Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035782.01.T01 | QJU69412.1 | 99.581 | 477 | 2 | 0 | 1 | 477 | 13 | 489 | 0 | 962 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035782.01.T01 | Q9SZE2 | 65.563 | 453 | 153 | 1 | 14 | 463 | 54 | 506 | 0 | 632 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035782.01.T01 | A0A6M5KAX9 | 99.581 | 477 | 2 | 0 | 1 | 477 | 13 | 489 | 0.0 | 962 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680035782.01 | MsG0680030296.01 | PPI |
| MsG0680035782.01 | MsG0780039979.01 | PPI |
| MsG0680035782.01 | MsG0180001164.01 | PPI |
| MsG0680035782.01 | MsG0880047539.01 | PPI |
| MsG0680035782.01 | MsG0180001164.01 | PPI |
| MsG0680035782.01 | MsG0480023937.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035782.01.T01 | MTR_6g088805 | 96.855 | 477 | 15 | 0 | 1 | 477 | 13 | 489 | 0.0 | 941 |
| MsG0680035782.01.T01 | MTR_8g102430 | 69.316 | 453 | 120 | 2 | 3 | 454 | 11 | 445 | 0.0 | 645 |
| MsG0680035782.01.T01 | MTR_5g067460 | 56.236 | 457 | 193 | 2 | 14 | 463 | 54 | 510 | 0.0 | 541 |
| MsG0680035782.01.T01 | MTR_3g111020 | 55.435 | 460 | 198 | 2 | 2 | 454 | 34 | 493 | 0.0 | 531 |
| MsG0680035782.01.T01 | MTR_5g010830 | 54.066 | 455 | 206 | 1 | 3 | 454 | 53 | 507 | 0.0 | 525 |
| MsG0680035782.01.T01 | MTR_1g101500 | 51.923 | 468 | 214 | 2 | 16 | 472 | 65 | 532 | 1.12e-175 | 504 |
| MsG0680035782.01.T01 | MTR_0039s0080 | 52.838 | 458 | 213 | 1 | 16 | 470 | 39 | 496 | 3.61e-174 | 500 |
| MsG0680035782.01.T01 | MTR_6g043810 | 48.529 | 476 | 233 | 3 | 13 | 476 | 21 | 496 | 7.68e-161 | 465 |
| MsG0680035782.01.T01 | MTR_6g043810 | 48.529 | 476 | 233 | 3 | 13 | 476 | 31 | 506 | 7.82e-161 | 465 |
| MsG0680035782.01.T01 | MTR_4g027920 | 44.783 | 460 | 248 | 3 | 13 | 466 | 154 | 613 | 2.21e-144 | 427 |
| MsG0680035782.01.T01 | MTR_2g435930 | 42.127 | 489 | 264 | 5 | 3 | 472 | 7 | 495 | 5.92e-134 | 396 |
| MsG0680035782.01.T01 | MTR_6g081410 | 33.263 | 475 | 305 | 6 | 3 | 472 | 13 | 480 | 1.59e-85 | 271 |
| MsG0680035782.01.T01 | MTR_6g081780 | 33.333 | 456 | 293 | 4 | 3 | 450 | 13 | 465 | 4.24e-85 | 270 |
| MsG0680035782.01.T01 | MTR_6g081400 | 34.452 | 447 | 287 | 3 | 10 | 451 | 10 | 455 | 2.01e-83 | 265 |
| MsG0680035782.01.T01 | MTR_5g011540 | 34.615 | 468 | 288 | 4 | 5 | 461 | 33 | 493 | 9.53e-82 | 262 |
| MsG0680035782.01.T01 | MTR_1g108810 | 32.731 | 443 | 293 | 3 | 10 | 448 | 29 | 470 | 2.60e-81 | 260 |
| MsG0680035782.01.T01 | MTR_6g066380 | 32.391 | 460 | 299 | 5 | 18 | 472 | 30 | 482 | 2.72e-77 | 249 |
| MsG0680035782.01.T01 | MTR_1g108840 | 34.430 | 456 | 286 | 7 | 4 | 451 | 30 | 480 | 3.97e-75 | 244 |
| MsG0680035782.01.T01 | MTR_6g081810 | 30.867 | 473 | 290 | 6 | 3 | 472 | 16 | 454 | 6.55e-75 | 243 |
| MsG0680035782.01.T01 | MTR_6g081300 | 32.063 | 446 | 300 | 1 | 10 | 452 | 5 | 450 | 1.89e-72 | 237 |
| MsG0680035782.01.T01 | MTR_8g106670 | 30.357 | 448 | 309 | 1 | 7 | 451 | 4 | 451 | 2.70e-72 | 236 |
| MsG0680035782.01.T01 | MTR_6g081390 | 31.991 | 447 | 298 | 3 | 10 | 451 | 7 | 452 | 3.57e-72 | 236 |
| MsG0680035782.01.T01 | MTR_6g081240 | 32.353 | 442 | 294 | 3 | 9 | 446 | 4 | 444 | 1.57e-70 | 231 |
| MsG0680035782.01.T01 | MTR_1g109060 | 32.755 | 461 | 298 | 6 | 1 | 451 | 5 | 463 | 2.86e-68 | 226 |
| MsG0680035782.01.T01 | MTR_1g109060 | 32.675 | 456 | 295 | 6 | 1 | 446 | 5 | 458 | 1.40e-66 | 222 |
| MsG0680035782.01.T01 | MTR_6g081310 | 33.488 | 430 | 271 | 2 | 38 | 452 | 19 | 448 | 1.41e-66 | 221 |
| MsG0680035782.01.T01 | MTR_7g082810 | 30.000 | 450 | 306 | 3 | 8 | 451 | 13 | 459 | 5.25e-66 | 220 |
| MsG0680035782.01.T01 | MTR_2g078930 | 31.696 | 448 | 298 | 5 | 5 | 445 | 30 | 476 | 5.42e-65 | 218 |
| MsG0680035782.01.T01 | MTR_1g108990 | 31.818 | 462 | 302 | 5 | 1 | 451 | 5 | 464 | 1.86e-64 | 216 |
| MsG0680035782.01.T01 | MTR_6g004220 | 30.197 | 457 | 311 | 5 | 1 | 451 | 9 | 463 | 2.86e-63 | 213 |
| MsG0680035782.01.T01 | MTR_2g079020 | 31.494 | 435 | 295 | 2 | 14 | 445 | 36 | 470 | 3.38e-63 | 213 |
| MsG0680035782.01.T01 | MTR_6g004220 | 30.088 | 452 | 308 | 5 | 1 | 446 | 16 | 465 | 5.52e-61 | 207 |
| MsG0680035782.01.T01 | MTR_2g078960 | 30.575 | 435 | 299 | 2 | 14 | 445 | 32 | 466 | 4.87e-59 | 202 |
| MsG0680035782.01.T01 | MTR_2g088400 | 29.284 | 461 | 316 | 4 | 16 | 472 | 53 | 507 | 1.09e-57 | 199 |
| MsG0680035782.01.T01 | MTR_4g048000 | 28.478 | 460 | 320 | 2 | 16 | 472 | 65 | 518 | 4.47e-57 | 197 |
| MsG0680035782.01.T01 | MTR_2g078970 | 29.613 | 439 | 298 | 2 | 14 | 445 | 30 | 464 | 1.42e-56 | 195 |
| MsG0680035782.01.T01 | MTR_5g033100 | 28.381 | 451 | 314 | 3 | 14 | 461 | 55 | 499 | 4.18e-55 | 192 |
| MsG0680035782.01.T01 | MTR_8g069470 | 28.859 | 447 | 302 | 7 | 14 | 451 | 49 | 488 | 1.53e-53 | 188 |
| MsG0680035782.01.T01 | MTR_2g022980 | 27.778 | 450 | 318 | 4 | 16 | 461 | 49 | 495 | 1.89e-53 | 187 |
| MsG0680035782.01.T01 | MTR_5g032750 | 29.670 | 455 | 309 | 5 | 7 | 452 | 24 | 476 | 4.87e-53 | 186 |
| MsG0680035782.01.T01 | MTR_1g021740 | 26.923 | 442 | 319 | 2 | 13 | 451 | 33 | 473 | 1.61e-49 | 176 |
| MsG0680035782.01.T01 | MTR_2g088400 | 30.198 | 404 | 277 | 3 | 16 | 415 | 53 | 455 | 2.59e-49 | 175 |
| MsG0680035782.01.T01 | MTR_5g032720 | 27.252 | 444 | 318 | 3 | 16 | 455 | 37 | 479 | 1.04e-48 | 174 |
| MsG0680035782.01.T01 | MTR_6g047610 | 27.766 | 461 | 313 | 9 | 4 | 452 | 20 | 472 | 1.63e-47 | 171 |
| MsG0680035782.01.T01 | MTR_8g063590 | 27.489 | 462 | 322 | 6 | 11 | 461 | 49 | 508 | 8.03e-47 | 169 |
| MsG0680035782.01.T01 | MTR_6g004220 | 29.700 | 367 | 254 | 3 | 1 | 363 | 16 | 382 | 3.07e-46 | 167 |
| MsG0680035782.01.T01 | MTR_7g082800 | 27.321 | 377 | 271 | 2 | 78 | 451 | 5 | 381 | 2.21e-45 | 163 |
| MsG0680035782.01.T01 | MTR_3g099700 | 28.182 | 440 | 311 | 3 | 16 | 451 | 47 | 485 | 1.13e-43 | 161 |
| MsG0680035782.01.T01 | MTR_5g090290 | 25.163 | 461 | 334 | 3 | 11 | 464 | 42 | 498 | 1.56e-43 | 162 |
| MsG0680035782.01.T01 | MTR_6g047590 | 27.412 | 456 | 321 | 5 | 4 | 452 | 20 | 472 | 2.63e-43 | 159 |
| MsG0680035782.01.T01 | MTR_6g047640 | 25.870 | 460 | 311 | 7 | 4 | 455 | 20 | 457 | 5.15e-42 | 155 |
| MsG0680035782.01.T01 | MTR_6g047640 | 26.522 | 460 | 327 | 6 | 4 | 455 | 20 | 476 | 1.49e-41 | 155 |
| MsG0680035782.01.T01 | MTR_3g099720 | 24.276 | 449 | 336 | 2 | 16 | 461 | 42 | 489 | 1.19e-40 | 152 |
| MsG0680035782.01.T01 | MTR_1g100180 | 25.847 | 472 | 335 | 5 | 4 | 464 | 32 | 499 | 4.61e-40 | 151 |
| MsG0680035782.01.T01 | MTR_7g087400 | 25.870 | 460 | 320 | 5 | 3 | 451 | 18 | 467 | 3.35e-37 | 142 |
| MsG0680035782.01.T01 | MTR_5g087930 | 26.244 | 442 | 290 | 9 | 32 | 461 | 43 | 460 | 8.56e-36 | 138 |
| MsG0680035782.01.T01 | MTR_6g004220 | 30.719 | 306 | 206 | 4 | 1 | 302 | 16 | 319 | 8.61e-36 | 135 |
| MsG0680035782.01.T01 | MTR_7g087410 | 24.678 | 466 | 338 | 5 | 15 | 472 | 31 | 491 | 3.00e-35 | 137 |
| MsG0680035782.01.T01 | MTR_6g027200 | 25.738 | 474 | 327 | 5 | 2 | 461 | 23 | 485 | 4.80e-34 | 134 |
| MsG0680035782.01.T01 | MTR_6g027190 | 25.458 | 491 | 332 | 7 | 4 | 475 | 13 | 488 | 1.18e-32 | 130 |
| MsG0680035782.01.T01 | MTR_7g087370 | 25.000 | 460 | 295 | 6 | 3 | 451 | 18 | 438 | 5.44e-32 | 127 |
| MsG0680035782.01.T01 | MTR_7g087430 | 26.076 | 395 | 279 | 5 | 78 | 464 | 5 | 394 | 2.74e-29 | 119 |
| MsG0680035782.01.T01 | MTR_7g087410 | 23.325 | 403 | 304 | 3 | 74 | 472 | 1 | 402 | 1.46e-28 | 117 |
| MsG0680035782.01.T01 | MTR_2g078990 | 26.871 | 294 | 204 | 2 | 159 | 445 | 4 | 293 | 3.50e-28 | 114 |
| MsG0680035782.01.T01 | MTR_2g079030 | 29.744 | 195 | 137 | 0 | 251 | 445 | 319 | 513 | 1.33e-21 | 98.2 |
| MsG0680035782.01.T01 | MTR_5g090280 | 23.095 | 433 | 263 | 13 | 77 | 459 | 4 | 416 | 5.05e-15 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035782.01.T01 | AT4G29140 | 65.563 | 453 | 153 | 1 | 14 | 463 | 54 | 506 | 0.0 | 632 |
| MsG0680035782.01.T01 | AT5G19700 | 65.256 | 449 | 153 | 1 | 15 | 460 | 35 | 483 | 0.0 | 615 |
| MsG0680035782.01.T01 | AT1G58340 | 55.982 | 443 | 192 | 1 | 16 | 455 | 58 | 500 | 3.52e-174 | 500 |
| MsG0680035782.01.T01 | AT5G52050 | 48.760 | 484 | 231 | 3 | 4 | 474 | 23 | 502 | 3.07e-166 | 479 |
| MsG0680035782.01.T01 | AT4G23030 | 53.004 | 466 | 215 | 2 | 14 | 475 | 30 | 495 | 2.16e-160 | 464 |
| MsG0680035782.01.T01 | AT1G71870 | 46.042 | 480 | 238 | 3 | 13 | 471 | 21 | 500 | 1.56e-151 | 441 |
| MsG0680035782.01.T01 | AT2G38510 | 49.324 | 444 | 221 | 2 | 16 | 455 | 6 | 449 | 7.78e-150 | 436 |
| MsG0680035782.01.T01 | AT5G49130 | 45.316 | 459 | 232 | 5 | 13 | 453 | 23 | 480 | 2.99e-132 | 392 |
| MsG0680035782.01.T01 | AT4G22790 | 36.147 | 462 | 290 | 4 | 13 | 469 | 27 | 488 | 1.37e-87 | 277 |
| MsG0680035782.01.T01 | AT1G15150 | 33.184 | 446 | 295 | 2 | 9 | 451 | 24 | 469 | 4.90e-73 | 239 |
| MsG0680035782.01.T01 | AT1G15170 | 33.485 | 439 | 289 | 2 | 16 | 451 | 34 | 472 | 2.13e-72 | 237 |
| MsG0680035782.01.T01 | AT1G71140 | 31.264 | 451 | 307 | 2 | 4 | 451 | 14 | 464 | 9.44e-72 | 235 |
| MsG0680035782.01.T01 | AT1G15160 | 32.735 | 446 | 297 | 2 | 9 | 451 | 24 | 469 | 1.16e-71 | 235 |
| MsG0680035782.01.T01 | AT1G73700 | 33.262 | 469 | 301 | 5 | 3 | 464 | 13 | 476 | 6.46e-71 | 233 |
| MsG0680035782.01.T01 | AT5G52450 | 31.614 | 446 | 302 | 2 | 8 | 450 | 18 | 463 | 1.31e-70 | 233 |
| MsG0680035782.01.T01 | AT2G34360 | 30.769 | 468 | 307 | 5 | 5 | 462 | 16 | 476 | 5.22e-69 | 228 |
| MsG0680035782.01.T01 | AT1G66760 | 33.186 | 452 | 298 | 2 | 3 | 451 | 16 | 466 | 1.87e-68 | 227 |
| MsG0680035782.01.T01 | AT1G66760 | 33.110 | 447 | 295 | 2 | 3 | 446 | 16 | 461 | 5.64e-67 | 222 |
| MsG0680035782.01.T01 | AT1G15180 | 32.962 | 449 | 297 | 3 | 7 | 451 | 25 | 473 | 1.31e-65 | 219 |
| MsG0680035782.01.T01 | AT1G66780 | 30.714 | 420 | 288 | 1 | 35 | 451 | 54 | 473 | 9.86e-64 | 214 |
| MsG0680035782.01.T01 | AT1G64820 | 29.646 | 452 | 312 | 4 | 5 | 451 | 17 | 467 | 1.47e-63 | 214 |
| MsG0680035782.01.T01 | AT3G23550 | 30.682 | 440 | 302 | 1 | 9 | 445 | 24 | 463 | 7.77e-61 | 206 |
| MsG0680035782.01.T01 | AT1G15170 | 33.043 | 345 | 228 | 2 | 110 | 451 | 9 | 353 | 1.36e-58 | 197 |
| MsG0680035782.01.T01 | AT3G23560 | 30.385 | 441 | 302 | 3 | 9 | 445 | 32 | 471 | 1.43e-58 | 201 |
| MsG0680035782.01.T01 | AT2G34360 | 28.694 | 467 | 276 | 4 | 5 | 462 | 16 | 434 | 2.55e-58 | 199 |
| MsG0680035782.01.T01 | AT3G26590 | 28.474 | 439 | 310 | 2 | 16 | 451 | 45 | 482 | 9.54e-57 | 196 |
| MsG0680035782.01.T01 | AT2G04050 | 31.278 | 454 | 302 | 6 | 4 | 451 | 16 | 465 | 8.22e-56 | 193 |
| MsG0680035782.01.T01 | AT4G21910 | 29.360 | 453 | 315 | 3 | 16 | 464 | 55 | 506 | 7.56e-55 | 191 |
| MsG0680035782.01.T01 | AT4G21910 | 29.360 | 453 | 315 | 3 | 16 | 464 | 55 | 506 | 7.56e-55 | 191 |
| MsG0680035782.01.T01 | AT2G04100 | 27.742 | 465 | 331 | 2 | 4 | 463 | 18 | 482 | 9.87e-55 | 190 |
| MsG0680035782.01.T01 | AT1G15150 | 33.043 | 345 | 228 | 2 | 110 | 451 | 9 | 353 | 1.72e-54 | 187 |
| MsG0680035782.01.T01 | AT4G21910 | 29.139 | 453 | 316 | 3 | 16 | 464 | 57 | 508 | 2.46e-54 | 190 |
| MsG0680035782.01.T01 | AT4G21910 | 29.139 | 453 | 316 | 3 | 16 | 464 | 57 | 508 | 2.46e-54 | 190 |
| MsG0680035782.01.T01 | AT3G21690 | 27.477 | 444 | 319 | 1 | 10 | 450 | 46 | 489 | 2.79e-54 | 190 |
| MsG0680035782.01.T01 | AT2G04090 | 28.571 | 441 | 308 | 3 | 16 | 451 | 30 | 468 | 3.42e-53 | 186 |
| MsG0680035782.01.T01 | AT2G04080 | 28.419 | 468 | 326 | 5 | 1 | 463 | 12 | 475 | 3.75e-53 | 186 |
| MsG0680035782.01.T01 | AT2G04100 | 27.679 | 448 | 321 | 1 | 4 | 448 | 18 | 465 | 4.03e-53 | 186 |
| MsG0680035782.01.T01 | AT1G61890 | 27.473 | 455 | 325 | 2 | 13 | 464 | 44 | 496 | 6.14e-53 | 186 |
| MsG0680035782.01.T01 | AT2G04040 | 28.571 | 448 | 313 | 3 | 9 | 451 | 20 | 465 | 1.26e-52 | 184 |
| MsG0680035782.01.T01 | AT5G38030 | 28.118 | 441 | 309 | 4 | 16 | 451 | 45 | 482 | 1.69e-52 | 185 |
| MsG0680035782.01.T01 | AT1G11670 | 27.169 | 438 | 316 | 1 | 16 | 450 | 50 | 487 | 3.40e-52 | 184 |
| MsG0680035782.01.T01 | AT2G04080 | 28.384 | 458 | 321 | 4 | 1 | 453 | 12 | 467 | 6.66e-52 | 182 |
| MsG0680035782.01.T01 | AT1G61890 | 27.918 | 437 | 312 | 1 | 13 | 446 | 44 | 480 | 1.39e-51 | 182 |
| MsG0680035782.01.T01 | AT4G00350 | 27.778 | 450 | 314 | 4 | 7 | 450 | 79 | 523 | 2.58e-51 | 182 |
| MsG0680035782.01.T01 | AT2G04070 | 28.381 | 451 | 318 | 2 | 16 | 463 | 27 | 475 | 8.26e-51 | 180 |
| MsG0680035782.01.T01 | AT3G26590 | 28.836 | 378 | 265 | 2 | 77 | 451 | 4 | 380 | 2.42e-50 | 176 |
| MsG0680035782.01.T01 | AT1G12950 | 26.078 | 464 | 328 | 6 | 16 | 472 | 67 | 522 | 5.32e-50 | 179 |
| MsG0680035782.01.T01 | AT4G21903 | 28.155 | 412 | 292 | 2 | 43 | 451 | 80 | 490 | 9.66e-50 | 177 |
| MsG0680035782.01.T01 | AT4G21903 | 27.791 | 421 | 300 | 2 | 43 | 460 | 80 | 499 | 8.88e-49 | 175 |
| MsG0680035782.01.T01 | AT1G66760 | 32.982 | 379 | 250 | 2 | 3 | 378 | 16 | 393 | 1.90e-48 | 171 |
| MsG0680035782.01.T01 | AT5G44050 | 28.194 | 454 | 320 | 4 | 3 | 452 | 28 | 479 | 5.83e-47 | 170 |
| MsG0680035782.01.T01 | AT4G21903 | 28.382 | 377 | 267 | 1 | 78 | 451 | 5 | 381 | 2.84e-46 | 166 |
| MsG0680035782.01.T01 | AT3G23560 | 30.986 | 355 | 241 | 2 | 9 | 360 | 32 | 385 | 3.99e-46 | 166 |
| MsG0680035782.01.T01 | AT3G59030 | 24.890 | 454 | 338 | 1 | 11 | 461 | 46 | 499 | 4.10e-46 | 167 |
| MsG0680035782.01.T01 | AT5G65380 | 26.549 | 452 | 327 | 3 | 3 | 450 | 24 | 474 | 4.68e-46 | 167 |
| MsG0680035782.01.T01 | AT1G61890 | 28.571 | 406 | 287 | 1 | 13 | 415 | 44 | 449 | 5.61e-46 | 167 |
| MsG0680035782.01.T01 | AT1G47530 | 26.364 | 440 | 318 | 4 | 16 | 451 | 35 | 472 | 6.64e-45 | 164 |
| MsG0680035782.01.T01 | AT5G10420 | 26.562 | 448 | 323 | 4 | 9 | 452 | 32 | 477 | 1.00e-44 | 164 |
| MsG0680035782.01.T01 | AT1G23300 | 26.991 | 452 | 315 | 6 | 10 | 451 | 35 | 481 | 1.93e-44 | 163 |
| MsG0680035782.01.T01 | AT1G33090 | 27.983 | 461 | 313 | 5 | 1 | 446 | 12 | 468 | 3.20e-44 | 162 |
| MsG0680035782.01.T01 | AT1G66760 | 31.722 | 331 | 223 | 1 | 119 | 446 | 3 | 333 | 3.53e-44 | 158 |
| MsG0680035782.01.T01 | AT1G33100 | 27.434 | 452 | 314 | 6 | 3 | 446 | 20 | 465 | 7.67e-43 | 158 |
| MsG0680035782.01.T01 | AT1G33110 | 26.549 | 452 | 318 | 6 | 3 | 446 | 23 | 468 | 2.65e-41 | 154 |
| MsG0680035782.01.T01 | AT4G25640 | 26.490 | 453 | 322 | 5 | 3 | 449 | 21 | 468 | 2.95e-41 | 154 |
| MsG0680035782.01.T01 | AT4G25640 | 26.490 | 453 | 322 | 5 | 3 | 449 | 21 | 468 | 6.59e-41 | 154 |
| MsG0680035782.01.T01 | AT1G33080 | 25.957 | 470 | 325 | 7 | 1 | 453 | 12 | 475 | 3.06e-39 | 148 |
| MsG0680035782.01.T01 | AT1G33080 | 26.350 | 463 | 318 | 7 | 1 | 446 | 12 | 468 | 9.62e-39 | 147 |
| MsG0680035782.01.T01 | AT5G17700 | 24.678 | 466 | 323 | 7 | 4 | 451 | 16 | 471 | 3.76e-37 | 143 |
| MsG0680035782.01.T01 | AT5G17700 | 24.678 | 466 | 323 | 7 | 4 | 451 | 16 | 471 | 3.76e-37 | 143 |
| MsG0680035782.01.T01 | AT4G25640 | 26.603 | 421 | 294 | 6 | 3 | 415 | 21 | 434 | 1.39e-36 | 140 |
| MsG0680035782.01.T01 | AT1G47530 | 25.661 | 378 | 275 | 4 | 78 | 451 | 5 | 380 | 2.05e-35 | 136 |
| MsG0680035782.01.T01 | AT3G03620 | 24.619 | 459 | 324 | 8 | 3 | 449 | 24 | 472 | 8.95e-34 | 133 |
| MsG0680035782.01.T01 | AT3G03620 | 24.619 | 459 | 324 | 8 | 3 | 449 | 24 | 472 | 8.95e-34 | 133 |
| MsG0680035782.01.T01 | AT3G59030 | 24.933 | 373 | 277 | 1 | 11 | 380 | 46 | 418 | 1.31e-33 | 132 |
| MsG0680035782.01.T01 | AT1G15180 | 31.660 | 259 | 174 | 2 | 110 | 365 | 9 | 267 | 1.77e-32 | 128 |
| MsG0680035782.01.T01 | AT1G33110 | 25.654 | 382 | 276 | 4 | 3 | 379 | 23 | 401 | 7.42e-30 | 120 |
| MsG0680035782.01.T01 | AT5G17700 | 23.155 | 393 | 274 | 7 | 4 | 378 | 16 | 398 | 8.83e-21 | 94.7 |
Find 108 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGCCACTGTGGCATCTA+TGG | 0.145728 | 6:+112184458 | MsG0680035782.01.T01:CDS |
| GTTCTTTCTGGTTTATCTTT+AGG | 0.163972 | 6:+112183859 | MsG0680035782.01.T01:CDS |
| CCCGGTTACTTTAGCATCTT+TGG | 0.190720 | 6:+112184152 | MsG0680035782.01.T01:CDS |
| ACCGGTTATTCAGTTCTTTC+TGG | 0.192208 | 6:+112183847 | MsG0680035782.01.T01:CDS |
| CCTCTTTGTTCTCAAGCTTT+TGG | 0.210826 | 6:+112183889 | MsG0680035782.01.T01:CDS |
| CAAGATAAGTTTGTGACATT+TGG | 0.256421 | 6:-112184050 | None:intergenic |
| AACAAACCTGGGCTGATAAA+AGG | 0.289198 | 6:-112184917 | None:intergenic |
| ACATTTGATGAAGTGGATAA+TGG | 0.290961 | 6:+112185014 | MsG0680035782.01.T01:CDS |
| AGAATCATTGATTAGTGGTT+TGG | 0.291243 | 6:+112185052 | MsG0680035782.01.T01:CDS |
| GCACGAAGGTAAATCCTAAT+TGG | 0.332481 | 6:-112184114 | None:intergenic |
| TTCAGTGTCTTTGGAAATCA+TGG | 0.333345 | 6:-112183650 | None:intergenic |
| TTCACATTCGCCGCCACTTT+CGG | 0.335868 | 6:-112184807 | None:intergenic |
| GGCTTAATGTTGTATATAGT+TGG | 0.336611 | 6:+112184945 | MsG0680035782.01.T01:CDS |
| AGTGTTAATGATAGAAGTTT+TGG | 0.338367 | 6:-112183922 | None:intergenic |
| TCGCCGTTTCGACGCGTATT+GGG | 0.341325 | 6:+112184535 | MsG0680035782.01.T01:CDS |
| ATTAAACCATAGAAAAGAAA+TGG | 0.344421 | 6:-112183983 | None:intergenic |
| TGGGAATGCCGGTGGCGGTT+GGG | 0.348817 | 6:+112184850 | MsG0680035782.01.T01:CDS |
| AAGATAAGTTTGTGACATTT+GGG | 0.349011 | 6:-112184049 | None:intergenic |
| GTGGGAATGCCGGTGGCGGT+TGG | 0.350528 | 6:+112184849 | MsG0680035782.01.T01:CDS |
| GAGCTGTGTTTCGGTTTGTT+TGG | 0.362081 | 6:+112184383 | MsG0680035782.01.T01:CDS |
| AGCTGCGCCGAGCTGTGTTT+CGG | 0.364161 | 6:+112184374 | MsG0680035782.01.T01:CDS |
| GTGGTTTATGTTTGGATAAG+TGG | 0.369906 | 6:+112184282 | MsG0680035782.01.T01:CDS |
| ACCAAAGATGCTAAAGTAAC+CGG | 0.371978 | 6:-112184153 | None:intergenic |
| CTCGCCGTTTCGACGCGTAT+TGG | 0.382709 | 6:+112184534 | MsG0680035782.01.T01:CDS |
| TTGTATTGGTGGTTTATGTT+TGG | 0.387951 | 6:+112184274 | MsG0680035782.01.T01:CDS |
| TGGTTTATGTTTGGATAAGT+GGG | 0.390301 | 6:+112184283 | MsG0680035782.01.T01:CDS |
| TTCTGGTTTATCTTTAGGTA+TGG | 0.390702 | 6:+112183864 | MsG0680035782.01.T01:CDS |
| GCGGAAAACCTCGCATTTCT+CGG | 0.405631 | 6:-112184579 | None:intergenic |
| AGCTCACACAATCCTAAAAT+CGG | 0.429181 | 6:-112184732 | None:intergenic |
| ACTGCCACTGTGGCATCTAT+GGG | 0.432619 | 6:+112184459 | MsG0680035782.01.T01:CDS |
| AACAACTGATTGGGAACAAC+AGG | 0.433324 | 6:+112184968 | MsG0680035782.01.T01:CDS |
| TGGGTAAGGAACATGATAAT+AGG | 0.433972 | 6:-112183963 | None:intergenic |
| ACCAGAAAGAACTGAATAAC+CGG | 0.436811 | 6:-112183848 | None:intergenic |
| GACGCGTATTGGGAATGCGC+TGG | 0.443061 | 6:+112184545 | MsG0680035782.01.T01:CDS |
| AAAGAATTAGTAACAAGATC+AGG | 0.448264 | 6:-112184084 | None:intergenic |
| CACATGGAATGCTCCGAGTC+GGG | 0.449272 | 6:+112184317 | MsG0680035782.01.T01:CDS |
| ATATAGTTGGAACAACTGAT+TGG | 0.450352 | 6:+112184958 | MsG0680035782.01.T01:CDS |
| AAAGCAAGCCCAACCGCCAC+CGG | 0.450363 | 6:-112184858 | None:intergenic |
| TCAGCCCAGGTTTGTTGTGC+GGG | 0.452076 | 6:+112184924 | MsG0680035782.01.T01:CDS |
| CTTTCGGCCTCGCTGTCCCT+CGG | 0.459191 | 6:-112184791 | None:intergenic |
| ATGATATCTATGATGTTCCT+TGG | 0.461624 | 6:+112183766 | MsG0680035782.01.T01:CDS |
| CGGTTTGTTTGGAGTGGTGG+TGG | 0.465672 | 6:+112184394 | MsG0680035782.01.T01:CDS |
| CATAGATGCCACAGTGGCAG+TGG | 0.471109 | 6:-112184457 | None:intergenic |
| TTAAGCCCGCACAACAAACC+TGG | 0.474566 | 6:-112184929 | None:intergenic |
| TTGGGAACAACAGGCTCGTC+GGG | 0.477691 | 6:+112184977 | MsG0680035782.01.T01:CDS |
| ATTAACAACATTTGATGAAG+TGG | 0.479977 | 6:+112185007 | MsG0680035782.01.T01:CDS |
| AAGGAACATCATAGATATCA+TGG | 0.480169 | 6:-112183764 | None:intergenic |
| ATGATGTTCCTTGGTAAACT+TGG | 0.481188 | 6:+112183775 | MsG0680035782.01.T01:CDS |
| TTTCGGTTTGTTTGGAGTGG+TGG | 0.494405 | 6:+112184391 | MsG0680035782.01.T01:CDS |
| ATTAGTGCTGTTAGTGCTGT+TGG | 0.508311 | 6:-112183727 | None:intergenic |
| GGTGATGTGGAACTTGCATC+AGG | 0.516350 | 6:+112183796 | MsG0680035782.01.T01:CDS |
| TTAAACCATAGAAAAGAAAT+GGG | 0.520212 | 6:-112183982 | None:intergenic |
| TATTATACGCTTGACGGCGG+CGG | 0.521310 | 6:+112184704 | MsG0680035782.01.T01:CDS |
| TATAGTTGGAACAACTGATT+GGG | 0.523036 | 6:+112184959 | MsG0680035782.01.T01:CDS |
| ATTCCCAATACGCGTCGAAA+CGG | 0.525658 | 6:-112184538 | None:intergenic |
| TGATGAAGTGGATAATGGAT+TGG | 0.528362 | 6:+112185019 | MsG0680035782.01.T01:CDS |
| ATCAGCCCAGGTTTGTTGTG+CGG | 0.529405 | 6:+112184923 | MsG0680035782.01.T01:CDS |
| GTTACTTTAGCATCTTTGGT+TGG | 0.529978 | 6:+112184156 | MsG0680035782.01.T01:CDS |
| CTATGATGATGAGGTGGCAG+TGG | 0.531996 | 6:+112184655 | MsG0680035782.01.T01:CDS |
| ACGCGTATTGGGAATGCGCT+GGG | 0.538996 | 6:+112184546 | MsG0680035782.01.T01:CDS |
| TGAAGATATTATACGCTTGA+CGG | 0.539734 | 6:+112184698 | MsG0680035782.01.T01:CDS |
| GGTTATGTTTGCAAAAGCTA+TGG | 0.540126 | 6:-112183827 | None:intergenic |
| TATGGTGGGAATGCCGGTGG+CGG | 0.543177 | 6:+112184845 | MsG0680035782.01.T01:CDS |
| AGGGACAGCGAGGCCGAAAG+TGG | 0.544399 | 6:+112184794 | MsG0680035782.01.T01:CDS |
| TGTCCGCAGACAGTTGGTTG+CGG | 0.549346 | 6:+112184762 | MsG0680035782.01.T01:CDS |
| TGCTCAATCTGTCACCTACC+CGG | 0.553385 | 6:+112184134 | MsG0680035782.01.T01:CDS |
| TTCTATCATTAACACTTCAA+CGG | 0.554078 | 6:+112183929 | MsG0680035782.01.T01:CDS |
| GTTGGTTGCGGTGTTGTCCG+AGG | 0.554516 | 6:+112184774 | MsG0680035782.01.T01:CDS |
| CAAGCGTATAATATCTTCAT+CGG | 0.567742 | 6:-112184694 | None:intergenic |
| GGAAATTGTCCGCAGACAGT+TGG | 0.570131 | 6:+112184756 | MsG0680035782.01.T01:CDS |
| TTGGTTGCGGTGTTGTCCGA+GGG | 0.570901 | 6:+112184775 | MsG0680035782.01.T01:CDS |
| TCAGTGTCTTTGGAAATCAT+GGG | 0.570959 | 6:-112183649 | None:intergenic |
| GACAGCGAGGCCGAAAGTGG+CGG | 0.573637 | 6:+112184797 | MsG0680035782.01.T01:CDS |
| ATTGGAGGCAGCAGAAGCAA+TGG | 0.575110 | 6:-112184238 | None:intergenic |
| ATAGATGCCACAGTGGCAGT+GGG | 0.578818 | 6:-112184456 | None:intergenic |
| GTGTTTCGGTTTGTTTGGAG+TGG | 0.580358 | 6:+112184388 | MsG0680035782.01.T01:CDS |
| TATGATGATGAGGTGGCAGT+GGG | 0.581202 | 6:+112184656 | MsG0680035782.01.T01:CDS |
| ATTGGGAACAACAGGCTCGT+CGG | 0.589845 | 6:+112184976 | MsG0680035782.01.T01:CDS |
| CCACATGGAATGCTCCGAGT+CGG | 0.591177 | 6:+112184316 | MsG0680035782.01.T01:CDS |
| CCATAGAAAAGAAATGGGTA+AGG | 0.591861 | 6:-112183977 | None:intergenic |
| CCTTGGTAAACTTGGTGATG+TGG | 0.595738 | 6:+112183783 | MsG0680035782.01.T01:CDS |
| TGATGATGAGGTGGCAGTGG+GGG | 0.598670 | 6:+112184658 | MsG0680035782.01.T01:CDS |
| GGTTTATGTTTGGATAAGTG+GGG | 0.602483 | 6:+112184284 | MsG0680035782.01.T01:CDS |
| GAAGTGGATAATGGATTGGA+AGG | 0.603549 | 6:+112185023 | MsG0680035782.01.T01:CDS |
| CCAAAGATGCTAAAGTAACC+GGG | 0.608616 | 6:-112184152 | None:intergenic |
| TTATATGGTGGGAATGCCGG+TGG | 0.616833 | 6:+112184842 | MsG0680035782.01.T01:CDS |
| GGCGCAGCTAGCTTAATCAA+CGG | 0.623000 | 6:-112184360 | None:intergenic |
| ACACCGCAACCAACTGTCTG+CGG | 0.626465 | 6:-112184765 | None:intergenic |
| TGTGGACCCCACTGCCACTG+TGG | 0.629575 | 6:+112184449 | MsG0680035782.01.T01:CDS |
| CCAAAAGCTTGAGAACAAAG+AGG | 0.643681 | 6:-112183889 | None:intergenic |
| ACGGCGAGTCCCATAGAAGA+CGG | 0.647265 | 6:-112184519 | None:intergenic |
| TAAGCCCGCACAACAAACCT+GGG | 0.648451 | 6:-112184928 | None:intergenic |
| GTGGGGTCCACATTGCCACA+TGG | 0.649972 | 6:+112184301 | MsG0680035782.01.T01:CDS |
| AGCAGTTATGGGATTTACTG+CGG | 0.653039 | 6:+112184623 | MsG0680035782.01.T01:CDS |
| AAACAAACCGAAACACAGCT+CGG | 0.654086 | 6:-112184381 | None:intergenic |
| AGATATTATACGCTTGACGG+CGG | 0.656436 | 6:+112184701 | MsG0680035782.01.T01:CDS |
| GAGCATTCCATGTGGCAATG+TGG | 0.658665 | 6:-112184308 | None:intergenic |
| CTGCCACTGTGGCATCTATG+GGG | 0.659623 | 6:+112184460 | MsG0680035782.01.T01:CDS |
| AGATGCTAAAGTAACCGGGT+AGG | 0.670460 | 6:-112184148 | None:intergenic |
| CCACATCACCAAGTTTACCA+AGG | 0.681505 | 6:-112183783 | None:intergenic |
| CAAATCGTCCGAGAAATGCG+AGG | 0.692474 | 6:+112184571 | MsG0680035782.01.T01:CDS |
| GCGTATAATATCTTCATCGG+CGG | 0.698582 | 6:-112184691 | None:intergenic |
| TAGATGCCACAGTGGCAGTG+GGG | 0.708739 | 6:-112184455 | None:intergenic |
| GTGTTGTCCGAGGGACAGCG+AGG | 0.741904 | 6:+112184784 | MsG0680035782.01.T01:CDS |
| AGGTGACAGATTGAGCACGA+AGG | 0.745308 | 6:-112184128 | None:intergenic |
| ATGATGATGAGGTGGCAGTG+GGG | 0.752967 | 6:+112184657 | MsG0680035782.01.T01:CDS |
| CCGACTCGGAGCATTCCATG+TGG | 0.754058 | 6:-112184316 | None:intergenic |
| TATCCCCATAGATGCCACAG+TGG | 0.759990 | 6:-112184463 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAACCATAGAAAAGAAA+TGG | - | Chr6:112183986-112184005 | None:intergenic | 20.0% |
| !! | TTAAACCATAGAAAAGAAAT+GGG | - | Chr6:112183985-112184004 | None:intergenic | 20.0% |
| !! | TTGAAGAGTAAAAAGTTAAA+AGG | - | Chr6:112184198-112184217 | None:intergenic | 20.0% |
| !!! | AACTTTTTACTCTTCAAAAA+GGG | + | Chr6:112184201-112184220 | MsG0680035782.01.T01:CDS | 20.0% |
| !!! | TAACTTTTTACTCTTCAAAA+AGG | + | Chr6:112184200-112184219 | MsG0680035782.01.T01:CDS | 20.0% |
| !!! | TTATTTTTACTATGATGATG+AGG | + | Chr6:112184646-112184665 | MsG0680035782.01.T01:CDS | 20.0% |
| ! | AAAGAATTAGTAACAAGATC+AGG | - | Chr6:112184087-112184106 | None:intergenic | 25.0% |
| ! | AAGATAAGTTTGTGACATTT+GGG | - | Chr6:112184052-112184071 | None:intergenic | 25.0% |
| ! | ATTAACAACATTTGATGAAG+TGG | + | Chr6:112185007-112185026 | MsG0680035782.01.T01:CDS | 25.0% |
| ! | TACAACCAAAACTGAAAAAT+TGG | - | Chr6:112184259-112184278 | None:intergenic | 25.0% |
| ! | TTCTATCATTAACACTTCAA+CGG | + | Chr6:112183929-112183948 | MsG0680035782.01.T01:CDS | 25.0% |
| !! | AGTGTTAATGATAGAAGTTT+TGG | - | Chr6:112183925-112183944 | None:intergenic | 25.0% |
| !! | ATTCTTTTCTTCAACCAATT+AGG | + | Chr6:112184100-112184119 | MsG0680035782.01.T01:CDS | 25.0% |
| !! | CAAAAAGAATCATTGATTAG+TGG | + | Chr6:112185047-112185066 | MsG0680035782.01.T01:CDS | 25.0% |
| !!! | GAATTTGAGTGCTTTTTATA+TGG | + | Chr6:112184827-112184846 | MsG0680035782.01.T01:CDS | 25.0% |
| !!! | TTAATGATAGAAGTTTTGGA+CGG | - | Chr6:112183921-112183940 | None:intergenic | 25.0% |
| !!! | TTTTTCAGTTTTGGTTGTAT+TGG | + | Chr6:112184260-112184279 | MsG0680035782.01.T01:CDS | 25.0% |
| AACCAAAACTGAAAAATTGG+AGG | - | Chr6:112184256-112184275 | None:intergenic | 30.0% | |
| AAGGAACATCATAGATATCA+TGG | - | Chr6:112183767-112183786 | None:intergenic | 30.0% | |
| ACATTTGATGAAGTGGATAA+TGG | + | Chr6:112185014-112185033 | MsG0680035782.01.T01:CDS | 30.0% | |
| ATATAGTTGGAACAACTGAT+TGG | + | Chr6:112184958-112184977 | MsG0680035782.01.T01:CDS | 30.0% | |
| ATGATATCTATGATGTTCCT+TGG | + | Chr6:112183766-112183785 | MsG0680035782.01.T01:CDS | 30.0% | |
| CAAGATAAGTTTGTGACATT+TGG | - | Chr6:112184053-112184072 | None:intergenic | 30.0% | |
| CAAGCGTATAATATCTTCAT+CGG | - | Chr6:112184697-112184716 | None:intergenic | 30.0% | |
| GGCTTAATGTTGTATATAGT+TGG | + | Chr6:112184945-112184964 | MsG0680035782.01.T01:CDS | 30.0% | |
| TATAGTTGGAACAACTGATT+GGG | + | Chr6:112184959-112184978 | MsG0680035782.01.T01:CDS | 30.0% | |
| TGAAGATATTATACGCTTGA+CGG | + | Chr6:112184698-112184717 | MsG0680035782.01.T01:CDS | 30.0% | |
| TGGTTTATGTTTGGATAAGT+GGG | + | Chr6:112184283-112184302 | MsG0680035782.01.T01:CDS | 30.0% | |
| ! | AGAATCATTGATTAGTGGTT+TGG | + | Chr6:112185052-112185071 | MsG0680035782.01.T01:CDS | 30.0% |
| ! | ATAGCTTTTGCAAACATAAC+CGG | + | Chr6:112183829-112183848 | MsG0680035782.01.T01:CDS | 30.0% |
| ! | TATGTTTTTCCGTCTTCTAT+GGG | + | Chr6:112184510-112184529 | MsG0680035782.01.T01:CDS | 30.0% |
| ! | TTATGTTTTTCCGTCTTCTA+TGG | + | Chr6:112184509-112184528 | MsG0680035782.01.T01:CDS | 30.0% |
| ! | TTGTATTGGTGGTTTATGTT+TGG | + | Chr6:112184274-112184293 | MsG0680035782.01.T01:CDS | 30.0% |
| !! | GTTCTTTCTGGTTTATCTTT+AGG | + | Chr6:112183859-112183878 | MsG0680035782.01.T01:CDS | 30.0% |
| !! | TCTTTGATTTTCAGTGTCTT+TGG | - | Chr6:112183662-112183681 | None:intergenic | 30.0% |
| !! | TGGTTTGATTTTGGATTTTG+CGG | + | Chr6:112184882-112184901 | MsG0680035782.01.T01:CDS | 30.0% |
| !! | TTCTGGTTTATCTTTAGGTA+TGG | + | Chr6:112183864-112183883 | MsG0680035782.01.T01:CDS | 30.0% |
| !! | TTGAGTGCTTTTTATATGGT+GGG | + | Chr6:112184831-112184850 | MsG0680035782.01.T01:CDS | 30.0% |
| !! | TTTGAGTGCTTTTTATATGG+TGG | + | Chr6:112184830-112184849 | MsG0680035782.01.T01:CDS | 30.0% |
| !! | TTTTTACTATGATGATGAGG+TGG | + | Chr6:112184649-112184668 | MsG0680035782.01.T01:CDS | 30.0% |
| !!! | CTTGCTTTTTGGTTTGATTT+TGG | + | Chr6:112184873-112184892 | MsG0680035782.01.T01:CDS | 30.0% |
| AAAAAACACTGCTATCACAG+CGG | - | Chr6:112184601-112184620 | None:intergenic | 35.0% | |
| ACCAAAGATGCTAAAGTAAC+CGG | - | Chr6:112184156-112184175 | None:intergenic | 35.0% | |
| ACCAGAAAGAACTGAATAAC+CGG | - | Chr6:112183851-112183870 | None:intergenic | 35.0% | |
| AGCTCACACAATCCTAAAAT+CGG | - | Chr6:112184735-112184754 | None:intergenic | 35.0% | |
| ATGATGTTCCTTGGTAAACT+TGG | + | Chr6:112183775-112183794 | MsG0680035782.01.T01:CDS | 35.0% | |
| CCATAGAAAAGAAATGGGTA+AGG | - | Chr6:112183980-112183999 | None:intergenic | 35.0% | |
| GGTTATGTTTGCAAAAGCTA+TGG | - | Chr6:112183830-112183849 | None:intergenic | 35.0% | |
| GGTTTATGTTTGGATAAGTG+GGG | + | Chr6:112184284-112184303 | MsG0680035782.01.T01:CDS | 35.0% | |
| GTGGTTTATGTTTGGATAAG+TGG | + | Chr6:112184282-112184301 | MsG0680035782.01.T01:CDS | 35.0% | |
| TGGGTAAGGAACATGATAAT+AGG | - | Chr6:112183966-112183985 | None:intergenic | 35.0% | |
| ! | CCTTACCCATTTCTTTTCTA+TGG | + | Chr6:112183977-112183996 | MsG0680035782.01.T01:CDS | 35.0% |
| ! | GTTACTTTAGCATCTTTGGT+TGG | + | Chr6:112184156-112184175 | MsG0680035782.01.T01:CDS | 35.0% |
| !! | AGTTTTGTGTGGATTTCTTG+TGG | + | Chr6:112184431-112184450 | MsG0680035782.01.T01:CDS | 35.0% |
| !! | CTCTTCAAAAAGGGTATTTC+TGG | + | Chr6:112184210-112184229 | MsG0680035782.01.T01:CDS | 35.0% |
| !! | GGTTTGATTTTGGATTTTGC+GGG | + | Chr6:112184883-112184902 | MsG0680035782.01.T01:CDS | 35.0% |
| !! | TGATGAAGTGGATAATGGAT+TGG | + | Chr6:112185019-112185038 | MsG0680035782.01.T01:CDS | 35.0% |
| !! | TGCCTCCAATTTTTCAGTTT+TGG | + | Chr6:112184251-112184270 | MsG0680035782.01.T01:CDS | 35.0% |
| !! | TTTTTATATGGTGGGAATGC+CGG | + | Chr6:112184839-112184858 | MsG0680035782.01.T01:CDS | 35.0% |
| !!! | AGTGTTTTTTGCAGCAGTTA+TGG | + | Chr6:112184611-112184630 | MsG0680035782.01.T01:CDS | 35.0% |
| !!! | ATTTTAGGATTGTGTGAGCT+AGG | + | Chr6:112184735-112184754 | MsG0680035782.01.T01:CDS | 35.0% |
| !!! | GAGATTGTGATAGTTTTGTG+TGG | + | Chr6:112184420-112184439 | MsG0680035782.01.T01:CDS | 35.0% |
| !!! | GTGTTTTTTGCAGCAGTTAT+GGG | + | Chr6:112184612-112184631 | MsG0680035782.01.T01:CDS | 35.0% |
| !!! | TTCAGTTTTGGTTGTATTGG+TGG | + | Chr6:112184263-112184282 | MsG0680035782.01.T01:CDS | 35.0% |
| AAACAAACCGAAACACAGCT+CGG | - | Chr6:112184384-112184403 | None:intergenic | 40.0% | |
| AACAAACCTGGGCTGATAAA+AGG | - | Chr6:112184920-112184939 | None:intergenic | 40.0% | |
| AACAACTGATTGGGAACAAC+AGG | + | Chr6:112184968-112184987 | MsG0680035782.01.T01:CDS | 40.0% | |
| ACCGGTTATTCAGTTCTTTC+TGG | + | Chr6:112183847-112183866 | MsG0680035782.01.T01:CDS | 40.0% | |
| AGATATTATACGCTTGACGG+CGG | + | Chr6:112184701-112184720 | MsG0680035782.01.T01:CDS | 40.0% | |
| AGCAGTTATGGGATTTACTG+CGG | + | Chr6:112184623-112184642 | MsG0680035782.01.T01:CDS | 40.0% | |
| CCAAAAGCTTGAGAACAAAG+AGG | - | Chr6:112183892-112183911 | None:intergenic | 40.0% | |
| CCAAAGATGCTAAAGTAACC+GGG | - | Chr6:112184155-112184174 | None:intergenic | 40.0% | |
| GCACGAAGGTAAATCCTAAT+TGG | - | Chr6:112184117-112184136 | None:intergenic | 40.0% | |
| GCGTATAATATCTTCATCGG+CGG | - | Chr6:112184694-112184713 | None:intergenic | 40.0% | |
| ! | ATTAGTGCTGTTAGTGCTGT+TGG | - | Chr6:112183730-112183749 | None:intergenic | 40.0% |
| ! | ATTTTGGATTTTGCGGGCTT+TGG | + | Chr6:112184889-112184908 | MsG0680035782.01.T01:CDS | 40.0% |
| ! | CCTCTTTGTTCTCAAGCTTT+TGG | + | Chr6:112183889-112183908 | MsG0680035782.01.T01:CDS | 40.0% |
| !! | GAAGTGGATAATGGATTGGA+AGG | + | Chr6:112185023-112185042 | MsG0680035782.01.T01:CDS | 40.0% |
| AGATGCTAAAGTAACCGGGT+AGG | - | Chr6:112184151-112184170 | None:intergenic | 45.0% | |
| ATTCCCAATACGCGTCGAAA+CGG | - | Chr6:112184541-112184560 | None:intergenic | 45.0% | |
| CCAAAAAAACACTCCCGACT+CGG | - | Chr6:112184333-112184352 | None:intergenic | 45.0% | |
| CCACATCACCAAGTTTACCA+AGG | - | Chr6:112183786-112183805 | None:intergenic | 45.0% | |
| ! | CCCGGTTACTTTAGCATCTT+TGG | + | Chr6:112184152-112184171 | MsG0680035782.01.T01:CDS | 45.0% |
| ! | GAGCTGTGTTTCGGTTTGTT+TGG | + | Chr6:112184383-112184402 | MsG0680035782.01.T01:CDS | 45.0% |
| ! | GTGTTTCGGTTTGTTTGGAG+TGG | + | Chr6:112184388-112184407 | MsG0680035782.01.T01:CDS | 45.0% |
| ! | TATGATGATGAGGTGGCAGT+GGG | + | Chr6:112184656-112184675 | MsG0680035782.01.T01:CDS | 45.0% |
| ! | TTTCGGTTTGTTTGGAGTGG+TGG | + | Chr6:112184391-112184410 | MsG0680035782.01.T01:CDS | 45.0% |
| !! | CCTTGGTAAACTTGGTGATG+TGG | + | Chr6:112183783-112183802 | MsG0680035782.01.T01:CDS | 45.0% |
| !!! | CGAGTCGGGAGTGTTTTTTT+GGG | + | Chr6:112184331-112184350 | MsG0680035782.01.T01:CDS | 45.0% |
| !!! | TCGGGAGTGTTTTTTTGGGT+GGG | + | Chr6:112184335-112184354 | MsG0680035782.01.T01:CDS | 45.0% |
| ACTGCCACTGTGGCATCTAT+GGG | + | Chr6:112184459-112184478 | MsG0680035782.01.T01:CDS | 50.0% | |
| AGGTGACAGATTGAGCACGA+AGG | - | Chr6:112184131-112184150 | None:intergenic | 50.0% | |
| ATAGATGCCACAGTGGCAGT+GGG | - | Chr6:112184459-112184478 | None:intergenic | 50.0% | |
| ATTGGAGGCAGCAGAAGCAA+TGG | - | Chr6:112184241-112184260 | None:intergenic | 50.0% | |
| ATTGGGAACAACAGGCTCGT+CGG | + | Chr6:112184976-112184995 | MsG0680035782.01.T01:CDS | 50.0% | |
| CAAATCGTCCGAGAAATGCG+AGG | + | Chr6:112184571-112184590 | MsG0680035782.01.T01:CDS | 50.0% | |
| GAGCATTCCATGTGGCAATG+TGG | - | Chr6:112184311-112184330 | None:intergenic | 50.0% | |
| GCGGAAAACCTCGCATTTCT+CGG | - | Chr6:112184582-112184601 | None:intergenic | 50.0% | |
| GGAAATTGTCCGCAGACAGT+TGG | + | Chr6:112184756-112184775 | MsG0680035782.01.T01:CDS | 50.0% | |
| GGTGATGTGGAACTTGCATC+AGG | + | Chr6:112183796-112183815 | MsG0680035782.01.T01:CDS | 50.0% | |
| TAAGCCCGCACAACAAACCT+GGG | - | Chr6:112184931-112184950 | None:intergenic | 50.0% | |
| TATCCCCATAGATGCCACAG+TGG | - | Chr6:112184466-112184485 | None:intergenic | 50.0% | |
| TATTATACGCTTGACGGCGG+CGG | + | Chr6:112184704-112184723 | MsG0680035782.01.T01:CDS | 50.0% | |
| TGCTCAATCTGTCACCTACC+CGG | + | Chr6:112184134-112184153 | MsG0680035782.01.T01:CDS | 50.0% | |
| TTAAGCCCGCACAACAAACC+TGG | - | Chr6:112184932-112184951 | None:intergenic | 50.0% | |
| ! | ATGATGATGAGGTGGCAGTG+GGG | + | Chr6:112184657-112184676 | MsG0680035782.01.T01:CDS | 50.0% |
| ! | CTATGATGATGAGGTGGCAG+TGG | + | Chr6:112184655-112184674 | MsG0680035782.01.T01:CDS | 50.0% |
| ! | GGCGCAGCTAGCTTAATCAA+CGG | - | Chr6:112184363-112184382 | None:intergenic | 50.0% |
| ! | GTTAGGCCTTTTATCAGCCC+AGG | + | Chr6:112184911-112184930 | MsG0680035782.01.T01:CDS | 50.0% |
| ! | TTATATGGTGGGAATGCCGG+TGG | + | Chr6:112184842-112184861 | MsG0680035782.01.T01:CDS | 50.0% |
| ! | TTCACATTCGCCGCCACTTT+CGG | - | Chr6:112184810-112184829 | None:intergenic | 50.0% |
| !! | ATCAGCCCAGGTTTGTTGTG+CGG | + | Chr6:112184923-112184942 | MsG0680035782.01.T01:CDS | 50.0% |
| !! | GGATTTTGCGGGCTTTGGTT+AGG | + | Chr6:112184894-112184913 | MsG0680035782.01.T01:CDS | 50.0% |
| !!! | CCGAGTCGGGAGTGTTTTTT+TGG | + | Chr6:112184330-112184349 | MsG0680035782.01.T01:CDS | 50.0% |
| !!! | CGGGAGTGTTTTTTTGGGTG+GGG | + | Chr6:112184336-112184355 | MsG0680035782.01.T01:CDS | 50.0% |
| !!! | GGGAGTGTTTTTTTGGGTGG+GGG | + | Chr6:112184337-112184356 | MsG0680035782.01.T01:CDS | 50.0% |
| !!! | GTCGGGAGTGTTTTTTTGGG+TGG | + | Chr6:112184334-112184353 | MsG0680035782.01.T01:CDS | 50.0% |
| ACACCGCAACCAACTGTCTG+CGG | - | Chr6:112184768-112184787 | None:intergenic | 55.0% | |
| ACGCGTATTGGGAATGCGCT+GGG | + | Chr6:112184546-112184565 | MsG0680035782.01.T01:CDS | 55.0% | |
| ACGGCGAGTCCCATAGAAGA+CGG | - | Chr6:112184522-112184541 | None:intergenic | 55.0% | |
| CACATGGAATGCTCCGAGTC+GGG | + | Chr6:112184317-112184336 | MsG0680035782.01.T01:CDS | 55.0% | |
| CACTGCCACTGTGGCATCTA+TGG | + | Chr6:112184458-112184477 | MsG0680035782.01.T01:CDS | 55.0% | |
| CATAGATGCCACAGTGGCAG+TGG | - | Chr6:112184460-112184479 | None:intergenic | 55.0% | |
| CCACATGGAATGCTCCGAGT+CGG | + | Chr6:112184316-112184335 | MsG0680035782.01.T01:CDS | 55.0% | |
| CTGCCACTGTGGCATCTATG+GGG | + | Chr6:112184460-112184479 | MsG0680035782.01.T01:CDS | 55.0% | |
| TAGATGCCACAGTGGCAGTG+GGG | - | Chr6:112184458-112184477 | None:intergenic | 55.0% | |
| TCGCCGTTTCGACGCGTATT+GGG | + | Chr6:112184535-112184554 | MsG0680035782.01.T01:CDS | 55.0% | |
| TGTCCGCAGACAGTTGGTTG+CGG | + | Chr6:112184762-112184781 | MsG0680035782.01.T01:CDS | 55.0% | |
| TTGGGAACAACAGGCTCGTC+GGG | + | Chr6:112184977-112184996 | MsG0680035782.01.T01:CDS | 55.0% | |
| ! | CGGTTTGTTTGGAGTGGTGG+TGG | + | Chr6:112184394-112184413 | MsG0680035782.01.T01:CDS | 55.0% |
| ! | TGATGATGAGGTGGCAGTGG+GGG | + | Chr6:112184658-112184677 | MsG0680035782.01.T01:CDS | 55.0% |
| !! | TCAGCCCAGGTTTGTTGTGC+GGG | + | Chr6:112184924-112184943 | MsG0680035782.01.T01:CDS | 55.0% |
| !! | TGGCGGTTGGGCTTGCTTTT+TGG | + | Chr6:112184862-112184881 | MsG0680035782.01.T01:CDS | 55.0% |
| !! | TTGGTTGCGGTGTTGTCCGA+GGG | + | Chr6:112184775-112184794 | MsG0680035782.01.T01:CDS | 55.0% |
| AAAGCAAGCCCAACCGCCAC+CGG | - | Chr6:112184861-112184880 | None:intergenic | 60.0% | |
| AGCTGCGCCGAGCTGTGTTT+CGG | + | Chr6:112184374-112184393 | MsG0680035782.01.T01:CDS | 60.0% | |
| CTCGCCGTTTCGACGCGTAT+TGG | + | Chr6:112184534-112184553 | MsG0680035782.01.T01:CDS | 60.0% | |
| GACGCGTATTGGGAATGCGC+TGG | + | Chr6:112184545-112184564 | MsG0680035782.01.T01:CDS | 60.0% | |
| GTGGGGTCCACATTGCCACA+TGG | + | Chr6:112184301-112184320 | MsG0680035782.01.T01:CDS | 60.0% | |
| ! | TATGGTGGGAATGCCGGTGG+CGG | + | Chr6:112184845-112184864 | MsG0680035782.01.T01:CDS | 60.0% |
| !! | CCGACTCGGAGCATTCCATG+TGG | - | Chr6:112184319-112184338 | None:intergenic | 60.0% |
| !! | GTTGGTTGCGGTGTTGTCCG+AGG | + | Chr6:112184774-112184793 | MsG0680035782.01.T01:CDS | 60.0% |
| !!! | GCGGCGGCATTGCCGATTTT+AGG | + | Chr6:112184720-112184739 | MsG0680035782.01.T01:CDS | 60.0% |
| AGGGACAGCGAGGCCGAAAG+TGG | + | Chr6:112184794-112184813 | MsG0680035782.01.T01:CDS | 65.0% | |
| CTTTCGGCCTCGCTGTCCCT+CGG | - | Chr6:112184794-112184813 | None:intergenic | 65.0% | |
| GACAGCGAGGCCGAAAGTGG+CGG | + | Chr6:112184797-112184816 | MsG0680035782.01.T01:CDS | 65.0% | |
| GTGTTGTCCGAGGGACAGCG+AGG | + | Chr6:112184784-112184803 | MsG0680035782.01.T01:CDS | 65.0% | |
| TGTGGACCCCACTGCCACTG+TGG | + | Chr6:112184449-112184468 | MsG0680035782.01.T01:CDS | 65.0% | |
| ! | TGGGAATGCCGGTGGCGGTT+GGG | + | Chr6:112184850-112184869 | MsG0680035782.01.T01:CDS | 65.0% |
| ! | GTGGGAATGCCGGTGGCGGT+TGG | + | Chr6:112184849-112184868 | MsG0680035782.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 112183652 | 112185085 | 112183652 | ID=MsG0680035782.01;Name=MsG0680035782.01 |
| Chr6 | mRNA | 112183652 | 112185085 | 112183652 | ID=MsG0680035782.01.T01;Parent=MsG0680035782.01;Name=MsG0680035782.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|477 |
| Chr6 | exon | 112183652 | 112185085 | 112183652 | ID=MsG0680035782.01.T01:exon:15037;Parent=MsG0680035782.01.T01 |
| Chr6 | CDS | 112183652 | 112185085 | 112183652 | ID=MsG0680035782.01.T01:cds;Parent=MsG0680035782.01.T01 |
| Gene Sequence |
| Protein sequence |
