AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035538.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035538.01.T01 MTR_6g012770 75.912 274 4 2 130 403 1 212 4.15e-144 408
MsG0680035538.01.T01 MTR_7g011490 51.812 276 67 5 130 403 1 212 3.67e-89 269
MsG0680035538.01.T01 MTR_4g082315 49.606 254 65 3 150 403 26 216 4.80e-82 251
MsG0680035538.01.T01 MTR_5g042260 43.697 238 95 3 134 369 10 210 4.11e-64 205
MsG0680035538.01.T01 MTR_1g041430 82.524 103 14 1 3 105 253 351 6.26e-51 177
MsG0680035538.01.T01 MTR_5g042320 39.583 240 103 5 134 369 13 214 1.78e-48 164
MsG0680035538.01.T01 MTR_3g072600 35.685 241 107 6 135 369 10 208 4.80e-44 152
MsG0680035538.01.T01 MTR_5g042270 38.182 220 91 4 151 369 1 176 6.57e-43 149
MsG0680035538.01.T01 MTR_2g007210 34.167 240 115 6 130 369 1 197 1.01e-40 144
MsG0680035538.01.T01 MTR_5g058140 34.597 211 94 5 159 369 37 203 1.88e-38 138
MsG0680035538.01.T01 MTR_8g088940 32.377 244 116 4 130 369 4 202 4.64e-36 131
MsG0680035538.01.T01 MTR_1g103070 67.347 98 31 1 5 102 273 369 1.29e-34 133
MsG0680035538.01.T01 MTR_5g042320 46.763 139 69 4 134 268 13 150 3.13e-34 126
MsG0680035538.01.T01 MTR_8g088980 35.057 174 76 2 196 369 17 153 6.96e-33 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035538.01.T01 AT1G26690 46.667 270 80 4 135 403 8 214 9.23e-75 232
MsG0680035538.01.T01 AT1G14010 43.820 267 86 4 138 403 9 212 2.71e-70 220
MsG0680035538.01.T01 AT1G69460 42.963 270 90 4 135 403 8 214 1.49e-67 213
MsG0680035538.01.T01 AT3G29070 44.094 254 79 3 150 403 35 225 3.45e-66 210
MsG0680035538.01.T01 AT2G03290 43.750 256 78 5 150 403 22 213 7.00e-64 204
MsG0680035538.01.T01 AT2G03040 42.935 184 64 4 150 331 22 166 4.35e-42 146
MsG0680035538.01.T01 AT1G09580 33.486 218 102 4 153 369 33 208 4.42e-37 134
MsG0680035538.01.T01 AT1G21900 33.962 212 100 3 158 369 36 207 4.66e-36 132
MsG0680035538.01.T01 AT1G57620 29.461 241 126 5 130 369 6 203 1.17e-32 122
MsG0680035538.01.T01 AT4G14750 56.180 89 27 3 15 102 270 347 7.55e-18 85.5
MsG0680035538.01.T01 AT4G14750 56.180 89 27 3 15 102 211 288 8.32e-18 84.7
MsG0680035538.01.T01 AT4G14750 56.180 89 27 3 15 102 270 347 8.47e-18 85.5

Find 73 sgRNAs with CRISPR-Local

Find 609 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGGTTTCCTTTCGATCT+TGG 0.201282 6:-107772153 MsG0680035538.01.T01:CDS
TACTTCAACCTGCCCTTTCT+TGG 0.237389 6:+107774461 None:intergenic
TGCCTTCAGACATGTATTAT+TGG 0.255793 6:-107774409 MsG0680035538.01.T01:CDS
TGAAACAGCTGAGTAGTAAT+AGG 0.277384 6:+107780854 None:intergenic
GTGACTACACAGCTTGCTTT+TGG 0.308176 6:-107774572 MsG0680035538.01.T01:CDS
CTGTGGCTGGTTTACAACTA+TGG 0.345922 6:-107772121 MsG0680035538.01.T01:CDS
GGAAGAGGATACCCTTCATT+AGG 0.355467 6:+107777116 None:intergenic
TTGGTTTGCTTGTCTGTGGC+TGG 0.363086 6:-107772134 MsG0680035538.01.T01:CDS
ATTGGTAACGGATTCTTCAT+AGG 0.376758 6:+107780788 None:intergenic
TCTGTGTTAGCCATGTAATT+TGG 0.390185 6:+107780750 None:intergenic
GGCAACCTTAGACCAGTCTT+TGG 0.397408 6:+107774482 None:intergenic
ACAGTGATCTTGTGGCTATC+AGG 0.402152 6:+107777095 None:intergenic
GATGAGGTTTGATCTTCAAA+TGG 0.410945 6:-107777210 MsG0680035538.01.T01:CDS
TTATGCTGAGCATGTGGAAT+CGG 0.418300 6:-107774625 MsG0680035538.01.T01:CDS
AGAATTTAATGAAAAGATGA+TGG 0.420743 6:-107772051 MsG0680035538.01.T01:CDS
TGGAAGTAATGGATAGTCAT+TGG 0.432199 6:+107780770 None:intergenic
AAATGTCCACTGCATGCTCT+TGG 0.432429 6:+107780912 None:intergenic
GCCATGTAATTTGGAAGTAA+TGG 0.432522 6:+107780759 None:intergenic
TACTGCCAAAGACTGGTCTA+AGG 0.442286 6:-107774487 MsG0680035538.01.T01:CDS
CTTGAATCTGTTAGTGCTGA+TGG 0.450783 6:+107780936 None:intergenic
CTGTGACTATTGAATTTGAA+TGG 0.451940 6:-107774521 MsG0680035538.01.T01:CDS
TGGTCTAAGGTTGCCAAGAA+AGG 0.455220 6:-107774474 MsG0680035538.01.T01:CDS
GAAACAGCTGAGTAGTAATA+GGG 0.463658 6:+107780855 None:intergenic
AACTCCAGGATGTTCACCTT+CGG 0.468410 6:-107772170 MsG0680035538.01.T01:CDS
AATTCAATAGTCACAGTTGA+CGG 0.472000 6:+107774528 None:intergenic
ACTATGGCATTTGAAGATGA+TGG 0.481525 6:-107772105 MsG0680035538.01.T01:CDS
ATTCAATAGTCACAGTTGAC+GGG 0.489723 6:+107774529 None:intergenic
TATGCTGAGCATGTGGAATC+GGG 0.495767 6:-107774624 MsG0680035538.01.T01:CDS
TTTATGTTAGACCTCTCATT+CGG 0.506567 6:+107780693 None:intergenic
CTATGGCATTTGAAGATGAT+GGG 0.507508 6:-107772104 MsG0680035538.01.T01:CDS
ATGAGGTTTGATCTTCAAAT+GGG 0.512549 6:-107777209 MsG0680035538.01.T01:CDS
GAAACCGAAGGTGAACATCC+TGG 0.518821 6:+107772166 None:intergenic
AGTGTCGTTAATCCTAATGA+AGG 0.521884 6:-107777128 MsG0680035538.01.T01:CDS
GATTGTCTAGTGAAAGCAAA+AGG 0.522795 6:+107780810 None:intergenic
GTGGAGTTACTGCCAAAGAC+TGG 0.527570 6:-107774494 MsG0680035538.01.T01:CDS
TTACCTTGACAGTGATCTTG+TGG 0.531988 6:+107777087 None:intergenic
ATTGAATTTGAATGGAGAAG+TGG 0.532972 6:-107774513 MsG0680035538.01.T01:CDS
ACTGTTCTGTGTTGTGCTGA+AGG 0.533728 6:+107780878 None:intergenic
TCCATTACTTCCAAATTACA+TGG 0.537547 6:-107780760 MsG0680035538.01.T01:CDS
GCTGTGTAGTCACCACCCTC+AGG 0.547793 6:+107774582 None:intergenic
GGTCTAAGGTTGCCAAGAAA+GGG 0.550776 6:-107774473 MsG0680035538.01.T01:CDS
TAATGATTAGTGTTTGAATG+AGG 0.553730 6:+107774645 None:intergenic
ATAAAACATCTCGTCATGGA+TGG 0.554220 6:+107773164 None:intergenic
AAGATCAATGCGATGACCGT+TGG 0.559591 6:-107777158 MsG0680035538.01.T01:CDS
ATCTTGTGGCTATCAGGAAG+AGG 0.560358 6:+107777101 None:intergenic
TACCAATAATACATGTCTGA+AGG 0.563839 6:+107774407 None:intergenic
ATCAGAAGACATTCTTTGAG+AGG 0.564433 6:-107771686 MsG0680035538.01.T01:intron
GATCTTGGTTTGCTTGTCTG+TGG 0.566344 6:-107772138 MsG0680035538.01.T01:CDS
CACAAAGTGCACCGAATGAG+AGG 0.567531 6:-107780704 MsG0680035538.01.T01:CDS
TTAACAAAGCAACCAACTCC+AGG 0.572753 6:-107772184 MsG0680035538.01.T01:CDS
TCTGTTAGTGCTGATGGTGT+TGG 0.580417 6:+107780942 None:intergenic
TAATCATTATGCTGAGCATG+TGG 0.596067 6:-107774631 MsG0680035538.01.T01:CDS
GAAGGTGAACATCCTGGAGT+TGG 0.596638 6:+107772172 None:intergenic
TAAGGTTGCCAAGAAAGGGC+AGG 0.597039 6:-107774469 MsG0680035538.01.T01:CDS
ACAAGCAAACCAAGATCGAA+AGG 0.598244 6:+107772144 None:intergenic
GCATTTACTGCACCTGAGGG+TGG 0.599639 6:-107774594 MsG0680035538.01.T01:CDS
TTGGATACCGAGTAGTAGGA+TGG 0.603350 6:-107774553 MsG0680035538.01.T01:CDS
TGACGAAACTTGTCAATGCG+AGG 0.604782 6:+107777237 None:intergenic
GTGTCGTTAATCCTAATGAA+GGG 0.605712 6:-107777127 MsG0680035538.01.T01:CDS
GAAGATAAAACATCTCGTCA+TGG 0.606067 6:+107773160 None:intergenic
TAATGGATAGTCATTGGTAA+CGG 0.610200 6:+107780776 None:intergenic
CAAGTTTCGTCAATTCGATG+AGG 0.611619 6:-107777226 MsG0680035538.01.T01:CDS
AACGACACTATACTTTCCAA+CGG 0.614680 6:+107777142 None:intergenic
TTTGCATTTACTGCACCTGA+GGG 0.614723 6:-107774597 MsG0680035538.01.T01:CDS
GACGAAACTTGTCAATGCGA+GGG 0.617076 6:+107777238 None:intergenic
ATAAAGCACATCACAGACAA+AGG 0.624982 6:+107774366 None:intergenic
GACGGGGCCATCCTACTACT+CGG 0.631701 6:+107774546 None:intergenic
TAGCACTAAGTGCATTTCTG+AGG 0.642672 6:-107777186 MsG0680035538.01.T01:CDS
CAAGATCGAAAGGAAACCGA+AGG 0.649804 6:+107772154 None:intergenic
TTCAATAGTCACAGTTGACG+GGG 0.649934 6:+107774530 None:intergenic
TAGCCACAAGATCACTGTCA+AGG 0.658774 6:-107777090 MsG0680035538.01.T01:intron
TCAAGTCCAAGAGCATGCAG+TGG 0.670984 6:-107780918 MsG0680035538.01.T01:CDS
CATGTCTGAAGGCAACACCA+AGG 0.710262 6:+107774418 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAATTTTTTAAAAAAAA+TGG - Chr6:107774484-107774503 MsG0680035538.01.T01:CDS 0.0%
!!! TTTAATTTAAATAATTAATT+AGG + Chr6:107775131-107775112 None:intergenic 0.0%
!! AAACGAATATATTAAATTTA+AGG + Chr6:107777190-107777209 None:intergenic 10.0%
!! AAGTATTATATATGATTTAT+GGG + Chr6:107779374-107779393 None:intergenic 10.0%
!! AATGAATTTATTGAAAATTT+AGG - Chr6:107779180-107779199 MsG0680035538.01.T01:intron 10.0%
!! AATTTAAATAATTAATTAGG+TGG + Chr6:107774440-107774459 None:intergenic 10.0%
!! AGAAAATAAAGATAAAATTT+AGG + Chr6:107774996-107775015 None:intergenic 10.0%
!! ATAACTTATAACATTATTTA+AGG - Chr6:107778477-107778496 MsG0680035538.01.T01:intron 10.0%
!! TATATTAATCTTCAATTAAT+TGG - Chr6:107776624-107776643 MsG0680035538.01.T01:intron 10.0%
!! TTATTAATCTATTTAGTAAA+CGG - Chr6:107776787-107776806 MsG0680035538.01.T01:intron 10.0%
!!! AAAGTATTATATATGATTTA+TGG + Chr6:107779375-107779394 None:intergenic 10.0%
!!! ATTGAATAAATTTTTTTGTA+AGG - Chr6:107777118-107777137 MsG0680035538.01.T01:CDS 10.0%
!!! TAAGTTTTTTTTTTTTTTGA+GGG - Chr6:107780062-107780081 MsG0680035538.01.T01:intron 10.0%
!!! TCATTTTCTTAAATTATTAT+TGG - Chr6:107778170-107778189 MsG0680035538.01.T01:intron 10.0%
!!! TGATTCAAATTAAATTTTAT+AGG + Chr6:107779953-107779972 None:intergenic 10.0%
!!! TTAAGTTTTTTTTTTTTTTG+AGG - Chr6:107780061-107780080 MsG0680035538.01.T01:intron 10.0%
!! AAAATAAATAAAGGAAAATG+AGG + Chr6:107775806-107775825 None:intergenic 15.0%
!! AAATGCAATATTTAATGTAT+TGG - Chr6:107776413-107776432 MsG0680035538.01.T01:intron 15.0%
!! AATAGCTATTTAAAAAAGTT+AGG + Chr6:107776852-107776871 None:intergenic 15.0%
!! AATGCAATATTTAATGTATT+GGG - Chr6:107776414-107776433 MsG0680035538.01.T01:intron 15.0%
!! AATTGGTATAAATTCATATT+CGG - Chr6:107776641-107776660 MsG0680035538.01.T01:intron 15.0%
!! AGAAAATAAAGATAAAATGT+AGG - Chr6:107774550-107774569 MsG0680035538.01.T01:CDS 15.0%
!! ATGACTTATAACATTATTTA+AGG - Chr6:107777555-107777574 MsG0680035538.01.T01:intron 15.0%
!! ATTAGCATAAACAAATTAAA+TGG - Chr6:107776716-107776735 MsG0680035538.01.T01:intron 15.0%
!! CAAAAGGAAAAAAAAAAATA+TGG + Chr6:107775689-107775708 None:intergenic 15.0%
!! TAATATAAAGAAAGTGATTA+CGG - Chr6:107780720-107780739 MsG0680035538.01.T01:CDS 15.0%
!! TTAGCATAAACAAATTAAAT+GGG - Chr6:107776717-107776736 MsG0680035538.01.T01:intron 15.0%
!! TTATTTATGGTTTATGAATT+TGG - Chr6:107778036-107778055 MsG0680035538.01.T01:intron 15.0%
!! TTGAGTTATAACATTATTTA+TGG - Chr6:107778023-107778042 MsG0680035538.01.T01:intron 15.0%
!!! AAAATTCTGAGTTTTAAAAT+AGG - Chr6:107775256-107775275 MsG0680035538.01.T01:intron 15.0%
!!! AAAATTGATTTTTTATCCAA+AGG - Chr6:107776466-107776485 MsG0680035538.01.T01:intron 15.0%
!!! AAAGAAACTATTTAAAGTAT+CGG - Chr6:107778338-107778357 MsG0680035538.01.T01:intron 15.0%
!!! AAATTCTGAGTTTTAAAATA+GGG - Chr6:107775257-107775276 MsG0680035538.01.T01:intron 15.0%
!!! AAATTGATTTTTTATCCAAA+GGG - Chr6:107776467-107776486 MsG0680035538.01.T01:intron 15.0%
!!! AAATTTTCAATAAATCCATT+CGG + Chr6:107779239-107779258 None:intergenic 15.0%
!!! AATGGATTTATTGAAAATTT+AGG - Chr6:107779239-107779258 MsG0680035538.01.T01:intron 15.0%
!!! AATTTGTTTATGCTAATTTT+CGG + Chr6:107776713-107776732 None:intergenic 15.0%
!!! ACAATCTTCTTTATATATTT+TGG + Chr6:107773792-107773811 None:intergenic 15.0%
!!! ACTTATTGTTTTTTATTAGT+AGG - Chr6:107775498-107775517 MsG0680035538.01.T01:intron 15.0%
!!! AGTATTTTTTCTACATTTTA+AGG + Chr6:107774831-107774850 None:intergenic 15.0%
!!! GTATTTTTTTCTTCATTTTA+AGG + Chr6:107774732-107774751 None:intergenic 15.0%
!!! GTCATTTTATAAAAATCATT+CGG - Chr6:107775419-107775438 MsG0680035538.01.T01:intron 15.0%
!!! TAAGAAAGATAATTTGATTT+TGG + Chr6:107772988-107773007 None:intergenic 15.0%
!!! TAGTTTTATGTTGAAATTAT+AGG + Chr6:107772819-107772838 None:intergenic 15.0%
!!! TCATTTTCGTAAATTATTAT+TGG - Chr6:107777382-107777401 MsG0680035538.01.T01:intron 15.0%
!!! TTATATTTACTTATGAGTTT+TGG + Chr6:107775477-107775496 None:intergenic 15.0%
!!! TTATTTAAGGTTTCTTAATT+TGG - Chr6:107776541-107776560 MsG0680035538.01.T01:intron 15.0%
!!! TTTTATTGTTCCTTTATATT+TGG - Chr6:107777218-107777237 MsG0680035538.01.T01:CDS 15.0%
!! AAAATTAAAAGAGCCAATAT+AGG + Chr6:107779592-107779611 None:intergenic 20.0%
!! AAATTACATTAATCGATGAA+TGG - Chr6:107779107-107779126 MsG0680035538.01.T01:intron 20.0%
!! AATAACCTATTTGTTTACAT+TGG - Chr6:107776756-107776775 MsG0680035538.01.T01:intron 20.0%
!! AATCTCTTAACACAAAATTA+AGG + Chr6:107777042-107777061 None:intergenic 20.0%
!! AATTCCGAAAAACATTAAAT+TGG - Chr6:107775166-107775185 MsG0680035538.01.T01:intron 20.0%
!! AATTCCGAAAAACATTAAAT+TGG + Chr6:107775185-107775166 None:intergenic 20.0%
!! ACCTAAAAAGTTATAATCTA+TGG - Chr6:107777146-107777165 MsG0680035538.01.T01:CDS 20.0%
!! AGAATTTAATGAAAAGATGA+TGG - Chr6:107781304-107781323 MsG0680035538.01.T01:intron 20.0%
!! ATAGTTTATATTGAAATTCC+TGG + Chr6:107773227-107773246 None:intergenic 20.0%
!! ATCCATTAAATGATTAGAAA+AGG + Chr6:107780613-107780632 None:intergenic 20.0%
!! ATTACATCACAGAAAAAAAA+TGG + Chr6:107779645-107779664 None:intergenic 20.0%
!! ATTATCAGATTGTAATAACT+TGG - Chr6:107781327-107781346 MsG0680035538.01.T01:intron 20.0%
!! ATTCCGAAAAACATTAAATT+GGG - Chr6:107775167-107775186 MsG0680035538.01.T01:intron 20.0%
!! ATTCCGAAAAACATTAAATT+GGG + Chr6:107775186-107775167 None:intergenic 20.0%
!! CCTAAAAAGTTATAATCTAT+GGG - Chr6:107777147-107777166 MsG0680035538.01.T01:CDS 20.0%
!! CGTTGTATTATTGTTTATTT+GGG - Chr6:107779898-107779917 MsG0680035538.01.T01:intron 20.0%
!! CTTTATATTACATAACAATC+AGG + Chr6:107780710-107780729 None:intergenic 20.0%
!! TAATTAGTAAGAATCCAATA+TGG + Chr6:107775726-107775745 None:intergenic 20.0%
!! TATTAATGCAATTCAATTAG+AGG - Chr6:107774026-107774045 MsG0680035538.01.T01:intron 20.0%
!! TCCAAAAATTAATTGTGAAA+AGG - Chr6:107774125-107774144 MsG0680035538.01.T01:intron 20.0%
!! TTGAGTTACAACATTATTTA+AGG - Chr6:107776528-107776547 MsG0680035538.01.T01:intron 20.0%
!! TTTATATGAAGCTATTACAA+AGG - Chr6:107779146-107779165 MsG0680035538.01.T01:intron 20.0%
!!! AAAATTCCGAGTTTTAAAAT+AGG - Chr6:107775196-107775215 MsG0680035538.01.T01:intron 20.0%
!!! AAAATTCCGAGTTTTAAAAT+AGG + Chr6:107775215-107775196 None:intergenic 20.0%
!!! AAAGATAATTTGATTTTGGT+TGG + Chr6:107772984-107773003 None:intergenic 20.0%
!!! AAATTCCGAGTTTTAAAATA+GGG - Chr6:107775197-107775216 MsG0680035538.01.T01:intron 20.0%
!!! AAATTCCGAGTTTTAAAATA+GGG + Chr6:107775216-107775197 None:intergenic 20.0%
!!! AAATTTGAAACTTTATCCAA+AGG - Chr6:107778388-107778407 MsG0680035538.01.T01:intron 20.0%
!!! AAGAAACTATTTAAAGTATC+GGG - Chr6:107778339-107778358 MsG0680035538.01.T01:intron 20.0%
!!! AATTCTGAGTTTTAAAATAG+GGG - Chr6:107775258-107775277 MsG0680035538.01.T01:intron 20.0%
!!! AATTGATTTTTTATCCAAAG+GGG - Chr6:107776468-107776487 MsG0680035538.01.T01:intron 20.0%
!!! AATTTGAAACTTTATCCAAA+GGG - Chr6:107778389-107778408 MsG0680035538.01.T01:intron 20.0%
!!! ACATGCTATTTAAATGATTT+TGG - Chr6:107779413-107779432 MsG0680035538.01.T01:intron 20.0%
!!! ACTGTTGATAATTTAATTGA+TGG - Chr6:107779542-107779561 MsG0680035538.01.T01:intron 20.0%
!!! AGTATTTTTTCTGCAATTTA+AGG - Chr6:107774916-107774935 MsG0680035538.01.T01:intron 20.0%
!!! AGTATTTTTTCTGCATTTTA+AGG - Chr6:107774851-107774870 MsG0680035538.01.T01:intron 20.0%
!!! ATAAAGACTCAAAATTTTGA+AGG + Chr6:107777461-107777480 None:intergenic 20.0%
!!! CAATGTATTTAGAATGTAAA+TGG + Chr6:107780373-107780392 None:intergenic 20.0%
!!! CTAAATTTTGTGTTATATCT+CGG - Chr6:107779781-107779800 MsG0680035538.01.T01:intron 20.0%
!!! GAATTTATTTCTGCATTTTA+AGG - Chr6:107775027-107775046 MsG0680035538.01.T01:intron 20.0%
!!! GTTTTTTTTTCTGCATTTTA+AGG + Chr6:107774529-107774548 None:intergenic 20.0%
!!! TAAAGACTCAAAATTTTGAA+GGG + Chr6:107777460-107777479 None:intergenic 20.0%
!!! TAAAGTTTCAAATTTTGAAG+AGG + Chr6:107778383-107778402 None:intergenic 20.0%
!!! TAGTTTTTTTCTGCATTTTA+AGG + Chr6:107774631-107774650 None:intergenic 20.0%
!!! TATTTAGTCAATGTGATTTT+TGG + Chr6:107775380-107775399 None:intergenic 20.0%
!!! TATTTTTTGAGAGAAAATGA+GGG + Chr6:107775774-107775793 None:intergenic 20.0%
!!! TCCTTTTCACAATTAATTTT+TGG + Chr6:107774129-107774148 None:intergenic 20.0%
!!! TGAAATGATAATGATATTGA+TGG + Chr6:107773369-107773388 None:intergenic 20.0%
!!! TTATTTTTTGAGAGAAAATG+AGG + Chr6:107775775-107775794 None:intergenic 20.0%
!!! TTTCTAATCATTTAATGGAT+TGG - Chr6:107780613-107780632 MsG0680035538.01.T01:intron 20.0%
!!! TTTGATTTGTAATGTTGTTT+TGG - Chr6:107775548-107775567 MsG0680035538.01.T01:intron 20.0%
! AAAAATCTGTTATGATCTTG+TGG + Chr6:107781461-107781480 None:intergenic 25.0%
! AAAATCTGTTATGATCTTGT+GGG + Chr6:107781460-107781479 None:intergenic 25.0%
! AAATAGTTGTATATCACAGA+TGG - Chr6:107781068-107781087 MsG0680035538.01.T01:intron 25.0%
! AATCAATGCAAATTCGAAAA+CGG - Chr6:107773500-107773519 MsG0680035538.01.T01:intron 25.0%
! AGAGCAAAATAGAAATAACA+AGG - Chr6:107781371-107781390 MsG0680035538.01.T01:intron 25.0%
! ATAATAAGATAATGTAGTGG+GGG - Chr6:107775138-107775157 MsG0680035538.01.T01:intron 25.0%
! ATAGCATGTGAAAATTTATC+TGG + Chr6:107779402-107779421 None:intergenic 25.0%
! ATATTACAATAGCATCATCA+TGG - Chr6:107771779-107771798 MsG0680035538.01.T01:intron 25.0%
! ATTCAACACAAATCAAAACT+AGG + Chr6:107776334-107776353 None:intergenic 25.0%
! ATTTAGTAAACGGTCAATTA+TGG - Chr6:107776797-107776816 MsG0680035538.01.T01:intron 25.0%
! ATTTCCATTAAAAGATCACA+TGG + Chr6:107780304-107780323 None:intergenic 25.0%
! CAAAAGGAAAAAAAAAGTTC+AGG - Chr6:107778221-107778240 MsG0680035538.01.T01:intron 25.0%
! CAATATTTAATGTATTGGGT+AGG - Chr6:107776418-107776437 MsG0680035538.01.T01:intron 25.0%
! CACAATCTTTAGCAAATATA+AGG - Chr6:107773835-107773854 MsG0680035538.01.T01:intron 25.0%
! CATCAAACACAACAAATATT+TGG - Chr6:107773689-107773708 MsG0680035538.01.T01:intron 25.0%
! CGAGATATAACACAAAATTT+AGG + Chr6:107779783-107779802 None:intergenic 25.0%
! CGATATATGATAGAACATTA+CGG - Chr6:107777866-107777885 MsG0680035538.01.T01:intron 25.0%
! CTTTACCAATGTAAACAAAT+AGG + Chr6:107776764-107776783 None:intergenic 25.0%
! GATAATAAGATAATGTAGTG+GGG - Chr6:107775137-107775156 MsG0680035538.01.T01:intron 25.0%
! GATGATGTTGTATCTATAAT+GGG - Chr6:107779050-107779069 MsG0680035538.01.T01:intron 25.0%
! GCGTTGTATTATTGTTTATT+TGG - Chr6:107779897-107779916 MsG0680035538.01.T01:intron 25.0%
! GGATAATAAGATAATGTAGT+GGG - Chr6:107775136-107775155 MsG0680035538.01.T01:intron 25.0%
! GTAAATTAAAGCAACATCAA+AGG + Chr6:107776887-107776906 None:intergenic 25.0%
! TAAGAAAATAGAATCGTTTC+AGG - Chr6:107772782-107772801 MsG0680035538.01.T01:intron 25.0%
! TAATGATTAGTGTTTGAATG+AGG + Chr6:107778713-107778732 None:intergenic 25.0%
! TAGCATGTGAAAATTTATCT+GGG + Chr6:107779401-107779420 None:intergenic 25.0%
! TCAACTATAACCACATATAT+CGG + Chr6:107777356-107777375 None:intergenic 25.0%
! TCAATTAGCAAGATAACAAA+AGG - Chr6:107778205-107778224 MsG0680035538.01.T01:intron 25.0%
! TCTTAAATTCATCAGAGTAT+AGG - Chr6:107772888-107772907 MsG0680035538.01.T01:intron 25.0%
! TGGATAATAAGATAATGTAG+TGG - Chr6:107775135-107775154 MsG0680035538.01.T01:intron 25.0%
! TGGGCGTTTAAATTAAAATA+TGG - Chr6:107774224-107774243 MsG0680035538.01.T01:intron 25.0%
! TGTTATATATATTGTAGCAG+AGG + Chr6:107781502-107781521 None:intergenic 25.0%
! TTCCGAAAAACATTAAATTG+GGG - Chr6:107775168-107775187 MsG0680035538.01.T01:intron 25.0%
! TTCCGAAAAACATTAAATTG+GGG + Chr6:107775187-107775168 None:intergenic 25.0%
! TTTGATAAAATGTGTGAATG+AGG + Chr6:107773584-107773603 None:intergenic 25.0%
!! AAAAAAAGCTGAAGCTATTT+TGG - Chr6:107780767-107780786 MsG0680035538.01.T01:CDS 25.0%
!! ATTTGAAACTTTATCCAAAG+GGG - Chr6:107778390-107778409 MsG0680035538.01.T01:intron 25.0%
!! ATTTTCTTTCACTATACACT+TGG + Chr6:107781052-107781071 None:intergenic 25.0%
!! CATTTCTTTTTCTATCTTAC+CGG + Chr6:107780512-107780531 None:intergenic 25.0%
!! CCCATAGATTATAACTTTTT+AGG + Chr6:107777150-107777169 None:intergenic 25.0%
!! CTCCTTTTCTAATCATTTAA+TGG - Chr6:107780608-107780627 MsG0680035538.01.T01:intron 25.0%
!! GAACATGATAATGATATTGA+TGG + Chr6:107773730-107773749 None:intergenic 25.0%
!! GATTCAAAAATGTTTTCCAT+TGG + Chr6:107779086-107779105 None:intergenic 25.0%
!! GTTTTCCTTATAGTTTTTCT+AGG + Chr6:107777806-107777825 None:intergenic 25.0%
!! TCACATTGACTAAATACTAT+TGG - Chr6:107775384-107775403 MsG0680035538.01.T01:intron 25.0%
!! TCTCTTTTATAGACACATTT+TGG - Chr6:107771985-107772004 MsG0680035538.01.T01:intron 25.0%
!! TGATGATGTTGTATCTATAA+TGG - Chr6:107779049-107779068 MsG0680035538.01.T01:intron 25.0%
!! TTCAGTGTAATTTTATGTGT+TGG - Chr6:107773083-107773102 MsG0680035538.01.T01:intron 25.0%
!!! AAAAAAGCTGAAGCTATTTT+GGG - Chr6:107780768-107780787 MsG0680035538.01.T01:CDS 25.0%
!!! AAAGACTCAAAATTTTGAAG+GGG + Chr6:107777459-107777478 None:intergenic 25.0%
!!! AATTCCGAGTTTTAAAATAG+GGG - Chr6:107775198-107775217 MsG0680035538.01.T01:intron 25.0%
!!! AATTCCGAGTTTTAAAATAG+GGG + Chr6:107775217-107775198 None:intergenic 25.0%
!!! ATTCTGAGTTTTAAAATAGG+GGG - Chr6:107775259-107775278 MsG0680035538.01.T01:intron 25.0%
!!! ATTTTGATATTCCTCGATTT+GGG + Chr6:107776056-107776075 None:intergenic 25.0%
!!! CAATGTGATTTTTGGTATTT+TGG + Chr6:107775372-107775391 None:intergenic 25.0%
!!! TCCATGTATTGATTAGTTTT+CGG - Chr6:107776943-107776962 MsG0680035538.01.T01:intron 25.0%
!!! TGCTTTTCTAAAGTAATTGT+TGG + Chr6:107771689-107771708 None:intergenic 25.0%
!!! TTACTTTTCATTTCAATGTC+AGG + Chr6:107773894-107773913 None:intergenic 25.0%
!!! TTTACTTATGAGTTTTGGTT+TGG + Chr6:107775472-107775491 None:intergenic 25.0%
!!! TTTTCTAAAGTAATTGTTGG+AGG + Chr6:107771686-107771705 None:intergenic 25.0%
AAAATACCTACAACTTCCAA+AGG + Chr6:107780022-107780041 None:intergenic 30.0%
AAAGCGATTTCAACATGTTT+AGG + Chr6:107774184-107774203 None:intergenic 30.0%
AAATCTGTTATGATCTTGTG+GGG + Chr6:107781459-107781478 None:intergenic 30.0%
AAGAACTCAAAACGAAGAAA+CGG + Chr6:107775970-107775989 None:intergenic 30.0%
AATTAGGGTTTGGATTGAAT+CGG + Chr6:107776021-107776040 None:intergenic 30.0%
AATTCAATAGTCACAGTTGA+CGG + Chr6:107778830-107778849 None:intergenic 30.0%
AATTCCGATTGAGTCAAAAT+AGG - Chr6:107775286-107775305 MsG0680035538.01.T01:intron 30.0%
AATTCCGATTGAGTCAAAAT+AGG + Chr6:107775305-107775286 None:intergenic 30.0%
ACAAGATAACATGTAAGCAA+AGG + Chr6:107781010-107781029 None:intergenic 30.0%
AGAAATGCAATAAGTGAAGT+GGG + Chr6:107781622-107781641 None:intergenic 30.0%
AGACAGTTTACAATGTTTGT+TGG - Chr6:107777985-107778004 MsG0680035538.01.T01:intron 30.0%
AGATTATCTTTGTTAAGCCT+AGG + Chr6:107780573-107780592 None:intergenic 30.0%
AGCAAGCAAAAAATTTATGC+CGG + Chr6:107777246-107777265 None:intergenic 30.0%
AGGTGGATAATAAGATAATG+TGG + Chr6:107774423-107774442 None:intergenic 30.0%
ATAATAAGATAATGTGGTGG+GGG + Chr6:107774417-107774436 None:intergenic 30.0%
ATGAGAATGCTTTACATTGT+TGG - Chr6:107778432-107778451 MsG0680035538.01.T01:intron 30.0%
ATGAGGTTTGATCTTCAAAT+GGG - Chr6:107776146-107776165 MsG0680035538.01.T01:intron 30.0%
ATGTTCTTGGTTTCCTATAT+TGG - Chr6:107779576-107779595 MsG0680035538.01.T01:intron 30.0%
ATTCCGATTGAGTCAAAATA+GGG - Chr6:107775287-107775306 MsG0680035538.01.T01:intron 30.0%
ATTCCGATTGAGTCAAAATA+GGG + Chr6:107775306-107775287 None:intergenic 30.0%
ATTGAATTTGAATGGAGAAG+TGG - Chr6:107778842-107778861 MsG0680035538.01.T01:intron 30.0%
CAACTCAAATTCCATTATCT+AGG + Chr6:107780146-107780165 None:intergenic 30.0%
CAAGACCTAGAAAAACTATA+AGG - Chr6:107777798-107777817 MsG0680035538.01.T01:intron 30.0%
CACAAATCAAAACTAGGATT+TGG + Chr6:107776328-107776347 None:intergenic 30.0%
CTCTTAAATTCATAGCGTAT+AGG - Chr6:107773278-107773297 MsG0680035538.01.T01:intron 30.0%
CTGGCAAAGAATAAAAAGTT+AGG - Chr6:107773956-107773975 MsG0680035538.01.T01:intron 30.0%
CTGTGACTATTGAATTTGAA+TGG - Chr6:107778834-107778853 MsG0680035538.01.T01:intron 30.0%
GAATTGACACTTTAGATTGA+AGG - Chr6:107777629-107777648 MsG0680035538.01.T01:intron 30.0%
GATAATAAGATAATGTGGTG+GGG + Chr6:107774418-107774437 None:intergenic 30.0%
GATATGTTCAAGAAAGAAGA+GGG - Chr6:107773755-107773774 MsG0680035538.01.T01:intron 30.0%
GATTATCTTTGTTAAGCCTA+GGG + Chr6:107780572-107780591 None:intergenic 30.0%
GGATAATAAGATAATGTGGT+GGG + Chr6:107774419-107774438 None:intergenic 30.0%
GGATAATATCACAATGTTCT+TGG - Chr6:107779563-107779582 MsG0680035538.01.T01:intron 30.0%
GTCATGGTTTAATTGTTTAG+TGG - Chr6:107779514-107779533 MsG0680035538.01.T01:intron 30.0%
TAAATACTATTGGATGCGTT+TGG - Chr6:107775394-107775413 MsG0680035538.01.T01:intron 30.0%
TACCAATAATACATGTCTGA+AGG + Chr6:107778951-107778970 None:intergenic 30.0%
TAGAAATGCAATAAGTGAAG+TGG + Chr6:107781623-107781642 None:intergenic 30.0%
TCCATTACTTCCAAATTACA+TGG - Chr6:107772595-107772614 MsG0680035538.01.T01:intron 30.0%
TCCGAAAAACATTAAATTGG+GGG - Chr6:107775169-107775188 MsG0680035538.01.T01:intron 30.0%
TCCGAAAAACATTAAATTGG+GGG + Chr6:107775188-107775169 None:intergenic 30.0%
TCCGAAAACTAATCAATACA+TGG + Chr6:107776947-107776966 None:intergenic 30.0%
TGATATGTTCAAGAAAGAAG+AGG - Chr6:107773754-107773773 MsG0680035538.01.T01:intron 30.0%
TGCACATTCTTTGTCATAAA+AGG + Chr6:107779756-107779775 None:intergenic 30.0%
TGCTTACATGTTATCTTGTA+TGG - Chr6:107781011-107781030 MsG0680035538.01.T01:intron 30.0%
TGGATAATAAGATAATGTGG+TGG + Chr6:107774420-107774439 None:intergenic 30.0%
TGTTCAATACTACTCCATAT+TGG - Chr6:107775709-107775728 MsG0680035538.01.T01:intron 30.0%
TTATCCATTTGTCCAATACA+GGG - Chr6:107781130-107781149 MsG0680035538.01.T01:intron 30.0%
TTTATCCATTTGTCCAATAC+AGG - Chr6:107781129-107781148 MsG0680035538.01.T01:intron 30.0%
TTTATGTTAGACCTCTCATT+CGG + Chr6:107772665-107772684 None:intergenic 30.0%
TTTCACACATATTGAGACAA+GGG - Chr6:107776568-107776587 MsG0680035538.01.T01:intron 30.0%
! AAATTCCTGGTCTGTTTTAT+TGG + Chr6:107773214-107773233 None:intergenic 30.0%
! AACGAAGAAACGGAAAATTT+TGG + Chr6:107775960-107775979 None:intergenic 30.0%
! AGAAGCTATTCATTTAAAGC+TGG - Chr6:107780852-107780871 MsG0680035538.01.T01:CDS 30.0%
! AGATGTTTTATCTTCGTGAA+AGG - Chr6:107780203-107780222 MsG0680035538.01.T01:intron 30.0%
! ATGATTTCTGAGAATTCTTG+CGG - Chr6:107780529-107780548 MsG0680035538.01.T01:intron 30.0%
! ATTTTAAGCATAGAGGAACA+AGG + Chr6:107771927-107771946 None:intergenic 30.0%
! CTTTTATAGACACATTTTGG+TGG - Chr6:107771988-107772007 MsG0680035538.01.T01:intron 30.0%
! GATGAACAAAAGACTACTTT+TGG + Chr6:107780428-107780447 None:intergenic 30.0%
! TAATAAGATAATGTAGTGGG+GGG - Chr6:107775139-107775158 MsG0680035538.01.T01:intron 30.0%
! TAATGGATAGTCATTGGTAA+CGG + Chr6:107772582-107772601 None:intergenic 30.0%
! TTATGGGATTTTAAGCATAG+AGG + Chr6:107771934-107771953 None:intergenic 30.0%
! TTGAGTTTTTCACATGTCTT+GGG - Chr6:107777590-107777609 MsG0680035538.01.T01:intron 30.0%
! TTGTCCATGTGATCTTTTAA+TGG - Chr6:107780297-107780316 MsG0680035538.01.T01:intron 30.0%
! TTGTTGTTGTTGTATCCAAT+GGG - Chr6:107777939-107777958 MsG0680035538.01.T01:intron 30.0%
! TTTGAAACTTTATCCAAAGG+GGG - Chr6:107778391-107778410 MsG0680035538.01.T01:intron 30.0%
! TTTTCATTTCAATGTCAGGA+AGG + Chr6:107773890-107773909 None:intergenic 30.0%
! TTTTGATGAGTGTCAAGTTT+GGG - Chr6:107778264-107778283 MsG0680035538.01.T01:intron 30.0%
!! AAACTATTTAAAGTATCGGG+TGG - Chr6:107778342-107778361 MsG0680035538.01.T01:intron 30.0%
!! AACAAAAGACTACTTTTGGT+TGG + Chr6:107780424-107780443 None:intergenic 30.0%
!! AATCATTTAATGGATTGGAG+TGG - Chr6:107780618-107780637 MsG0680035538.01.T01:intron 30.0%
!! ATTTTGAGTCTTTATCCGAA+AGG - Chr6:107777466-107777485 MsG0680035538.01.T01:intron 30.0%
!! GATTTTGATATTCCTCGATT+TGG + Chr6:107776057-107776076 None:intergenic 30.0%
!! TAATTTTATGTGTTGGTGTC+CGG - Chr6:107773090-107773109 MsG0680035538.01.T01:intron 30.0%
!! TATTTTGGATTTGTATGCGA+TGG + Chr6:107775357-107775376 None:intergenic 30.0%
!! TTGAGACACAGAAGTTTTAT+GGG + Chr6:107771950-107771969 None:intergenic 30.0%
!! TTGGTTCTGTTAGTTTGTTA+TGG + Chr6:107775941-107775960 None:intergenic 30.0%
!! TTTGAGACACAGAAGTTTTA+TGG + Chr6:107771951-107771970 None:intergenic 30.0%
!! TTTGAGTTTTTCACATGTCT+TGG - Chr6:107777589-107777608 MsG0680035538.01.T01:intron 30.0%
!! TTTTGAGTCTTTATCCGAAA+GGG - Chr6:107777467-107777486 MsG0680035538.01.T01:intron 30.0%
!!! ATTCCGAGTTTTAAAATAGG+GGG - Chr6:107775199-107775218 MsG0680035538.01.T01:intron 30.0%
!!! ATTCCGAGTTTTAAAATAGG+GGG + Chr6:107775218-107775199 None:intergenic 30.0%
!!! GTAATGTTGTTTTGGTAGAT+AGG - Chr6:107775556-107775575 MsG0680035538.01.T01:intron 30.0%
!!! TTCTGAGTTTTAAAATAGGG+GGG - Chr6:107775260-107775279 MsG0680035538.01.T01:intron 30.0%
AAAGGCGAAACATATTAAGG+TGG + Chr6:107780004-107780023 None:intergenic 35.0%
AACGACACTATACTTTCCAA+CGG + Chr6:107776216-107776235 None:intergenic 35.0%
AATACAGAGTAGTACTGTCA+TGG - Chr6:107779498-107779517 MsG0680035538.01.T01:intron 35.0%
ACATCATCAATATCCAGTCT+CGG + Chr6:107779038-107779057 None:intergenic 35.0%
ACCTTAATATGTTTCGCCTT+TGG - Chr6:107780003-107780022 MsG0680035538.01.T01:intron 35.0%
ACTATGGCATTTGAAGATGA+TGG - Chr6:107781250-107781269 MsG0680035538.01.T01:intron 35.0%
ACTGAGTATTTCACACTTGT+TGG - Chr6:107778507-107778526 MsG0680035538.01.T01:intron 35.0%
ACTTGACACTCATCAAAACT+AGG + Chr6:107778262-107778281 None:intergenic 35.0%
AGAAGGAATCAAAACGACAT+TGG + Chr6:107775995-107776014 None:intergenic 35.0%
AGACAACTACCTACAATTCA+TGG + Chr6:107772298-107772317 None:intergenic 35.0%
AGTAAAGAGAGTGAATCAGA+AGG - Chr6:107777748-107777767 MsG0680035538.01.T01:intron 35.0%
ATAAAACATCTCGTCATGGA+TGG + Chr6:107780194-107780213 None:intergenic 35.0%
ATAAAGCACATCACAGACAA+AGG + Chr6:107778992-107779011 None:intergenic 35.0%
ATCATCAATTGTGATCAGTG+AGG - Chr6:107772849-107772868 MsG0680035538.01.T01:intron 35.0%
ATGGCGAAATCAGACTAAAT+TGG + Chr6:107772279-107772298 None:intergenic 35.0%
ATGTTGGATGGTAATTTGGT+TGG + Chr6:107773189-107773208 None:intergenic 35.0%
ATTCAATAGTCACAGTTGAC+GGG + Chr6:107778829-107778848 None:intergenic 35.0%
ATTCTTACCAACTTGAGAGT+TGG - Chr6:107771872-107771891 MsG0680035538.01.T01:intron 35.0%
CAAGCAAAAAATTTATGCCG+GGG + Chr6:107777244-107777263 None:intergenic 35.0%
CCGAAAAACATTAAATTGGG+GGG - Chr6:107775170-107775189 MsG0680035538.01.T01:intron 35.0%
CCGAAAAACATTAAATTGGG+GGG + Chr6:107775189-107775170 None:intergenic 35.0%
CGAAAAACATTAAATTGGGG+GGG - Chr6:107775171-107775190 MsG0680035538.01.T01:intron 35.0%
CGAAAAACATTAAATTGGGG+GGG + Chr6:107775190-107775171 None:intergenic 35.0%
CGGTCAATTATGGATAAGAT+TGG - Chr6:107776807-107776826 MsG0680035538.01.T01:intron 35.0%
CGTAGCATCACTTAATAATC+CGG + Chr6:107779446-107779465 None:intergenic 35.0%
CTATGGCATTTGAAGATGAT+GGG - Chr6:107781251-107781270 MsG0680035538.01.T01:intron 35.0%
CTGAGTATTTCACACTTGTT+GGG - Chr6:107778508-107778527 MsG0680035538.01.T01:intron 35.0%
CTTGACACTCATCAAAACTA+GGG + Chr6:107778261-107778280 None:intergenic 35.0%
GAAAAACATTAAATTGGGGG+GGG - Chr6:107775172-107775191 MsG0680035538.01.T01:intron 35.0%
GAAACAGCTGAGTAGTAATA+GGG + Chr6:107772503-107772522 None:intergenic 35.0%
GAAGATAAAACATCTCGTCA+TGG + Chr6:107780198-107780217 None:intergenic 35.0%
GAGAAGCTAGTATGTACAAT+GGG - Chr6:107774205-107774224 MsG0680035538.01.T01:intron 35.0%
GATGAGGTTTGATCTTCAAA+TGG - Chr6:107776145-107776164 MsG0680035538.01.T01:intron 35.0%
GATTGTCTAGTGAAAGCAAA+AGG + Chr6:107772548-107772567 None:intergenic 35.0%
GCAAGCAAAAAATTTATGCC+GGG + Chr6:107777245-107777264 None:intergenic 35.0%
GCAATGAGGTTTCATATTGA+AGG - Chr6:107777298-107777317 MsG0680035538.01.T01:intron 35.0%
GCATATAGAGAGAATGCTTA+TGG - Chr6:107777718-107777737 MsG0680035538.01.T01:intron 35.0%
GCCATGTAATTTGGAAGTAA+TGG + Chr6:107772599-107772618 None:intergenic 35.0%
GTGTCTATAAAAGAGAAGCT+TGG + Chr6:107771981-107772000 None:intergenic 35.0%
GTTTCACACATATTGAGACA+AGG - Chr6:107776567-107776586 MsG0680035538.01.T01:intron 35.0%
TAACTTGGATCCACAAATAC+AGG - Chr6:107781342-107781361 MsG0680035538.01.T01:intron 35.0%
TAAGTGTTTGAGCTTACCTT+GGG - Chr6:107773649-107773668 MsG0680035538.01.T01:intron 35.0%
TAATCATTATGCTGAGCATG+TGG - Chr6:107778724-107778743 MsG0680035538.01.T01:intron 35.0%
TCCAAAGGCGAAACATATTA+AGG + Chr6:107780007-107780026 None:intergenic 35.0%
TCCATTATCTAGGTAATGTG+AGG + Chr6:107780136-107780155 None:intergenic 35.0%
TCCTCACATTACCTAGATAA+TGG - Chr6:107780132-107780151 MsG0680035538.01.T01:intron 35.0%
TCTGTGTTAGCCATGTAATT+TGG + Chr6:107772608-107772627 None:intergenic 35.0%
TGAAACAGCTGAGTAGTAAT+AGG + Chr6:107772504-107772523 None:intergenic 35.0%
TGAGAAGCTAGTATGTACAA+TGG - Chr6:107774204-107774223 MsG0680035538.01.T01:intron 35.0%
TGCCTTCAGACATGTATTAT+TGG - Chr6:107778946-107778965 MsG0680035538.01.T01:intron 35.0%
TGGCGAAATCAGACTAAATT+GGG + Chr6:107772278-107772297 None:intergenic 35.0%
TTAAGTGTTTGAGCTTACCT+TGG - Chr6:107773648-107773667 MsG0680035538.01.T01:intron 35.0%
TTAATAAGTCCCAACTCAGT+TGG + Chr6:107775607-107775626 None:intergenic 35.0%
TTATCTTGTATGGCTCTTGT+GGG - Chr6:107781021-107781040 MsG0680035538.01.T01:intron 35.0%
TTCACACATATTGAGACAAG+GGG - Chr6:107776569-107776588 MsG0680035538.01.T01:intron 35.0%
TTCCGATTGAGTCAAAATAG+GGG - Chr6:107775288-107775307 MsG0680035538.01.T01:intron 35.0%
TTCCGATTGAGTCAAAATAG+GGG + Chr6:107775307-107775288 None:intergenic 35.0%
TTGAGAGTAGATTAGATGGA+GGG + Chr6:107772942-107772961 None:intergenic 35.0%
TTGTTATGGTGGTAACTAAC+AGG + Chr6:107775927-107775946 None:intergenic 35.0%
TTTGAGAGTAGATTAGATGG+AGG + Chr6:107772943-107772962 None:intergenic 35.0%
TTTGAGTCTTTATCCGAAAG+GGG - Chr6:107777468-107777487 MsG0680035538.01.T01:intron 35.0%
TTTGATGAGTGTCAAGTTTG+GGG - Chr6:107778265-107778284 MsG0680035538.01.T01:intron 35.0%
TTTGATGGAATGTATACCAG+TGG - Chr6:107774063-107774082 MsG0680035538.01.T01:intron 35.0%
! AAAAGGAGTAAATGATGACG+TGG + Chr6:107781545-107781564 None:intergenic 35.0%
! AAAGGAGTAAATGATGACGT+GGG + Chr6:107781544-107781563 None:intergenic 35.0%
! AATAAGATAATGTAGTGGGG+GGG - Chr6:107775140-107775159 MsG0680035538.01.T01:intron 35.0%
! AATTTTATAGGTACGACGCA+AGG + Chr6:107779941-107779960 None:intergenic 35.0%
! AGTGTCGTTAATCCTAATGA+AGG - Chr6:107776227-107776246 MsG0680035538.01.T01:intron 35.0%
! ATTTCTAGAGGAGTTGCAAA+TGG + Chr6:107779322-107779341 None:intergenic 35.0%
! CCCCCCAATTTAATGTTTTT+CGG - Chr6:107774324-107774343 MsG0680035538.01.T01:intron 35.0%
! CCCCCCAATTTAATGTTTTT+CGG + Chr6:107774343-107774324 None:intergenic 35.0%
! CTCTCATTTTCCTGTATTTG+TGG + Chr6:107781355-107781374 None:intergenic 35.0%
! GACAGACAAAACACTTTTGA+TGG - Chr6:107774048-107774067 MsG0680035538.01.T01:intron 35.0%
! GCTATCGCATTCTTTACTTT+TGG - Chr6:107779826-107779845 MsG0680035538.01.T01:intron 35.0%
! GGAGTAGTATTGAACACAAA+AGG + Chr6:107775705-107775724 None:intergenic 35.0%
! GTGTCGTTAATCCTAATGAA+GGG - Chr6:107776228-107776247 MsG0680035538.01.T01:intron 35.0%
! GTTGTTGTTGTTGTATCCAA+TGG - Chr6:107777938-107777957 MsG0680035538.01.T01:intron 35.0%
! TGTTGTTGTTGTATCCAATG+GGG - Chr6:107777940-107777959 MsG0680035538.01.T01:intron 35.0%
! TTCGGCAACTGAATTTGTTT+GGG + Chr6:107776695-107776714 None:intergenic 35.0%
! TTTCGGCAACTGAATTTGTT+TGG + Chr6:107776696-107776715 None:intergenic 35.0%
! TTTGCTATGCAAACTCTGTA+TGG + Chr6:107780475-107780494 None:intergenic 35.0%
!! AATTTTATGTGTTGGTGTCC+GGG - Chr6:107773091-107773110 MsG0680035538.01.T01:intron 35.0%
!! ACAGCTTTGAAATGGTTGTT+GGG - Chr6:107777511-107777530 MsG0680035538.01.T01:intron 35.0%
!! ACTCAAAATTTTGAAGGGGA+AGG + Chr6:107777455-107777474 None:intergenic 35.0%
!! AGTGTTGTTCTTTTGTTCCT+TGG - Chr6:107778920-107778939 MsG0680035538.01.T01:intron 35.0%
!! ATTGGTAACGGATTCTTCAT+AGG + Chr6:107772570-107772589 None:intergenic 35.0%
!! CTTTTTCTATCTTACCGGTT+AGG + Chr6:107780507-107780526 None:intergenic 35.0%
!! GTCTGTTTTATTGGCTATGT+TGG + Chr6:107773205-107773224 None:intergenic 35.0%
!! GTGAAGGGATTTTGAAAAAC+TGG + Chr6:107775905-107775924 None:intergenic 35.0%
!! GTTCTGTTAGTTTGTTATGG+TGG + Chr6:107775938-107775957 None:intergenic 35.0%
!! GTTTTATTGGCTATGTTGGA+TGG + Chr6:107773201-107773220 None:intergenic 35.0%
!! GTTTTGATGAGTGTCAAGTT+TGG - Chr6:107778263-107778282 MsG0680035538.01.T01:intron 35.0%
!! TAAATGGGACAGCTTTGAAA+TGG - Chr6:107777503-107777522 MsG0680035538.01.T01:intron 35.0%
!! TACTCAGGCAATATTTCTAG+AGG + Chr6:107779334-107779353 None:intergenic 35.0%
!! TGCTTTGAGAGTAGATTAGA+TGG + Chr6:107772946-107772965 None:intergenic 35.0%
!! TGGAAGTAATGGATAGTCAT+TGG + Chr6:107772588-107772607 None:intergenic 35.0%
!! TGTGTGTTTTTGCAAATGCA+AGG - Chr6:107778679-107778698 MsG0680035538.01.T01:intron 35.0%
!!! ATGTTGTTTTGGTAGATAGG+TGG - Chr6:107775559-107775578 MsG0680035538.01.T01:intron 35.0%
!!! GTTGATATTTTTTCCTCCCT+AGG - Chr6:107780553-107780572 MsG0680035538.01.T01:intron 35.0%
!!! TGATTTTTTATCCAAAGGGG+AGG - Chr6:107776471-107776490 MsG0680035538.01.T01:intron 35.0%
!!! TTCCGAGTTTTAAAATAGGG+GGG - Chr6:107775200-107775219 MsG0680035538.01.T01:intron 35.0%
!!! TTCCGAGTTTTAAAATAGGG+GGG + Chr6:107775219-107775200 None:intergenic 35.0%
AAAGAGAGTGAATCAGAAGG+AGG - Chr6:107777751-107777770 MsG0680035538.01.T01:intron 40.0%
AAAGTTAATGCTGTCCTCAC+TGG + Chr6:107772162-107772181 None:intergenic 40.0%
AAGAGAGTGAATCAGAAGGA+GGG - Chr6:107777752-107777771 MsG0680035538.01.T01:intron 40.0%
AAGTGTTTGAGCTTACCTTG+GGG - Chr6:107773650-107773669 MsG0680035538.01.T01:intron 40.0%
AATATTGCCTGAGTAGTGAG+TGG - Chr6:107779339-107779358 MsG0680035538.01.T01:intron 40.0%
AATCAGGCTCTCATTCACAA+GGG + Chr6:107780694-107780713 None:intergenic 40.0%
ACAAGCAAACCAAGATCGAA+AGG + Chr6:107781214-107781233 None:intergenic 40.0%
ACATATGTCGATGTCCAACA+CGG - Chr6:107777667-107777686 MsG0680035538.01.T01:intron 40.0%
ACTTAGTGTGGGATAAGACT+TGG - Chr6:107777916-107777935 MsG0680035538.01.T01:intron 40.0%
ACTTCTGTGTCTCAAACCTT+TGG - Chr6:107771955-107771974 MsG0680035538.01.T01:intron 40.0%
AGTCACATCATTATAGGCAG+AGG + Chr6:107772918-107772937 None:intergenic 40.0%
AGTCATACCAACTCTCAAGT+TGG + Chr6:107771882-107771901 None:intergenic 40.0%
ATAGAGGAACAAGGAAACGA+AGG + Chr6:107771918-107771937 None:intergenic 40.0%
ATTTGAGCGTGAATTGTGTG+TGG - Chr6:107778640-107778659 MsG0680035538.01.T01:intron 40.0%
CAAGTTTCGTCAATTCGATG+AGG - Chr6:107776129-107776148 MsG0680035538.01.T01:intron 40.0%
CATAGCCAATAAAACAGACC+AGG - Chr6:107773206-107773225 MsG0680035538.01.T01:CDS 40.0%
CATCATCAATATCCAGTCTC+GGG + Chr6:107779037-107779056 None:intergenic 40.0%
CCAAGACATTCGTATGAAAG+CGG - Chr6:107779667-107779686 MsG0680035538.01.T01:intron 40.0%
CGCTTTCATACGAATGTCTT+GGG + Chr6:107779669-107779688 None:intergenic 40.0%
CTGATTTCGCCATGAATTGT+AGG - Chr6:107772286-107772305 MsG0680035538.01.T01:intron 40.0%
GAGCGTAGTCACATCATTAT+AGG + Chr6:107773314-107773333 None:intergenic 40.0%
GAGGGTAGTCACATCATTAT+AGG + Chr6:107772924-107772943 None:intergenic 40.0%
GATGGAACTTTGTAGCAATG+AGG - Chr6:107777284-107777303 MsG0680035538.01.T01:CDS 40.0%
GGCTATGTTGGATGGTAATT+TGG + Chr6:107773193-107773212 None:intergenic 40.0%
GGTATTTCCACTGACATAGT+TGG - Chr6:107772755-107772774 MsG0680035538.01.T01:intron 40.0%
GTGCTCAAAGAGGATAAAAG+AGG + Chr6:107772250-107772269 None:intergenic 40.0%
GTTATCTTGTATGGCTCTTG+TGG - Chr6:107781020-107781039 MsG0680035538.01.T01:intron 40.0%
GTTCCATCATCTCAATACAG+CGG + Chr6:107777272-107777291 None:intergenic 40.0%
TAAAAGAGAAGCTTGGCCAA+AGG + Chr6:107771974-107771993 None:intergenic 40.0%
TAAGCTCAAACACTTAACGC+TGG + Chr6:107773645-107773664 None:intergenic 40.0%
TACACCAGGAAAAGGACAAA+AGG + Chr6:107781562-107781581 None:intergenic 40.0%
TAGCACTAAGTGCATTTCTG+AGG - Chr6:107776169-107776188 MsG0680035538.01.T01:intron 40.0%
TAGTGTCTAGACCTAGAGTA+GGG - Chr6:107777416-107777435 MsG0680035538.01.T01:intron 40.0%
TATCTTTGTTAAGCCTAGGG+AGG + Chr6:107780569-107780588 None:intergenic 40.0%
TCACACATATTGAGACAAGG+GGG - Chr6:107776570-107776589 MsG0680035538.01.T01:intron 40.0%
TCCGATTGAGTCAAAATAGG+GGG - Chr6:107775289-107775308 MsG0680035538.01.T01:intron 40.0%
TCCGATTGAGTCAAAATAGG+GGG + Chr6:107775308-107775289 None:intergenic 40.0%
TCTCATATACTCCCTACTCT+AGG + Chr6:107777430-107777449 None:intergenic 40.0%
TGCAAATTCGAAAACGGAGA+AGG - Chr6:107773506-107773525 MsG0680035538.01.T01:intron 40.0%
TGGAGAGTTTCACACTTGTT+GGG - Chr6:107778056-107778075 MsG0680035538.01.T01:intron 40.0%
TGTAGCAGAGGAAAGATAGA+GGG + Chr6:107781490-107781509 None:intergenic 40.0%
TGTCTGTATCTGTGCTTCAT+AGG + Chr6:107773021-107773040 None:intergenic 40.0%
TGTTCCTTTATATTTGGCCC+CGG - Chr6:107777224-107777243 MsG0680035538.01.T01:CDS 40.0%
TTAACAAAGCAACCAACTCC+AGG - Chr6:107781171-107781190 MsG0680035538.01.T01:intron 40.0%
TTAAGCTCCAACTATGTCAG+TGG + Chr6:107772765-107772784 None:intergenic 40.0%
TTACCTTGACAGTGATCTTG+TGG + Chr6:107776271-107776290 None:intergenic 40.0%
TTAGTGTCTAGACCTAGAGT+AGG - Chr6:107777415-107777434 MsG0680035538.01.T01:intron 40.0%
TTATGCTGAGCATGTGGAAT+CGG - Chr6:107778730-107778749 MsG0680035538.01.T01:intron 40.0%
TTCAATAGTCACAGTTGACG+GGG + Chr6:107778828-107778847 None:intergenic 40.0%
TTGGAGAGTTTCACACTTGT+TGG - Chr6:107778055-107778074 MsG0680035538.01.T01:intron 40.0%
TTGGATTGAATCGGAGAAGA+AGG + Chr6:107776012-107776031 None:intergenic 40.0%
TTGGTTTAAGCCCAACATCA+TGG - Chr6:107781596-107781615 MsG0680035538.01.T01:intron 40.0%
TTGTAGCAGAGGAAAGATAG+AGG + Chr6:107781491-107781510 None:intergenic 40.0%
TTTCACATGTCTTGGGATGA+TGG - Chr6:107777597-107777616 MsG0680035538.01.T01:intron 40.0%
TTTGCATTTACTGCACCTGA+GGG - Chr6:107778758-107778777 MsG0680035538.01.T01:intron 40.0%
! AAATGATTTTGGACACCTGC+CGG - Chr6:107779424-107779443 MsG0680035538.01.T01:intron 40.0%
! AAGTCTTATCCCACACTAAG+TGG + Chr6:107777917-107777936 None:intergenic 40.0%
! ACATCCTGAGCTACATTTTC+AGG + Chr6:107779709-107779728 None:intergenic 40.0%
! AGCATTTTCACCAACTGAGT+TGG - Chr6:107775594-107775613 MsG0680035538.01.T01:intron 40.0%
! AGTCTTATCCCACACTAAGT+GGG + Chr6:107777916-107777935 None:intergenic 40.0%
! ATCTTACCGGTTAGGTCTAA+GGG + Chr6:107780499-107780518 None:intergenic 40.0%
! CAGAAGTACATTACTTCGTC+AGG + Chr6:107773922-107773941 None:intergenic 40.0%
! CTTGAATCTGTTAGTGCTGA+TGG + Chr6:107772422-107772441 None:intergenic 40.0%
! GCATTTTCACCAACTGAGTT+GGG - Chr6:107775595-107775614 MsG0680035538.01.T01:intron 40.0%
! GGAGAGCAATTTCTAGAAGT+TGG - Chr6:107774089-107774108 MsG0680035538.01.T01:intron 40.0%
! GTTGGTGCTTAAAAACGTGT+TGG + Chr6:107772732-107772751 None:intergenic 40.0%
! GTTGTTGTTGTATCCAATGG+GGG - Chr6:107777941-107777960 MsG0680035538.01.T01:intron 40.0%
! TAACTTTTGACCTAGCATCG+TGG - Chr6:107772175-107772194 MsG0680035538.01.T01:CDS 40.0%
! TACTCCTTTTGTCCTTTTCC+TGG - Chr6:107781555-107781574 MsG0680035538.01.T01:intron 40.0%
! TATCTTACCGGTTAGGTCTA+AGG + Chr6:107780500-107780519 None:intergenic 40.0%
! TCGGCAACTGAATTTGTTTG+GGG + Chr6:107776694-107776713 None:intergenic 40.0%
! TTTCACACTTGTTGGGATGA+TGG - Chr6:107778063-107778082 MsG0680035538.01.T01:intron 40.0%
! TTTGTTGTGTTTGATGCCCA+AGG + Chr6:107773685-107773704 None:intergenic 40.0%
! TTTTGCATTTACTGCACCTG+AGG - Chr6:107778757-107778776 MsG0680035538.01.T01:intron 40.0%
!! AAGGAGTGTTTGTGCTTCAT+AGG - Chr6:107773127-107773146 MsG0680035538.01.T01:intron 40.0%
!! ACGTTTTTAAGCACCAACAG+TGG - Chr6:107772734-107772753 MsG0680035538.01.T01:intron 40.0%
!! ACTATGTAGCACTGACACAT+TGG - Chr6:107778539-107778558 MsG0680035538.01.T01:intron 40.0%
!! GACAGCTTTGAAATGGTTGT+TGG - Chr6:107777510-107777529 MsG0680035538.01.T01:intron 40.0%
!!! ACCCCCCCTATTTTAAAACT+CGG - Chr6:107774293-107774312 MsG0680035538.01.T01:intron 40.0%
!!! ACCCCCCCTATTTTAAAACT+CGG + Chr6:107774312-107774293 None:intergenic 40.0%
!!! TCCGAGTTTTAAAATAGGGG+GGG - Chr6:107775201-107775220 MsG0680035538.01.T01:intron 40.0%
!!! TCCGAGTTTTAAAATAGGGG+GGG + Chr6:107775220-107775201 None:intergenic 40.0%
AAATGTCCACTGCATGCTCT+TGG + Chr6:107772446-107772465 None:intergenic 45.0%
AACATATGATCACGACGTCC+CGG - Chr6:107774149-107774168 MsG0680035538.01.T01:intron 45.0%
AACTCCAGGATGTTCACCTT+CGG - Chr6:107781185-107781204 MsG0680035538.01.T01:intron 45.0%
AACTTTATCCAAAGGGGGAG+AGG - Chr6:107778396-107778415 MsG0680035538.01.T01:intron 45.0%
AAGATCAATGCGATGACCGT+TGG - Chr6:107776197-107776216 MsG0680035538.01.T01:intron 45.0%
AATAAATCCCTCTCCCCCTT+TGG + Chr6:107778407-107778426 None:intergenic 45.0%
AATAAATCTCCCTCCCCCAT+TGG + Chr6:107777957-107777976 None:intergenic 45.0%
ACAGTGATCTTGTGGCTATC+AGG + Chr6:107776263-107776282 None:intergenic 45.0%
ACTGTTCTGTGTTGTGCTGA+AGG + Chr6:107772480-107772499 None:intergenic 45.0%
ACTTTATCCAAAGGGGGAGA+GGG - Chr6:107778397-107778416 MsG0680035538.01.T01:intron 45.0%
AGAAACACCACTCACTACTC+AGG + Chr6:107779349-107779368 None:intergenic 45.0%
AGAGAGTGAATCAGAAGGAG+GGG - Chr6:107777753-107777772 MsG0680035538.01.T01:intron 45.0%
AGTAGATAGATCGCACTCAC+AGG - Chr6:107772083-107772102 MsG0680035538.01.T01:CDS 45.0%
ATCTTGTGGCTATCAGGAAG+AGG + Chr6:107776257-107776276 None:intergenic 45.0%
ATGCTGCAAACAAAGCCGTT+GGG + Chr6:107779277-107779296 None:intergenic 45.0%
ATGGAATGTATACCAGTGGC+AGG - Chr6:107774067-107774086 MsG0680035538.01.T01:intron 45.0%
ATGTTTAGGTCTCCTTCACC+GGG + Chr6:107774170-107774189 None:intergenic 45.0%
CAAGATCGAAAGGAAACCGA+AGG + Chr6:107781204-107781223 None:intergenic 45.0%
CAATCAGGCTCTCATTCACA+AGG + Chr6:107780695-107780714 None:intergenic 45.0%
CAGAGAGGGAAATTAGGGTT+TGG + Chr6:107776031-107776050 None:intergenic 45.0%
CATGTTTAGGTCTCCTTCAC+CGG + Chr6:107774171-107774190 None:intergenic 45.0%
CATTGGATTGAAGCCATGTC+TGG - Chr6:107778104-107778123 MsG0680035538.01.T01:intron 45.0%
CCGATTGAGTCAAAATAGGG+GGG - Chr6:107775290-107775309 MsG0680035538.01.T01:intron 45.0%
CCGATTGAGTCAAAATAGGG+GGG + Chr6:107775309-107775290 None:intergenic 45.0%
CCGCTTTCATACGAATGTCT+TGG + Chr6:107779670-107779689 None:intergenic 45.0%
CGATTGAGTCAAAATAGGGG+GGG - Chr6:107775291-107775310 MsG0680035538.01.T01:intron 45.0%
CGATTGAGTCAAAATAGGGG+GGG + Chr6:107775310-107775291 None:intergenic 45.0%
CTTCGGTTTCCTTTCGATCT+TGG - Chr6:107781202-107781221 MsG0680035538.01.T01:intron 45.0%
GACGAAACTTGTCAATGCGA+GGG + Chr6:107776120-107776139 None:intergenic 45.0%
GAGTTGCAAATGGATCCGTT+TGG + Chr6:107779312-107779331 None:intergenic 45.0%
GCAAACTCTGTATGGATCAC+AGG + Chr6:107780467-107780486 None:intergenic 45.0%
GCATCACTTAATAATCCGGC+AGG + Chr6:107779442-107779461 None:intergenic 45.0%
GCATTTCTTCCTCCCTGTAT+TGG + Chr6:107781145-107781164 None:intergenic 45.0%
GCTTCCTGAAAATGTAGCTC+AGG - Chr6:107779702-107779721 MsG0680035538.01.T01:intron 45.0%
GGAAGAGGATACCCTTCATT+AGG + Chr6:107776242-107776261 None:intergenic 45.0%
GGAAGGTTTACACCAGGAAA+AGG + Chr6:107781570-107781589 None:intergenic 45.0%
GGAGAGCGATGATATGCAAT+AGG + Chr6:107779218-107779237 None:intergenic 45.0%
GGCACTTAGAATCAGCTTAC+TGG + Chr6:107779983-107780002 None:intergenic 45.0%
GGGAGGAGGGTTTCTTAAAT+GGG - Chr6:107777488-107777507 MsG0680035538.01.T01:intron 45.0%
GGGATCAGAGAGGGAAATTA+GGG + Chr6:107776036-107776055 None:intergenic 45.0%
GGTGGTAACTAACAGGTGAA+GGG + Chr6:107775920-107775939 None:intergenic 45.0%
GTAGCAGAGGAAAGATAGAG+GGG + Chr6:107781489-107781508 None:intergenic 45.0%
GTATGTGTCGTGTCAGACAT+CGG + Chr6:107778578-107778597 None:intergenic 45.0%
GTCAGTGGAAATACCACTGT+TGG + Chr6:107772750-107772769 None:intergenic 45.0%
GTCTTATCCCACACTAAGTG+GGG + Chr6:107777915-107777934 None:intergenic 45.0%
GTGTAAACCTTCCACACTCT+TGG - Chr6:107781577-107781596 MsG0680035538.01.T01:intron 45.0%
TACTTCAACCTGCCCTTTCT+TGG + Chr6:107778897-107778916 None:intergenic 45.0%
TAGCCACAAGATCACTGTCA+AGG - Chr6:107776265-107776284 MsG0680035538.01.T01:intron 45.0%
TAGGCTTCCCAAATCACCAA+AGG - Chr6:107781430-107781449 MsG0680035538.01.T01:intron 45.0%
TATGCCGGGGCCAAATATAA+AGG + Chr6:107777231-107777250 None:intergenic 45.0%
TATGCTGAGCATGTGGAATC+GGG - Chr6:107778731-107778750 MsG0680035538.01.T01:intron 45.0%
TCCATTTGTCCAATACAGGG+AGG - Chr6:107781133-107781152 MsG0680035538.01.T01:intron 45.0%
TCCTCCCTGTATTGGACAAA+TGG + Chr6:107781137-107781156 None:intergenic 45.0%
TCCTTGAATTAGACGTGTCC+CGG + Chr6:107773112-107773131 None:intergenic 45.0%
TGACACGACACATACATGTG+TGG - Chr6:107778583-107778602 MsG0680035538.01.T01:intron 45.0%
TGACGAAACTTGTCAATGCG+AGG + Chr6:107776121-107776140 None:intergenic 45.0%
TGCTACCCCTTGTCAATGAA+GGG + Chr6:107776599-107776618 None:intergenic 45.0%
TGGAATGTATACCAGTGGCA+GGG - Chr6:107774068-107774087 MsG0680035538.01.T01:intron 45.0%
TGGGATCAGAGAGGGAAATT+AGG + Chr6:107776037-107776056 None:intergenic 45.0%
TGGTGGTAACTAACAGGTGA+AGG + Chr6:107775921-107775940 None:intergenic 45.0%
TGGTTGGCATAGCATAGCAA+AGG + Chr6:107780408-107780427 None:intergenic 45.0%
TGTCCTCACTGGAATAATCG+TGG + Chr6:107772151-107772170 None:intergenic 45.0%
TTCTGTTAGACGAGCGAATC+TGG - Chr6:107773937-107773956 MsG0680035538.01.T01:intron 45.0%
TTGAGAATCAACCTCCCCTT+TGG + Chr6:107776485-107776504 None:intergenic 45.0%
TTGCAAATGGATCCGTTTGG+CGG + Chr6:107779309-107779328 None:intergenic 45.0%
TTGCACGACACCGATATATG+TGG - Chr6:107777343-107777362 MsG0680035538.01.T01:intron 45.0%
TTGCTACCCCTTGTCAATGA+AGG + Chr6:107776600-107776619 None:intergenic 45.0%
TTGGATACCGAGTAGTAGGA+TGG - Chr6:107778802-107778821 MsG0680035538.01.T01:intron 45.0%
TTGGGAACAAGTGCTCAAAG+AGG + Chr6:107772260-107772279 None:intergenic 45.0%
TTGGGCTTAAACCAAGAGTG+TGG + Chr6:107781591-107781610 None:intergenic 45.0%
TTGTTGTATCCAATGGGGGA+GGG - Chr6:107777945-107777964 MsG0680035538.01.T01:intron 45.0%
! AGCATGCAGTGGACATTTTG+AGG - Chr6:107772448-107772467 MsG0680035538.01.T01:intron 45.0%
! AGGCTTTTGATAGAGCCCAA+CGG - Chr6:107779259-107779278 MsG0680035538.01.T01:intron 45.0%
! AGGGGAGGTTGATTCTCAAA+TGG - Chr6:107776486-107776505 MsG0680035538.01.T01:intron 45.0%
! GCTTAAACCAAGAGTGTGGA+AGG + Chr6:107781587-107781606 None:intergenic 45.0%
! GCTTTTGGATACCGAGTAGT+AGG - Chr6:107778798-107778817 MsG0680035538.01.T01:intron 45.0%
! GGGAGGTTGATTCTCAAATG+GGG - Chr6:107776488-107776507 MsG0680035538.01.T01:intron 45.0%
! GGGGAGGTTGATTCTCAAAT+GGG - Chr6:107776487-107776506 MsG0680035538.01.T01:intron 45.0%
! GGTCTAAGGTTGCCAAGAAA+GGG - Chr6:107778882-107778901 MsG0680035538.01.T01:intron 45.0%
! GTATGAAAGCGGCTAGTCAA+TGG - Chr6:107779678-107779697 MsG0680035538.01.T01:intron 45.0%
! GTTTCGCCTTTGGAAGTTGT+AGG - Chr6:107780013-107780032 MsG0680035538.01.T01:intron 45.0%
! TCTTACCGGTTAGGTCTAAG+GGG + Chr6:107780498-107780517 None:intergenic 45.0%
! TGGTCTAAGGTTGCCAAGAA+AGG - Chr6:107778881-107778900 MsG0680035538.01.T01:intron 45.0%
!! CTGTGGCTGGTTTACAACTA+TGG - Chr6:107781234-107781253 MsG0680035538.01.T01:intron 45.0%
!! GATCTTGGTTTGCTTGTCTG+TGG - Chr6:107781217-107781236 MsG0680035538.01.T01:intron 45.0%
!! GCACGATGGCTTGCATTTTT+AGG - Chr6:107772217-107772236 MsG0680035538.01.T01:intron 45.0%
!! GTGACTACACAGCTTGCTTT+TGG - Chr6:107778783-107778802 MsG0680035538.01.T01:intron 45.0%
!! TACTGCCAAAGACTGGTCTA+AGG - Chr6:107778868-107778887 MsG0680035538.01.T01:intron 45.0%
!! TCTGTTAGTGCTGATGGTGT+TGG + Chr6:107772416-107772435 None:intergenic 45.0%
!!! CCCCCCTATTTTGACTCAAT+CGG - Chr6:107774264-107774283 MsG0680035538.01.T01:intron 45.0%
!!! CCCCCCTATTTTGACTCAAT+CGG + Chr6:107774283-107774264 None:intergenic 45.0%
!! AATTTAAATAATTAATTAGA+TGG - Chr6:107775115-107775134 MsG0680035538.01.T01:intron 5.0%
!! TAAAAAAGAAAAATAAATAA+AGG + Chr6:107775815-107775834 None:intergenic 5.0%
!!! AAAAAATCAATTTTTTTTAA+AGG + Chr6:107776460-107776479 None:intergenic 5.0%
!!! AAAAATCAATTTTTTTTAAA+GGG + Chr6:107776459-107776478 None:intergenic 5.0%
!!! TTTATTTTGATTATATTTTA+AGG + Chr6:107775333-107775352 None:intergenic 5.0%
AAGAAACCCTCCTCCCCTTT+CGG + Chr6:107777484-107777503 None:intergenic 50.0%
ACAAGCGTGCATCTGATGTC+TGG + Chr6:107772062-107772081 None:intergenic 50.0%
ACACTTGTGGTAGGCTTAGG+TGG - Chr6:107777690-107777709 MsG0680035538.01.T01:intron 50.0%
ACTAAGTGGGGTCAACTGCA+TGG + Chr6:107777903-107777922 None:intergenic 50.0%
AGTGAAGTGGGCCATGATGT+TGG + Chr6:107781610-107781629 None:intergenic 50.0%
ATGTCCAACACGGACACTTG+TGG - Chr6:107777677-107777696 MsG0680035538.01.T01:intron 50.0%
CACAAAGTGCACCGAATGAG+AGG - Chr6:107772651-107772670 MsG0680035538.01.T01:intron 50.0%
CAGTTGACCCCACTTAGTGT+GGG - Chr6:107777905-107777924 MsG0680035538.01.T01:intron 50.0%
CATGCTGCAAACAAAGCCGT+TGG + Chr6:107779278-107779297 None:intergenic 50.0%
CATGTAGTCAACCCGCCAAA+CGG - Chr6:107779294-107779313 MsG0680035538.01.T01:intron 50.0%
CATGTCTGAAGGCAACACCA+AGG + Chr6:107778940-107778959 None:intergenic 50.0%
CTTTATCCGAAAGGGGAGGA+GGG - Chr6:107777475-107777494 MsG0680035538.01.T01:intron 50.0%
GAAACCGAAGGTGAACATCC+TGG + Chr6:107781192-107781211 None:intergenic 50.0%
GAAGGTGAACATCCTGGAGT+TGG + Chr6:107781186-107781205 None:intergenic 50.0%
GAGTCTTTATCCGAAAGGGG+AGG - Chr6:107777471-107777490 MsG0680035538.01.T01:intron 50.0%
GAGTGTGGAAGGTTTACACC+AGG + Chr6:107781576-107781595 None:intergenic 50.0%
GATAGATCGCACTCACAGGT+TGG - Chr6:107772087-107772106 MsG0680035538.01.T01:CDS 50.0%
GCAAACCCCTTAGACCTAAC+CGG - Chr6:107780490-107780509 MsG0680035538.01.T01:intron 50.0%
GCATATCATCGCTCTCCGAA+TGG - Chr6:107779221-107779240 MsG0680035538.01.T01:intron 50.0%
GGCAACCTTAGACCAGTCTT+TGG + Chr6:107778876-107778895 None:intergenic 50.0%
GGGGAGGAGGGTTTCTTAAA+TGG - Chr6:107777487-107777506 MsG0680035538.01.T01:intron 50.0%
GGGTAGCCCTTCATTGACAA+GGG - Chr6:107776590-107776609 MsG0680035538.01.T01:intron 50.0%
GGTAGCCCTTCATTGACAAG+GGG - Chr6:107776591-107776610 MsG0680035538.01.T01:intron 50.0%
GTCGTGTAAGACACCAGACA+TGG + Chr6:107778120-107778139 None:intergenic 50.0%
GTGAAGTGGGCCATGATGTT+GGG + Chr6:107781609-107781628 None:intergenic 50.0%
GTGCCACGATTATTCCAGTG+AGG - Chr6:107772145-107772164 MsG0680035538.01.T01:CDS 50.0%
GTGGAGTTACTGCCAAAGAC+TGG - Chr6:107778861-107778880 MsG0680035538.01.T01:intron 50.0%
GTGGTAGGCTTAGGTGGTTT+GGG - Chr6:107777696-107777715 MsG0680035538.01.T01:intron 50.0%
GTTGTTGTATCCAATGGGGG+AGG - Chr6:107777944-107777963 MsG0680035538.01.T01:intron 50.0%
TAAGGTTGCCAAGAAAGGGC+AGG - Chr6:107778886-107778905 MsG0680035538.01.T01:intron 50.0%
TCACAAGGGTGGATGAGCAA+AGG + Chr6:107780680-107780699 None:intergenic 50.0%
TCCAATGTGTCAGTGCCACA+CGG + Chr6:107778091-107778110 None:intergenic 50.0%
TCCGGGACACGTCTAATTCA+AGG - Chr6:107773108-107773127 MsG0680035538.01.T01:intron 50.0%
TCGCCGCTGTATTGAGATGA+TGG - Chr6:107777266-107777285 MsG0680035538.01.T01:CDS 50.0%
TCTAGGTCTTGCTCTACCTC+TGG + Chr6:107777789-107777808 None:intergenic 50.0%
TCTTTATCCGAAAGGGGAGG+AGG - Chr6:107777474-107777493 MsG0680035538.01.T01:intron 50.0%
TGAGCGTGAATTGTGTGTGG+AGG - Chr6:107778643-107778662 MsG0680035538.01.T01:intron 50.0%
TGATCTTGTGGGGTCACCTT+TGG + Chr6:107781449-107781468 None:intergenic 50.0%
TGCAAATGGATCCGTTTGGC+GGG + Chr6:107779308-107779327 None:intergenic 50.0%
TGTGGTAGGCTTAGGTGGTT+TGG - Chr6:107777695-107777714 MsG0680035538.01.T01:intron 50.0%
TTACACGACGCAAGCACATG+TGG - Chr6:107778131-107778150 MsG0680035538.01.T01:intron 50.0%
TTGGGAAGCCTACGTGCTTA+GGG + Chr6:107781422-107781441 None:intergenic 50.0%
TTGTATGGCTCTTGTGGGAG+TGG - Chr6:107781026-107781045 MsG0680035538.01.T01:intron 50.0%
TTTGGGAAGCCTACGTGCTT+AGG + Chr6:107781423-107781442 None:intergenic 50.0%
! CTTGGGGTATCAAACGCCTT+GGG - Chr6:107773666-107773685 MsG0680035538.01.T01:intron 50.0%
! GGGGTCACCTTTGGTGATTT+GGG + Chr6:107781440-107781459 None:intergenic 50.0%
! TCAAGTCCAAGAGCATGCAG+TGG - Chr6:107772437-107772456 MsG0680035538.01.T01:intron 50.0%
! TGGGGTCACCTTTGGTGATT+TGG + Chr6:107781441-107781460 None:intergenic 50.0%
!! AATGGGAAGCTTGCTGCCAA+TGG - Chr6:107779067-107779086 MsG0680035538.01.T01:intron 50.0%
!! CCTCGATTTGGGATCAGAGA+GGG + Chr6:107776045-107776064 None:intergenic 50.0%
!! TCCTCGATTTGGGATCAGAG+AGG + Chr6:107776046-107776065 None:intergenic 50.0%
!! TTGGTTTGCTTGTCTGTGGC+TGG - Chr6:107781221-107781240 MsG0680035538.01.T01:intron 50.0%
AACGCACTATCGTGGCACGT+TGG - Chr6:107772113-107772132 MsG0680035538.01.T01:CDS 55.0%
AAGCAACGTGCCACGATGCT+AGG + Chr6:107772188-107772207 None:intergenic 55.0%
AAGCCTACGTGCTTAGGGAC+TGG + Chr6:107781417-107781436 None:intergenic 55.0%
ACTGTACCATCGTGCCACGT+TGG - Chr6:107772018-107772037 MsG0680035538.01.T01:intron 55.0%
CAGGCTCTCATTCACAAGGG+TGG + Chr6:107780691-107780710 None:intergenic 55.0%
CCAACACGGACACTTGTGGT+AGG - Chr6:107777681-107777700 MsG0680035538.01.T01:intron 55.0%
CCCTCTCTGATCCCAAATCG+AGG - Chr6:107776042-107776061 MsG0680035538.01.T01:intron 55.0%
CCTACCACAAGTGTCCGTGT+TGG + Chr6:107777684-107777703 None:intergenic 55.0%
CGGACACTTGTGGTAGGCTT+AGG - Chr6:107777687-107777706 MsG0680035538.01.T01:intron 55.0%
CTACCAGTCCCTAAGCACGT+AGG - Chr6:107781411-107781430 MsG0680035538.01.T01:intron 55.0%
GAAATTGCTCTCCCTGCCAC+TGG + Chr6:107774082-107774101 None:intergenic 55.0%
GAGGGGAGTCAAATCACCAG+AGG - Chr6:107777770-107777789 MsG0680035538.01.T01:intron 55.0%
GCAGAGGAAAGATAGAGGGG+AGG + Chr6:107781486-107781505 None:intergenic 55.0%
GCAGTTGACCCCACTTAGTG+TGG - Chr6:107777904-107777923 MsG0680035538.01.T01:intron 55.0%
GCATTTACTGCACCTGAGGG+TGG - Chr6:107778761-107778780 MsG0680035538.01.T01:intron 55.0%
GCCACAATGACTCACCAACG+TGG + Chr6:107772035-107772054 None:intergenic 55.0%
GGCACGATGGTACAGTCTGT+TGG + Chr6:107772014-107772033 None:intergenic 55.0%
GGGGTAGCCCTTCATTGACA+AGG - Chr6:107776589-107776608 MsG0680035538.01.T01:intron 55.0%
GTCGTGTCAGACATCGGACA+CGG + Chr6:107778572-107778591 None:intergenic 55.0%
GTTGGCAGAACGCACTATCG+TGG - Chr6:107772105-107772124 MsG0680035538.01.T01:CDS 55.0%
TACGTAGCTAGTCCCGAGAC+TGG - Chr6:107779022-107779041 MsG0680035538.01.T01:intron 55.0%
TAGCATCGTGGCACGTTGCT+TGG - Chr6:107772187-107772206 MsG0680035538.01.T01:CDS 55.0%
! CCAAGGCGTTTGATACCCCA+AGG + Chr6:107773668-107773687 None:intergenic 55.0%
! CCTTGGGGTATCAAACGCCT+TGG - Chr6:107773665-107773684 MsG0680035538.01.T01:intron 55.0%
! GCCACGTTGGTGAGTCATTG+TGG - Chr6:107772031-107772050 MsG0680035538.01.T01:intron 55.0%
! GGTGTCGTGCAACATGTGTC+GGG + Chr6:107777335-107777354 None:intergenic 55.0%
!! ACCGTGTGGCACTGACACAT+TGG - Chr6:107778087-107778106 MsG0680035538.01.T01:intron 55.0%
!! CGGTGTCGTGCAACATGTGT+CGG + Chr6:107777336-107777355 None:intergenic 55.0%
!! GTTGGGATGATGGAACCGTG+TGG - Chr6:107778073-107778092 MsG0680035538.01.T01:intron 55.0%
GACGGGGCCATCCTACTACT+CGG + Chr6:107778812-107778831 None:intergenic 60.0%
GACTCACCAACGTGGCACGA+TGG + Chr6:107772027-107772046 None:intergenic 60.0%
GCTGTGTAGTCACCACCCTC+AGG + Chr6:107778776-107778795 None:intergenic 60.0%
TGATCACGACGTCCCGGTGA+AGG - Chr6:107774155-107774174 MsG0680035538.01.T01:intron 60.0%
TGCTTGGCTTCGTGGCACGA+TGG - Chr6:107772203-107772222 MsG0680035538.01.T01:CDS 60.0%
TGGCACGTTGCTTGGCTTCG+TGG - Chr6:107772195-107772214 MsG0680035538.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 107771671 107781706 107771671 ID=MsG0680035538.01;Name=MsG0680035538.01
Chr6 mRNA 107771671 107781706 107771671 ID=MsG0680035538.01.T01;Parent=MsG0680035538.01;Name=MsG0680035538.01.T01;_AED=0.45;_eAED=0.50;_QI=0|0|0|0.85|0.33|0.14|7|0|403
Chr6 exon 107781704 107781706 107781704 ID=MsG0680035538.01.T01:exon:16647;Parent=MsG0680035538.01.T01
Chr6 exon 107780642 107781006 107780642 ID=MsG0680035538.01.T01:exon:16648;Parent=MsG0680035538.01.T01
Chr6 exon 107777091 107777313 107777091 ID=MsG0680035538.01.T01:exon:16649;Parent=MsG0680035538.01.T01
Chr6 exon 107774353 107774676 107774353 ID=MsG0680035538.01.T01:exon:16650;Parent=MsG0680035538.01.T01
Chr6 exon 107773153 107773229 107773153 ID=MsG0680035538.01.T01:exon:16651;Parent=MsG0680035538.01.T01
Chr6 exon 107772040 107772226 107772040 ID=MsG0680035538.01.T01:exon:16652;Parent=MsG0680035538.01.T01
Chr6 exon 107771671 107771703 107771671 ID=MsG0680035538.01.T01:exon:16653;Parent=MsG0680035538.01.T01
Chr6 CDS 107781704 107781706 107781704 ID=MsG0680035538.01.T01:cds;Parent=MsG0680035538.01.T01
Chr6 CDS 107780642 107781006 107780642 ID=MsG0680035538.01.T01:cds;Parent=MsG0680035538.01.T01
Chr6 CDS 107777091 107777313 107777091 ID=MsG0680035538.01.T01:cds;Parent=MsG0680035538.01.T01
Chr6 CDS 107774353 107774676 107774353 ID=MsG0680035538.01.T01:cds;Parent=MsG0680035538.01.T01
Chr6 CDS 107773153 107773229 107773153 ID=MsG0680035538.01.T01:cds;Parent=MsG0680035538.01.T01
Chr6 CDS 107772040 107772226 107772040 ID=MsG0680035538.01.T01:cds;Parent=MsG0680035538.01.T01
Chr6 CDS 107771671 107771703 107771671 ID=MsG0680035538.01.T01:cds;Parent=MsG0680035538.01.T01
Gene Sequence

>MsG0680035538.01.T01

ATGACAGTCATCACATACTCAAAGAAAGAAAACTGCAAAGAATCACCAACACCATCAGCACTAACAGATTCAAGTCCAAGAGCATGCAGTGGACATTTTGAGGATTGTTCCTTCAGCACAACACAGAACAGTCCCTATTACTACTCAGCTGTTTCAAGAGTAGATAATTCAAAGCTTCCTTTTGCTTTCACTAGACAATCCTATGAAGAATCCGTTACCAATGACTATCCATTACTTCCAAATTACATGGCTAACACAGAATCATCAAGCGCTAAAGTCAGATCACAAAGTGCACCGAATGAGAGGTCTAACATAAACTCATTTACTTGTTTGCTACACAAATTCTTAAAATCAGAATATTCCAACACGAATATCAAAATCGCAGCAATGTCAAATTCGATTCTTCTTCAAGCAATTCTCACCCTCGCATTGACAAGTTTCGTCAATTCGATGAGGTTTGATCTTCAAATGGGTAGCACTAAGTGCATTTCTGAGGATATTAAGATCAATGCGATGACCGTTGGAAAGTATAGTGTCGTTAATCCTAATGAAGGGTATCCTCTTCCTGATAGCCACAAGATCACTGTCAAGGCGAGTTCTCCTCATTCAAACACTAATCATTATGCTGAGCATGTGGAATCGGGAAATTTTGCATTTACTGCACCTGAGGGTGGTGACTACACAGCTTGCTTTTGGATACCGAGTAGTAGGATGGCCCCGTCAACTGTGACTATTGAATTTGAATGGAGAAGTGGAGTTACTGCCAAAGACTGGTCTAAGGTTGCCAAGAAAGGGCAGGTTGAAGTAAGTAGTGTTGTTCTTTTGTTCCTTGGTGTTGCCTTCAGACATGTATTATTGGTATTTTGTTATTGCATTTTACCTTTGTCTGTGATGTGCTTTATTGCAAATAGTTACATAATGGAATTTGAGTTGAAGAAGCTGTATGATGCTGTTTCATCCATCCATGACGAGATGTTTTATCTTCGTGAAAGGGAGGAAGAAATGCAAGATCTTAACAAAGCAACCAACTCCAGGATGTTCACCTTCGGTTTCCTTTCGATCTTGGTTTGCTTGTCTGTGGCTGGTTTACAACTATGGCATTTGAAGATGATGGGTTTAAGAGAACAAGCAAAAGAAATGAACAGAGAATTTAATGAAAAGATGATGGATTATCAGATTAAGACATTCTTTGAGAGGAAGAAGCTCCTCTAA
Protein sequence

>MsG0680035538.01.T01

MTVITYSKKENCKESPTPSALTDSSPRACSGHFEDCSFSTTQNSPYYYSAVSRVDNSKLPFAFTRQSYEESVTNDYPLLPNYMANTESSSAKVRSQSAPNERSNINSFTCLLHKFLKSEYSNTNIKIAAMSNSILLQAILTLALTSFVNSMRFDLQMGSTKCISEDIKINAMTVGKYSVVNPNEGYPLPDSHKITVKASSPHSNTNHYAEHVESGNFAFTAPEGGDYTACFWIPSSRMAPSTVTIEFEWRSGVTAKDWSKVAKKGQVEVSSVVLLFLGVAFRHVLLVFCYCILPLSVMCFIANSYIMEFELKKLYDAVSSIHDEMFYLREREEEMQDLNKATNSRMFTFGFLSILVCLSVAGLQLWHLKMMGLREQAKEMNREFNEKMMDYQIKTFFERKKLL*