AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036337.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036337.01.T01 MTR_7g011490 95.775 213 8 1 1 213 1 212 1.14e-154 427
MsG0780036337.01.T01 MTR_6g012770 69.072 194 59 1 21 213 19 212 1.11e-101 293
MsG0780036337.01.T01 MTR_4g082315 67.016 191 63 0 23 213 26 216 2.73e-98 285
MsG0780036337.01.T01 MTR_5g042260 49.524 210 104 2 6 213 10 219 2.69e-71 216
MsG0780036337.01.T01 MTR_5g042320 46.226 212 109 3 6 213 13 223 1.48e-66 204
MsG0780036337.01.T01 MTR_5g042270 48.168 191 92 2 24 213 1 185 1.10e-56 178
MsG0780036337.01.T01 MTR_2g007210 36.893 206 126 2 8 213 5 206 3.90e-48 157
MsG0780036337.01.T01 MTR_3g072600 36.538 208 127 3 7 213 14 217 4.38e-48 157
MsG0780036337.01.T01 MTR_5g042320 44.199 181 94 5 6 181 13 191 5.36e-47 154
MsG0780036337.01.T01 MTR_5g058140 36.126 191 116 2 23 213 28 212 1.41e-46 153
MsG0780036337.01.T01 MTR_8g088940 39.796 196 105 3 23 213 24 211 1.39e-43 145
MsG0780036337.01.T01 MTR_8g088980 43.836 146 81 1 69 213 17 162 6.04e-41 137
MsG0780036337.01.T01 MTR_5g042300 39.837 123 60 1 91 213 40 148 9.41e-25 95.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036337.01.T01 AT1G26690 53.810 210 97 0 4 213 5 214 9.02e-87 255
MsG0780036337.01.T01 AT1G14010 53.555 211 94 1 3 213 6 212 2.79e-85 251
MsG0780036337.01.T01 AT1G69460 50.725 207 102 0 7 213 8 214 6.31e-81 241
MsG0780036337.01.T01 AT2G03290 55.729 192 84 1 23 213 22 213 1.34e-80 239
MsG0780036337.01.T01 AT3G29070 53.927 191 88 0 23 213 35 225 2.88e-73 221
MsG0780036337.01.T01 AT2G03040 53.103 145 67 1 23 166 22 166 1.91e-54 172
MsG0780036337.01.T01 AT1G09580 38.571 210 119 5 7 213 15 217 7.93e-47 154
MsG0780036337.01.T01 AT1G21900 39.037 187 106 3 30 213 35 216 2.34e-42 142
MsG0780036337.01.T01 AT1G57620 35.714 210 125 5 7 213 10 212 5.69e-41 139
MsG0780036337.01.T01 AT3G10780 29.949 197 131 2 21 213 24 217 1.86e-27 104

Find 38 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCAGCTTCGTTCACCTTA+TGG 0.200526 7:+6649592 MsG0780036337.01.T01:intron
TTTGGTGATCGTGTGGCTTC+TGG 0.257240 7:+6649628 MsG0780036337.01.T01:CDS
ATTATTTGCTTGTCTGTTGC+TGG 0.301166 7:+6650581 MsG0780036337.01.T01:CDS
ATCAGCTTCGTTCACCTTAT+GGG 0.316966 7:+6649593 MsG0780036337.01.T01:intron
GATTTCCTCAACGATACATT+TGG 0.317482 7:-6648352 None:intergenic
ATGCGGTTTGATCTTAAATC+TGG 0.328711 7:+6648324 MsG0780036337.01.T01:CDS
GGAATTGGATAACCTTCATT+TGG 0.331782 7:-6648417 None:intergenic
AAATCGATGGTCACAGTTAT+CGG 0.364267 7:-6649721 None:intergenic
ACAGTTAGCTTGTGAGAATC+AGG 0.392498 7:-6648438 None:intergenic
AATCGATGGTCACAGTTATC+GGG 0.403999 7:-6649720 None:intergenic
ATTTCCTCAACGATACATTT+GGG 0.406853 7:-6648351 None:intergenic
AGCTTGTGAGAATCAGGAAT+TGG 0.424933 7:-6648432 None:intergenic
ATTCTCACAAGCTAACTGTC+AGG 0.467963 7:+6648442 MsG0780036337.01.T01:CDS
GAGAACTGGGGTGGCTGCCA+AGG 0.468086 7:+6649750 MsG0780036337.01.T01:CDS
CTGTTGCTGGTTTGCAACTG+TGG 0.468942 7:+6650594 MsG0780036337.01.T01:CDS
AAGTGGTGTTTGTTCCCATA+AGG 0.469517 7:-6649607 None:intergenic
TGCAATCTTATACCAGTCCT+TGG 0.482528 7:-6649767 None:intergenic
TCCGTCGTTAATCCAAATGA+AGG 0.487043 7:+6648405 MsG0780036337.01.T01:CDS
CTGGGGTGGCTGCCAAGGAC+TGG 0.492180 7:+6649755 MsG0780036337.01.T01:CDS
TATGGGAACAAACACCACTT+TGG 0.513424 7:+6649610 MsG0780036337.01.T01:CDS
GCATTTACTACAGCTGAAGC+TGG 0.530155 7:+6649658 MsG0780036337.01.T01:CDS
ACAACGTTACACATCAATGC+AGG 0.530161 7:-6648294 None:intergenic
ATTTGAAAATATTCTTTGAG+AGG 0.543005 7:+6650618 MsG0780036337.01.T01:CDS
AATGATTGAACAGAAAATGA+AGG 0.543431 7:-6650561 None:intergenic
ATCGATGGTCACAGTTATCG+GGG 0.588769 7:-6649719 None:intergenic
AAGAGCAATGCAATGACCGT+TGG 0.588876 7:+6648375 MsG0780036337.01.T01:CDS
ACACCACTTTGGTGATCGTG+TGG 0.602617 7:+6649621 MsG0780036337.01.T01:CDS
ACCTTCATTTGGATTAACGA+CGG 0.603987 7:-6648406 None:intergenic
TTCTCACAAGCTAACTGTCA+GGG 0.622667 7:+6648443 MsG0780036337.01.T01:CDS
AGTTCTCCACTCAAAATCGA+TGG 0.628576 7:-6649734 None:intergenic
AAGCCACACGATCACCAAAG+TGG 0.649389 7:-6649624 None:intergenic
CAACGTTACACATCAATGCA+GGG 0.656506 7:-6648293 None:intergenic
TAATCCCAAATGTATCGTTG+AGG 0.664948 7:+6648347 MsG0780036337.01.T01:CDS
TCGATGGTCACAGTTATCGG+GGG 0.685619 7:-6649718 None:intergenic
TAATGGAATCTGAATTACAG+AGG 0.700092 7:+6650314 MsG0780036337.01.T01:CDS
AACGACGGAGTAATTACCAA+CGG 0.705542 7:-6648391 None:intergenic
GAAGATAAAACATCTCGTCG+TGG 0.753713 7:-6650360 None:intergenic
GTAACGTTGTGAATTCAATG+CGG 0.832460 7:+6648307 MsG0780036337.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATAAAATTACTAATAAAAG+AGG + Chr7:6648888-6648907 MsG0780036337.01.T01:intron 15.0%
!! TTGAATGTAATTATATATGT+TGG + Chr7:6648552-6648571 MsG0780036337.01.T01:intron 15.0%
!!! ATGCATTTTAATTTCAAATT+TGG + Chr7:6648690-6648709 MsG0780036337.01.T01:intron 15.0%
!!! CTCTTTTATTAGTAATTTTA+TGG - Chr7:6648890-6648909 None:intergenic 15.0%
!!! TTTTTTTTTTTTTCCATCTT+AGG + Chr7:6650291-6650310 MsG0780036337.01.T01:intron 15.0%
!! ATCATATTATGTCTTAATTC+AGG - Chr7:6649989-6650008 None:intergenic 20.0%
!! ATTTGAAAATATTCTTTGAG+AGG + Chr7:6650618-6650637 MsG0780036337.01.T01:CDS 20.0%
!! GATAATTACATTTGTAAATC+AGG - Chr7:6650237-6650256 None:intergenic 20.0%
!! TAAGTAAAAGTCATTCATAA+AGG - Chr7:6650474-6650493 None:intergenic 20.0%
!! TTTGCAAATTTAATACGTTT+AGG + Chr7:6648924-6648943 MsG0780036337.01.T01:intron 20.0%
!!! AATTTTCTGAATATCAAATG+GGG + Chr7:6649175-6649194 MsG0780036337.01.T01:intron 20.0%
!!! ACTTTTTTCACATTTGTTAT+AGG + Chr7:6650206-6650225 MsG0780036337.01.T01:intron 20.0%
!!! CCATTTTCTTAAATTACTAT+CGG - Chr7:6648527-6648546 None:intergenic 20.0%
!!! CTTTTTTCACATTTGTTATA+GGG + Chr7:6650207-6650226 MsG0780036337.01.T01:intron 20.0%
!!! GAATTTTCTGAATATCAAAT+GGG + Chr7:6649174-6649193 MsG0780036337.01.T01:intron 20.0%
!!! TATGTTAATTTGTGTTCATT+TGG + Chr7:6649139-6649158 MsG0780036337.01.T01:intron 20.0%
!!! TCAAATGACTCATTTTATAT+TGG + Chr7:6649549-6649568 MsG0780036337.01.T01:intron 20.0%
!!! TGAATTTTCTGAATATCAAA+TGG + Chr7:6649173-6649192 MsG0780036337.01.T01:intron 20.0%
! AAGAACAATTCAAATTCCAA+TGG + Chr7:6649087-6649106 MsG0780036337.01.T01:intron 25.0%
! AATAAATTTCTACTTCTGGA+AGG - Chr7:6649265-6649284 None:intergenic 25.0%
! AATGATTGAACAGAAAATGA+AGG - Chr7:6650564-6650583 None:intergenic 25.0%
! CCGATAGTAATTTAAGAAAA+TGG + Chr7:6648524-6648543 MsG0780036337.01.T01:intron 25.0%
! TATTATGTCTTAATTCAGGT+TGG - Chr7:6649985-6650004 None:intergenic 25.0%
! TCAGTTTAGAAAATGCAAAA+TGG - Chr7:6650070-6650089 None:intergenic 25.0%
! TTAAATTTGCAAACACATTC+CGG - Chr7:6648917-6648936 None:intergenic 25.0%
! TTATGATGATCTATGAAACA+CGG + Chr7:6648478-6648497 MsG0780036337.01.T01:intron 25.0%
! TTATGGACTTAATTGATCAA+CGG - Chr7:6648873-6648892 None:intergenic 25.0%
!! AGACAACTTTAGTTTAGTAT+TGG + Chr7:6648667-6648686 MsG0780036337.01.T01:intron 25.0%
!! GAATATCTAAAACATGTTTG+AGG - Chr7:6648828-6648847 None:intergenic 25.0%
!!! AAACTTTATTTCCACCATTT+TGG + Chr7:6648713-6648732 MsG0780036337.01.T01:intron 25.0%
!!! AATATATGAGTTGAGTTTTG+AGG + Chr7:6649350-6649369 MsG0780036337.01.T01:intron 25.0%
!!! ATTAACTTGTCTTATTCTGT+TGG + Chr7:6649954-6649973 MsG0780036337.01.T01:intron 25.0%
!!! TTACTAATAAAAGAGGTATC+CGG + Chr7:6648895-6648914 MsG0780036337.01.T01:intron 25.0%
!!! TTTGAACAATTTTCAAGTAC+CGG - Chr7:6649217-6649236 None:intergenic 25.0%
!!! TTTTTTTCCATCTTAGGTAA+TGG + Chr7:6650297-6650316 MsG0780036337.01.T01:intron 25.0%
ACCTTAAGACTTCCATAAAA+GGG - Chr7:6649050-6649069 None:intergenic 30.0%
ATTTCCTCAACGATACATTT+GGG - Chr7:6648354-6648373 None:intergenic 30.0%
CTAAACTAAAGTTGTCTGAT+TGG - Chr7:6648664-6648683 None:intergenic 30.0%
GCTATTCTCTTCTTGTAATA+AGG + Chr7:6649114-6649133 MsG0780036337.01.T01:intron 30.0%
GGACAATAAATTTCTACTTC+TGG - Chr7:6649269-6649288 None:intergenic 30.0%
TAATGGAATCTGAATTACAG+AGG + Chr7:6650314-6650333 MsG0780036337.01.T01:CDS 30.0%
TACCTTAAGACTTCCATAAA+AGG - Chr7:6649051-6649070 None:intergenic 30.0%
TATCACATCATTTGATCTTC+TGG + Chr7:6650400-6650419 MsG0780036337.01.T01:intron 30.0%
TCTAAACTGAATGCTTGATA+AGG + Chr7:6650080-6650099 MsG0780036337.01.T01:intron 30.0%
TCTTAAATATTGACACGTGT+TGG + Chr7:6648591-6648610 MsG0780036337.01.T01:intron 30.0%
! ACTTACATTTTCCTTGATAC+AGG + Chr7:6650489-6650508 MsG0780036337.01.T01:intron 30.0%
! CTTACATTTTCCTTGATACA+GGG + Chr7:6650490-6650509 MsG0780036337.01.T01:intron 30.0%
! TGTCTCGTATATAGTCATTT+TGG + Chr7:6648801-6648820 MsG0780036337.01.T01:intron 30.0%
!! GCAAAATGGAAATCACTTTT+AGG - Chr7:6650056-6650075 None:intergenic 30.0%
!! GTTTCTAAGACATTGCAATA+AGG + Chr7:6649424-6649443 MsG0780036337.01.T01:intron 30.0%
!! TTTATTTCCACCATTTTGGT+TGG + Chr7:6648717-6648736 MsG0780036337.01.T01:intron 30.0%
!!! TTGGTTTTGTATAATGTGTC+TGG + Chr7:6649568-6649587 MsG0780036337.01.T01:intron 30.0%
AAATCGATGGTCACAGTTAT+CGG - Chr7:6649724-6649743 None:intergenic 35.0%
ACCTTCATTTGGATTAACGA+CGG - Chr7:6648409-6648428 None:intergenic 35.0%
AGTTACACTTCCAACCAAAA+TGG - Chr7:6648730-6648749 None:intergenic 35.0%
ATGCGGTTTGATCTTAAATC+TGG + Chr7:6648324-6648343 MsG0780036337.01.T01:CDS 35.0%
ATTATTTGCTTGTCTGTTGC+TGG + Chr7:6650581-6650600 MsG0780036337.01.T01:CDS 35.0%
CAGAAAAAGAGATACGTGAT+AGG - Chr7:6650019-6650038 None:intergenic 35.0%
GAAGAGAATAGCTAATCCAT+TGG - Chr7:6649106-6649125 None:intergenic 35.0%
GAAGGTGACTTTATCATTGT+CGG + Chr7:6649308-6649327 MsG0780036337.01.T01:intron 35.0%
GATTTCCTCAACGATACATT+TGG - Chr7:6648355-6648374 None:intergenic 35.0%
GGAATTGGATAACCTTCATT+TGG - Chr7:6648420-6648439 None:intergenic 35.0%
GTAACGTTGTGAATTCAATG+CGG + Chr7:6648307-6648326 MsG0780036337.01.T01:CDS 35.0%
TAATCCCAAATGTATCGTTG+AGG + Chr7:6648347-6648366 MsG0780036337.01.T01:CDS 35.0%
TCAGATTCCATTACCTAAGA+TGG - Chr7:6650307-6650326 None:intergenic 35.0%
TCATAGACACTTCTTATCGA+AGG - Chr7:6648629-6648648 None:intergenic 35.0%
TGATCTTATCCTATCAGTCA+CGG - Chr7:6649930-6649949 None:intergenic 35.0%
TTCCAAATTGACATGAACCA+TGG + Chr7:6649399-6649418 MsG0780036337.01.T01:intron 35.0%
! AAAATGACACGCAGTCATTT+TGG - Chr7:6648982-6649001 None:intergenic 35.0%
! AAATTTCTACTTCTGGAAGG+TGG - Chr7:6649262-6649281 None:intergenic 35.0%
! ATGTGTGTTTTCAGAAGTGA+TGG + Chr7:6650262-6650281 MsG0780036337.01.T01:intron 35.0%
! CCAAAAAATGTGCCCTTTTA+TGG + Chr7:6649035-6649054 MsG0780036337.01.T01:intron 35.0%
! CTTCTGAAAACACACATGAT+CGG - Chr7:6650259-6650278 None:intergenic 35.0%
! TCTAAGACATTGCAATAAGG+AGG + Chr7:6649427-6649446 MsG0780036337.01.T01:intron 35.0%
! TGATAACGTATCACACATTC+AGG + Chr7:6648955-6648974 MsG0780036337.01.T01:intron 35.0%
! TTTGATGACAAATTCGACAG+TGG - Chr7:6649534-6649553 None:intergenic 35.0%
!! CACTTTTAGGTCTCATTTGA+TGG - Chr7:6650043-6650062 None:intergenic 35.0%
!! TGTCGGTTTGTCAAAAACAA+AGG + Chr7:6649325-6649344 MsG0780036337.01.T01:intron 35.0%
!!! CCATAAAAGGGCACATTTTT+TGG - Chr7:6649038-6649057 None:intergenic 35.0%
AACGACGGAGTAATTACCAA+CGG - Chr7:6648394-6648413 None:intergenic 40.0%
AAGTCACCTTCTTAGTCATG+AGG - Chr7:6649299-6649318 None:intergenic 40.0%
AAGTGGTGTTTGTTCCCATA+AGG - Chr7:6649610-6649629 None:intergenic 40.0%
AATCGATGGTCACAGTTATC+GGG - Chr7:6649723-6649742 None:intergenic 40.0%
ACAACGTTACACATCAATGC+AGG - Chr7:6648297-6648316 None:intergenic 40.0%
AGATTGGAGTCAGTCATCTT+TGG + Chr7:6649471-6649490 MsG0780036337.01.T01:intron 40.0%
AGCTTGTGAGAATCAGGAAT+TGG - Chr7:6648435-6648454 None:intergenic 40.0%
AGTTCTCCACTCAAAATCGA+TGG - Chr7:6649737-6649756 None:intergenic 40.0%
ATCAGCTTCGTTCACCTTAT+GGG + Chr7:6649593-6649612 MsG0780036337.01.T01:intron 40.0%
ATTCTCACAAGCTAACTGTC+AGG + Chr7:6648442-6648461 MsG0780036337.01.T01:CDS 40.0%
CAAATTGACATGAACCATGG+CGG + Chr7:6649402-6649421 MsG0780036337.01.T01:intron 40.0%
CAACGTTACACATCAATGCA+GGG - Chr7:6648296-6648315 None:intergenic 40.0%
CGGTATCACAGATGAAATTG+TGG - Chr7:6649910-6649929 None:intergenic 40.0%
GAAGATAAAACATCTCGTCG+TGG - Chr7:6650363-6650382 None:intergenic 40.0%
TACACTTCCAACCAAAATGG+TGG - Chr7:6648727-6648746 None:intergenic 40.0%
TATCAGCTTCGTTCACCTTA+TGG + Chr7:6649592-6649611 MsG0780036337.01.T01:intron 40.0%
TATGGGAACAAACACCACTT+TGG + Chr7:6649610-6649629 MsG0780036337.01.T01:CDS 40.0%
TCCGTCGTTAATCCAAATGA+AGG + Chr7:6648405-6648424 MsG0780036337.01.T01:CDS 40.0%
TGCAATCTTATACCAGTCCT+TGG - Chr7:6649770-6649789 None:intergenic 40.0%
TTCTCACAAGCTAACTGTCA+GGG + Chr7:6648443-6648462 MsG0780036337.01.T01:CDS 40.0%
! ACATTTTCCTTGATACAGGG+AGG + Chr7:6650493-6650512 MsG0780036337.01.T01:intron 40.0%
! AGATGTTTTATCTTCGCGGA+AGG + Chr7:6650368-6650387 MsG0780036337.01.T01:CDS 40.0%
! AGTGTAACTTGCAGTCACTT+TGG + Chr7:6648741-6648760 MsG0780036337.01.T01:intron 40.0%
! GACGAGATGTTTTATCTTCG+CGG + Chr7:6650364-6650383 MsG0780036337.01.T01:CDS 40.0%
! GCCCTTTTATGGAAGTCTTA+AGG + Chr7:6649046-6649065 MsG0780036337.01.T01:intron 40.0%
! GTATCACTAGCAGAGGATTT+TGG + Chr7:6649869-6649888 MsG0780036337.01.T01:intron 40.0%
!! ACAGTTAGCTTGTGAGAATC+AGG - Chr7:6648441-6648460 None:intergenic 40.0%
!! ATCGATTTTGAGTGGAGAAC+TGG + Chr7:6649736-6649755 MsG0780036337.01.T01:CDS 40.0%
!! TCGATTTTGAGTGGAGAACT+GGG + Chr7:6649737-6649756 MsG0780036337.01.T01:CDS 40.0%
AAAAACACCGATGACGACAG+AGG + Chr7:6649234-6649253 MsG0780036337.01.T01:intron 45.0%
AAGAGCAATGCAATGACCGT+TGG + Chr7:6648375-6648394 MsG0780036337.01.T01:CDS 45.0%
AATTCGACAGTGGATCACTG+TGG - Chr7:6649524-6649543 None:intergenic 45.0%
ATCGATGGTCACAGTTATCG+GGG - Chr7:6649722-6649741 None:intergenic 45.0%
ATCTCTTCCTCCCTGTATCA+AGG - Chr7:6650503-6650522 None:intergenic 45.0%
CAATGTCTTAGAAACCGCCA+TGG - Chr7:6649419-6649438 None:intergenic 45.0%
CATGTTGGTATCACTAGCAG+AGG + Chr7:6649862-6649881 MsG0780036337.01.T01:intron 45.0%
CGCCATGGTTCATGTCAATT+TGG - Chr7:6649404-6649423 None:intergenic 45.0%
CTTCGTCCTCATGACTAAGA+AGG + Chr7:6649290-6649309 MsG0780036337.01.T01:intron 45.0%
GAACATCTACTTCCGGAGAT+TGG + Chr7:6649455-6649474 MsG0780036337.01.T01:intron 45.0%
GCATTTACTACAGCTGAAGC+TGG + Chr7:6649658-6649677 MsG0780036337.01.T01:CDS 45.0%
GGACAGTGAACATCTACTTC+CGG + Chr7:6649448-6649467 MsG0780036337.01.T01:intron 45.0%
TAGCATCTAGACGTGCATGT+TGG + Chr7:6649847-6649866 MsG0780036337.01.T01:intron 45.0%
TATTGACACGTGTTGGACAC+CGG + Chr7:6648598-6648617 MsG0780036337.01.T01:intron 45.0%
TCTGTGATACCGTGACTGAT+AGG + Chr7:6649918-6649937 MsG0780036337.01.T01:intron 45.0%
TCTTAGTCATGAGGACGAAG+AGG - Chr7:6649290-6649309 None:intergenic 45.0%
! AGATGACTGACTCCAATCTC+CGG - Chr7:6649470-6649489 None:intergenic 45.0%
! CTTCTTATCGAAGGCATGTC+CGG - Chr7:6648620-6648639 None:intergenic 45.0%
!! CACAGCTTGTTTTTCCTTGC+TGG + Chr7:6649687-6649706 MsG0780036337.01.T01:CDS 45.0%
!! CGATTTTGAGTGGAGAACTG+GGG + Chr7:6649738-6649757 MsG0780036337.01.T01:CDS 45.0%
!!! CTGTGACCATCGATTTTGAG+TGG + Chr7:6649728-6649747 MsG0780036337.01.T01:CDS 45.0%
!!! GCAGAGGATTTTGGTGTCTT+AGG + Chr7:6649878-6649897 MsG0780036337.01.T01:intron 45.0%
AAGCCACACGATCACCAAAG+TGG - Chr7:6649627-6649646 None:intergenic 50.0%
GGGCAAGTTCTTCTGTGAAC+CGG + Chr7:6649195-6649214 MsG0780036337.01.T01:intron 50.0%
TCGATGGTCACAGTTATCGG+GGG - Chr7:6649721-6649740 None:intergenic 50.0%
! ACACCACTTTGGTGATCGTG+TGG + Chr7:6649621-6649640 MsG0780036337.01.T01:CDS 50.0%
! TTTGGTGATCGTGTGGCTTC+TGG + Chr7:6649628-6649647 MsG0780036337.01.T01:CDS 50.0%
!! CTGTTGCTGGTTTGCAACTG+TGG + Chr7:6650594-6650613 MsG0780036337.01.T01:CDS 50.0%
!! TTTTGAGTGGAGAACTGGGG+TGG + Chr7:6649741-6649760 MsG0780036337.01.T01:CDS 50.0%
! CGGGGGTTTTTGATCCAGCA+AGG - Chr7:6649704-6649723 None:intergenic 55.0%
CGGACACCAGACACAACACG+CGG + Chr7:6648498-6648517 MsG0780036337.01.T01:intron 60.0%
GGTGGCACCTCTGTCGTCAT+CGG - Chr7:6649244-6649263 None:intergenic 60.0%
CGGTGTCCGCGTGTTGTGTC+TGG - Chr7:6648507-6648526 None:intergenic 65.0%
GAGAACTGGGGTGGCTGCCA+AGG + Chr7:6649750-6649769 MsG0780036337.01.T01:CDS 65.0%
CTGGGGTGGCTGCCAAGGAC+TGG + Chr7:6649755-6649774 MsG0780036337.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 6648255 6650655 6648255 ID=MsG0780036337.01;Name=MsG0780036337.01
Chr7 mRNA 6648255 6650655 6648255 ID=MsG0780036337.01.T01;Parent=MsG0780036337.01;Name=MsG0780036337.01.T01;_AED=0.38;_eAED=0.39;_QI=0|0|0|1|1|1|4|0|213
Chr7 exon 6648255 6648464 6648255 ID=MsG0780036337.01.T01:exon:3594;Parent=MsG0780036337.01.T01
Chr7 exon 6649598 6649807 6649598 ID=MsG0780036337.01.T01:exon:3595;Parent=MsG0780036337.01.T01
Chr7 exon 6650313 6650389 6650313 ID=MsG0780036337.01.T01:exon:3596;Parent=MsG0780036337.01.T01
Chr7 exon 6650511 6650655 6650511 ID=MsG0780036337.01.T01:exon:3597;Parent=MsG0780036337.01.T01
Chr7 CDS 6648255 6648464 6648255 ID=MsG0780036337.01.T01:cds;Parent=MsG0780036337.01.T01
Chr7 CDS 6649598 6649807 6649598 ID=MsG0780036337.01.T01:cds;Parent=MsG0780036337.01.T01
Chr7 CDS 6650313 6650389 6650313 ID=MsG0780036337.01.T01:cds;Parent=MsG0780036337.01.T01
Chr7 CDS 6650511 6650655 6650511 ID=MsG0780036337.01.T01:cds;Parent=MsG0780036337.01.T01
Gene Sequence

>MsG0780036337.01.T01

ATGTTCAATTCAATTCTTCTTCTTCTTATTGCTATTGTCCCTGCATTGATGTGTAACGTTGTGAATTCAATGCGGTTTGATCTTAAATCTGGTAATCCCAAATGTATCGTTGAGGAAATCAAGAGCAATGCAATGACCGTTGGTAATTACTCCGTCGTTAATCCAAATGAAGGTTATCCAATTCCTGATTCTCACAAGCTAACTGTCAGGCTTCGTTCACCTTATGGGAACAAACACCACTTTGGTGATCGTGTGGCTTCTGGCAATTTCGCATTTACTACAGCTGAAGCTGGTGACTACACAGCTTGTTTTTCCTTGCTGGATCAAAAACCCCCGATAACTGTGACCATCGATTTTGAGTGGAGAACTGGGGTGGCTGCCAAGGACTGGTATAAGATTGCAAAAAAAGATCAGATTGATGTAATGGAATCTGAATTACAGAGGTTGTATGACACTGTCATATTCATCCACGACGAGATGTTTTATCTTCGCGGAAGGGAGGAAGAGATGCAAGATCTTAACAGAGAAACTGATAAAAGAATGTTTACCTTCATTTTCTGTTCAATCATTATTTGCTTGTCTGTTGCTGGTTTGCAACTGTGGCATTTGAAAATATTCTTTGAGAGGAAAAAGCTCCTCTAA
Protein sequence

>MsG0780036337.01.T01

MFNSILLLLIAIVPALMCNVVNSMRFDLKSGNPKCIVEEIKSNAMTVGNYSVVNPNEGYPIPDSHKLTVRLRSPYGNKHHFGDRVASGNFAFTTAEAGDYTACFSLLDQKPPITVTIDFEWRTGVAAKDWYKIAKKDQIDVMESELQRLYDTVIFIHDEMFYLRGREEEMQDLNRETDKRMFTFIFCSIIICLSVAGLQLWHLKIFFERKKLL*