6:85327644-85327663 | None:intergenic | 45.0% | |
| TTCCTTGCTCGTCCTTGAAT+TGG | - | Chr6:85329082-85329101 | None:intergenic | 45.0% | |
| ! | CTAGCCTAGGCAAGTTTTTG+CGG | - | Chr6:85329295-85329314 | None:intergenic | 45.0% |
| !! | TTCTGGTCACCTTGAGTTGA+TGG | + | Chr6:85329211-85329230 | MsG0680034307.01.T01:CDS | 45.0% |
| !! | TTTAGGGTGTTGAGGCAACA+TGG | + | Chr6:85327878-85327897 | MsG0680034307.01.T01:CDS | 45.0% |
| !!! | GAGGCTTTGGCTTTTACTTC+TGG | + | Chr6:85329194-85329213 | MsG0680034307.01.T01:CDS | 45.0% |
| !!! | AAGTAAATTTTTTTTTTATA+GGG | + | Chr6:85328478-85328497 | MsG0680034307.01.T01:intron | 5.0% |
| !!! | ATTTTATAATAATAAAAGAT+AGG | + | Chr6:85328676-85328695 | MsG0680034307.01.T01:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTTAT+AGG | + | Chr6:85328477-85328496 | MsG0680034307.01.T01:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTATCTAT+AGG | + | Chr6:85327372-85327391 | MsG0680034307.01.T01:intron | 5.0% |
| AAGAGAAGGACTCAATCGGG+TGG | - | Chr6:85329237-85329256 | None:intergenic | 50.0% | |
| CAGATTTCCACCCTAGCGTT+TGG | + | Chr6:85327217-85327236 | MsG0680034307.01.T01:CDS | 50.0% | |
| CTCTCCGCAAAAACTTGCCT+AGG | + | Chr6:85329288-85329307 | MsG0680034307.01.T01:CDS | 50.0% | |
| GATTTCCACCCTAGCGTTTG+GGG | + | Chr6:85327219-85327238 | MsG0680034307.01.T01:CDS | 50.0% | |
| GCTCCAAAGCCTGCATCAAA+AGG | + | Chr6:85329400-85329419 | MsG0680034307.01.T01:CDS | 50.0% | |
| ! | TAACTTCGTGCCACTAGCCT+AGG | - | Chr6:85329308-85329327 | None:intergenic | 50.0% |
| !! | ATACAGGTGGTGGAAGGAGT+TGG | + | Chr6:85329542-85329561 | MsG0680034307.01.T01:intron | 50.0% |
| !! | CGGTGCTATTTAGGGTGTTG+AGG | + | Chr6:85327870-85327889 | MsG0680034307.01.T01:CDS | 50.0% |
| AATCTCCCCAAACGCTAGGG+TGG | - | Chr6:85327227-85327246 | None:intergenic | 55.0% | |
| ATCGGGTGGCCATCAACTCA+AGG | - | Chr6:85329223-85329242 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 85327159 | 85331490 | 85327159 | ID=MsG0680034307.01;Name=MsG0680034307.01 |
| Chr6 | mRNA | 85327159 | 85331490 | 85327159 | ID=MsG0680034307.01.T01;Parent=MsG0680034307.01;Name=MsG0680034307.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|7|0|530 |
| Chr6 | exon | 85327159 | 85327275 | 85327159 | ID=MsG0680034307.01.T01:exon:1325;Parent=MsG0680034307.01.T01 |
| Chr6 | exon | 85327638 | 85327917 | 85327638 | ID=MsG0680034307.01.T01:exon:1326;Parent=MsG0680034307.01.T01 |
| Chr6 | exon | 85329069 | 85329441 | 85329069 | ID=MsG0680034307.01.T01:exon:1327;Parent=MsG0680034307.01.T01 |
| Chr6 | exon | 85329548 | 85329766 | 85329548 | ID=MsG0680034307.01.T01:exon:1328;Parent=MsG0680034307.01.T01 |
| Chr6 | exon | 85330026 | 85330164 | 85330026 | ID=MsG0680034307.01.T01:exon:1329;Parent=MsG0680034307.01.T01 |
| Chr6 | exon | 85330910 | 85331152 | 85330910 | ID=MsG0680034307.01.T01:exon:1330;Parent=MsG0680034307.01.T01 |
| Chr6 | exon | 85331269 | 85331490 | 85331269 | ID=MsG0680034307.01.T01:exon:1331;Parent=MsG0680034307.01.T01 |
| Chr6 | CDS | 85327159 | 85327275 | 85327159 | ID=MsG0680034307.01.T01:cds;Parent=MsG0680034307.01.T01 |
| Chr6 | CDS | 85327638 | 85327917 | 85327638 | ID=MsG0680034307.01.T01:cds;Parent=MsG0680034307.01.T01 |
| Chr6 | CDS | 85329069 | 85329441 | 85329069 | ID=MsG0680034307.01.T01:cds;Parent=MsG0680034307.01.T01 |
| Chr6 | CDS | 85329548 | 85329766 | 85329548 | ID=MsG0680034307.01.T01:cds;Parent=MsG0680034307.01.T01 |
| Chr6 | CDS | 85330026 | 85330164 | 85330026 | ID=MsG0680034307.01.T01:cds;Parent=MsG0680034307.01.T01 |
| Chr6 | CDS | 85330910 | 85331152 | 85330910 | ID=MsG0680034307.01.T01:cds;Parent=MsG0680034307.01.T01 |
| Chr6 | CDS | 85331269 | 85331490 | 85331269 | ID=MsG0680034307.01.T01:cds;Parent=MsG0680034307.01.T01 |
| Gene Sequence |
| Protein sequence |
