AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680034760.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034760.01.T01 MTR_6g074880 97.660 470 11 0 8 477 1 470 0.0 954
MsG0680034760.01.T01 MTR_4g054630 82.906 468 79 1 9 476 1 467 0.0 811
MsG0680034760.01.T01 MTR_4g054415 83.568 426 70 0 51 476 1 426 0.0 759
MsG0680034760.01.T01 MTR_1g076430 63.972 433 155 1 45 477 77 508 0.0 588
MsG0680034760.01.T01 MTR_2g054940 60.480 458 175 2 20 477 56 507 0.0 573
MsG0680034760.01.T01 MTR_1g041085 59.283 474 187 4 5 477 46 514 0.0 570
MsG0680034760.01.T01 MTR_7g081695 58.278 453 171 3 20 472 56 490 0.0 537
MsG0680034760.01.T01 MTR_4g113280 59.353 433 164 2 45 477 65 485 0.0 526
MsG0680034760.01.T01 MTR_7g118170 57.381 420 175 3 59 475 110 528 8.51e-180 514
MsG0680034760.01.T01 MTR_4g070270 55.324 432 189 4 45 475 74 502 1.28e-174 500
MsG0680034760.01.T01 MTR_6g032965 57.963 383 160 1 91 473 1 382 4.17e-165 471
MsG0680034760.01.T01 MTR_1g110930 53.538 424 193 3 55 477 72 492 1.46e-158 459
MsG0680034760.01.T01 MTR_5g056510 50.214 468 225 5 13 477 30 492 1.43e-156 454
MsG0680034760.01.T01 MTR_3g105550 47.964 442 219 3 45 476 97 537 5.80e-151 441
MsG0680034760.01.T01 MTR_4g054260 76.654 257 43 1 220 476 87 326 7.75e-144 415
MsG0680034760.01.T01 MTR_2g013740 51.880 399 187 3 69 467 110 503 3.25e-136 402
MsG0680034760.01.T01 MTR_2g436480 47.356 435 222 5 43 475 22 451 6.96e-136 399
MsG0680034760.01.T01 MTR_2g007020 47.922 409 209 4 68 475 46 451 5.84e-133 392
MsG0680034760.01.T01 MTR_7g118160 48.086 418 170 6 63 476 46 420 8.04e-132 388
MsG0680034760.01.T01 MTR_1g102290 42.506 407 232 2 71 476 82 487 5.68e-111 337
MsG0680034760.01.T01 MTR_3g072940 44.226 407 218 6 71 473 82 483 2.52e-106 325
MsG0680034760.01.T01 MTR_3g072980 44.226 407 218 6 71 473 82 483 2.66e-106 325
MsG0680034760.01.T01 MTR_6g051440 44.146 410 214 9 71 473 81 482 8.41e-103 316
MsG0680034760.01.T01 MTR_1g115560 36.123 454 258 7 46 474 7 453 2.80e-100 309
MsG0680034760.01.T01 MTR_4g053905 83.750 160 26 0 317 476 1 160 2.19e-99 295
MsG0680034760.01.T01 MTR_4g062170 38.551 428 244 7 59 472 19 441 5.77e-98 303
MsG0680034760.01.T01 MTR_4g062190 37.079 445 237 9 53 472 16 442 1.14e-97 302
MsG0680034760.01.T01 MTR_4g062270 37.705 427 241 8 59 472 19 433 1.05e-95 297
MsG0680034760.01.T01 MTR_2g096210 38.393 448 243 11 46 472 9 444 4.95e-95 296
MsG0680034760.01.T01 MTR_4g054265 72.881 118 32 0 51 168 1 118 4.73e-58 187
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680034760.01.T01 AT1G04220 60.976 451 167 4 36 477 67 517 0.0 565
MsG0680034760.01.T01 AT2G26640 60.508 433 170 1 45 477 74 505 0.0 558
MsG0680034760.01.T01 AT5G43760 60.444 450 169 5 36 477 74 522 0.0 544
MsG0680034760.01.T01 AT1G01120 56.563 419 178 3 59 475 110 526 4.85e-176 504
MsG0680034760.01.T01 AT1G19440 54.630 432 194 2 45 476 86 515 2.86e-175 502
MsG0680034760.01.T01 AT4G34510 51.931 466 214 7 12 475 28 485 1.39e-170 489
MsG0680034760.01.T01 AT2G16280 55.769 416 180 4 61 475 98 510 7.01e-169 486
MsG0680034760.01.T01 AT2G15090 53.125 448 186 5 42 475 42 479 1.88e-162 468
MsG0680034760.01.T01 AT2G46720 51.852 432 205 2 47 476 36 466 4.79e-161 464
MsG0680034760.01.T01 AT4G34250 50.633 474 226 4 8 475 16 487 2.68e-159 461
MsG0680034760.01.T01 AT1G68530 50.433 462 225 3 14 473 30 489 5.83e-159 460
MsG0680034760.01.T01 AT4G34520 52.262 442 198 5 45 475 51 490 2.01e-157 456
MsG0680034760.01.T01 AT1G25450 51.357 442 211 3 34 473 45 484 4.31e-155 450
MsG0680034760.01.T01 AT3G10280 50.231 432 205 3 47 476 36 459 2.19e-152 442
MsG0680034760.01.T01 AT2G26250 46.405 459 209 4 51 473 91 548 1.28e-149 438
MsG0680034760.01.T01 AT1G71160 47.281 423 215 6 53 473 30 446 8.95e-140 410
MsG0680034760.01.T01 AT5G49070 44.875 439 230 4 43 475 23 455 1.78e-126 376
MsG0680034760.01.T01 AT3G52160 44.419 439 192 5 27 465 64 450 8.35e-124 369
MsG0680034760.01.T01 AT3G52160 46.995 366 162 2 100 465 4 337 7.60e-116 344
MsG0680034760.01.T01 AT1G07720 37.882 425 243 5 66 472 26 447 1.48e-99 307
MsG0680034760.01.T01 AT5G04530 38.129 417 247 5 63 472 25 437 2.43e-99 306
MsG0680034760.01.T01 AT1G07720 37.882 425 243 5 66 472 69 490 2.45e-99 308
MsG0680034760.01.T01 AT2G28630 37.500 424 245 6 66 472 26 446 2.13e-95 296
MsG0680034760.01.T01 AT2G28630 37.500 424 245 6 66 472 26 446 2.13e-95 296
MsG0680034760.01.T01 AT1G68530 46.729 321 168 2 14 332 30 349 1.88e-91 283
MsG0680034760.01.T01 AT5G49070 40.667 300 173 2 43 342 23 317 1.22e-67 219

Find 90 sgRNAs with CRISPR-Local

Find 277 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGGATTAATCTCCTTAAT+TGG 0.196771 6:+94097593 None:intergenic
TACTAGAGTTGAATAATATT+TGG 0.198908 6:+94100979 None:intergenic
GGAACATTTCTTTAGGTAAA+AGG 0.201389 6:+94100908 None:intergenic
GCTACATTAGTGCAAATATT+TGG 0.217824 6:+94100690 None:intergenic
GTGTACGAACAGTGTGTTTA+AGG 0.221086 6:+94098128 None:intergenic
TTGAGAAGGAGCACACTTTC+AGG 0.235298 6:+94097483 None:intergenic
ACTACTAAGGCATATGAATT+TGG 0.243104 6:+94098289 None:intergenic
AGGGAAATGTTACTAATAAT+TGG 0.274988 6:-94097396 MsG0680034760.01.T01:three_prime_UTR
AAGGAATGTTGATCCAATTA+AGG 0.276599 6:-94097606 MsG0680034760.01.T01:CDS
AATAATATTTGGATATTTAG+AGG 0.277865 6:+94100990 None:intergenic
TCCTTGCTACAAATGCTTCT+AGG 0.288873 6:+94100843 None:intergenic
TAGTTCTGTTTGGTATGTTT+TGG 0.299504 6:-94097729 MsG0680034760.01.T01:CDS
GGTTAATATAGATGCTATTA+AGG 0.305460 6:+94100929 None:intergenic
TTGTTTCATCTTCTTGTTGA+AGG 0.311382 6:+94098071 None:intergenic
AGATTTCCAAAAGAAAATTA+TGG 0.314792 6:-94100769 MsG0680034760.01.T01:CDS
TTCAATGTCATTCCTTTCCT+TGG 0.317777 6:-94101054 MsG0680034760.01.T01:CDS
AGGATTTGGCAAATTGCATT+TGG 0.324096 6:-94097668 MsG0680034760.01.T01:CDS
AGAATGACACTTTATAGATA+TGG 0.327915 6:-94097764 MsG0680034760.01.T01:CDS
TAGTTGTTTGGCAAGGTCTA+TGG 0.328914 6:+94100452 None:intergenic
GTGCTATAATTTAAGTGGTA+TGG 0.331933 6:-94100496 MsG0680034760.01.T01:CDS
TAAGAAAAGGTGATAGGATT+TGG 0.336101 6:-94097682 MsG0680034760.01.T01:CDS
CTGCTGTTTGGTGTGCATTA+AGG 0.342043 6:-94097625 MsG0680034760.01.T01:CDS
ATTATGGATAAATCTGGATT+TGG 0.347127 6:-94100753 MsG0680034760.01.T01:CDS
AAGAAAATTATGGATAAATC+TGG 0.356287 6:-94100759 MsG0680034760.01.T01:CDS
AGAGGGAAGTCTCCAATGAT+AGG 0.387492 6:+94101008 None:intergenic
CCTTGCCAAACAACTACTTC+AGG 0.388185 6:-94100445 MsG0680034760.01.T01:intron
AGTGGTATGGGTTGCAGTGC+TGG 0.389573 6:-94100483 MsG0680034760.01.T01:CDS
CTACAAATGCTTCTAGGAAA+AGG 0.391879 6:+94100849 None:intergenic
AGCCCACTCAAACTGACATT+AGG 0.400077 6:+94097441 None:intergenic
GGATTTGGCAAATTGCATTT+GGG 0.406203 6:-94097667 MsG0680034760.01.T01:CDS
TTCTATACCCTCCCTATCAT+TGG 0.409390 6:-94101020 MsG0680034760.01.T01:CDS
GCCCACTCAAACTGACATTA+GGG 0.414455 6:+94097442 None:intergenic
TCTAACCTGAAGTAGTTGTT+TGG 0.419061 6:+94100440 None:intergenic
GATGAAACAAACAAAATCAT+AGG 0.420386 6:-94098058 MsG0680034760.01.T01:CDS
GAAGGATAAGAAAAGGTGAT+AGG 0.422534 6:-94097688 MsG0680034760.01.T01:CDS
AAGTGCTTGGATTAAGTGAT+TGG 0.422554 6:-94097802 MsG0680034760.01.T01:CDS
TTTGATGCTTAAGTTTGTAA+TGG 0.423445 6:+94100523 None:intergenic
TGGCAAATTGCATTTGGGTC+TGG 0.425750 6:-94097662 MsG0680034760.01.T01:CDS
ATACTTCAAGTAGTTCTGTT+TGG 0.426004 6:-94097739 MsG0680034760.01.T01:CDS
CTATAAAGTGTCATTCTTGA+AGG 0.426145 6:+94097770 None:intergenic
TGTATTCATACTGGTGGAAA+AGG 0.430524 6:-94097845 MsG0680034760.01.T01:CDS
GGAATATTCAATAAGTTCTC+TGG 0.450708 6:+94100714 None:intergenic
TGCTATAATTTAAGTGGTAT+GGG 0.459739 6:-94100495 MsG0680034760.01.T01:CDS
TCAAAACATAGCTTAAAATC+AGG 0.483154 6:+94097875 None:intergenic
AATGATGTTAGTAATCTACT+TGG 0.485533 6:-94097532 MsG0680034760.01.T01:exon
ATAATGTGTTGTAGCATGTA+TGG 0.486254 6:-94097329 MsG0680034760.01.T01:three_prime_UTR
TTTGGCTTATTGTGAAGCTA+AGG 0.486312 6:-94097711 MsG0680034760.01.T01:CDS
TCCTAGAAGCATTTGTAGCA+AGG 0.489141 6:-94100844 MsG0680034760.01.T01:CDS
TTAAGTGTAACACTGCTGTT+TGG 0.491770 6:-94097637 MsG0680034760.01.T01:CDS
GATAGGGAGGGTATAGAACT+TGG 0.493861 6:+94101025 None:intergenic
TTCACCTTCTCTTAGTGCAA+TGG 0.495529 6:-94100553 MsG0680034760.01.T01:CDS
AAAGGACTAATGAATTCAGC+TGG 0.498610 6:-94098022 MsG0680034760.01.T01:CDS
TACTAGTATTATATCAATGA+TGG 0.500470 6:-94097364 MsG0680034760.01.T01:three_prime_UTR
TGAAAGTGTGCTCCTTCTCA+AGG 0.505529 6:-94097481 MsG0680034760.01.T01:three_prime_UTR
ATCTACTTGGATTGACATGA+TGG 0.506313 6:-94097519 MsG0680034760.01.T01:three_prime_UTR
ATCAACAGTGGATGGTACTT+AGG 0.508837 6:-94098253 MsG0680034760.01.T01:CDS
CACCCTAATGTCAGTTTGAG+TGG 0.513204 6:-94097444 MsG0680034760.01.T01:three_prime_UTR
ATAGGAATATCACTTTCAAA+AGG 0.516485 6:-94098040 MsG0680034760.01.T01:CDS
TCAAATTGTCTCTTTCGTGT+AGG 0.521354 6:-94098208 MsG0680034760.01.T01:CDS
GCTAAGGGAAGGATAAGAAA+AGG 0.523513 6:-94097695 MsG0680034760.01.T01:CDS
TGAAAACTTACTCATCATGT+TGG 0.527563 6:+94101073 None:intergenic
GTTGTAGCATGTATGGGAAA+TGG 0.528626 6:-94097322 MsG0680034760.01.T01:three_prime_UTR
ACATTAGTGCAAATATTTGG+TGG 0.534827 6:+94100693 None:intergenic
AATTGTCTCTTTCGTGTAGG+TGG 0.536293 6:-94098205 MsG0680034760.01.T01:CDS
ACCCTAATGTCAGTTTGAGT+GGG 0.542671 6:-94097443 MsG0680034760.01.T01:three_prime_UTR
TTGACATGATGGTATTGACT+TGG 0.558679 6:-94097508 MsG0680034760.01.T01:three_prime_UTR
GAGGGAAGTCTCCAATGATA+GGG 0.559322 6:+94101009 None:intergenic
CAATTAAGGAGATTAATCCT+TGG 0.560390 6:-94097592 MsG0680034760.01.T01:CDS
ATAATATTTGGATATTTAGA+GGG 0.563220 6:+94100991 None:intergenic
ACAGCAAACATCACAACACT+TGG 0.570712 6:-94097989 MsG0680034760.01.T01:CDS
TTGGCTTATTGTGAAGCTAA+GGG 0.583938 6:-94097710 MsG0680034760.01.T01:CDS
ACTTGGATTGAGCCAAGGAA+AGG 0.589292 6:+94101042 None:intergenic
TTTATAGAAACATCAAGATG+TGG 0.590538 6:-94100816 MsG0680034760.01.T01:CDS
TAATGTGTTGTAGCATGTAT+GGG 0.593736 6:-94097328 MsG0680034760.01.T01:three_prime_UTR
CAGAAAACATCAACAGTGGA+TGG 0.597433 6:-94098261 MsG0680034760.01.T01:CDS
GATTAATCCTTGGAGTGATG+AGG 0.604473 6:-94097582 MsG0680034760.01.T01:CDS
CACACTGTTCGTACACACAA+AGG 0.607201 6:-94098121 MsG0680034760.01.T01:CDS
CCTGAAGTAGTTGTTTGGCA+AGG 0.616081 6:+94100445 None:intergenic
ATAGAACTTGGATTGAGCCA+AGG 0.617298 6:+94101037 None:intergenic
ATAACCATTGCACTAAGAGA+AGG 0.617915 6:+94100549 None:intergenic
CTTATTGTGAAGCTAAGGGA+AGG 0.621666 6:-94097706 MsG0680034760.01.T01:CDS
TGACATGATGGTATTGACTT+GGG 0.622301 6:-94097507 MsG0680034760.01.T01:three_prime_UTR
GGAAGTCTCCAATGATAGGG+AGG 0.622539 6:+94101012 None:intergenic
TCATGAACCTCATCACTCCA+AGG 0.627971 6:+94097575 None:intergenic
ATAGAAACATCAAGATGTGG+AGG 0.648261 6:-94100813 MsG0680034760.01.T01:CDS
ATATTTGCACTAATGTAGCA+AGG 0.656162 6:-94100686 MsG0680034760.01.T01:CDS
GAAGTCTCCAATGATAGGGA+GGG 0.664880 6:+94101013 None:intergenic
AGCACAGAAAACATCAACAG+TGG 0.678475 6:-94098265 MsG0680034760.01.T01:CDS
ATTGCACTAAGAGAAGGTGA+AGG 0.684147 6:+94100555 None:intergenic
TGTAGCAAGGAAAGAAACCG+AGG 0.707275 6:-94100673 MsG0680034760.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATTTAAAATAAAAAT+AGG - Chr6:94098715-94098734 MsG0680034760.01.T01:intron 0.0%
!! AATTTACTTAATTTATTATC+GGG - Chr6:94098831-94098850 MsG0680034760.01.T01:intron 10.0%
!! ATTATTTCAAATATTAGATT+AGG - Chr6:94098332-94098351 MsG0680034760.01.T01:intron 10.0%
!! TACTTAACAAAAAAAATAAA+AGG + Chr6:94099131-94099150 None:intergenic 10.0%
!! TTAACTTCTTAAAAAAAAAA+GGG - Chr6:94100936-94100955 MsG0680034760.01.T01:CDS 10.0%
!!! AATAACAATCAATTTTAATT+TGG + Chr6:94098091-94098110 None:intergenic 10.0%
!!! TTTAACTTCTTAAAAAAAAA+AGG - Chr6:94100935-94100954 MsG0680034760.01.T01:CDS 10.0%
!! AATAATATTTGGATATTTAG+AGG + Chr6:94097364-94097383 None:intergenic 15.0%
!! ATAAAAATAGGTTATTATTG+AGG - Chr6:94098727-94098746 MsG0680034760.01.T01:intron 15.0%
!! ATAATATTTGGATATTTAGA+GGG + Chr6:94097363-94097382 None:intergenic 15.0%
!! ATGGAATTAAAAATAAACAA+AGG + Chr6:94100018-94100037 None:intergenic 15.0%
!!! AGTAGCTAAATATATTTTAT+TGG + Chr6:94099670-94099689 None:intergenic 15.0%
!!! ATCTACTAGATATATATTTT+TGG + Chr6:94097467-94097486 None:intergenic 15.0%
!!! ATTTATCCATAATTTTCTTT+TGG + Chr6:94097591-94097610 None:intergenic 15.0%
!!! ATTTGAAATAATATCATCAT+AGG + Chr6:94098324-94098343 None:intergenic 15.0%
!!! GTAGCTAAATATATTTTATT+GGG + Chr6:94099669-94099688 None:intergenic 15.0%
!!! TAGCTAAATATATTTTATTG+GGG + Chr6:94099668-94099687 None:intergenic 15.0%
!!! TATTTTAATTGTTCTAGTAA+AGG + Chr6:94100401-94100420 None:intergenic 15.0%
!! AAAATAAACAAAGGATAGAT+AGG + Chr6:94100009-94100028 None:intergenic 20.0%
!! AAATAAATTCAAAACTCCAT+GGG + Chr6:94098510-94098529 None:intergenic 20.0%
!! AAGAAAATTATGGATAAATC+TGG - Chr6:94097592-94097611 MsG0680034760.01.T01:CDS 20.0%
!! ACATACATTGTTATATGTAT+AGG + Chr6:94099239-94099258 None:intergenic 20.0%
!! AGATTTCCAAAAGAAAATTA+TGG - Chr6:94097582-94097601 MsG0680034760.01.T01:CDS 20.0%
!! ATAATATTGGAAAAATACAC+TGG - Chr6:94098052-94098071 MsG0680034760.01.T01:CDS 20.0%
!! ATTAGATTAGGATTAGATTA+GGG - Chr6:94098344-94098363 MsG0680034760.01.T01:intron 20.0%
!! CATATCTTATTACTTAAAGT+TGG + Chr6:94098791-94098810 None:intergenic 20.0%
!! CCTATATACATATGAAAATA+TGG + Chr6:94100037-94100056 None:intergenic 20.0%
!! GTTTATCTATAAGAAACAAA+AGG + Chr6:94099295-94099314 None:intergenic 20.0%
!! TAAATAAATTCAAAACTCCA+TGG + Chr6:94098511-94098530 None:intergenic 20.0%
!! TAATTATGGGAAATCATTTA+TGG + Chr6:94099406-94099425 None:intergenic 20.0%
!! TACTAGAGTTGAATAATATT+TGG + Chr6:94097375-94097394 None:intergenic 20.0%
!! TACTAGTATTATATCAATGA+TGG - Chr6:94100987-94101006 MsG0680034760.01.T01:CDS 20.0%
!! TATTAGATTAGGATTAGATT+AGG - Chr6:94098343-94098362 MsG0680034760.01.T01:intron 20.0%
!! TTATTAAAATATTACTGGTG+TGG + Chr6:94099501-94099520 None:intergenic 20.0%
!! TTGAATATAATCATATGTGT+TGG - Chr6:94099531-94099550 MsG0680034760.01.T01:intron 20.0%
!! TTTAGACAAATAATCTCATT+TGG + Chr6:94099693-94099712 None:intergenic 20.0%
!!! AATTTTGAGTGGATTATATA+TGG + Chr6:94098592-94098611 None:intergenic 20.0%
!!! ACATTTTTTCACTTTTACTA+TGG - Chr6:94097395-94097414 MsG0680034760.01.T01:three_prime_UTR 20.0%
!!! ATGATTTATGAAATTTTGAG+TGG + Chr6:94098603-94098622 None:intergenic 20.0%
!!! ATTTTGTGCTATAATTTAAG+TGG - Chr6:94097850-94097869 MsG0680034760.01.T01:CDS 20.0%
!!! CCATATTTTCATATGTATAT+AGG - Chr6:94100034-94100053 MsG0680034760.01.T01:intron 20.0%
!!! CTTTTTTAAAGAGAATAAGT+GGG - Chr6:94099191-94099210 MsG0680034760.01.T01:intron 20.0%
!!! GTTTAAAAGTTGAAGTTTTT+TGG + Chr6:94098567-94098586 None:intergenic 20.0%
!!! TATTTTTGGAACATTTCTTT+AGG + Chr6:94097453-94097472 None:intergenic 20.0%
!!! TTTTTTAAAGAGAATAAGTG+GGG - Chr6:94099192-94099211 MsG0680034760.01.T01:intron 20.0%
! AAATTAAGTATGGAGGAAAA+TGG + Chr6:94099986-94100005 None:intergenic 25.0%
! AATACCAGTGGTATTAATTA+TGG + Chr6:94099420-94099439 None:intergenic 25.0%
! AATGATGTTAGTAATCTACT+TGG - Chr6:94100819-94100838 MsG0680034760.01.T01:CDS 25.0%
! AATTTAATGCAGCTACTATA+AGG + Chr6:94098005-94098024 None:intergenic 25.0%
! ACTTAATTTATTATCGGGTA+TGG - Chr6:94098836-94098855 MsG0680034760.01.T01:intron 25.0%
! AGAATGACACTTTATAGATA+TGG - Chr6:94100587-94100606 MsG0680034760.01.T01:CDS 25.0%
! AGGGAAATGTTACTAATAAT+TGG - Chr6:94100955-94100974 MsG0680034760.01.T01:CDS 25.0%
! ATACCAGTGGTATTAATTAT+GGG + Chr6:94099419-94099438 None:intergenic 25.0%
! ATAGGAATATCACTTTCAAA+AGG - Chr6:94100311-94100330 MsG0680034760.01.T01:intron 25.0%
! ATTATGGATAAATCTGGATT+TGG - Chr6:94097598-94097617 MsG0680034760.01.T01:CDS 25.0%
! CTATTTGACAAAAACACATT+TGG - Chr6:94099095-94099114 MsG0680034760.01.T01:intron 25.0%
! CTTAATTTATTATCGGGTAT+GGG - Chr6:94098837-94098856 MsG0680034760.01.T01:intron 25.0%
! GATAGATAGGAAATTAAGTA+TGG + Chr6:94099996-94100015 None:intergenic 25.0%
! GATGAAACAAACAAAATCAT+AGG - Chr6:94100293-94100312 MsG0680034760.01.T01:intron 25.0%
! GCGAGTTTACAAAATAATAT+TGG - Chr6:94098039-94098058 MsG0680034760.01.T01:CDS 25.0%
! GGTTAATATAGATGCTATTA+AGG + Chr6:94097425-94097444 None:intergenic 25.0%
! TAATGTTTCATGAGTTATCT+AGG + Chr6:94099343-94099362 None:intergenic 25.0%
! TCAAAACATAGCTTAAAATC+AGG + Chr6:94100479-94100498 None:intergenic 25.0%
! TGCTATAATTTAAGTGGTAT+GGG - Chr6:94097856-94097875 MsG0680034760.01.T01:CDS 25.0%
! TTTATAGAAACATCAAGATG+TGG - Chr6:94097535-94097554 MsG0680034760.01.T01:exon 25.0%
! TTTGACTACCCATTATTATA+TGG + Chr6:94098902-94098921 None:intergenic 25.0%
! TTTGATGCTTAAGTTTGTAA+TGG + Chr6:94097831-94097850 None:intergenic 25.0%
! TTTGTTGAAGACAAAAATGA+AGG - Chr6:94097729-94097748 MsG0680034760.01.T01:CDS 25.0%
!! ATGTGTCAATATTCGTATTT+TGG + Chr6:94099478-94099497 None:intergenic 25.0%
!! CCACTTATTCTCTTTAAAAA+AGG + Chr6:94099193-94099212 None:intergenic 25.0%
!! CGGTAAAATTTTCTTCAATA+AGG - Chr6:94098763-94098782 MsG0680034760.01.T01:intron 25.0%
!! GGTTATTATTGAGGATTTTT+AGG - Chr6:94098736-94098755 MsG0680034760.01.T01:intron 25.0%
!!! AGGTTTTACATTTAAAGCAT+AGG + Chr6:94099323-94099342 None:intergenic 25.0%
!!! ATTATTGAGGATTTTTAGGT+GGG - Chr6:94098740-94098759 MsG0680034760.01.T01:intron 25.0%
!!! CCTTTTTTAAAGAGAATAAG+TGG - Chr6:94099190-94099209 MsG0680034760.01.T01:intron 25.0%
!!! CTATGATCTTACTTTTTGTT+TGG - Chr6:94097961-94097980 MsG0680034760.01.T01:CDS 25.0%
!!! CTCATGGTTTTTTATGATTA+TGG - Chr6:94098134-94098153 MsG0680034760.01.T01:CDS 25.0%
!!! CTCATTTTTACTGTATAAGT+CGG - Chr6:94098224-94098243 MsG0680034760.01.T01:CDS 25.0%
!!! GTTTAAGGAGATATTTTGAA+CGG + Chr6:94100211-94100230 None:intergenic 25.0%
!!! TATTATTGAGGATTTTTAGG+TGG - Chr6:94098739-94098758 MsG0680034760.01.T01:intron 25.0%
!!! TTTTTTGTTAAGTAGTCTAG+CGG - Chr6:94099137-94099156 MsG0680034760.01.T01:intron 25.0%
AAATAGTACTACTGTGTTCT+GGG + Chr6:94099081-94099100 None:intergenic 30.0%
AAGGAATGTTGATCCAATTA+AGG - Chr6:94100745-94100764 MsG0680034760.01.T01:CDS 30.0%
ACATTAGTGCAAATATTTGG+TGG + Chr6:94097661-94097680 None:intergenic 30.0%
ACTACTAAGGCATATGAATT+TGG + Chr6:94100065-94100084 None:intergenic 30.0%
AGATAGGAAATTAAGTATGG+AGG + Chr6:94099993-94100012 None:intergenic 30.0%
ATAAATTCATCCATGTCTCA+TGG - Chr6:94098118-94098137 MsG0680034760.01.T01:CDS 30.0%
ATAATGTGTTGTAGCATGTA+TGG - Chr6:94101022-94101041 MsG0680034760.01.T01:CDS 30.0%
ATATTTGCACTAATGTAGCA+AGG - Chr6:94097665-94097684 MsG0680034760.01.T01:CDS 30.0%
ATTGTTATATGTATAGGCTG+AGG + Chr6:94099233-94099252 None:intergenic 30.0%
CAAGGATTAATCTCCTTAAT+TGG + Chr6:94100761-94100780 None:intergenic 30.0%
CAATTAAGGAGATTAATCCT+TGG - Chr6:94100759-94100778 MsG0680034760.01.T01:CDS 30.0%
GATTCAAAGAAAAATACCAG+TGG + Chr6:94099432-94099451 None:intergenic 30.0%
GCTACATTAGTGCAAATATT+TGG + Chr6:94097664-94097683 None:intergenic 30.0%
GGAACATTTCTTTAGGTAAA+AGG + Chr6:94097446-94097465 None:intergenic 30.0%
GGAATATTCAATAAGTTCTC+TGG + Chr6:94097640-94097659 None:intergenic 30.0%
GTCTGTGTCCATATAATAAT+GGG - Chr6:94098891-94098910 MsG0680034760.01.T01:intron 30.0%
GTGCTATAATTTAAGTGGTA+TGG - Chr6:94097855-94097874 MsG0680034760.01.T01:CDS 30.0%
TAAGAAAAGGTGATAGGATT+TGG - Chr6:94100669-94100688 MsG0680034760.01.T01:CDS 30.0%
TAATGTGTTGTAGCATGTAT+GGG - Chr6:94101023-94101042 MsG0680034760.01.T01:CDS 30.0%
TCATAAAAAACCATGAGACA+TGG + Chr6:94098131-94098150 None:intergenic 30.0%
TGAAAACTTACTCATCATGT+TGG + Chr6:94097281-94097300 None:intergenic 30.0%
TGTCTGTGTCCATATAATAA+TGG - Chr6:94098890-94098909 MsG0680034760.01.T01:intron 30.0%
TTATTATATGGACACAGACA+CGG + Chr6:94098890-94098909 None:intergenic 30.0%
TTGTTTCATCTTCTTGTTGA+AGG + Chr6:94100283-94100302 None:intergenic 30.0%
TTTCCCATAATTAATACCAC+TGG - Chr6:94099413-94099432 MsG0680034760.01.T01:intron 30.0%
! ACAAAAACACATTTGGTAGT+GGG - Chr6:94099102-94099121 MsG0680034760.01.T01:intron 30.0%
! ATACTTCAAGTAGTTCTGTT+TGG - Chr6:94100612-94100631 MsG0680034760.01.T01:CDS 30.0%
! ATCATTTATGGAGCATTCAT+TGG + Chr6:94099394-94099413 None:intergenic 30.0%
! CATTTTTGTATTCATACTGG+TGG - Chr6:94100500-94100519 MsG0680034760.01.T01:CDS 30.0%
! CTATAAAGTGTCATTCTTGA+AGG + Chr6:94100584-94100603 None:intergenic 30.0%
! GAGCATTTTTGTATTCATAC+TGG - Chr6:94100497-94100516 MsG0680034760.01.T01:CDS 30.0%
! GTTTTATGATGTGAATGAAG+TGG - Chr6:94098665-94098684 MsG0680034760.01.T01:intron 30.0%
!! TAGTTCTGTTTGGTATGTTT+TGG - Chr6:94100622-94100641 MsG0680034760.01.T01:CDS 30.0%
!!! CATCATTTTGAAACATCAAC+AGG + Chr6:94100806-94100825 None:intergenic 30.0%
AAAGGACTAATGAATTCAGC+TGG - Chr6:94100329-94100348 MsG0680034760.01.T01:intron 35.0%
AAGTGCTTGGATTAAGTGAT+TGG - Chr6:94100549-94100568 MsG0680034760.01.T01:CDS 35.0%
AGGATTTGGCAAATTGCATT+TGG - Chr6:94100683-94100702 MsG0680034760.01.T01:CDS 35.0%
ATAACCATTGCACTAAGAGA+AGG + Chr6:94097805-94097824 None:intergenic 35.0%
ATAGAAACATCAAGATGTGG+AGG - Chr6:94097538-94097557 MsG0680034760.01.T01:exon 35.0%
ATCTACTTGGATTGACATGA+TGG - Chr6:94100832-94100851 MsG0680034760.01.T01:CDS 35.0%
CAAATAGTACTACTGTGTTC+TGG + Chr6:94099082-94099101 None:intergenic 35.0%
CATTCGTACATCTAATCTAG+GGG + Chr6:94099024-94099043 None:intergenic 35.0%
CGGGTATCATATTTATCCAA+CGG + Chr6:94098419-94098438 None:intergenic 35.0%
GAAGACAAAAATGAAGGTTG+AGG - Chr6:94097735-94097754 MsG0680034760.01.T01:CDS 35.0%
GAAGGATAAGAAAAGGTGAT+AGG - Chr6:94100663-94100682 MsG0680034760.01.T01:CDS 35.0%
GACAAAAACACATTTGGTAG+TGG - Chr6:94099101-94099120 MsG0680034760.01.T01:intron 35.0%
GATTAGATTAGGGATGTCAA+TGG - Chr6:94098354-94098373 MsG0680034760.01.T01:intron 35.0%
GCATTCGTACATCTAATCTA+GGG + Chr6:94099025-94099044 None:intergenic 35.0%
GGATTTGGCAAATTGCATTT+GGG - Chr6:94100684-94100703 MsG0680034760.01.T01:CDS 35.0%
GGGTATCATATTTATCCAAC+GGG + Chr6:94098418-94098437 None:intergenic 35.0%
GGTATCATATTTATCCAACG+GGG + Chr6:94098417-94098436 None:intergenic 35.0%
GTATCCACGGGTATAATAAA+CGG + Chr6:94098928-94098947 None:intergenic 35.0%
TATCCACGGGTATAATAAAC+GGG + Chr6:94098927-94098946 None:intergenic 35.0%
TCAAATTGTCTCTTTCGTGT+AGG - Chr6:94100143-94100162 MsG0680034760.01.T01:intron 35.0%
TCTAACCTGAAGTAGTTGTT+TGG + Chr6:94097914-94097933 None:intergenic 35.0%
TGATGTGAATGAAGTGGAAA+CGG - Chr6:94098671-94098690 MsG0680034760.01.T01:intron 35.0%
TGCATTCGTACATCTAATCT+AGG + Chr6:94099026-94099045 None:intergenic 35.0%
TGTATTCATACTGGTGGAAA+AGG - Chr6:94100506-94100525 MsG0680034760.01.T01:CDS 35.0%
TTAAGTGTAACACTGCTGTT+TGG - Chr6:94100714-94100733 MsG0680034760.01.T01:CDS 35.0%
TTCAATGTCATTCCTTTCCT+TGG - Chr6:94097297-94097316 MsG0680034760.01.T01:three_prime_UTR 35.0%
TTGAATTGTATCCATACCCA+CGG + Chr6:94098866-94098885 None:intergenic 35.0%
TTGGCTTATTGTGAAGCTAA+GGG - Chr6:94100641-94100660 MsG0680034760.01.T01:CDS 35.0%
! CTACAAATGCTTCTAGGAAA+AGG + Chr6:94097505-94097524 None:intergenic 35.0%
! TTTGGCTTATTGTGAAGCTA+AGG - Chr6:94100640-94100659 MsG0680034760.01.T01:CDS 35.0%
!! GATGAGATACAAAAAGTGCT+TGG - Chr6:94100536-94100555 MsG0680034760.01.T01:CDS 35.0%
!! TGACATGATGGTATTGACTT+GGG - Chr6:94100844-94100863 MsG0680034760.01.T01:CDS 35.0%
!! TTGACATGATGGTATTGACT+TGG - Chr6:94100843-94100862 MsG0680034760.01.T01:CDS 35.0%
AATTGTCTCTTTCGTGTAGG+TGG - Chr6:94100146-94100165 MsG0680034760.01.T01:intron 40.0%
ACAGCAAACATCACAACACT+TGG - Chr6:94100362-94100381 MsG0680034760.01.T01:intron 40.0%
ACCCTAATGTCAGTTTGAGT+GGG - Chr6:94100908-94100927 MsG0680034760.01.T01:CDS 40.0%
AGCACAGAAAACATCAACAG+TGG - Chr6:94100086-94100105 MsG0680034760.01.T01:intron 40.0%
ATACCCGTTTATTATACCCG+TGG - Chr6:94098921-94098940 MsG0680034760.01.T01:intron 40.0%
ATAGAACTTGGATTGAGCCA+AGG + Chr6:94097317-94097336 None:intergenic 40.0%
ATCAACAGTGGATGGTACTT+AGG - Chr6:94100098-94100117 MsG0680034760.01.T01:intron 40.0%
ATCATATTTATCCAACGGGG+CGG + Chr6:94098414-94098433 None:intergenic 40.0%
ATTGCACTAAGAGAAGGTGA+AGG + Chr6:94097799-94097818 None:intergenic 40.0%
CAGAAAACATCAACAGTGGA+TGG - Chr6:94100090-94100109 MsG0680034760.01.T01:intron 40.0%
CTTATTGTGAAGCTAAGGGA+AGG - Chr6:94100645-94100664 MsG0680034760.01.T01:CDS 40.0%
GATTAATCCTTGGAGTGATG+AGG - Chr6:94100769-94100788 MsG0680034760.01.T01:CDS 40.0%
GCTAAGGGAAGGATAAGAAA+AGG - Chr6:94100656-94100675 MsG0680034760.01.T01:CDS 40.0%
GCTTATGTCTCTGACTTAGT+CGG + Chr6:94099456-94099475 None:intergenic 40.0%
GGATGTCAATGGATACACAT+GGG - Chr6:94098365-94098384 MsG0680034760.01.T01:intron 40.0%
GTGTACGAACAGTGTGTTTA+AGG + Chr6:94100226-94100245 None:intergenic 40.0%
GTTGTAGCATGTATGGGAAA+TGG - Chr6:94101029-94101048 MsG0680034760.01.T01:CDS 40.0%
TAGTTGTTTGGCAAGGTCTA+TGG + Chr6:94097902-94097921 None:intergenic 40.0%
TCAATGGATACACATGGGTA+CGG - Chr6:94098370-94098389 MsG0680034760.01.T01:intron 40.0%
TCCTTGCTACAAATGCTTCT+AGG + Chr6:94097511-94097530 None:intergenic 40.0%
TCGAACCAAAAACCTTGAGA+AGG + Chr6:94100885-94100904 None:intergenic 40.0%
TGAATTGTATCCATACCCAC+GGG + Chr6:94098865-94098884 None:intergenic 40.0%
TTAACCCCCTCGTACAAAAA+TGG - Chr6:94099876-94099895 MsG0680034760.01.T01:intron 40.0%
TTCACCTTCTCTTAGTGCAA+TGG - Chr6:94097798-94097817 MsG0680034760.01.T01:CDS 40.0%
TTCTATACCCTCCCTATCAT+TGG - Chr6:94097331-94097350 MsG0680034760.01.T01:three_prime_UTR 40.0%
! CGGTTAGTTAAGTAGTCTAG+CGG - Chr6:94099157-94099176 MsG0680034760.01.T01:intron 40.0%
! GTTTTCTGTGCTCACTACTA+AGG + Chr6:94100078-94100097 None:intergenic 40.0%
!! AGTCGGATCTTCATTTTGAC+CGG - Chr6:94098241-94098260 MsG0680034760.01.T01:CDS 40.0%
!! ATCTTCATTTTGACCGGGAA+CGG - Chr6:94098247-94098266 MsG0680034760.01.T01:CDS 40.0%
!! TCCTAGAAGCATTTGTAGCA+AGG - Chr6:94097507-94097526 MsG0680034760.01.T01:three_prime_UTR 40.0%
!! TGTTGGTGTCGTATTTGTGT+CGG - Chr6:94099548-94099567 MsG0680034760.01.T01:intron 40.0%
!!! AAGCTAGCCATTTTTGTACG+AGG + Chr6:94099886-94099905 None:intergenic 40.0%
!!! AGCTAGCCATTTTTGTACGA+GGG + Chr6:94099885-94099904 None:intergenic 40.0%
!!! ATTGAGGATTTTTAGGTGGG+CGG - Chr6:94098743-94098762 MsG0680034760.01.T01:intron 40.0%
ACTTGGATTGAGCCAAGGAA+AGG + Chr6:94097312-94097331 None:intergenic 45.0%
AGAGGGAAGTCTCCAATGAT+AGG + Chr6:94097346-94097365 None:intergenic 45.0%
AGCACCAAAAATCACTGCCT+CGG + Chr6:94097698-94097717 None:intergenic 45.0%
AGCCCACTCAAACTGACATT+AGG + Chr6:94100913-94100932 None:intergenic 45.0%
ATGGATACCTCAATACCCAC+GGG + Chr6:94098482-94098501 None:intergenic 45.0%
CACACTGTTCGTACACACAA+AGG - Chr6:94100230-94100249 MsG0680034760.01.T01:intron 45.0%
CACCCTAATGTCAGTTTGAG+TGG - Chr6:94100907-94100926 MsG0680034760.01.T01:CDS 45.0%
CATGGATACCTCAATACCCA+CGG + Chr6:94098483-94098502 None:intergenic 45.0%
CCTGAAGTAGTTGTTTGGCA+AGG + Chr6:94097909-94097928 None:intergenic 45.0%
CCTTGCCAAACAACTACTTC+AGG - Chr6:94097906-94097925 MsG0680034760.01.T01:CDS 45.0%
GAAGTCTCCAATGATAGGGA+GGG + Chr6:94097341-94097360 None:intergenic 45.0%
GAGGGAAGTCTCCAATGATA+GGG + Chr6:94097345-94097364 None:intergenic 45.0%
GCCCACTCAAACTGACATTA+GGG + Chr6:94100912-94100931 None:intergenic 45.0%
GGGATGTCAATGGATACACA+TGG - Chr6:94098364-94098383 MsG0680034760.01.T01:intron 45.0%
TCATATTTATCCAACGGGGC+GGG + Chr6:94098413-94098432 None:intergenic 45.0%
TCATGAACCTCATCACTCCA+AGG + Chr6:94100779-94100798 None:intergenic 45.0%
TCGTACATCTAATCTAGGGG+TGG + Chr6:94099021-94099040 None:intergenic 45.0%
TGCCAATTGAGCTATGCTCA+CGG - Chr6:94099262-94099281 MsG0680034760.01.T01:intron 45.0%
TGGCAAATTGCATTTGGGTC+TGG - Chr6:94100689-94100708 MsG0680034760.01.T01:CDS 45.0%
TGTAGCAAGGAAAGAAACCG+AGG - Chr6:94097678-94097697 MsG0680034760.01.T01:CDS 45.0%
TGTCCAACATGTGTCATGTC+CGG + Chr6:94099920-94099939 None:intergenic 45.0%
! CGAAGCCTTGTGTTGTTATG+CGG - Chr6:94099578-94099597 MsG0680034760.01.T01:intron 45.0%
! GAAACCGAGGCAGTGATTTT+TGG - Chr6:94097691-94097710 MsG0680034760.01.T01:CDS 45.0%
! GATAGGGAGGGTATAGAACT+TGG + Chr6:94097329-94097348 None:intergenic 45.0%
! GTGCTCCTTCTCAAGGTTTT+TGG - Chr6:94100877-94100896 MsG0680034760.01.T01:CDS 45.0%
! TGAAAGTGTGCTCCTTCTCA+AGG - Chr6:94100870-94100889 MsG0680034760.01.T01:CDS 45.0%
! TTGAGAAGGAGCACACTTTC+AGG + Chr6:94100871-94100890 None:intergenic 45.0%
!! CTGCTGTTTGGTGTGCATTA+AGG - Chr6:94100726-94100745 MsG0680034760.01.T01:CDS 45.0%
!! GTCGGATCTTCATTTTGACC+GGG - Chr6:94098242-94098261 MsG0680034760.01.T01:CDS 45.0%
!! GTGGGTATTGAGGTATCCAT+GGG - Chr6:94098482-94098501 MsG0680034760.01.T01:intron 45.0%
!!! CTAGCCATTTTTGTACGAGG+GGG + Chr6:94099883-94099902 None:intergenic 45.0%
!!! GCTAGCCATTTTTGTACGAG+GGG + Chr6:94099884-94099903 None:intergenic 45.0%
!! TAATTTACTTAATTTATTAT+CGG - Chr6:94098830-94098849 MsG0680034760.01.T01:intron 5.0%
!!! AAAATATTTTTTATTTCAAT+AGG - Chr6:94099619-94099638 MsG0680034760.01.T01:intron 5.0%
!!! AATATTTTAATTCAAAAATT+AGG - Chr6:94100444-94100463 MsG0680034760.01.T01:intron 5.0%
!!! ATATTTTAATTCAAAAATTA+GGG - Chr6:94100445-94100464 MsG0680034760.01.T01:intron 5.0%
!!! TGAAATAAAAAATATTTTTT+TGG + Chr6:94099617-94099636 None:intergenic 5.0%
!!! TTATTTTATTAAAATATTAC+TGG + Chr6:94099506-94099525 None:intergenic 5.0%
ACTCTAATCAGAGCCGTTCC+CGG + Chr6:94098263-94098282 None:intergenic 50.0%
AGAGAATAAGTGGGGTGTGC+AGG - Chr6:94099200-94099219 MsG0680034760.01.T01:intron 50.0%
AGCCACCGCATAACAACACA+AGG + Chr6:94099586-94099605 None:intergenic 50.0%
AGTGGATACCCACGAGGATA+CGG + Chr6:94098450-94098469 None:intergenic 50.0%
CAAAACTCCATGGGTACCCA+TGG + Chr6:94098501-94098520 None:intergenic 50.0%
CATATTTATCCAACGGGGCG+GGG + Chr6:94098412-94098431 None:intergenic 50.0%
CATGGAGAGGGTAGCTAAAC+GGG + Chr6:94098950-94098969 None:intergenic 50.0%
CCTCGTGGGTATCCACTATA+CGG - Chr6:94098453-94098472 MsG0680034760.01.T01:intron 50.0%
CTCGTGGGTAAAATCCGTCA+CGG + Chr6:94098974-94098993 None:intergenic 50.0%
CTCGTGGGTATCCACTATAC+GGG - Chr6:94098454-94098473 MsG0680034760.01.T01:intron 50.0%
GAGAATAAGTGGGGTGTGCA+GGG - Chr6:94099201-94099220 MsG0680034760.01.T01:intron 50.0%
GCAAAAATACCCATGCCCAC+GGG + Chr6:94098999-94099018 None:intergenic 50.0%
GCATGGAGAGGGTAGCTAAA+CGG + Chr6:94098951-94098970 None:intergenic 50.0%
GCCAATTGAGCTATGCTCAC+GGG - Chr6:94099263-94099282 MsG0680034760.01.T01:intron 50.0%
GGAAGTCTCCAATGATAGGG+AGG + Chr6:94097342-94097361 None:intergenic 50.0%
GGCAAAAATACCCATGCCCA+CGG + Chr6:94099000-94099019 None:intergenic 50.0%
GGTAGCTAAACGGGTATCCA+CGG + Chr6:94098941-94098960 None:intergenic 50.0%
GTACCGGACATGACACATGT+TGG - Chr6:94099914-94099933 MsG0680034760.01.T01:intron 50.0%
GTAGCTAAACGGGTATCCAC+GGG + Chr6:94098940-94098959 None:intergenic 50.0%
GTGTCGTATTTGTGTCGGAC+AGG - Chr6:94099553-94099572 MsG0680034760.01.T01:intron 50.0%
TCCCGTGAGCATAGCTCAAT+TGG + Chr6:94099267-94099286 None:intergenic 50.0%
TCGTGGGTAAAATCCGTCAC+GGG + Chr6:94098973-94098992 None:intergenic 50.0%
! AGCCTTGTGTTGTTATGCGG+TGG - Chr6:94099581-94099600 MsG0680034760.01.T01:intron 50.0%
! ATTTTACCCACGAGTACCCG+TGG - Chr6:94098980-94098999 MsG0680034760.01.T01:intron 50.0%
! TTTTACCCACGAGTACCCGT+GGG - Chr6:94098981-94099000 MsG0680034760.01.T01:intron 50.0%
!! AAAATGGCTAGCTTCGTCGC+TGG - Chr6:94099892-94099911 MsG0680034760.01.T01:intron 50.0%
!! CGTGGGTATTGAGGTATCCA+TGG - Chr6:94098481-94098500 MsG0680034760.01.T01:intron 50.0%
GGTAAAATCCGTCACGGGCA+TGG + Chr6:94098968-94098987 None:intergenic 55.0%
GTGGATACCCACGAGGATAC+GGG + Chr6:94098449-94098468 None:intergenic 55.0%
TATCGGGTATGGGTACCCGT+GGG - Chr6:94098847-94098866 MsG0680034760.01.T01:intron 55.0%
TGGATACCCACGAGGATACG+GGG + Chr6:94098448-94098467 None:intergenic 55.0%
TTATCGGGTATGGGTACCCG+TGG - Chr6:94098846-94098865 MsG0680034760.01.T01:intron 55.0%
! AGTGGTATGGGTTGCAGTGC+TGG - Chr6:94097868-94097887 MsG0680034760.01.T01:CDS 55.0%
! GAGGTATCCATGGGTACCCA+TGG - Chr6:94098491-94098510 MsG0680034760.01.T01:intron 55.0%
!! CCGTATAGTGGATACCCACG+AGG + Chr6:94098456-94098475 None:intergenic 55.0%
AATCCGTCACGGGCATGGAG+AGG + Chr6:94098963-94098982 None:intergenic 60.0%
ATACCCACGAGGATACGGGG+CGG + Chr6:94098445-94098464 None:intergenic 60.0%
ATCCACTATACGGGCACCCG+TGG - Chr6:94098463-94098482 MsG0680034760.01.T01:intron 60.0%
ATCCGTCACGGGCATGGAGA+GGG + Chr6:94098962-94098981 None:intergenic 60.0%
GGTATGGGTACCCGTGGGTA+TGG - Chr6:94098852-94098871 MsG0680034760.01.T01:intron 60.0%
TACCCTCTCCATGCCCGTGA+CGG - Chr6:94098957-94098976 MsG0680034760.01.T01:intron 60.0%
TCCACTATACGGGCACCCGT+GGG - Chr6:94098464-94098483 MsG0680034760.01.T01:intron 60.0%
TTTATCCAACGGGGCGGGGA+CGG + Chr6:94098408-94098427 None:intergenic 60.0%
! GCTAGCTTCGTCGCTGGTAC+CGG - Chr6:94099898-94099917 MsG0680034760.01.T01:intron 60.0%
ACCCACGGGTGCCCGTATAG+TGG + Chr6:94098468-94098487 None:intergenic 65.0%
CCACGAGTACCCGTGGGCAT+GGG - Chr6:94098987-94099006 MsG0680034760.01.T01:intron 65.0%
CCATGCCCACGGGTACTCGT+GGG + Chr6:94098989-94099008 None:intergenic 65.0%
TACCCACGAGGATACGGGGC+GGG + Chr6:94098444-94098463 None:intergenic 65.0%
TTATCCAACGGGGCGGGGAC+GGG + Chr6:94098407-94098426 None:intergenic 65.0%
! ACGGGCACCCGTGGGTATTG+AGG - Chr6:94098472-94098491 MsG0680034760.01.T01:intron 65.0%
ACGAGGATACGGGGCGGGCA+CGG + Chr6:94098439-94098458 None:intergenic 70.0%
CCCACGAGTACCCGTGGGCA+TGG - Chr6:94098986-94099005 MsG0680034760.01.T01:intron 70.0%
CCCATGCCCACGGGTACTCG+TGG + Chr6:94098990-94099009 None:intergenic 70.0%
TGCCCGCCCCGTATCCTCGT+GGG - Chr6:94098439-94098458 MsG0680034760.01.T01:intron 70.0%
CGAGGATACGGGGCGGGCAC+GGG + Chr6:94098438-94098457 None:intergenic 75.0%
GATACCCGTCCCCGCCCCGT+TGG - Chr6:94098400-94098419 MsG0680034760.01.T01:intron 75.0%
GTGCCCGCCCCGTATCCTCG+TGG - Chr6:94098438-94098457 MsG0680034760.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 94097262 94101111 94097262 ID=MsG0680034760.01;Name=MsG0680034760.01
Chr6 mRNA 94097262 94101111 94097262 ID=MsG0680034760.01.T01;Parent=MsG0680034760.01;Name=MsG0680034760.01.T01;_AED=0.28;_eAED=0.28;_QI=0|1|0.5|1|1|1|2|288|477
Chr6 exon 94097262 94098317 94097262 ID=MsG0680034760.01.T01:exon:13113;Parent=MsG0680034760.01.T01
Chr6 exon 94100446 94101111 94100446 ID=MsG0680034760.01.T01:exon:13112;Parent=MsG0680034760.01.T01
Chr6 CDS 94100446 94101111 94100446 ID=MsG0680034760.01.T01:cds;Parent=MsG0680034760.01.T01
Chr6 CDS 94097550 94098317 94097550 ID=MsG0680034760.01.T01:cds;Parent=MsG0680034760.01.T01
Chr6 three_prime_UTR 94097262 94097549 94097262 ID=MsG0680034760.01.T01:three_prime_utr;Parent=MsG0680034760.01.T01
Gene Sequence

>MsG0680034760.01.T01

TTGAATCATAGCATATCCAACATGATGAGTAAGTTTTCAATGTCATTCCTTTCCTTGGCTCAATCCAAGTTCTATACCCTCCCTATCATTGGAGACTTCCCTCTAAATATCCAAATATTATTCAACTCTAGTAACATTTTTTCACTTTTACTATGGTGTACCTTAATAGCATCTATATTAACCTTTTACCTAAAGAAATGTTCCAAAAATATATATCTAGTAGATTTTTCATGCTATAAACCTTTTCCTAGAAGCATTTGTAGCAAGGAATTGTTTATAGAAACATCAAGATGTGGAGGACATTTTAGAGATGAGAGCATAGATTTCCAAAAGAAAATTATGGATAAATCTGGATTTGGTGATAAAACTTATGTGCCAGAGAACTTATTGAATATTCCACCAAATATTTGCACTAATGTAGCAAGGAAAGAAACCGAGGCAGTGATTTTTGGTGCTATTGATGATCTTTTGTTGAAGACAAAAATGAAGGTTGAGGATATTGAAATTCTTATAACAAATTGTTGTATTTTCAATCCTTCACCTTCTCTTAGTGCAATGGTTATTAACCATTACAAACTTAAGCATCAAATTTTGTGCTATAATTTAAGTGGTATGGGTTGCAGTGCTGGACTCATAGCCATAGACCTTGCCAAACAACTACTTCAGGTACATCCAAATTCATATGCCTTAGTAGTGAGCACAGAAAACATCAACAGTGGATGGTACTTAGGAAACAACAGATCAATGCTTGTTTCAAATTGTCTCTTTCGTGTAGGTGGTGCAGCTATTTTACTCTCAAACATTTCTTCAGATTCTAACCGTTCAAAATATCTCCTTAAACACACTGTTCGTACACACAAAGGTTCACAAGACAATTGTTACAATTCAATCCTTCAACAAGAAGATGAAACAAACAAAATCATAGGAATATCACTTTCAAAAGGACTAATGAATTCAGCTGGTTTTGCACTTACAGCAAACATCACAACACTTGGAAAATCAGTTTTACCTTTACTAGAACAATTAAAATATGCTACAACTTTTGTAGCTAAAAAATATTTTAATTCAAAAATTAGGGTTTATACACCTGATTTTAAGCTATGTTTTGAGCATTTTTGTATTCATACTGGTGGAAAAGGTGTGCAAGATGAGATACAAAAAGTGCTTGGATTAAGTGATTGGCAAATTGAGCCTTCAAGAATGACACTTTATAGATATGGAAATACTTCAAGTAGTTCTGTTTGGTATGTTTTGGCTTATTGTGAAGCTAAGGGAAGGATAAGAAAAGGTGATAGGATTTGGCAAATTGCATTTGGGTCTGGATTTAAGTGTAACACTGCTGTTTGGTGTGCATTAAGGAATGTTGATCCAATTAAGGAGATTAATCCTTGGAGTGATGAGGTTCATGAATTTCCTGTTGATGTTTCAAAATGA
Protein sequence

>MsG0680034760.01.T01

LNHSISNMMSKFSMSFLSLAQSKFYTLPIIGDFPLNIQILFNSSNIFSLLLWCTLIASILTFYLKKCSKNIYLVDFSCYKPFPRSICSKELFIETSRCGGHFRDESIDFQKKIMDKSGFGDKTYVPENLLNIPPNICTNVARKETEAVIFGAIDDLLLKTKMKVEDIEILITNCCIFNPSPSLSAMVINHYKLKHQILCYNLSGMGCSAGLIAIDLAKQLLQVHPNSYALVVSTENINSGWYLGNNRSMLVSNCLFRVGGAAILLSNISSDSNRSKYLLKHTVRTHKGSQDNCYNSILQQEDETNKIIGISLSKGLMNSAGFALTANITTLGKSVLPLLEQLKYATTFVAKKYFNSKIRVYTPDFKLCFEHFCIHTGGKGVQDEIQKVLGLSDWQIEPSRMTLYRYGNTSSSSVWYVLAYCEAKGRIRKGDRIWQIAFGSGFKCNTAVWCALRNVDPIKEINPWSDEVHEFPVDVSK*