Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012818.01.T01 | XP_013443065.1 | 98.91 | 367 | 4 | 0 | 29 | 395 | 1 | 367 | 0 | 746 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012818.01.T01 | A0A072TU53 | 98.910 | 367 | 4 | 0 | 29 | 395 | 1 | 367 | 0.0 | 746 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0380012818.01 | 0.803881 | 2.820494e-49 | 1.433673e-46 |
| MsG0080048040.01 | MsG0380012818.01 | 0.815769 | 7.800720e-52 | 5.427671e-49 |
| MsG0080048258.01 | MsG0380012818.01 | 0.841741 | 3.954006e-58 | 5.864362e-55 |
| MsG0180000665.01 | MsG0380012818.01 | 0.817397 | 3.367982e-52 | 2.450054e-49 |
| MsG0180000698.01 | MsG0380012818.01 | 0.817734 | 2.828081e-52 | 2.076384e-49 |
| MsG0180001254.01 | MsG0380012818.01 | 0.808988 | 2.362437e-50 | 1.370442e-47 |
| MsG0180001293.01 | MsG0380012818.01 | 0.816577 | 5.147756e-52 | 3.661490e-49 |
| MsG0180001588.01 | MsG0380012818.01 | 0.902053 | 1.435174e-78 | 1.995278e-74 |
| MsG0180002404.01 | MsG0380012818.01 | 0.801467 | 8.882165e-49 | 4.244879e-46 |
| MsG0180003777.01 | MsG0380012818.01 | 0.810244 | 1.269335e-50 | 7.612392e-48 |
| MsG0180003857.01 | MsG0380012818.01 | 0.806817 | 6.840138e-50 | 3.749061e-47 |
| MsG0180003905.01 | MsG0380012818.01 | 0.864730 | 9.853229e-65 | 3.125713e-61 |
| MsG0180003921.01 | MsG0380012818.01 | 0.815391 | 9.468252e-52 | 6.519491e-49 |
| MsG0180004120.01 | MsG0380012818.01 | 0.841088 | 5.873594e-58 | 8.535801e-55 |
| MsG0180004375.01 | MsG0380012818.01 | 0.818714 | 1.697135e-52 | 1.280060e-49 |
| MsG0180004467.01 | MsG0380012818.01 | 0.833955 | 3.961806e-56 | 4.634214e-53 |
| MsG0180004471.01 | MsG0380012818.01 | 0.806838 | 6.773207e-50 | 3.714302e-47 |
| MsG0180004538.01 | MsG0380012818.01 | 0.805526 | 1.279474e-49 | 6.784191e-47 |
| MsG0180004583.01 | MsG0380012818.01 | 0.825890 | 3.661945e-54 | 3.381252e-51 |
| MsG0180004652.01 | MsG0380012818.01 | 0.899145 | 2.646944e-77 | 3.229942e-73 |
| MsG0180004705.01 | MsG0380012818.01 | 0.806874 | 6.654788e-50 | 3.652725e-47 |
| MsG0180004828.01 | MsG0380012818.01 | 0.847277 | 1.280319e-59 | 2.263851e-56 |
| MsG0180005553.01 | MsG0380012818.01 | 0.828148 | 1.055868e-54 | 1.040708e-51 |
| MsG0180005569.01 | MsG0380012818.01 | 0.826638 | 2.431085e-54 | 2.292908e-51 |
| MsG0180006133.01 | MsG0380012818.01 | 0.814710 | 1.341213e-51 | 9.065670e-49 |
| MsG0180006182.01 | MsG0380012818.01 | 0.838234 | 3.245224e-57 | 4.319203e-54 |
| MsG0180006183.01 | MsG0380012818.01 | 0.835717 | 1.425945e-56 | 1.758435e-53 |
| MsG0180006191.01 | MsG0380012818.01 | 0.807867 | 4.097937e-50 | 2.308017e-47 |
| MsG0180006231.01 | MsG0380012818.01 | 0.820252 | 7.568533e-53 | 5.957694e-50 |
| MsG0280010617.01 | MsG0380012818.01 | 0.837138 | 6.204855e-57 | 7.985656e-54 |
| MsG0280011369.01 | MsG0380012818.01 | 0.831668 | 1.465229e-55 | 1.600950e-52 |
| MsG0380011846.01 | MsG0380012818.01 | 0.861471 | 1.002362e-63 | 2.839552e-60 |
| MsG0380012118.01 | MsG0380012818.01 | 0.827206 | 1.777658e-54 | 1.704673e-51 |
| MsG0380012367.01 | MsG0380012818.01 | 0.893997 | 3.731471e-75 | 3.640529e-71 |
| MsG0380012818.01 | MsG0380013041.01 | 0.834271 | 3.301774e-56 | 3.898786e-53 |
| MsG0380012818.01 | MsG0380014197.01 | 0.824039 | 1.001770e-53 | 8.772437e-51 |
| MsG0380012818.01 | MsG0380014542.01 | 0.821677 | 3.555720e-53 | 2.912248e-50 |
| MsG0380012818.01 | MsG0380014544.01 | 0.851277 | 9.855125e-61 | 1.984387e-57 |
| MsG0380012818.01 | MsG0380014807.01 | 0.840417 | 8.806611e-58 | 1.253646e-54 |
| MsG0380012818.01 | MsG0380015357.01 | 0.803150 | 4.000013e-49 | 1.995267e-46 |
| MsG0380012818.01 | MsG0380015402.01 | 0.877564 | 5.680123e-69 | 2.868703e-65 |
| MsG0380012818.01 | MsG0380015434.01 | 0.813236 | 2.834367e-51 | 1.840694e-48 |
| MsG0380012818.01 | MsG0380015552.01 | 0.830623 | 2.645748e-55 | 2.802621e-52 |
| MsG0380012818.01 | MsG0380015825.01 | 0.833621 | 4.800741e-56 | 5.558826e-53 |
| MsG0380012818.01 | MsG0380016031.01 | 0.822386 | 2.435159e-53 | 2.035389e-50 |
| MsG0380012818.01 | MsG0380016091.01 | 0.833206 | 6.091276e-56 | 6.966436e-53 |
| MsG0380012818.01 | MsG0380016143.01 | 0.819037 | 1.433266e-52 | 1.090810e-49 |
| MsG0380012818.01 | MsG0380016225.01 | 0.811335 | 7.372540e-51 | 4.550926e-48 |
| MsG0380012818.01 | MsG0380016250.01 | 0.811599 | 6.459579e-51 | 4.015309e-48 |
| MsG0380012818.01 | MsG0380016819.01 | 0.844259 | 8.445086e-59 | 1.355665e-55 |
| MsG0380012818.01 | MsG0380017079.01 | 0.898454 | 5.224669e-77 | 6.179644e-73 |
| MsG0380012818.01 | MsG0380017128.01 | 0.805749 | 1.148697e-49 | 6.126367e-47 |
| MsG0380012818.01 | MsG0380017282.01 | 0.808433 | 3.105207e-50 | 1.775286e-47 |
| MsG0380012818.01 | MsG0380017331.01 | 0.804214 | 2.405590e-49 | 1.233154e-46 |
| MsG0380012818.01 | MsG0380017332.01 | 0.821300 | 4.344326e-53 | 3.520784e-50 |
| MsG0380012818.01 | MsG0380017380.01 | 0.806555 | 7.772927e-50 | 4.231584e-47 |
| MsG0380012818.01 | MsG0380017416.01 | 0.814002 | 1.922889e-51 | 1.275063e-48 |
| MsG0380012818.01 | MsG0380017588.01 | 0.878610 | 2.443015e-69 | 1.284030e-65 |
| MsG0380012818.01 | MsG0380017700.01 | 0.818187 | 2.233827e-52 | 1.660582e-49 |
| MsG0380012818.01 | MsG0480018228.01 | 0.830888 | 2.278525e-55 | 2.432699e-52 |
| MsG0380012818.01 | MsG0480018362.01 | 0.823290 | 1.500204e-53 | 1.286298e-50 |
| MsG0380012818.01 | MsG0480018767.01 | 0.892212 | 1.954723e-74 | 1.769944e-70 |
| MsG0380012818.01 | MsG0480020398.01 | 0.816408 | 5.615932e-52 | 3.976023e-49 |
| MsG0380012818.01 | MsG0480021100.01 | 0.803506 | 3.374534e-49 | 1.698811e-46 |
| MsG0380012818.01 | MsG0480021277.01 | 0.801168 | 1.022634e-48 | 4.850619e-46 |
| MsG0380012818.01 | MsG0480021456.01 | 0.807447 | 5.033140e-50 | 2.804064e-47 |
| MsG0380012818.01 | MsG0480021486.01 | 0.859166 | 4.990339e-63 | 1.305628e-59 |
| MsG0380012818.01 | MsG0480021740.01 | 0.889641 | 2.018681e-73 | 1.642516e-69 |
| MsG0380012818.01 | MsG0480021773.01 | 0.838672 | 2.501871e-57 | 3.374993e-54 |
| MsG0380012818.01 | MsG0480021902.01 | 0.811374 | 7.229569e-51 | 4.467599e-48 |
| MsG0380012818.01 | MsG0480022302.01 | 0.813263 | 2.796721e-51 | 1.817590e-48 |
| MsG0380012818.01 | MsG0480022682.01 | 0.801205 | 1.004726e-48 | 4.770110e-46 |
| MsG0380012818.01 | MsG0480022784.01 | 0.812624 | 3.860864e-51 | 2.466855e-48 |
| MsG0380012818.01 | MsG0480023064.01 | 0.802594 | 5.209739e-49 | 2.562183e-46 |
| MsG0380012818.01 | MsG0480023375.01 | -0.824027 | 1.007924e-53 | 8.823649e-51 |
| MsG0380012818.01 | MsG0480023626.01 | 0.852293 | 5.075399e-61 | 1.055700e-57 |
| MsG0380012818.01 | MsG0480023653.01 | 0.840558 | 8.087022e-58 | 1.156249e-54 |
| MsG0380012818.01 | MsG0480023663.01 | 0.821496 | 3.915047e-53 | 3.190206e-50 |
| MsG0380012818.01 | MsG0480023706.01 | 0.872089 | 4.155725e-67 | 1.716389e-63 |
| MsG0380012818.01 | MsG0480023774.01 | 0.800987 | 1.113606e-48 | 5.258407e-46 |
| MsG0380012818.01 | MsG0480023913.01 | 0.844054 | 9.587130e-59 | 1.529421e-55 |
| MsG0380012818.01 | MsG0480024002.01 | 0.807100 | 5.959946e-50 | 3.290413e-47 |
| MsG0380012818.01 | MsG0480024019.01 | 0.817079 | 3.972038e-52 | 2.864284e-49 |
| MsG0380012818.01 | MsG0580024158.01 | 0.824614 | 7.335844e-54 | 6.531775e-51 |
| MsG0380012818.01 | MsG0580024276.01 | 0.806156 | 9.431182e-50 | 5.082471e-47 |
| MsG0380012818.01 | MsG0580024773.01 | 0.836779 | 7.659176e-57 | 9.752117e-54 |
| MsG0380012818.01 | MsG0580024787.01 | 0.805976 | 1.029053e-49 | 5.520173e-47 |
| MsG0380012818.01 | MsG0580024835.01 | 0.807783 | 4.270439e-50 | 2.399994e-47 |
| MsG0380012818.01 | MsG0580025186.01 | 0.810445 | 1.148401e-50 | 6.923617e-48 |
| MsG0380012818.01 | MsG0580026282.01 | 0.822266 | 2.597510e-53 | 2.163475e-50 |
| MsG0380012818.01 | MsG0580026343.01 | 0.836152 | 1.106177e-56 | 1.382149e-53 |
| MsG0380012818.01 | MsG0580026446.01 | 0.817578 | 3.066984e-52 | 2.242046e-49 |
| MsG0380012818.01 | MsG0580027854.01 | 0.822862 | 1.887305e-53 | 1.598889e-50 |
| MsG0380012818.01 | MsG0580028330.01 | 0.818882 | 1.554333e-52 | 1.177879e-49 |
| MsG0380012818.01 | MsG0580028364.01 | 0.826018 | 3.414853e-54 | 3.164525e-51 |
| MsG0380012818.01 | MsG0580028565.01 | 0.829842 | 4.104071e-55 | 4.251067e-52 |
| MsG0380012818.01 | MsG0580028923.01 | 0.806508 | 7.951652e-50 | 4.323636e-47 |
| MsG0380012818.01 | MsG0580028927.01 | 0.803943 | 2.738712e-49 | 1.394328e-46 |
| MsG0380012818.01 | MsG0580028955.01 | 0.817781 | 2.759616e-52 | 2.028711e-49 |
| MsG0380012818.01 | MsG0580030141.01 | 0.830405 | 2.991274e-55 | 3.148510e-52 |
| MsG0380012818.01 | MsG0680031006.01 | 0.833004 | 6.842049e-56 | 7.778101e-53 |
| MsG0380012818.01 | MsG0680031356.01 | 0.813576 | 2.387137e-51 | 1.564762e-48 |
| MsG0380012818.01 | MsG0680033645.01 | 0.828533 | 8.528514e-55 | 8.500673e-52 |
| MsG0380012818.01 | MsG0680034415.01 | 0.815651 | 8.288076e-52 | 5.748043e-49 |
| MsG0380012818.01 | MsG0680034760.01 | 0.823884 | 1.089274e-53 | 9.498478e-51 |
| MsG0380012818.01 | MsG0680035792.01 | 0.814905 | 1.214142e-51 | 8.249709e-49 |
| MsG0380012818.01 | MsG0680035905.01 | 0.885920 | 5.359929e-72 | 3.748330e-68 |
| MsG0380012818.01 | MsG0780036553.01 | 0.842566 | 2.390813e-58 | 3.639634e-55 |
| MsG0380012818.01 | MsG0780038393.01 | 0.896565 | 3.266705e-76 | 3.553672e-72 |
| MsG0380012818.01 | MsG0780038647.01 | 0.838810 | 2.304371e-57 | 3.121755e-54 |
| MsG0380012818.01 | MsG0780038736.01 | 0.816300 | 5.936341e-52 | 4.190806e-49 |
| MsG0380012818.01 | MsG0780039303.01 | 0.824131 | 9.532504e-54 | 8.369819e-51 |
| MsG0380012818.01 | MsG0780040118.01 | 0.829145 | 6.063941e-55 | 6.152978e-52 |
| MsG0380012818.01 | MsG0780040276.01 | 0.830965 | 2.182178e-55 | 2.335014e-52 |
| MsG0380012818.01 | MsG0780040365.01 | 0.833234 | 5.995233e-56 | 6.862054e-53 |
| MsG0380012818.01 | MsG0780040641.01 | 0.812510 | 4.088055e-51 | 2.604292e-48 |
| MsG0380012818.01 | MsG0780040799.01 | 0.802899 | 4.506733e-49 | 2.233762e-46 |
| MsG0380012818.01 | MsG0780040830.01 | 0.869080 | 4.046093e-66 | 1.498524e-62 |
| MsG0380012818.01 | MsG0780040978.01 | 0.880039 | 7.620658e-70 | 4.229619e-66 |
| MsG0380012818.01 | MsG0780040990.01 | 0.864950 | 8.407724e-65 | 2.687980e-61 |
| MsG0380012818.01 | MsG0780041118.01 | 0.809179 | 2.150494e-50 | 1.253940e-47 |
| MsG0380012818.01 | MsG0780041219.01 | 0.820240 | 7.613936e-53 | 5.991449e-50 |
| MsG0380012818.01 | MsG0780041591.01 | 0.848089 | 7.654405e-60 | 1.388713e-56 |
| MsG0380012818.01 | MsG0780041775.01 | 0.857500 | 1.564700e-62 | 3.870065e-59 |
| MsG0380012818.01 | MsG0880042392.01 | 0.836965 | 6.866157e-57 | 8.791615e-54 |
| MsG0380012818.01 | MsG0880042833.01 | 0.844204 | 8.737047e-59 | 1.400321e-55 |
| MsG0380012818.01 | MsG0880043461.01 | 0.806714 | 7.194536e-50 | 3.932595e-47 |
| MsG0380012818.01 | MsG0880043483.01 | 0.836211 | 1.068530e-56 | 1.337665e-53 |
| MsG0380012818.01 | MsG0880043684.01 | 0.880468 | 5.355299e-70 | 3.021461e-66 |
| MsG0380012818.01 | MsG0880043714.01 | 0.863472 | 2.429838e-64 | 7.373664e-61 |
| MsG0380012818.01 | MsG0880043907.01 | 0.814502 | 1.491104e-51 | 1.002307e-48 |
| MsG0380012818.01 | MsG0880044139.01 | 0.812741 | 3.638818e-51 | 2.332199e-48 |
| MsG0380012818.01 | MsG0880044356.01 | 0.816838 | 4.497591e-52 | 3.222063e-49 |
| MsG0380012818.01 | MsG0880044989.01 | 0.816291 | 5.965577e-52 | 4.210440e-49 |
| MsG0380012818.01 | MsG0880045356.01 | 0.874104 | 8.764900e-68 | 3.895872e-64 |
| MsG0380012818.01 | MsG0880045439.01 | 0.841741 | 3.952717e-58 | 5.862528e-55 |
| MsG0380012818.01 | MsG0880045584.01 | 0.822067 | 2.888803e-53 | 2.392245e-50 |
| MsG0380012818.01 | MsG0880045612.01 | 0.834065 | 3.716622e-56 | 4.361434e-53 |
| MsG0380012818.01 | MsG0880045647.01 | 0.867707 | 1.121830e-65 | 3.953997e-62 |
| MsG0380012818.01 | MsG0880045802.01 | 0.815634 | 8.360202e-52 | 5.795405e-49 |
| MsG0380012818.01 | MsG0880045836.01 | 0.841257 | 5.302846e-58 | 7.747217e-55 |
| MsG0380012818.01 | MsG0880045852.01 | 0.810962 | 8.879141e-51 | 5.428181e-48 |
| MsG0380012818.01 | MsG0880045963.01 | 0.828907 | 6.926178e-55 | 6.978184e-52 |
| MsG0380012818.01 | MsG0880045989.01 | 0.816149 | 6.417901e-52 | 4.511872e-49 |
| MsG0380012818.01 | MsG0880046137.01 | 0.810534 | 1.098871e-50 | 6.640597e-48 |
| MsG0380012818.01 | MsG0880046693.01 | 0.823597 | 1.271642e-53 | 1.099863e-50 |
| MsG0380012818.01 | MsG0880046904.01 | 0.825595 | 4.301648e-54 | 3.938573e-51 |
| MsG0380012818.01 | MsG0880046905.01 | 0.800735 | 1.253405e-48 | 5.880377e-46 |
| MsG0380012818.01 | MsG0880046906.01 | 0.820298 | 7.386180e-53 | 5.821560e-50 |
| MsG0380012818.01 | MsG0880046991.01 | 0.847316 | 1.248882e-59 | 2.210862e-56 |
| MsG0380012818.01 | MsG0880046993.01 | 0.802538 | 5.350105e-49 | 2.627430e-46 |
| MsG0380012818.01 | MsG0880047057.01 | 0.826176 | 3.132103e-54 | 2.915537e-51 |
| MsG0380012818.01 | MsG0880047331.01 | 0.849856 | 2.471174e-60 | 4.749038e-57 |
| MsG0380012818.01 | MsG0880047414.01 | 0.815476 | 9.067684e-52 | 6.258667e-49 |
| MsG0380012818.01 | MsG0880047440.01 | 0.817131 | 3.866835e-52 | 2.792405e-49 |
| MsG0380012818.01 | MsG0880047649.01 | 0.835272 | 1.848073e-56 | 2.248961e-53 |
| MsG0280006717.01 | MsG0380012818.01 | 0.824204 | 9.162822e-54 | 8.061948e-51 |
| MsG0280006851.01 | MsG0380012818.01 | 0.811331 | 7.385300e-51 | 4.558395e-48 |
| MsG0280007667.01 | MsG0380012818.01 | 0.825723 | 4.012954e-54 | 3.687581e-51 |
| MsG0280007695.01 | MsG0380012818.01 | 0.811408 | 7.107952e-51 | 4.396481e-48 |
| MsG0280008407.01 | MsG0380012818.01 | 0.816354 | 5.775957e-52 | 4.083404e-49 |
| MsG0280008692.01 | MsG0380012818.01 | 0.847006 | 1.518976e-59 | 2.662463e-56 |
| MsG0280008698.01 | MsG0380012818.01 | 0.808380 | 3.186694e-50 | 1.819373e-47 |
| MsG0280009866.01 | MsG0380012818.01 | 0.884147 | 2.457871e-71 | 1.603516e-67 |
| MsG0280010057.01 | MsG0380012818.01 | 0.818842 | 1.586979e-52 | 1.201291e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380012818.01 | MsG0280011369.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012818.01.T01 | MTR_0045s0110 | 98.910 | 367 | 4 | 0 | 29 | 395 | 1 | 367 | 0.0 | 746 |
| MsG0380012818.01.T01 | MTR_4g039720 | 78.533 | 368 | 78 | 1 | 29 | 395 | 4 | 371 | 0.0 | 628 |
| MsG0380012818.01.T01 | MTR_4g039680 | 80.381 | 367 | 72 | 0 | 29 | 395 | 1 | 367 | 0.0 | 626 |
| MsG0380012818.01.T01 | MTR_4g039740 | 78.202 | 367 | 80 | 0 | 29 | 395 | 1 | 367 | 0.0 | 622 |
| MsG0380012818.01.T01 | MTR_1g011800 | 56.325 | 332 | 143 | 2 | 60 | 389 | 37 | 368 | 2.72e-133 | 387 |
| MsG0380012818.01.T01 | MTR_2g103170 | 48.476 | 361 | 173 | 4 | 37 | 389 | 6 | 361 | 2.18e-119 | 351 |
| MsG0380012818.01.T01 | MTR_2g019600 | 42.416 | 356 | 196 | 2 | 37 | 391 | 18 | 365 | 4.51e-93 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380012818.01.T01 | AT3G08030 | 67.529 | 348 | 112 | 1 | 49 | 395 | 18 | 365 | 1.43e-176 | 496 |
| MsG0380012818.01.T01 | AT3G08030 | 68.731 | 323 | 100 | 1 | 74 | 395 | 1 | 323 | 1.12e-167 | 472 |
| MsG0380012818.01.T01 | AT2G41800 | 62.248 | 347 | 127 | 3 | 50 | 392 | 21 | 367 | 1.28e-155 | 443 |
| MsG0380012818.01.T01 | AT2G41810 | 57.923 | 366 | 153 | 1 | 27 | 391 | 1 | 366 | 4.70e-153 | 437 |
| MsG0380012818.01.T01 | AT5G25460 | 54.571 | 350 | 158 | 1 | 41 | 389 | 12 | 361 | 6.01e-141 | 406 |
| MsG0380012818.01.T01 | AT5G11420 | 56.193 | 331 | 144 | 1 | 60 | 389 | 28 | 358 | 1.74e-139 | 402 |
| MsG0380012818.01.T01 | AT4G32460 | 55.589 | 331 | 146 | 1 | 60 | 389 | 27 | 357 | 8.97e-135 | 390 |
| MsG0380012818.01.T01 | AT4G32460 | 55.589 | 331 | 146 | 1 | 60 | 389 | 27 | 357 | 8.97e-135 | 390 |
| MsG0380012818.01.T01 | AT4G32460 | 55.836 | 317 | 139 | 1 | 74 | 389 | 1 | 317 | 1.03e-130 | 379 |
| MsG0380012818.01.T01 | AT4G32460 | 55.836 | 317 | 139 | 1 | 74 | 389 | 1 | 317 | 1.03e-130 | 379 |
| MsG0380012818.01.T01 | AT1G80240 | 51.964 | 331 | 158 | 1 | 60 | 389 | 30 | 360 | 2.17e-121 | 356 |
| MsG0380012818.01.T01 | AT1G29980 | 41.834 | 349 | 193 | 2 | 53 | 391 | 34 | 382 | 5.58e-94 | 288 |
| MsG0380012818.01.T01 | AT1G29980 | 42.647 | 340 | 185 | 2 | 62 | 391 | 7 | 346 | 7.55e-94 | 286 |
| MsG0380012818.01.T01 | AT2G34510 | 43.155 | 336 | 185 | 2 | 62 | 391 | 43 | 378 | 1.26e-93 | 286 |
| MsG0380012818.01.T01 | AT2G34510 | 45.205 | 292 | 154 | 2 | 106 | 391 | 1 | 292 | 1.66e-85 | 263 |
| MsG0380012818.01.T01 | AT5G14150 | 28.497 | 386 | 232 | 13 | 29 | 395 | 1 | 361 | 6.97e-31 | 122 |
| MsG0380012818.01.T01 | AT5G14150 | 28.497 | 386 | 232 | 13 | 29 | 395 | 1 | 361 | 6.97e-31 | 122 |
Find 99 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTTGGTTGAGTTGAAAAT+TGG | 0.165055 | 3:+25084021 | None:intergenic |
| TTGGTATTCTTTAGGTCTTT+AGG | 0.165937 | 3:+25085535 | None:intergenic |
| ACCCTTCCCTTCGGATTTAA+AGG | 0.170947 | 3:+25083714 | None:intergenic |
| CAACTCTATGCTTTAATTCT+TGG | 0.196335 | 3:-25085343 | MsG0380012818.01.T01:CDS |
| TGGTATTCTTTAGGTCTTTA+GGG | 0.221241 | 3:+25085536 | None:intergenic |
| TTTGCAGTTTATCTTCAAAA+TGG | 0.237288 | 3:-25085580 | MsG0380012818.01.T01:intron |
| TTCAATTTCTCAAACAATTA+AGG | 0.237533 | 3:-25085377 | MsG0380012818.01.T01:CDS |
| CAATGAGCTTGGTATTCTTT+AGG | 0.255171 | 3:+25085527 | None:intergenic |
| ATGGTCTATTGCAGTTAATT+TGG | 0.269737 | 3:-25084076 | MsG0380012818.01.T01:intron |
| TTCTTTAGGTCTTTAGGGTT+TGG | 0.300993 | 3:+25085541 | None:intergenic |
| GTATCACCTTCTGGTATTCT+AGG | 0.307765 | 3:+25086484 | None:intergenic |
| AAGCAAAGAACAAAGCTAAA+AGG | 0.333487 | 3:+25086530 | None:intergenic |
| CATACTAGAATCGATGATTA+TGG | 0.335052 | 3:-25083616 | MsG0380012818.01.T01:CDS |
| CTTTAATTCTTGGTGCTTCA+AGG | 0.361627 | 3:-25085333 | MsG0380012818.01.T01:CDS |
| ACAAGCAGGAGAAATCTTAA+AGG | 0.362453 | 3:+25083408 | None:intergenic |
| CTGTGGTCCTGTTCTTGATC+AGG | 0.368709 | 3:-25083587 | MsG0380012818.01.T01:CDS |
| CGTTGGTTGAGTTGAAAATT+GGG | 0.369942 | 3:+25084022 | None:intergenic |
| GGAGCAGTTGAGCTTGTTGC+TGG | 0.378795 | 3:-25083880 | MsG0380012818.01.T01:CDS |
| TGTGAAGACTGAAGAGGGTT+TGG | 0.379281 | 3:+25086594 | None:intergenic |
| TGTGAAGACTGAAGAGGGTT+TGG | 0.379281 | 3:+25086633 | None:intergenic |
| CCCTTCCCTTCGGATTTAAA+GGG | 0.386595 | 3:+25083715 | None:intergenic |
| TTCATTACCTCTTGTGGGCA+TGG | 0.404023 | 3:+25085093 | None:intergenic |
| AAGGAAATCTAAATAATAGT+TGG | 0.406389 | 3:+25083427 | None:intergenic |
| CTAAAGAATACCAAGCTCAT+TGG | 0.415170 | 3:-25085526 | MsG0380012818.01.T01:CDS |
| TTCAATGTCCCATACGGACT+TGG | 0.415478 | 3:-25083901 | MsG0380012818.01.T01:CDS |
| AAACCATTGATTTCCCATTT+CGG | 0.416936 | 3:+25085490 | None:intergenic |
| GATCTCTACTCACCACTTCC+TGG | 0.417720 | 3:-25083973 | MsG0380012818.01.T01:CDS |
| TCTTCAAAATGGAAACTTTG+AGG | 0.422549 | 3:-25085569 | MsG0380012818.01.T01:CDS |
| TATGTTTCATTACCTCTTGT+GGG | 0.424229 | 3:+25085088 | None:intergenic |
| TCATTACCTCTTGTGGGCAT+GGG | 0.431393 | 3:+25085094 | None:intergenic |
| ATCTCTGTGCCACCACAAAC+TGG | 0.431643 | 3:-25085283 | MsG0380012818.01.T01:CDS |
| CAAACATTGTATAGTCTCAA+TGG | 0.435698 | 3:-25085247 | MsG0380012818.01.T01:CDS |
| AGGAAATCTAAATAATAGTT+GGG | 0.447042 | 3:+25083428 | None:intergenic |
| ATATGTTTCATTACCTCTTG+TGG | 0.447241 | 3:+25085087 | None:intergenic |
| TTACCTCTTGTGGGCATGGG+AGG | 0.447604 | 3:+25085097 | None:intergenic |
| GAAATGGGAAATCAATGGTT+TGG | 0.456178 | 3:-25085488 | MsG0380012818.01.T01:CDS |
| CAAATTCATATTTAAGCCAC+AGG | 0.459329 | 3:+25083553 | None:intergenic |
| AAGAGTGTGAAGACTGAAGA+GGG | 0.461889 | 3:+25086589 | None:intergenic |
| CACACTCTTTCAACTTCCAA+TGG | 0.466396 | 3:-25086575 | MsG0380012818.01.T01:CDS |
| TATGAATTTACCCTTCCCTT+CGG | 0.469027 | 3:+25083705 | None:intergenic |
| GCATGTGTTCCATGAGTCAC+TGG | 0.474729 | 3:+25085421 | None:intergenic |
| TCTACTCACCACTTCCTGGT+TGG | 0.493609 | 3:-25083969 | MsG0380012818.01.T01:CDS |
| CTACCGAAATGGGAAATCAA+TGG | 0.495723 | 3:-25085493 | MsG0380012818.01.T01:CDS |
| AAAGTTCCCTTTAAATCCGA+AGG | 0.502674 | 3:-25083721 | MsG0380012818.01.T01:CDS |
| ACTATAACCTGATCAAGAAC+AGG | 0.503775 | 3:+25083580 | None:intergenic |
| TCAACTGCTCCAAGTCCGTA+TGG | 0.504766 | 3:+25083892 | None:intergenic |
| AGAGATCTTCTTGTTGTGGT+GGG | 0.513960 | 3:+25083989 | None:intergenic |
| GTTGAGTTGAAAATTGGGAA+TGG | 0.524305 | 3:+25084027 | None:intergenic |
| CCCTTTAAATCCGAAGGGAA+GGG | 0.525840 | 3:-25083715 | MsG0380012818.01.T01:CDS |
| CATTGATTTCCCATTTCGGT+AGG | 0.526214 | 3:+25085494 | None:intergenic |
| TCCCTTTAAATCCGAAGGGA+AGG | 0.529224 | 3:-25083716 | MsG0380012818.01.T01:CDS |
| AATGGACCCTCTTCAAAGCT+AGG | 0.531679 | 3:+25084045 | None:intergenic |
| ATTAAAGCATAGAGTTGACC+AGG | 0.539744 | 3:+25085349 | None:intergenic |
| GGTTTGGTAGAGTATGTAAC+TGG | 0.542324 | 3:-25085472 | MsG0380012818.01.T01:CDS |
| TAGAGATCTTCTTGTTGTGG+TGG | 0.543583 | 3:+25083988 | None:intergenic |
| CAATGGTGATGTTATTGCAT+GGG | 0.551959 | 3:-25085230 | MsG0380012818.01.T01:CDS |
| CAAACAATTAAGGTCAAACC+TGG | 0.553729 | 3:-25085367 | MsG0380012818.01.T01:CDS |
| GAAAAGAGAGACACCGCCAT+TGG | 0.555042 | 3:+25086559 | None:intergenic |
| AAAGGAACATCACCAGTTTG+TGG | 0.558532 | 3:+25085271 | None:intergenic |
| TACCCTCCCATGCCCACAAG+AGG | 0.564830 | 3:-25085100 | MsG0380012818.01.T01:intron |
| GAGTAGAGATCTTCTTGTTG+TGG | 0.568431 | 3:+25083985 | None:intergenic |
| GGAACACATGCTGTGAGGCT+AGG | 0.569631 | 3:-25085409 | MsG0380012818.01.T01:CDS |
| TAGAATGTGAGTCTAGTCCT+TGG | 0.569730 | 3:+25083652 | None:intergenic |
| TCGACAATCCAACCAGGAAG+TGG | 0.573834 | 3:+25083961 | None:intergenic |
| TGTTCTGAGAATTTGTGCAA+TGG | 0.574231 | 3:+25083846 | None:intergenic |
| GTAGGATCTTCTTGAACACC+AGG | 0.574842 | 3:+25085163 | None:intergenic |
| AAGAGTGTGAAGACTGAAGA+GGG | 0.575840 | 3:+25086628 | None:intergenic |
| ATTGATTTCCCATTTCGGTA+GGG | 0.575983 | 3:+25085495 | None:intergenic |
| AGCTTTAAACTTGAAACTCA+CGG | 0.576730 | 3:+25083681 | None:intergenic |
| AGACTATACAATGTTTGCAA+AGG | 0.576811 | 3:+25085253 | None:intergenic |
| TACCTCTTGTGGGCATGGGA+GGG | 0.579405 | 3:+25085098 | None:intergenic |
| ATAGCAATTGCATCAAGAAG+TGG | 0.589206 | 3:+25085133 | None:intergenic |
| CAACTGCTCCAAGTCCGTAT+GGG | 0.591383 | 3:+25083893 | None:intergenic |
| AAAGAGTGTGAAGACTGAAG+AGG | 0.596731 | 3:+25086588 | None:intergenic |
| AAGCATTTCAATGTCCCATA+CGG | 0.596764 | 3:-25083907 | MsG0380012818.01.T01:CDS |
| GTAACTGGTGGTCCTCAACC+AGG | 0.599418 | 3:-25085457 | MsG0380012818.01.T01:CDS |
| TACAAGATCACATTCTCAGT+CGG | 0.599440 | 3:-25083808 | MsG0380012818.01.T01:CDS |
| GATGATTATGGTTCTCTCTG+TGG | 0.604613 | 3:-25083604 | MsG0380012818.01.T01:CDS |
| TCAAGAAGTGGACCACAAGT+AGG | 0.610501 | 3:+25085145 | None:intergenic |
| AAGTTCCCTTTAAATCCGAA+GGG | 0.616315 | 3:-25083720 | MsG0380012818.01.T01:CDS |
| TGGTTGTCACGGATCAATGA+TGG | 0.626197 | 3:-25083773 | MsG0380012818.01.T01:CDS |
| AAAGAGTGTGAAGACTGAAG+AGG | 0.634622 | 3:+25086627 | None:intergenic |
| GTTCAAGAAGATCCTACTTG+TGG | 0.647438 | 3:-25085157 | MsG0380012818.01.T01:CDS |
| AATGGTGATGTTATTGCATG+GGG | 0.650399 | 3:-25085229 | MsG0380012818.01.T01:CDS |
| ACTCTTTCAACTTCCAATGG+CGG | 0.651205 | 3:-25086572 | MsG0380012818.01.T01:CDS |
| CATGTGTTCCATGAGTCACT+GGG | 0.658277 | 3:+25085422 | None:intergenic |
| AGTTTAAAGCTATCGCACCA+AGG | 0.662461 | 3:-25083669 | MsG0380012818.01.T01:CDS |
| CTTCAGCCTAGAATACCAGA+AGG | 0.676116 | 3:-25086490 | MsG0380012818.01.T01:intron |
| AAATTCATATTTAAGCCACA+GGG | 0.678492 | 3:+25083554 | None:intergenic |
| TCAATGGTGATGTTATTGCA+TGG | 0.678740 | 3:-25085231 | MsG0380012818.01.T01:CDS |
| TTGGTAGAGTATGTAACTGG+TGG | 0.681166 | 3:-25085469 | MsG0380012818.01.T01:CDS |
| GGAACATCACCAGTTTGTGG+TGG | 0.691615 | 3:+25085274 | None:intergenic |
| AGAGACTCGACAATCCAACC+AGG | 0.692678 | 3:+25083955 | None:intergenic |
| TCAGGTTATAGTGTCCCCTG+TGG | 0.698590 | 3:-25083569 | MsG0380012818.01.T01:CDS |
| TAGGATCTTCTTGAACACCA+GGG | 0.704341 | 3:+25085164 | None:intergenic |
| TGGTGGGAGTAAAACACCGT+TGG | 0.711037 | 3:+25084005 | None:intergenic |
| CTCATGGAACACATGCTGTG+AGG | 0.712106 | 3:-25085414 | MsG0380012818.01.T01:CDS |
| AATTCATATTTAAGCCACAG+GGG | 0.736491 | 3:+25083555 | None:intergenic |
| ACTGGTGGTCCTCAACCAGG+AGG | 0.755609 | 3:-25085454 | MsG0380012818.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATAATAAATAAATGAAA+TGG | + | Chr3:25083610-25083629 | None:intergenic | 10.0% |
| !! | ATTTCTTGTAAAAAAATTGT+GGG | - | Chr3:25083862-25083881 | MsG0380012818.01.T01:CDS | 15.0% |
| !! | CAAAAAAATGAATTGAAAAA+GGG | - | Chr3:25085576-25085595 | MsG0380012818.01.T01:CDS | 15.0% |
| !! | AAAAATCTTATACTAACTGA+TGG | - | Chr3:25085383-25085402 | MsG0380012818.01.T01:CDS | 20.0% |
| !! | AAGGAAATCTAAATAATAGT+TGG | + | Chr3:25086632-25086651 | None:intergenic | 20.0% |
| !! | AGGAAATCTAAATAATAGTT+GGG | + | Chr3:25086631-25086650 | None:intergenic | 20.0% |
| !! | ATAATCATTAATGGCTATAT+CGG | + | Chr3:25085962-25085981 | None:intergenic | 20.0% |
| !! | CATTTCTTGTAAAAAAATTG+TGG | - | Chr3:25083861-25083880 | MsG0380012818.01.T01:CDS | 20.0% |
| !! | CCAAAAAAATGAATTGAAAA+AGG | - | Chr3:25085575-25085594 | MsG0380012818.01.T01:CDS | 20.0% |
| !! | TCAAAGTATAGTGAAAAAAA+AGG | + | Chr3:25083813-25083832 | None:intergenic | 20.0% |
| !! | TTATTCTCTCAAATTACTAT+CGG | + | Chr3:25084220-25084239 | None:intergenic | 20.0% |
| !! | TTCAATTTCTCAAACAATTA+AGG | - | Chr3:25084679-25084698 | MsG0380012818.01.T01:intron | 20.0% |
| !! | TTTGTTAGTACTTTATATGA+GGG | - | Chr3:25083986-25084005 | MsG0380012818.01.T01:CDS | 20.0% |
| !!! | AAAAATCTAAGGTACATTAA+AGG | + | Chr3:25083746-25083765 | None:intergenic | 20.0% |
| !!! | ACTTGATAAGAACTTTTTTT+TGG | - | Chr3:25085330-25085349 | MsG0380012818.01.T01:CDS | 20.0% |
| !!! | AGTTATAGAGTTTTAATGTA+AGG | - | Chr3:25086526-25086545 | MsG0380012818.01.T01:CDS | 20.0% |
| !!! | ATCGACTTCAAATATTTATT+TGG | - | Chr3:25085619-25085638 | MsG0380012818.01.T01:intron | 20.0% |
| !!! | ATTAATGAATTTTCAGATGA+AGG | - | Chr3:25085454-25085473 | MsG0380012818.01.T01:CDS | 20.0% |
| !!! | ATTTGTTAGTACTTTATATG+AGG | - | Chr3:25083985-25084004 | MsG0380012818.01.T01:CDS | 20.0% |
| !!! | ATTTTTCTTAGCATTTCTTT+TGG | - | Chr3:25085908-25085927 | MsG0380012818.01.T01:intron | 20.0% |
| !!! | CCTTTTTCAATTCATTTTTT+TGG | + | Chr3:25085578-25085597 | None:intergenic | 20.0% |
| ! | AAATTCATATTTAAGCCACA+GGG | + | Chr3:25086505-25086524 | None:intergenic | 25.0% |
| ! | AGTATTAAACAAAACTGATG+TGG | + | Chr3:25084995-25085014 | None:intergenic | 25.0% |
| ! | ATCTATGTAATCATATGTGT+CGG | - | Chr3:25084242-25084261 | MsG0380012818.01.T01:intron | 25.0% |
| ! | ATGTCAAATAGTAACTATAG+TGG | - | Chr3:25085207-25085226 | MsG0380012818.01.T01:CDS | 25.0% |
| ! | CAATAGACCATAATCATTAA+TGG | + | Chr3:25085971-25085990 | None:intergenic | 25.0% |
| ! | GATATAGCCATTAATGATTA+TGG | - | Chr3:25085961-25085980 | MsG0380012818.01.T01:intron | 25.0% |
| ! | GCAAAAAAACATACATTTGA+GGG | + | Chr3:25085646-25085665 | None:intergenic | 25.0% |
| ! | TCTACATAATTGAACTTAAC+AGG | - | Chr3:25085306-25085325 | MsG0380012818.01.T01:CDS | 25.0% |
| ! | TGAACAAAGTTTCAATTTCT+TGG | - | Chr3:25084047-25084066 | MsG0380012818.01.T01:CDS | 25.0% |
| ! | TGCAAAAAAACATACATTTG+AGG | + | Chr3:25085647-25085666 | None:intergenic | 25.0% |
| ! | TTTGCAGTTTATCTTCAAAA+TGG | - | Chr3:25084476-25084495 | MsG0380012818.01.T01:intron | 25.0% |
| !! | TTTTTCACTATACTTTGATG+TGG | - | Chr3:25083815-25083834 | MsG0380012818.01.T01:CDS | 25.0% |
| !!! | AAAAGAGTTGCACTTTTTAA+TGG | - | Chr3:25085687-25085706 | MsG0380012818.01.T01:intron | 25.0% |
| !!! | TAGAGTTTTAATGTAAGGTA+TGG | - | Chr3:25086531-25086550 | MsG0380012818.01.T01:CDS | 25.0% |
| AACAGACAATACTTCAACAA+AGG | + | Chr3:25084150-25084169 | None:intergenic | 30.0% | |
| AAGCAAAGAACAAAGCTAAA+AGG | + | Chr3:25083529-25083548 | None:intergenic | 30.0% | |
| AATTCATATTTAAGCCACAG+GGG | + | Chr3:25086504-25086523 | None:intergenic | 30.0% | |
| ACAAGCACTAAATAGCATAT+TGG | + | Chr3:25085059-25085078 | None:intergenic | 30.0% | |
| ACAGACAATACTTCAACAAA+GGG | + | Chr3:25084149-25084168 | None:intergenic | 30.0% | |
| ACTTTCATATGTTCCATTGT+TGG | - | Chr3:25083659-25083678 | MsG0380012818.01.T01:CDS | 30.0% | |
| AGACTATACAATGTTTGCAA+AGG | + | Chr3:25084806-25084825 | None:intergenic | 30.0% | |
| ATATGATAGACCAAAGAACA+TGG | + | Chr3:25085486-25085505 | None:intergenic | 30.0% | |
| ATATGTTTCATTACCTCTTG+TGG | + | Chr3:25084972-25084991 | None:intergenic | 30.0% | |
| ATGGTCTATTGCAGTTAATT+TGG | - | Chr3:25085980-25085999 | MsG0380012818.01.T01:intron | 30.0% | |
| ATGGTTACATTCAATCGTTT+CGG | + | Chr3:25085818-25085837 | None:intergenic | 30.0% | |
| ATTTACGGTGAAGTTTAAGT+GGG | - | Chr3:25083902-25083921 | MsG0380012818.01.T01:CDS | 30.0% | |
| CAAACATTGTATAGTCTCAA+TGG | - | Chr3:25084809-25084828 | MsG0380012818.01.T01:intron | 30.0% | |
| CAAATTCATATTTAAGCCAC+AGG | + | Chr3:25086506-25086525 | None:intergenic | 30.0% | |
| CAACTCTATGCTTTAATTCT+TGG | - | Chr3:25084713-25084732 | MsG0380012818.01.T01:intron | 30.0% | |
| CATACTAGAATCGATGATTA+TGG | - | Chr3:25086440-25086459 | MsG0380012818.01.T01:intron | 30.0% | |
| GAGAAAAATGTATCCAACAA+TGG | + | Chr3:25083675-25083694 | None:intergenic | 30.0% | |
| GATAAACTGCAAAGATAAGA+AGG | + | Chr3:25084469-25084488 | None:intergenic | 30.0% | |
| TAGTAGCTTCAACAAAATCA+TGG | - | Chr3:25085126-25085145 | MsG0380012818.01.T01:CDS | 30.0% | |
| TATGTTTCATTACCTCTTGT+GGG | + | Chr3:25084971-25084990 | None:intergenic | 30.0% | |
| TCTTCAAAATGGAAACTTTG+AGG | - | Chr3:25084487-25084506 | MsG0380012818.01.T01:intron | 30.0% | |
| TGGTATTCTTTAGGTCTTTA+GGG | + | Chr3:25084523-25084542 | None:intergenic | 30.0% | |
| TTAGTGCTTGTTTGATATCA+TGG | - | Chr3:25085068-25085087 | MsG0380012818.01.T01:intron | 30.0% | |
| TTGGTATTCTTTAGGTCTTT+AGG | + | Chr3:25084524-25084543 | None:intergenic | 30.0% | |
| ! | AAAATTTTCCCTACCGAAAT+GGG | - | Chr3:25084553-25084572 | MsG0380012818.01.T01:intron | 30.0% |
| ! | ACAAATTTAGGGTCTCAAAT+AGG | + | Chr3:25084121-25084140 | None:intergenic | 30.0% |
| ! | GTAACATTGTTATTGCTACA+TGG | + | Chr3:25083632-25083651 | None:intergenic | 30.0% |
| ! | TATATGTGCTTTGTAGGTTT+TGG | - | Chr3:25084325-25084344 | MsG0380012818.01.T01:intron | 30.0% |
| ! | TGAAAAAGGGAGTATGTATT+TGG | - | Chr3:25085589-25085608 | MsG0380012818.01.T01:intron | 30.0% |
| ! | TTTTGTAGCACTAACACTTT+AGG | + | Chr3:25085875-25085894 | None:intergenic | 30.0% |
| !! | AAAAATCCTAGCTTTGAAGA+GGG | - | Chr3:25086005-25086024 | MsG0380012818.01.T01:intron | 30.0% |
| !! | AAACCATTGATTTCCCATTT+CGG | + | Chr3:25084569-25084588 | None:intergenic | 30.0% |
| !! | AGCTTTAAACTTGAAACTCA+CGG | + | Chr3:25086378-25086397 | None:intergenic | 30.0% |
| !! | GCTTTAAGATCTGTCATTTA+CGG | - | Chr3:25083887-25083906 | MsG0380012818.01.T01:CDS | 30.0% |
| !! | GTTTTAATGTAAGGTATGGT+TGG | - | Chr3:25086535-25086554 | MsG0380012818.01.T01:CDS | 30.0% |
| !! | TGCTTTTTAACCAAGGAAAA+AGG | + | Chr3:25084369-25084388 | None:intergenic | 30.0% |
| !! | TTGCTAACGTTTCTTTTTCA+TGG | - | Chr3:25085550-25085569 | MsG0380012818.01.T01:CDS | 30.0% |
| AAAGTTCCCTTTAAATCCGA+AGG | - | Chr3:25086335-25086354 | MsG0380012818.01.T01:intron | 35.0% | |
| AAGCATTTCAATGTCCCATA+CGG | - | Chr3:25086149-25086168 | MsG0380012818.01.T01:intron | 35.0% | |
| AAGGATCCAATATCCTTCAA+GGG | + | Chr3:25085749-25085768 | None:intergenic | 35.0% | |
| AAGTTCCCTTTAAATCCGAA+GGG | - | Chr3:25086336-25086355 | MsG0380012818.01.T01:intron | 35.0% | |
| ACTATAACCTGATCAAGAAC+AGG | + | Chr3:25086479-25086498 | None:intergenic | 35.0% | |
| ATAGCAATTGCATCAAGAAG+TGG | + | Chr3:25084926-25084945 | None:intergenic | 35.0% | |
| ATGTAGAATCCTAGAAGTGA+AGG | + | Chr3:25085293-25085312 | None:intergenic | 35.0% | |
| ATTAAAGCATAGAGTTGACC+AGG | + | Chr3:25084710-25084729 | None:intergenic | 35.0% | |
| CAAACAATTAAGGTCAAACC+TGG | - | Chr3:25084689-25084708 | MsG0380012818.01.T01:intron | 35.0% | |
| CAATGAGCTTGGTATTCTTT+AGG | + | Chr3:25084532-25084551 | None:intergenic | 35.0% | |
| CAGACAATACTTCAACAAAG+GGG | + | Chr3:25084148-25084167 | None:intergenic | 35.0% | |
| CATTTACGGTGAAGTTTAAG+TGG | - | Chr3:25083901-25083920 | MsG0380012818.01.T01:CDS | 35.0% | |
| CTAAAGAATACCAAGCTCAT+TGG | - | Chr3:25084530-25084549 | MsG0380012818.01.T01:intron | 35.0% | |
| CTATACTTTGATGTGGTTGT+TGG | - | Chr3:25083822-25083841 | MsG0380012818.01.T01:CDS | 35.0% | |
| GAAATGGGAAATCAATGGTT+TGG | - | Chr3:25084568-25084587 | MsG0380012818.01.T01:intron | 35.0% | |
| GATTGAATGTAACCATGTGT+TGG | - | Chr3:25085822-25085841 | MsG0380012818.01.T01:intron | 35.0% | |
| TAAGGATCCAATATCCTTCA+AGG | + | Chr3:25085750-25085769 | None:intergenic | 35.0% | |
| TACAAAGCACATATACTCAG+CGG | + | Chr3:25084320-25084339 | None:intergenic | 35.0% | |
| TACAAGATCACATTCTCAGT+CGG | - | Chr3:25086248-25086267 | MsG0380012818.01.T01:intron | 35.0% | |
| TAGATATGAGTATCACCTTC+TGG | + | Chr3:25083584-25083603 | None:intergenic | 35.0% | |
| TAGCTTCAACAAAATCATGG+TGG | - | Chr3:25085129-25085148 | MsG0380012818.01.T01:CDS | 35.0% | |
| TATGAATTTACCCTTCCCTT+CGG | + | Chr3:25086354-25086373 | None:intergenic | 35.0% | |
| TGTAGAATCCTAGAAGTGAA+GGG | + | Chr3:25085292-25085311 | None:intergenic | 35.0% | |
| TTAGTTCCCTTGAAGGATAT+TGG | - | Chr3:25085740-25085759 | MsG0380012818.01.T01:intron | 35.0% | |
| ! | AAAGGGAGTATGTATTTGGT+TGG | - | Chr3:25085593-25085612 | MsG0380012818.01.T01:intron | 35.0% |
| ! | AAAGGGGTGCAACAAATTTA+GGG | + | Chr3:25084132-25084151 | None:intergenic | 35.0% |
| ! | AAAGTGACTTTTCATAACCC+TGG | - | Chr3:25084875-25084894 | MsG0380012818.01.T01:intron | 35.0% |
| ! | AAGGTTGTTTCCATGTTCTT+TGG | - | Chr3:25085473-25085492 | MsG0380012818.01.T01:CDS | 35.0% |
| ! | AATGGTGATGTTATTGCATG+GGG | - | Chr3:25084827-25084846 | MsG0380012818.01.T01:intron | 35.0% |
| ! | ACTCTATTTAGTTCCCTTGA+AGG | - | Chr3:25085733-25085752 | MsG0380012818.01.T01:intron | 35.0% |
| ! | AGTCTTTATGCCTTTTTCCT+TGG | - | Chr3:25084356-25084375 | MsG0380012818.01.T01:intron | 35.0% |
| ! | ATTGATTTCCCATTTCGGTA+GGG | + | Chr3:25084564-25084583 | None:intergenic | 35.0% |
| ! | CAATGGTGATGTTATTGCAT+GGG | - | Chr3:25084826-25084845 | MsG0380012818.01.T01:intron | 35.0% |
| ! | CCAATTTTCAACTCAACCAA+CGG | - | Chr3:25086035-25086054 | MsG0380012818.01.T01:intron | 35.0% |
| ! | GAAAATTTTCCCTACCGAAA+TGG | - | Chr3:25084552-25084571 | MsG0380012818.01.T01:intron | 35.0% |
| ! | GAACAAGATCTGAAGTTGTT+TGG | - | Chr3:25084428-25084447 | MsG0380012818.01.T01:intron | 35.0% |
| ! | GGAAAATTTTCCAATGAGCT+TGG | + | Chr3:25084543-25084562 | None:intergenic | 35.0% |
| ! | TCAATGGTGATGTTATTGCA+TGG | - | Chr3:25084825-25084844 | MsG0380012818.01.T01:intron | 35.0% |
| ! | TTTTGCAAGTCTTTTGAGCT+TGG | - | Chr3:25086568-25086587 | MsG0380012818.01.T01:CDS | 35.0% |
| !! | CGTTGGTTGAGTTGAAAATT+GGG | + | Chr3:25086037-25086056 | None:intergenic | 35.0% |
| !! | CTTTAATTCTTGGTGCTTCA+AGG | - | Chr3:25084723-25084742 | MsG0380012818.01.T01:intron | 35.0% |
| !! | GAAAAATCCTAGCTTTGAAG+AGG | - | Chr3:25086004-25086023 | MsG0380012818.01.T01:intron | 35.0% |
| !! | GCAACTCTTTTAAGTGTGTT+TGG | + | Chr3:25085678-25085697 | None:intergenic | 35.0% |
| !! | GTTGAGTTGAAAATTGGGAA+TGG | + | Chr3:25086032-25086051 | None:intergenic | 35.0% |
| !! | TGTTCTGAGAATTTGTGCAA+TGG | + | Chr3:25086213-25086232 | None:intergenic | 35.0% |
| !! | TTCTTTAGGTCTTTAGGGTT+TGG | + | Chr3:25084518-25084537 | None:intergenic | 35.0% |
| AAAGGAACATCACCAGTTTG+TGG | + | Chr3:25084788-25084807 | None:intergenic | 40.0% | |
| ACTCTTTCAACTTCCAATGG+CGG | - | Chr3:25083484-25083503 | MsG0380012818.01.T01:three_prime_UTR | 40.0% | |
| AGCAAGATAGATACTGTGGT+TGG | - | Chr3:25083927-25083946 | MsG0380012818.01.T01:CDS | 40.0% | |
| CAACCTTGGTTGAAGAGAAT+GGG | - | Chr3:25084387-25084406 | MsG0380012818.01.T01:intron | 40.0% | |
| CACACTCTTTCAACTTCCAA+TGG | - | Chr3:25083481-25083500 | MsG0380012818.01.T01:three_prime_UTR | 40.0% | |
| CACATAACACACCTAAGTAG+TGG | + | Chr3:25085422-25085441 | None:intergenic | 40.0% | |
| CACTACTTAGGTGTGTTATG+TGG | - | Chr3:25085420-25085439 | MsG0380012818.01.T01:CDS | 40.0% | |
| CCTTGGTTAAAAAGCAACCT+TGG | - | Chr3:25084373-25084392 | MsG0380012818.01.T01:intron | 40.0% | |
| CTACCGAAATGGGAAATCAA+TGG | - | Chr3:25084563-25084582 | MsG0380012818.01.T01:intron | 40.0% | |
| CTATCAGTTCTCCACTACTT+AGG | - | Chr3:25085408-25085427 | MsG0380012818.01.T01:CDS | 40.0% | |
| GAGTAGAGATCTTCTTGTTG+TGG | + | Chr3:25086074-25086093 | None:intergenic | 40.0% | |
| GATCCTTACCTATGAAGCAT+GGG | - | Chr3:25085762-25085781 | MsG0380012818.01.T01:intron | 40.0% | |
| GATGATTATGGTTCTCTCTG+TGG | - | Chr3:25086452-25086471 | MsG0380012818.01.T01:intron | 40.0% | |
| GATGCGAAAAATGGTTGTCA+CGG | - | Chr3:25086272-25086291 | MsG0380012818.01.T01:intron | 40.0% | |
| GCTGAGTATATGTGCTTTGT+AGG | - | Chr3:25084319-25084338 | MsG0380012818.01.T01:intron | 40.0% | |
| GGTAAGCAAGATAGATACTG+TGG | - | Chr3:25083923-25083942 | MsG0380012818.01.T01:CDS | 40.0% | |
| GTATCACCTTCTGGTATTCT+AGG | + | Chr3:25083575-25083594 | None:intergenic | 40.0% | |
| GTTCAAGAAGATCCTACTTG+TGG | - | Chr3:25084899-25084918 | MsG0380012818.01.T01:intron | 40.0% | |
| TAGAATGTGAGTCTAGTCCT+TGG | + | Chr3:25086407-25086426 | None:intergenic | 40.0% | |
| TAGGATCTTCTTGAACACCA+GGG | + | Chr3:25084895-25084914 | None:intergenic | 40.0% | |
| TTGGTAGAGTATGTAACTGG+TGG | - | Chr3:25084587-25084606 | MsG0380012818.01.T01:intron | 40.0% | |
| ! | AAAGAGTGTGAAGACTGAAG+AGG | + | Chr3:25083432-25083451 | None:intergenic | 40.0% |
| ! | AAGAGTGTGAAGACTGAAGA+GGG | + | Chr3:25083431-25083450 | None:intergenic | 40.0% |
| ! | AGAGATCTTCTTGTTGTGGT+GGG | + | Chr3:25086070-25086089 | None:intergenic | 40.0% |
| ! | AGTTTAAAGCTATCGCACCA+AGG | - | Chr3:25086387-25086406 | MsG0380012818.01.T01:intron | 40.0% |
| ! | ATGTTTTTCCCAGTGACTCA+TGG | - | Chr3:25084626-25084645 | MsG0380012818.01.T01:intron | 40.0% |
| ! | CAAAGGGGTGCAACAAATTT+AGG | + | Chr3:25084133-25084152 | None:intergenic | 40.0% |
| ! | GGTTGTTGGAGTCACTTTAT+GGG | - | Chr3:25083836-25083855 | MsG0380012818.01.T01:CDS | 40.0% |
| ! | GGTTTGGTAGAGTATGTAAC+TGG | - | Chr3:25084584-25084603 | MsG0380012818.01.T01:intron | 40.0% |
| ! | TAGAGATCTTCTTGTTGTGG+TGG | + | Chr3:25086071-25086090 | None:intergenic | 40.0% |
| ! | TGGTTGTTGGAGTCACTTTA+TGG | - | Chr3:25083835-25083854 | MsG0380012818.01.T01:CDS | 40.0% |
| ! | TTTTGTACCAAGTGTGTGTC+CGG | + | Chr3:25085185-25085204 | None:intergenic | 40.0% |
| !! | CACATATACTCAGCGGATTA+GGG | + | Chr3:25084313-25084332 | None:intergenic | 40.0% |
| !! | CATTGATTTCCCATTTCGGT+AGG | + | Chr3:25084565-25084584 | None:intergenic | 40.0% |
| !! | CCGTTGGTTGAGTTGAAAAT+TGG | + | Chr3:25086038-25086057 | None:intergenic | 40.0% |
| !!! | CCAAGGTTGCTTTTTAACCA+AGG | + | Chr3:25084376-25084395 | None:intergenic | 40.0% |
| AAAAACATGCCTCCTGGTTG+AGG | + | Chr3:25084614-25084633 | None:intergenic | 45.0% | |
| AATGGACCCTCTTCAAAGCT+AGG | + | Chr3:25086014-25086033 | None:intergenic | 45.0% | |
| ACCCTTCCCTTCGGATTTAA+AGG | + | Chr3:25086345-25086364 | None:intergenic | 45.0% | |
| ATAGGCATGGTATGTGCATC+AGG | + | Chr3:25085268-25085287 | None:intergenic | 45.0% | |
| CATGATATCTATCCGACACC+AGG | - | Chr3:25084284-25084303 | MsG0380012818.01.T01:intron | 45.0% | |
| CATGTGTTCCATGAGTCACT+GGG | + | Chr3:25084637-25084656 | None:intergenic | 45.0% | |
| CCCTTCCCTTCGGATTTAAA+GGG | + | Chr3:25086344-25086363 | None:intergenic | 45.0% | |
| CCCTTTAAATCCGAAGGGAA+GGG | - | Chr3:25086341-25086360 | MsG0380012818.01.T01:intron | 45.0% | |
| CGACATGTCTGTATCATGTC+TGG | + | Chr3:25084194-25084213 | None:intergenic | 45.0% | |
| CTTCAGCCTAGAATACCAGA+AGG | - | Chr3:25083566-25083585 | MsG0380012818.01.T01:CDS | 45.0% | |
| GAAGAGAATGGGAGACTTTC+TGG | - | Chr3:25084398-25084417 | MsG0380012818.01.T01:intron | 45.0% | |
| GCAACCTTGGTTGAAGAGAA+TGG | - | Chr3:25084386-25084405 | MsG0380012818.01.T01:intron | 45.0% | |
| GGATCCTTACCTATGAAGCA+TGG | - | Chr3:25085761-25085780 | MsG0380012818.01.T01:intron | 45.0% | |
| GTAGGATCTTCTTGAACACC+AGG | + | Chr3:25084896-25084915 | None:intergenic | 45.0% | |
| TAGGCATGGTATGTGCATCA+GGG | + | Chr3:25085267-25085286 | None:intergenic | 45.0% | |
| TCAAGAAGTGGACCACAAGT+AGG | + | Chr3:25084914-25084933 | None:intergenic | 45.0% | |
| TCAGTCGGAGATGCGAAAAA+TGG | - | Chr3:25086263-25086282 | MsG0380012818.01.T01:intron | 45.0% | |
| TCATTACCTCTTGTGGGCAT+GGG | + | Chr3:25084965-25084984 | None:intergenic | 45.0% | |
| TCCCTTTAAATCCGAAGGGA+AGG | - | Chr3:25086340-25086359 | MsG0380012818.01.T01:intron | 45.0% | |
| TCTCCCATTCTCTTCAACCA+AGG | + | Chr3:25084393-25084412 | None:intergenic | 45.0% | |
| TGGTTGTCACGGATCAATGA+TGG | - | Chr3:25086283-25086302 | MsG0380012818.01.T01:intron | 45.0% | |
| TGTATGTGCCCATGCTTCAT+AGG | + | Chr3:25085773-25085792 | None:intergenic | 45.0% | |
| TGTGAAGACTGAAGAGGGTT+TGG | + | Chr3:25083426-25083445 | None:intergenic | 45.0% | |
| TTCAATGTCCCATACGGACT+TGG | - | Chr3:25086155-25086174 | MsG0380012818.01.T01:intron | 45.0% | |
| TTCATTACCTCTTGTGGGCA+TGG | + | Chr3:25084966-25084985 | None:intergenic | 45.0% | |
| ! | ATCCTAGAAGTGAAGGGCAT+AGG | + | Chr3:25085286-25085305 | None:intergenic | 45.0% |
| ! | GCACATATACTCAGCGGATT+AGG | + | Chr3:25084314-25084333 | None:intergenic | 45.0% |
| !! | CGGTGGGTTGGACAAAATTA+TGG | + | Chr3:25085157-25085176 | None:intergenic | 45.0% |
| !! | ATTAAAAAAAAAAAAATCTA+AGG | + | Chr3:25083757-25083776 | None:intergenic | 5.0% |
| ACTGGGAAAAACATGCCTCC+TGG | + | Chr3:25084620-25084639 | None:intergenic | 50.0% | |
| AGAGACTCGACAATCCAACC+AGG | + | Chr3:25086104-25086123 | None:intergenic | 50.0% | |
| ATCTCTGTGCCACCACAAAC+TGG | - | Chr3:25084773-25084792 | MsG0380012818.01.T01:intron | 50.0% | |
| CAACTGCTCCAAGTCCGTAT+GGG | + | Chr3:25086166-25086185 | None:intergenic | 50.0% | |
| CAAGTGTGTGTCCGGTATCA+CGG | + | Chr3:25085177-25085196 | None:intergenic | 50.0% | |
| CTCATGGAACACATGCTGTG+AGG | - | Chr3:25084642-25084661 | MsG0380012818.01.T01:intron | 50.0% | |
| CTGTGGTCCTGTTCTTGATC+AGG | - | Chr3:25086469-25086488 | MsG0380012818.01.T01:intron | 50.0% | |
| GAAAAGAGAGACACCGCCAT+TGG | + | Chr3:25083500-25083519 | None:intergenic | 50.0% | |
| GATCTCTACTCACCACTTCC+TGG | - | Chr3:25086083-25086102 | MsG0380012818.01.T01:intron | 50.0% | |
| GCATGTGTTCCATGAGTCAC+TGG | + | Chr3:25084638-25084657 | None:intergenic | 50.0% | |
| GGAACATCACCAGTTTGTGG+TGG | + | Chr3:25084785-25084804 | None:intergenic | 50.0% | |
| GTGCCCATGCTTCATAGGTA+AGG | + | Chr3:25085768-25085787 | None:intergenic | 50.0% | |
| TCAACTGCTCCAAGTCCGTA+TGG | + | Chr3:25086167-25086186 | None:intergenic | 50.0% | |
| TCAGGTTATAGTGTCCCCTG+TGG | - | Chr3:25086487-25086506 | MsG0380012818.01.T01:intron | 50.0% | |
| TCGACAATCCAACCAGGAAG+TGG | + | Chr3:25086098-25086117 | None:intergenic | 50.0% | |
| TCTACTCACCACTTCCTGGT+TGG | - | Chr3:25086087-25086106 | MsG0380012818.01.T01:intron | 50.0% | |
| TCTGACACGACACCAACACA+TGG | + | Chr3:25085837-25085856 | None:intergenic | 50.0% | |
| TGCCTATGCCCTTCACTTCT+AGG | - | Chr3:25085281-25085300 | MsG0380012818.01.T01:CDS | 50.0% | |
| TGGTGGGAGTAAAACACCGT+TGG | + | Chr3:25086054-25086073 | None:intergenic | 50.0% | |
| ! | AGAAGTGAAGGGCATAGGCA+TGG | + | Chr3:25085281-25085300 | None:intergenic | 50.0% |
| ! | TGGGAGACTTTCTGGTGTAC+TGG | - | Chr3:25084406-25084425 | MsG0380012818.01.T01:intron | 50.0% |
| !! | GTCGGTGTTGTGTCATGTGT+CGG | - | Chr3:25084260-25084279 | MsG0380012818.01.T01:intron | 50.0% |
| !! | TGTGTTGGTGTCGTGTCAGA+TGG | - | Chr3:25085837-25085856 | MsG0380012818.01.T01:intron | 50.0% |
| CGTGATACCGGACACACACT+TGG | - | Chr3:25085175-25085194 | MsG0380012818.01.T01:CDS | 55.0% | |
| GGAACACATGCTGTGAGGCT+AGG | - | Chr3:25084647-25084666 | MsG0380012818.01.T01:intron | 55.0% | |
| GTAACTGGTGGTCCTCAACC+AGG | - | Chr3:25084599-25084618 | MsG0380012818.01.T01:intron | 55.0% | |
| TACCTCTTGTGGGCATGGGA+GGG | + | Chr3:25084961-25084980 | None:intergenic | 55.0% | |
| TGTCCAACCCACCGTGATAC+CGG | - | Chr3:25085163-25085182 | MsG0380012818.01.T01:CDS | 55.0% | |
| TGTGTGTCCGGTATCACGGT+GGG | + | Chr3:25085173-25085192 | None:intergenic | 55.0% | |
| TTACCTCTTGTGGGCATGGG+AGG | + | Chr3:25084962-25084981 | None:intergenic | 55.0% | |
| ! | GGATTAGGGTGTCCTGGTGT+CGG | + | Chr3:25084299-25084318 | None:intergenic | 55.0% |
| !! | GGAGCAGTTGAGCTTGTTGC+TGG | - | Chr3:25086176-25086195 | MsG0380012818.01.T01:intron | 55.0% |
| ACTGGTGGTCCTCAACCAGG+AGG | - | Chr3:25084602-25084621 | MsG0380012818.01.T01:intron | 60.0% | |
| GTGTGTGTCCGGTATCACGG+TGG | + | Chr3:25085174-25085193 | None:intergenic | 60.0% | |
| TACCCTCCCATGCCCACAAG+AGG | - | Chr3:25084956-25084975 | MsG0380012818.01.T01:intron | 60.0% | |
| TGTCCGGTATCACGGTGGGT+TGG | + | Chr3:25085169-25085188 | None:intergenic | 60.0% | |
| !! | CTCAGCGGATTAGGGTGTCC+TGG | + | Chr3:25084305-25084324 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 25083416 | 25086662 | 25083416 | ID=MsG0380012818.01;Name=MsG0380012818.01 |
| Chr3 | mRNA | 25083416 | 25086662 | 25083416 | ID=MsG0380012818.01.T01;Parent=MsG0380012818.01;Name=MsG0380012818.01.T01;_AED=0.31;_eAED=0.35;_QI=0|0.5|0.33|1|0.5|0.66|3|148|395 |
| Chr3 | exon | 25083416 | 25084084 | 25083416 | ID=MsG0380012818.01.T01:exon:14095;Parent=MsG0380012818.01.T01 |
| Chr3 | exon | 25085101 | 25085595 | 25085101 | ID=MsG0380012818.01.T01:exon:14094;Parent=MsG0380012818.01.T01 |
| Chr3 | exon | 25086491 | 25086662 | 25086491 | ID=MsG0380012818.01.T01:exon:14093;Parent=MsG0380012818.01.T01 |
| Chr3 | CDS | 25086491 | 25086662 | 25086491 | ID=MsG0380012818.01.T01:cds;Parent=MsG0380012818.01.T01 |
| Chr3 | CDS | 25085101 | 25085595 | 25085101 | ID=MsG0380012818.01.T01:cds;Parent=MsG0380012818.01.T01 |
| Chr3 | CDS | 25083564 | 25084084 | 25083564 | ID=MsG0380012818.01.T01:cds;Parent=MsG0380012818.01.T01 |
| Chr3 | three_prime_UTR | 25083416 | 25083563 | 25083416 | ID=MsG0380012818.01.T01:three_prime_utr;Parent=MsG0380012818.01.T01 |
| Gene Sequence |
| Protein sequence |
