AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036173.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036173.01.T01 MTR_5g097010 63.366 101 4 1 87 154 377 477 9.04e-30 115
MsG0780036173.01.T01 MTR_3g082150 56.436 101 11 1 87 154 376 476 2.94e-26 105
MsG0780036173.01.T01 MTR_4g066660 96.000 50 2 0 154 203 496 545 1.95e-24 100
MsG0780036173.01.T01 MTR_4g009290 92.000 50 4 0 154 203 194 243 6.03e-24 95.5
MsG0780036173.01.T01 MTR_5g089200 44.330 97 48 2 12 103 155 250 1.42e-13 68.9
MsG0780036173.01.T01 MTR_5g089280 43.299 97 49 2 12 103 163 258 3.06e-12 65.1
MsG0780036173.01.T01 MTR_5g089280 43.299 97 49 2 12 103 163 258 3.44e-12 64.7
MsG0780036173.01.T01 MTR_6g014000 58.824 51 21 0 100 150 270 320 9.05e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036173.01.T01 AT5G48300 54.455 101 13 1 87 154 382 482 2.86e-25 102
MsG0780036173.01.T01 AT2G31500 73.810 42 11 0 154 195 494 535 5.48e-14 70.1

Find 34 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCCCTTCTGAGGGGCATTT+TGG 0.198411 7:-4259601 MsG0780036173.01.T01:five_prime_UTR
CGGGGAAGGATGTGTGATTA+AGG 0.317043 7:-4254366 MsG0780036173.01.T01:intron
TGCCCCTCAGAAGGGCAAAA+AGG 0.366423 7:+4259607 None:intergenic
GACAAGAGGAGATTGGAAAA+TGG 0.375067 7:-4253018 MsG0780036173.01.T01:CDS
GATATCACTGATAGTGTTAT+CGG 0.379793 7:-4254386 MsG0780036173.01.T01:CDS
CGTCTATGTTTCTTAATCTC+AGG 0.392267 7:-4258175 MsG0780036173.01.T01:CDS
GGCAGTGTTCCACTTGGTAT+TGG 0.399314 7:-4253926 MsG0780036173.01.T01:CDS
GTTGACAAGAATGCTAGAAT+TGG 0.404186 7:-4253875 MsG0780036173.01.T01:CDS
TGATGAAGACAAGAGGAGAT+TGG 0.460581 7:-4253025 MsG0780036173.01.T01:CDS
ATATCACTGATAGTGTTATC+GGG 0.469841 7:-4254385 MsG0780036173.01.T01:CDS
TTTAAGAAGCGCAAGTCTCT+TGG 0.484148 7:-4258079 MsG0780036173.01.T01:CDS
GAATTTGATCTGAATGGTGC+TGG 0.498159 7:-4258932 MsG0780036173.01.T01:CDS
ATGGTTGAATTTGATCTGAA+TGG 0.515568 7:-4258938 MsG0780036173.01.T01:CDS
AATGTTTAAAGACAAATCTA+CGG 0.528586 7:-4252949 MsG0780036173.01.T01:CDS
GTCTGTTTAAGAAGATACAT+AGG 0.541179 7:-4258964 MsG0780036173.01.T01:five_prime_UTR
TTACCAAAATGCCCCTCAGA+AGG 0.546926 7:+4259598 None:intergenic
CAACATTGAAGATTATGAAG+AGG 0.549840 7:-4258349 MsG0780036173.01.T01:CDS
GTCTCTTGGTGCCTTAGCGA+TGG 0.562521 7:-4258065 MsG0780036173.01.T01:intron
TTATGAAGAGGATTTGAAGC+CGG 0.569826 7:-4258337 MsG0780036173.01.T01:intron
ACTGATAGTGTTATCGGGGA+AGG 0.575346 7:-4254380 MsG0780036173.01.T01:CDS
ATGTTTAAAGACAAATCTAC+GGG 0.579761 7:-4252948 MsG0780036173.01.T01:CDS
AATTAAGTTCAGAGGAGTAG+AGG 0.591705 7:-4258385 MsG0780036173.01.T01:CDS
GATAAGAAAATGAATGTCCG+TGG 0.595900 7:-4259636 None:intergenic
TCTGTTTAAGAAGATACATA+GGG 0.597081 7:-4258963 MsG0780036173.01.T01:five_prime_UTR
AGAGCTGCAATTAAGTTCAG+AGG 0.598621 7:-4258393 MsG0780036173.01.T01:CDS
GCATCAAGCATCTTCGACAG+AGG 0.603100 7:+4254410 None:intergenic
GCTAAAGGCAGTGTTCCACT+TGG 0.607159 7:-4253932 MsG0780036173.01.T01:CDS
TACCAAAATGCCCCTCAGAA+GGG 0.620664 7:+4259599 None:intergenic
TAAGAAGATACATAGGGACA+TGG 0.636534 7:-4258957 MsG0780036173.01.T01:exon
AAGGCAATGATGAAGACAAG+AGG 0.640920 7:-4253032 MsG0780036173.01.T01:CDS
TAGAATTGGAGAAAATGTGA+AGG 0.647495 7:-4253861 MsG0780036173.01.T01:intron
TTGATCTGAATGGTGCTGGA+TGG 0.654084 7:-4258928 MsG0780036173.01.T01:intron
TATCACTGATAGTGTTATCG+GGG 0.674328 7:-4254384 MsG0780036173.01.T01:CDS
GAGTTTCTGCCAATACCAAG+TGG 0.682922 7:+4253917 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATATTATATTATGATG+TGG - Chr7:4254847-4254866 MsG0780036173.01.T01:intron 10.0%
!!! AATAAGTTTTATATTTGTTT+TGG + Chr7:4259150-4259169 None:intergenic 10.0%
!!! TGGAATTTTAAAAAAATATT+TGG - Chr7:4256202-4256221 MsG0780036173.01.T01:intron 10.0%
!!! TTTCTTCTATATTATTTTAA+TGG - Chr7:4257132-4257151 MsG0780036173.01.T01:intron 10.0%
!! AAAAAAATATTTGGTTGATT+TGG - Chr7:4256211-4256230 MsG0780036173.01.T01:intron 15.0%
!! AAAAATATTCTCAACATTAA+AGG + Chr7:4253985-4254004 None:intergenic 15.0%
!! AAATTGAATGTATAAATTGT+AGG - Chr7:4253892-4253911 MsG0780036173.01.T01:CDS 15.0%
!! AATAATTGATTGAAAACTAT+AGG + Chr7:4254298-4254317 None:intergenic 15.0%
!! AATTGAATGTATAAATTGTA+GGG - Chr7:4253893-4253912 MsG0780036173.01.T01:CDS 15.0%
!! TAAAAAATTTACACTTTAGT+AGG + Chr7:4255133-4255152 None:intergenic 15.0%
!! TATAATGAAAAAAATGAACT+TGG - Chr7:4259228-4259247 MsG0780036173.01.T01:intron 15.0%
!! TTAATTCAATTATGTTATGA+TGG - Chr7:4256626-4256645 MsG0780036173.01.T01:intron 15.0%
!!! AAATTTCATTCATTCTTTTA+TGG - Chr7:4254075-4254094 MsG0780036173.01.T01:intron 15.0%
!!! ATCTAATATTGTTTTGTTAA+AGG - Chr7:4259478-4259497 MsG0780036173.01.T01:intron 15.0%
!!! GTATTGATTTATTTATTTCT+GGG - Chr7:4255542-4255561 MsG0780036173.01.T01:intron 15.0%
!!! TAATGTTGAGAATATTTTTT+CGG - Chr7:4253986-4254005 MsG0780036173.01.T01:intron 15.0%
!!! TTCTTTTCACATATAATAAT+AGG + Chr7:4253009-4253028 None:intergenic 15.0%
!! AAAAAACAGAAAACAAAAGA+AGG - Chr7:4253032-4253051 MsG0780036173.01.T01:CDS 20.0%
!! AAAAACAGAAAACAAAAGAA+GGG - Chr7:4253033-4253052 MsG0780036173.01.T01:CDS 20.0%
!! AATGTTCATGTTGAAATATT+TGG - Chr7:4256707-4256726 MsG0780036173.01.T01:intron 20.0%
!! AATGTTTAAAGACAAATCTA+CGG - Chr7:4259610-4259629 MsG0780036173.01.T01:five_prime_UTR 20.0%
!! AATTAAGCTTTCTTTGAATA+AGG + Chr7:4253457-4253476 None:intergenic 20.0%
!! AATTTCAATTTCTCAATGAA+GGG - Chr7:4253406-4253425 MsG0780036173.01.T01:intron 20.0%
!! ATCAATTGAAGTCAATAATT+TGG + Chr7:4255172-4255191 None:intergenic 20.0%
!! CAATTCAAGATACAAAAAAA+AGG + Chr7:4254322-4254341 None:intergenic 20.0%
!! CGAATTTGGAAAAAAAAATT+TGG - Chr7:4255904-4255923 MsG0780036173.01.T01:intron 20.0%
!! GTTAAAAAATTTACACTAGT+AGG + Chr7:4254982-4255001 None:intergenic 20.0%
!! TAAAATCTAATTGATACTGA+TGG - Chr7:4255726-4255745 MsG0780036173.01.T01:intron 20.0%
!! TAAGAATTGATCAAAATAGA+AGG - Chr7:4257906-4257925 MsG0780036173.01.T01:intron 20.0%
!! TTCATTGAGAAATTGAAATT+GGG + Chr7:4253406-4253425 None:intergenic 20.0%
!! TTCTATTCACATGTAAATAA+AGG + Chr7:4257527-4257546 None:intergenic 20.0%
!! TTGTTCTTTATGTTATGTAA+TGG + Chr7:4257554-4257573 None:intergenic 20.0%
!!! AAATTTTGTCTATTTTCCAA+TGG + Chr7:4256403-4256422 None:intergenic 20.0%
!!! AAATTTTTTAACACTGTCAT+AGG - Chr7:4255143-4255162 MsG0780036173.01.T01:intron 20.0%
!!! AATATTGTTTTGTTAAAGGA+TGG - Chr7:4259482-4259501 MsG0780036173.01.T01:intron 20.0%
!!! AATGTTGAGAATATTTTTTC+GGG - Chr7:4253987-4254006 MsG0780036173.01.T01:intron 20.0%
!!! AATTTTAACTTCAATGTGAA+TGG - Chr7:4254701-4254720 MsG0780036173.01.T01:intron 20.0%
!!! AGCTTTCTATTGATAATTTT+TGG - Chr7:4256122-4256141 MsG0780036173.01.T01:intron 20.0%
!!! ATATTTGTTTTGGATAATGA+TGG + Chr7:4259140-4259159 None:intergenic 20.0%
!!! ATCTAAATTCTAAAGCATTA+TGG + Chr7:4255337-4255356 None:intergenic 20.0%
!!! ATGGATTAGAAAGTAAAATA+GGG + Chr7:4258757-4258776 None:intergenic 20.0%
!!! GGTATTGATTTATTTATTTC+TGG - Chr7:4255541-4255560 MsG0780036173.01.T01:intron 20.0%
!!! GTTATTGAAATTTTTGCAAA+TGG - Chr7:4255520-4255539 MsG0780036173.01.T01:intron 20.0%
!!! TATTGATAATTTTTGGTTTG+TGG - Chr7:4256129-4256148 MsG0780036173.01.T01:intron 20.0%
!!! TGTAAATTTTTTAACAGTCT+AGG - Chr7:4254987-4255006 MsG0780036173.01.T01:intron 20.0%
!!! TGTAATTGTTTTATGATGAA+TGG - Chr7:4253931-4253950 MsG0780036173.01.T01:CDS 20.0%
!!! TTAACAGACTTTAATTTTTG+TGG - Chr7:4255814-4255833 MsG0780036173.01.T01:intron 20.0%
!!! TTAGTTATTCTTTTGAGTTT+TGG - Chr7:4256182-4256201 MsG0780036173.01.T01:intron 20.0%
! AAAACAGAAAACAAAAGAAG+GGG - Chr7:4253034-4253053 MsG0780036173.01.T01:CDS 25.0%
! AAATCAGATACAAAGGAAAA+TGG + Chr7:4253683-4253702 None:intergenic 25.0%
! AACTAGATAAATCTTTGATG+TGG - Chr7:4255403-4255422 MsG0780036173.01.T01:intron 25.0%
! AATTTCTGTCTTCTTTCTAA+TGG + Chr7:4256581-4256600 None:intergenic 25.0%
! ACTTAAAAAGACCAAAGATT+AGG + Chr7:4258837-4258856 None:intergenic 25.0%
! AGAAAGCTTAATTGAAAGTA+TGG - Chr7:4253464-4253483 MsG0780036173.01.T01:intron 25.0%
! AGTTGGTTAAATATACCAAA+AGG + Chr7:4257755-4257774 None:intergenic 25.0%
! ATATATCCATGTAACAAAAC+TGG + Chr7:4255078-4255097 None:intergenic 25.0%
! ATATATCCATGTACAAAAAC+TGG + Chr7:4254930-4254949 None:intergenic 25.0%
! ATGTTTAAAGACAAATCTAC+GGG - Chr7:4259611-4259630 MsG0780036173.01.T01:five_prime_UTR 25.0%
! CAATTTCAATTTCTCAATGA+AGG - Chr7:4253405-4253424 MsG0780036173.01.T01:intron 25.0%
! CTAAAAACATACACAATCTA+AGG + Chr7:4256073-4256092 None:intergenic 25.0%
! CTTCATTGAGAAATTGAAAT+TGG + Chr7:4253407-4253426 None:intergenic 25.0%
! GACAAAATTTAACACGAAAT+AGG - Chr7:4256413-4256432 MsG0780036173.01.T01:intron 25.0%
! TAAATCTTTGATGTGGTATT+TGG - Chr7:4255410-4255429 MsG0780036173.01.T01:intron 25.0%
! TATGATAATTTCATCCCATA+AGG - Chr7:4253846-4253865 MsG0780036173.01.T01:intron 25.0%
! TATTAAGCTTGACAAATTGT+TGG - Chr7:4258784-4258803 MsG0780036173.01.T01:intron 25.0%
! TCACATATAATAATAGGCAA+GGG + Chr7:4253003-4253022 None:intergenic 25.0%
! TCATTGAGAAATTGAAATTG+GGG + Chr7:4253405-4253424 None:intergenic 25.0%
! TCTGTTTAAGAAGATACATA+GGG - Chr7:4253596-4253615 MsG0780036173.01.T01:intron 25.0%
! TGTAAATCATTTCTGTTTGA+TGG - Chr7:4253548-4253567 MsG0780036173.01.T01:intron 25.0%
! TGTTGTGATTTAAATGAGTT+TGG - Chr7:4254340-4254359 MsG0780036173.01.T01:intron 25.0%
! TTACATAGAACATACCTTAT+GGG + Chr7:4253863-4253882 None:intergenic 25.0%
! TTCACATATAATAATAGGCA+AGG + Chr7:4253004-4253023 None:intergenic 25.0%
! TTTACATAGAACATACCTTA+TGG + Chr7:4253864-4253883 None:intergenic 25.0%
! TTTAGAAGCAAAGGAAATTA+AGG - Chr7:4253311-4253330 MsG0780036173.01.T01:intron 25.0%
! TTTGTTAAAGCTATCTAATC+TGG + Chr7:4259174-4259193 None:intergenic 25.0%
!! AAAAAGCTATTTCACAATAC+TGG + Chr7:4253718-4253737 None:intergenic 25.0%
!! AAAGCTTAATTGAAAGTATG+GGG - Chr7:4253466-4253485 MsG0780036173.01.T01:intron 25.0%
!! AATTAACTTGAAATAGGCTT+TGG - Chr7:4256597-4256616 MsG0780036173.01.T01:intron 25.0%
!! ACATAAAGAACAAAAAGTGT+TGG - Chr7:4257561-4257580 MsG0780036173.01.T01:intron 25.0%
!! ATTCAAAATTTTGTGATGCT+TGG - Chr7:4257192-4257211 MsG0780036173.01.T01:intron 25.0%
!! ATTTTCCTTTGTATCTGATT+TGG - Chr7:4253682-4253701 MsG0780036173.01.T01:intron 25.0%
!! GAAAGCTTAATTGAAAGTAT+GGG - Chr7:4253465-4253484 MsG0780036173.01.T01:intron 25.0%
!! GACAGAAATTAACTTGAAAT+AGG - Chr7:4256591-4256610 MsG0780036173.01.T01:intron 25.0%
!! TCATTAGTGTGTATCATTTT+TGG - Chr7:4258067-4258086 MsG0780036173.01.T01:CDS 25.0%
!! TCTGAAAATCAATTTGTTTC+AGG - Chr7:4253954-4253973 MsG0780036173.01.T01:CDS 25.0%
!! TGTCAATTTTTGAATCCTTT+TGG - Chr7:4257737-4257756 MsG0780036173.01.T01:intron 25.0%
!! TTTTACCAAATCAGATACAA+AGG + Chr7:4253690-4253709 None:intergenic 25.0%
!! TTTTTCCAAATTCGAAAACT+CGG + Chr7:4255898-4255917 None:intergenic 25.0%
!!! ACATCTTTTTTTCTTCTGTT+TGG - Chr7:4255268-4255287 MsG0780036173.01.T01:intron 25.0%
!!! AGAAGCTGATAAAAGTTTTT+TGG - Chr7:4258602-4258621 MsG0780036173.01.T01:intron 25.0%
!!! AGTAAGTTTTGAGGAATTTA+AGG - Chr7:4259508-4259527 MsG0780036173.01.T01:intron 25.0%
!!! AGTCATGATTGTGTTATTTT+TGG - Chr7:4258044-4258063 MsG0780036173.01.T01:intron 25.0%
!!! ATGTTGAGAATATTTTTTCG+GGG - Chr7:4253988-4254007 MsG0780036173.01.T01:intron 25.0%
!!! ATTTCCTTTGCTTCTAAAAT+CGG + Chr7:4253309-4253328 None:intergenic 25.0%
!!! CATTAGTGTGTATCATTTTT+GGG - Chr7:4258068-4258087 MsG0780036173.01.T01:CDS 25.0%
!!! CATTTTGGTAAATTGGTAAT+TGG - Chr7:4252973-4252992 MsG0780036173.01.T01:CDS 25.0%
!!! CTTTAATTTTTGTGGTTTTG+TGG - Chr7:4255822-4255841 MsG0780036173.01.T01:intron 25.0%
!!! GATGGATTAGAAAGTAAAAT+AGG + Chr7:4258758-4258777 None:intergenic 25.0%
!!! GATTTATTTATTTCTGGGAA+TGG - Chr7:4255547-4255566 MsG0780036173.01.T01:intron 25.0%
!!! TTATCTAGTTGATTTTTCTG+TGG + Chr7:4255393-4255412 None:intergenic 25.0%
AAAATCTGCTCTAATGTAGT+TGG - Chr7:4256684-4256703 MsG0780036173.01.T01:intron 30.0%
AAACAGAAAACAAAAGAAGG+GGG - Chr7:4253035-4253054 MsG0780036173.01.T01:CDS 30.0%
AAATTGCATGTCGTTAGAAA+AGG - Chr7:4253113-4253132 MsG0780036173.01.T01:intron 30.0%
AACCATCATACACATAAGAA+AGG + Chr7:4255589-4255608 None:intergenic 30.0%
AATTGCATGTCGTTAGAAAA+GGG - Chr7:4253114-4253133 MsG0780036173.01.T01:intron 30.0%
ACAAATCCTTCTCTATCAAT+TGG + Chr7:4256271-4256290 None:intergenic 30.0%
AGAAAATCAATGTTGCAGTT+AGG + Chr7:4258571-4258590 None:intergenic 30.0%
AGTTTGGAGGAATTTATTTC+AGG - Chr7:4254356-4254375 MsG0780036173.01.T01:intron 30.0%
ATAAGTCTACTTCAATTGAG+AGG + Chr7:4257709-4257728 None:intergenic 30.0%
ATGGTTGAATTTGATCTGAA+TGG - Chr7:4253621-4253640 MsG0780036173.01.T01:intron 30.0%
ATTGAAGACACTTTGTTGAT+GGG - Chr7:4258390-4258409 MsG0780036173.01.T01:CDS 30.0%
CAACATTGAAGATTATGAAG+AGG - Chr7:4254210-4254229 MsG0780036173.01.T01:intron 30.0%
CACACCTTCAATAAAAATGT+CGG + Chr7:4258962-4258981 None:intergenic 30.0%
CACATATAATAATAGGCAAG+GGG + Chr7:4253002-4253021 None:intergenic 30.0%
GAAGGAAATCAGGTTATATT+CGG + Chr7:4259095-4259114 None:intergenic 30.0%
GGTCTATGATGGTTAAAATT+TGG - Chr7:4255493-4255512 MsG0780036173.01.T01:intron 30.0%
GTAAAAATCTGAACTGTTGT+TGG - Chr7:4256503-4256522 MsG0780036173.01.T01:intron 30.0%
GTAGTTTGATTATTGTGATC+TGG - Chr7:4254581-4254600 MsG0780036173.01.T01:intron 30.0%
GTCTGTTTAAGAAGATACAT+AGG - Chr7:4253595-4253614 MsG0780036173.01.T01:intron 30.0%
TAAGTCTACTTCAATTGAGA+GGG + Chr7:4257708-4257727 None:intergenic 30.0%
TACAAACCAATTGATAGAGA+AGG - Chr7:4256262-4256281 MsG0780036173.01.T01:intron 30.0%
TAGAATTGGAGAAAATGTGA+AGG - Chr7:4258698-4258717 MsG0780036173.01.T01:intron 30.0%
TAGACCTACTGTTAGAAAAA+TGG - Chr7:4256334-4256353 MsG0780036173.01.T01:intron 30.0%
TATAACCTGATTTCCTTCAT+AGG - Chr7:4259097-4259116 MsG0780036173.01.T01:intron 30.0%
TATTGAAGACACTTTGTTGA+TGG - Chr7:4258389-4258408 MsG0780036173.01.T01:CDS 30.0%
TCAAGCTTAATATGAGAAGA+TGG + Chr7:4258776-4258795 None:intergenic 30.0%
TCAATAGAAAGCTTGAACAA+AGG + Chr7:4256115-4256134 None:intergenic 30.0%
TCGCAGTTTATTATTAGTGT+TGG - Chr7:4259031-4259050 MsG0780036173.01.T01:intron 30.0%
TGGTACTAATGTGCATTTAA+AGG + Chr7:4257680-4257699 None:intergenic 30.0%
TGTGATTTAAATGAGTTTGG+AGG - Chr7:4254343-4254362 MsG0780036173.01.T01:intron 30.0%
TGTGTATGATGGTTCAAATT+TGG - Chr7:4255595-4255614 MsG0780036173.01.T01:intron 30.0%
TTCATACATCAGTTTGCAAT+AGG - Chr7:4256548-4256567 MsG0780036173.01.T01:intron 30.0%
TTGAGTGAAAATTGAACCAT+TGG - Chr7:4256384-4256403 MsG0780036173.01.T01:intron 30.0%
! AACAATTGCTCTTTTGATAC+GGG + Chr7:4258667-4258686 None:intergenic 30.0%
! AAGTTTTTCATGGCATACAA+AGG - Chr7:4254420-4254439 MsG0780036173.01.T01:CDS 30.0%
! ATATCACTGATAGTGTTATC+GGG - Chr7:4258174-4258193 MsG0780036173.01.T01:CDS 30.0%
! CAACAATTGCTCTTTTGATA+CGG + Chr7:4258668-4258687 None:intergenic 30.0%
! GATATCACTGATAGTGTTAT+CGG - Chr7:4258173-4258192 MsG0780036173.01.T01:CDS 30.0%
! GGAATGAAAGTGTATATAGT+TGG + Chr7:4258736-4258755 None:intergenic 30.0%
! GGTTATTAATTGATGACAAC+AGG - Chr7:4259249-4259268 MsG0780036173.01.T01:intron 30.0%
! GTGACATTGTAACTTTTGTA+AGG + Chr7:4255761-4255780 None:intergenic 30.0%
! GTTATTCCAGTTTTTGTACA+TGG - Chr7:4254921-4254940 MsG0780036173.01.T01:intron 30.0%
! TAATTGAAAGTATGGGGTTT+GGG - Chr7:4253472-4253491 MsG0780036173.01.T01:intron 30.0%
! TCATAAACACATTTTACCCA+AGG + Chr7:4256912-4256931 None:intergenic 30.0%
! TGGTTGTGTGATTTTGTTAA+AGG - Chr7:4256231-4256250 MsG0780036173.01.T01:intron 30.0%
! TTAATTGAAAGTATGGGGTT+TGG - Chr7:4253471-4253490 MsG0780036173.01.T01:intron 30.0%
! TTGATAGAGAAGGATTTGTT+TGG - Chr7:4256272-4256291 MsG0780036173.01.T01:intron 30.0%
!! ATGACCATTTTTCTAACAGT+AGG + Chr7:4256341-4256360 None:intergenic 30.0%
!! ATTTTTATTGAAGGTGTGTC+TGG - Chr7:4258964-4258983 MsG0780036173.01.T01:five_prime_UTR 30.0%
!! CACATGTAAATAAAGGTGTT+TGG + Chr7:4257520-4257539 None:intergenic 30.0%
!! GAAAGTGTTTCTTCAATTCA+TGG - Chr7:4257625-4257644 MsG0780036173.01.T01:intron 30.0%
!! GGTGGAATTTTAAGAAATGT+TGG - Chr7:4256299-4256318 MsG0780036173.01.T01:intron 30.0%
!!! AAAAGTTTTTTGGCTGCTAA+AGG - Chr7:4258612-4258631 MsG0780036173.01.T01:intron 30.0%
!!! ATGTTTGTTGTAGCACTTTT+GGG - Chr7:4257315-4257334 MsG0780036173.01.T01:intron 30.0%
!!! CAACTCTTTCAAGTTTTTCA+TGG - Chr7:4254410-4254429 MsG0780036173.01.T01:CDS 30.0%
!!! GGCATACAAAGGATTTTTTA+TGG - Chr7:4254431-4254450 MsG0780036173.01.T01:CDS 30.0%
!!! GGCTTGCAATTTTTTCTTAT+TGG - Chr7:4257238-4257257 MsG0780036173.01.T01:intron 30.0%
!!! GTTATTCCAGTTTTGTTACA+TGG - Chr7:4255069-4255088 MsG0780036173.01.T01:intron 30.0%
!!! TATGTTTGTTGTAGCACTTT+TGG - Chr7:4257314-4257333 MsG0780036173.01.T01:intron 30.0%
!!! TGATAATTTTTGGTTTGTGG+TGG - Chr7:4256132-4256151 MsG0780036173.01.T01:intron 30.0%
!!! TGGTTTTGTGGTTAATGTTA+AGG - Chr7:4255834-4255853 MsG0780036173.01.T01:intron 30.0%
!!! TGTTGAGAATATTTTTTCGG+GGG - Chr7:4253989-4254008 MsG0780036173.01.T01:intron 30.0%
!!! TGTTTTTAGTGAGTTGTGTA+TGG - Chr7:4256084-4256103 MsG0780036173.01.T01:intron 30.0%
AAAAAACCTTACCATCGCTA+AGG + Chr7:4254508-4254527 None:intergenic 35.0%
AAAATCTTCCATTCAGTGGT+GGG - Chr7:4258337-4258356 MsG0780036173.01.T01:intron 35.0%
AAACATAGATTGCCTTCTTG+CGG - Chr7:4258888-4258907 MsG0780036173.01.T01:intron 35.0%
AACATAGTTGCAAAACTCCA+AGG + Chr7:4257449-4257468 None:intergenic 35.0%
AACGAAGAACAACATAGAGA+TGG + Chr7:4257344-4257363 None:intergenic 35.0%
AATTAAGTTCAGAGGAGTAG+AGG - Chr7:4254174-4254193 MsG0780036173.01.T01:intron 35.0%
AATTGAAATTGGGGCTGAAA+AGG + Chr7:4253396-4253415 None:intergenic 35.0%
ACATAGTTGCAAAACTCCAA+GGG + Chr7:4257448-4257467 None:intergenic 35.0%
AGAAGAGAGAAGAGAGAAAA+GGG - Chr7:4253139-4253158 MsG0780036173.01.T01:intron 35.0%
ATGCAGCTCAATTCATTCAT+TGG - Chr7:4258520-4258539 MsG0780036173.01.T01:intron 35.0%
ATGCTAGAACTGATGATTCA+TGG + Chr7:4257374-4257393 None:intergenic 35.0%
ATTGAAATTGGGGCTGAAAA+GGG + Chr7:4253395-4253414 None:intergenic 35.0%
ATTTAACACGAAATAGGCTC+TGG - Chr7:4256419-4256438 MsG0780036173.01.T01:intron 35.0%
ATTTACACTAGTAGGAGATG+AGG + Chr7:4254974-4254993 None:intergenic 35.0%
CGCATGGAGTATAAGAAAAT+TGG - Chr7:4254799-4254818 MsG0780036173.01.T01:intron 35.0%
CGTCTATGTTTCTTAATCTC+AGG - Chr7:4254384-4254403 MsG0780036173.01.T01:CDS 35.0%
CTCACATGAAAGCTAACAAT+TGG - Chr7:4257776-4257795 MsG0780036173.01.T01:intron 35.0%
GAAGAAACAAGAAGAATTGG+AGG - Chr7:4253508-4253527 MsG0780036173.01.T01:intron 35.0%
GAGCATATTGTTGATCTGAA+AGG - Chr7:4256045-4256064 MsG0780036173.01.T01:intron 35.0%
GAGGAAGAAACAAGAAGAAT+TGG - Chr7:4253505-4253524 MsG0780036173.01.T01:intron 35.0%
GATGAACTCTTCACATTTGA+AGG + Chr7:4259296-4259315 None:intergenic 35.0%
GCTTTGCTTATTATGCATTC+AGG - Chr7:4255029-4255048 MsG0780036173.01.T01:intron 35.0%
GTTGACAAGAATGCTAGAAT+TGG - Chr7:4258684-4258703 MsG0780036173.01.T01:intron 35.0%
TAAGAAGATACATAGGGACA+TGG - Chr7:4253602-4253621 MsG0780036173.01.T01:intron 35.0%
TATCGCAGTTGAGTCTAAAT+TGG + Chr7:4258125-4258144 None:intergenic 35.0%
TATGGAAAACTCTTCGTGTA+AGG - Chr7:4257072-4257091 MsG0780036173.01.T01:intron 35.0%
TGCCTTTCTTATGTGTATGA+TGG - Chr7:4255584-4255603 MsG0780036173.01.T01:intron 35.0%
TGTTGTTGAAAGCTTTGCTT+TGG - Chr7:4255621-4255640 MsG0780036173.01.T01:intron 35.0%
TTACACTTTAGTAGGAGATG+AGG + Chr7:4255125-4255144 None:intergenic 35.0%
TTTCCTTCATAGGAAAGCTT+TGG - Chr7:4259107-4259126 MsG0780036173.01.T01:intron 35.0%
! AACACATTTTACCCAAGGTA+AGG + Chr7:4256907-4256926 None:intergenic 35.0%
! AAGGATTTGTTTGGTTATGG+TGG - Chr7:4256281-4256300 MsG0780036173.01.T01:intron 35.0%
! AATCCTTGTCATTTCAATCC+GGG + Chr7:4256740-4256759 None:intergenic 35.0%
! AGAGTGTTCAGAATAAGTCA+TGG - Chr7:4256859-4256878 MsG0780036173.01.T01:intron 35.0%
! ATGAATCATCAGTTCTAGCA+TGG - Chr7:4257373-4257392 MsG0780036173.01.T01:intron 35.0%
! ATGGAAGATTTTGCAGTTCT+AGG + Chr7:4258329-4258348 None:intergenic 35.0%
! CAAGTTTCAGTATTTTCGCA+TGG - Chr7:4254783-4254802 MsG0780036173.01.T01:intron 35.0%
! CAATCCTTGTCATTTCAATC+CGG + Chr7:4256741-4256760 None:intergenic 35.0%
! GAGAAGGATTTGTTTGGTTA+TGG - Chr7:4256278-4256297 MsG0780036173.01.T01:intron 35.0%
! TATCACTGATAGTGTTATCG+GGG - Chr7:4258175-4258194 MsG0780036173.01.T01:CDS 35.0%
! TTATGAAGAGGATTTGAAGC+CGG - Chr7:4254222-4254241 MsG0780036173.01.T01:intron 35.0%
! TTCAACCGAGTTTTCGAATT+TGG - Chr7:4255890-4255909 MsG0780036173.01.T01:intron 35.0%
!! AAGAACAAAAAGTGTTGGTC+AGG - Chr7:4257566-4257585 MsG0780036173.01.T01:intron 35.0%
!! ATTGGCTTGTGTAAGTTACA+AGG - Chr7:4258538-4258557 MsG0780036173.01.T01:intron 35.0%
!! TGCACCGACATTTTTATTGA+AGG - Chr7:4258955-4258974 MsG0780036173.01.T01:exon 35.0%
!!! TAATTTTTGGTTTGTGGTGG+AGG - Chr7:4256135-4256154 MsG0780036173.01.T01:intron 35.0%
!!! TGTGTGTAGAAGTACTTTTC+TGG - Chr7:4255963-4255982 MsG0780036173.01.T01:intron 35.0%
AACCATCATAGACCAGTCAT+TGG + Chr7:4255487-4255506 None:intergenic 40.0%
AAGACCAAAGATTAGGACAG+AGG + Chr7:4258830-4258849 None:intergenic 40.0%
AAGAGCAAGAGAAGAGAAGA+GGG - Chr7:4256787-4256806 MsG0780036173.01.T01:intron 40.0%
AAGGCAATGATGAAGACAAG+AGG - Chr7:4259527-4259546 MsG0780036173.01.T01:intron 40.0%
ACCATCATAGACCAGTCATT+GGG + Chr7:4255486-4255505 None:intergenic 40.0%
AGACCAAAGATTAGGACAGA+GGG + Chr7:4258829-4258848 None:intergenic 40.0%
AGAGCTGCAATTAAGTTCAG+AGG - Chr7:4254166-4254185 MsG0780036173.01.T01:intron 40.0%
ATATTCTTCCCCATACTCAC+CGG + Chr7:4254244-4254263 None:intergenic 40.0%
ATTCAGGTGTCTTTCTTGCT+GGG - Chr7:4255045-4255064 MsG0780036173.01.T01:intron 40.0%
CAAAATCTTCCATTCAGTGG+TGG - Chr7:4258336-4258355 MsG0780036173.01.T01:intron 40.0%
CAATGAGTGTTCACATGAGA+AGG - Chr7:4259317-4259336 MsG0780036173.01.T01:intron 40.0%
CATAGTTGCAAAACTCCAAG+GGG + Chr7:4257447-4257466 None:intergenic 40.0%
CTAGGCTTATGACTTTGTGA+TGG - Chr7:4255005-4255024 MsG0780036173.01.T01:intron 40.0%
CTGCAAAATCTTCCATTCAG+TGG - Chr7:4258333-4258352 MsG0780036173.01.T01:intron 40.0%
CTTCAATTGAGAGGGAGTTA+TGG + Chr7:4257700-4257719 None:intergenic 40.0%
GAATTTGATCTGAATGGTGC+TGG - Chr7:4253627-4253646 MsG0780036173.01.T01:intron 40.0%
GACAAGAGGAGATTGGAAAA+TGG - Chr7:4259541-4259560 MsG0780036173.01.T01:intron 40.0%
GAGAAGAGAGAAGAGAGAAA+AGG - Chr7:4253138-4253157 MsG0780036173.01.T01:intron 40.0%
GCATGAGTGATGAAGCAATA+TGG - Chr7:4257054-4257073 MsG0780036173.01.T01:intron 40.0%
GCATTCATGTCTTTCTTGCT+GGG - Chr7:4254897-4254916 MsG0780036173.01.T01:intron 40.0%
GCTTTCCTATGAAGGAAATC+AGG + Chr7:4259105-4259124 None:intergenic 40.0%
GGGCAAAAAGGTAATTTCCA+CGG + Chr7:4252943-4252962 None:intergenic 40.0%
TAAGAGCAAGAGAAGAGAAG+AGG - Chr7:4256786-4256805 MsG0780036173.01.T01:intron 40.0%
TATGATGTGGCTACTTGTGA+TGG - Chr7:4254860-4254879 MsG0780036173.01.T01:intron 40.0%
TCCACTTCACAACTTATCTG+CGG + Chr7:4257837-4257856 None:intergenic 40.0%
TGATGAAGACAAGAGGAGAT+TGG - Chr7:4259534-4259553 MsG0780036173.01.T01:intron 40.0%
TGCATTCATGTCTTTCTTGC+TGG - Chr7:4254896-4254915 MsG0780036173.01.T01:intron 40.0%
TTAGCTTAGAGCCTTACCTT+GGG - Chr7:4256893-4256912 MsG0780036173.01.T01:intron 40.0%
TTATCCAAGTCGACATCGTT+GGG + Chr7:4259375-4259394 None:intergenic 40.0%
! AATGTGACTTGCCAAACTCA+GGG - Chr7:4255675-4255694 MsG0780036173.01.T01:intron 40.0%
! ATGTGTAAAGCTCTAATGCC+AGG - Chr7:4257021-4257040 MsG0780036173.01.T01:intron 40.0%
! ATTACCTTTTTGCCCTTCTG+AGG - Chr7:4252948-4252967 MsG0780036173.01.T01:CDS 40.0%
! TGACAACAGGCAGATTTTGA+TGG - Chr7:4259262-4259281 MsG0780036173.01.T01:intron 40.0%
! TGTGTAAAGCTCTAATGCCA+GGG - Chr7:4257022-4257041 MsG0780036173.01.T01:intron 40.0%
! TTACCTTTTTGCCCTTCTGA+GGG - Chr7:4252949-4252968 MsG0780036173.01.T01:CDS 40.0%
! TTAGCTTTCATGTGAGCAGT+TGG + Chr7:4257772-4257791 None:intergenic 40.0%
! TTTAAGAAGCGCAAGTCTCT+TGG - Chr7:4254480-4254499 MsG0780036173.01.T01:intron 40.0%
! TTTAGCTTAGAGCCTTACCT+TGG - Chr7:4256892-4256911 MsG0780036173.01.T01:intron 40.0%
!! ATGTCGACTTGGATAAGGTA+AGG - Chr7:4259379-4259398 MsG0780036173.01.T01:intron 40.0%
!! CAATGGCAAGAGCTTTGAAT+TGG - Chr7:4256822-4256841 MsG0780036173.01.T01:intron 40.0%
!! CAGGCAGATTTTGATGGAAA+TGG - Chr7:4259268-4259287 MsG0780036173.01.T01:intron 40.0%
!! GGTAAGGCTCTAAGCTAAAA+AGG + Chr7:4256891-4256910 None:intergenic 40.0%
!! TGGCTGTTTCTTCTTGTGAT+TGG - Chr7:4255288-4255307 MsG0780036173.01.T01:intron 40.0%
!!! TGAGGGGCATTTTGGTAAAT+TGG - Chr7:4252966-4252985 MsG0780036173.01.T01:CDS 40.0%
!!! TGCACCGATTTTAGAAGCAA+AGG - Chr7:4253302-4253321 MsG0780036173.01.T01:intron 40.0%
AAGCATACACTCCCAATGAC+TGG - Chr7:4255472-4255491 MsG0780036173.01.T01:intron 45.0%
AAGGGAACGAGAGAAAGAAG+AGG - Chr7:4253157-4253176 MsG0780036173.01.T01:intron 45.0%
AATTGGGGCTGAAAAGGGTT+AGG + Chr7:4253390-4253409 None:intergenic 45.0%
ACTCATGCTTTCTTCATCCC+TGG + Chr7:4257042-4257061 None:intergenic 45.0%
ACTCCCTCTGTCCTAATCTT+TGG - Chr7:4258823-4258842 MsG0780036173.01.T01:intron 45.0%
AGAGAAAGAAGAGGGAACGA+AGG - Chr7:4253166-4253185 MsG0780036173.01.T01:intron 45.0%
AGGGAACGAGAGAAAGAAGA+GGG - Chr7:4253158-4253177 MsG0780036173.01.T01:intron 45.0%
AGTGTTCACATGAGAAGGCT+TGG - Chr7:4259322-4259341 MsG0780036173.01.T01:intron 45.0%
ATCATGTGTATGCAACCCCT+TGG - Chr7:4257429-4257448 MsG0780036173.01.T01:intron 45.0%
ATTGGGGCTGAAAAGGGTTA+GGG + Chr7:4253389-4253408 None:intergenic 45.0%
CACACATGTTGCTGTCATGT+CGG + Chr7:4258993-4259012 None:intergenic 45.0%
CAGCCAAAGCTTTCCTATGA+AGG + Chr7:4259113-4259132 None:intergenic 45.0%
CATTCAGGTGTCTTTCTTGC+TGG - Chr7:4255044-4255063 MsG0780036173.01.T01:intron 45.0%
CCACTTCACAACTTATCTGC+GGG + Chr7:4257836-4257855 None:intergenic 45.0%
CTGCATTCTTGCATATCAGG+AGG - Chr7:4258360-4258379 MsG0780036173.01.T01:CDS 45.0%
CTTATCCAAGTCGACATCGT+TGG + Chr7:4259376-4259395 None:intergenic 45.0%
GAGAAAGAAGAGGGAACGAA+GGG - Chr7:4253167-4253186 MsG0780036173.01.T01:intron 45.0%
GAGTTTCTGCCAATACCAAG+TGG + Chr7:4258645-4258664 None:intergenic 45.0%
TACCAAAATGCCCCTCAGAA+GGG + Chr7:4252963-4252982 None:intergenic 45.0%
TGTTACTGTCGTCAAGGTCT+TGG - Chr7:4257217-4257236 MsG0780036173.01.T01:intron 45.0%
TTACCAAAATGCCCCTCAGA+AGG + Chr7:4252964-4252983 None:intergenic 45.0%
! ACTGATAGTGTTATCGGGGA+AGG - Chr7:4258179-4258198 MsG0780036173.01.T01:CDS 45.0%
! ATGGGGTTTGGGTTTGCAAT+TGG - Chr7:4253483-4253502 MsG0780036173.01.T01:intron 45.0%
! ATGTGACTTGCCAAACTCAG+GGG - Chr7:4255676-4255695 MsG0780036173.01.T01:intron 45.0%
! ATTTGAAGCCGGTGAGTATG+GGG - Chr7:4254233-4254252 MsG0780036173.01.T01:intron 45.0%
! GAAATATTTGGTTCACCGCC+CGG - Chr7:4256719-4256738 MsG0780036173.01.T01:intron 45.0%
! GAATGTGACTTGCCAAACTC+AGG - Chr7:4255674-4255693 MsG0780036173.01.T01:intron 45.0%
! GATTTGAAGCCGGTGAGTAT+GGG - Chr7:4254232-4254251 MsG0780036173.01.T01:intron 45.0%
! GGATGGTCGAGTAAGTTTTG+AGG - Chr7:4259499-4259518 MsG0780036173.01.T01:intron 45.0%
! TACCTTTTTGCCCTTCTGAG+GGG - Chr7:4252950-4252969 MsG0780036173.01.T01:CDS 45.0%
! TTGATCTGAATGGTGCTGGA+TGG - Chr7:4253631-4253650 MsG0780036173.01.T01:intron 45.0%
! TTGATGGGCGCATTATTACG+AGG - Chr7:4258405-4258424 MsG0780036173.01.T01:CDS 45.0%
! TTGGTGTGTTACTGTCGTCA+AGG - Chr7:4257211-4257230 MsG0780036173.01.T01:intron 45.0%
!! CAACGATGTCGACTTGGATA+AGG - Chr7:4259374-4259393 MsG0780036173.01.T01:intron 45.0%
!! TCCCAATGACTGGTCTATGA+TGG - Chr7:4255482-4255501 MsG0780036173.01.T01:intron 45.0%
!! ATATATATATATATATATCA+AGG - Chr7:4255245-4255264 MsG0780036173.01.T01:intron 5.0%
AACGACCCGTGAGTGAGAAA+TGG + Chr7:4256980-4256999 None:intergenic 50.0%
AAGAAGGGGGACGAGAGAAA+CGG - Chr7:4253048-4253067 MsG0780036173.01.T01:CDS 50.0%
ACGACCCGTGAGTGAGAAAT+GGG + Chr7:4256979-4256998 None:intergenic 50.0%
AGAGAAACGGGAGAGGAAGA+AGG - Chr7:4253061-4253080 MsG0780036173.01.T01:CDS 50.0%
AGAGAAGAGAAGAGGGCTGA+AGG - Chr7:4256794-4256813 MsG0780036173.01.T01:intron 50.0%
AGAGAGAACGGAAGAGGAGA+GGG - Chr7:4253229-4253248 MsG0780036173.01.T01:intron 50.0%
AGGACAGAGGGAGTAGATGA+TGG + Chr7:4258817-4258836 None:intergenic 50.0%
AGGCACAGAGAAGGATAGAC+TGG - Chr7:4257586-4257605 MsG0780036173.01.T01:intron 50.0%
ATCGGTGCAGATCAGAGTGT+TGG + Chr7:4253291-4253310 None:intergenic 50.0%
CCCGCAGATAAGTTGTGAAG+TGG - Chr7:4257833-4257852 MsG0780036173.01.T01:intron 50.0%
CGGGGAAGGATGTGTGATTA+AGG - Chr7:4258193-4258212 MsG0780036173.01.T01:intron 50.0%
CGGGGGTTATCAGTACTCTT+TGG - Chr7:4254006-4254025 MsG0780036173.01.T01:intron 50.0%
GAGAAACGGGAGAGGAAGAA+GGG - Chr7:4253062-4253081 MsG0780036173.01.T01:CDS 50.0%
GAGAAGAGAAGAGGGCTGAA+GGG - Chr7:4256795-4256814 MsG0780036173.01.T01:intron 50.0%
GCATCAAGCATCTTCGACAG+AGG + Chr7:4258152-4258171 None:intergenic 50.0%
GCTAAAGGCAGTGTTCCACT+TGG - Chr7:4258627-4258646 MsG0780036173.01.T01:intron 50.0%
GGACAGAGGGAGTAGATGAT+GGG + Chr7:4258816-4258835 None:intergenic 50.0%
GGCAGTGTTCCACTTGGTAT+TGG - Chr7:4258633-4258652 MsG0780036173.01.T01:intron 50.0%
GGCTGAAAAGGGTTAGGGTT+TGG + Chr7:4253384-4253403 None:intergenic 50.0%
GGGCTGCATTCTTGCATATC+AGG - Chr7:4258357-4258376 MsG0780036173.01.T01:CDS 50.0%
TACACTACGATGCCGCAAGA+AGG + Chr7:4258903-4258922 None:intergenic 50.0%
TCCCTCCCATTTCTCACTCA+CGG - Chr7:4256971-4256990 MsG0780036173.01.T01:intron 50.0%
TGAGTGAGAAATGGGAGGGA+GGG + Chr7:4256971-4256990 None:intergenic 50.0%
TGCTAGTAGTCCCCTGAGTT+TGG + Chr7:4255689-4255708 None:intergenic 50.0%
! CATTCCCAACGATGTCGACT+TGG - Chr7:4259368-4259387 MsG0780036173.01.T01:intron 50.0%
! CCTTGTCATTTCAATCCGGG+CGG + Chr7:4256737-4256756 None:intergenic 50.0%
! CTTTGGTTCATGCAGCTGCT+TGG - Chr7:4254023-4254042 MsG0780036173.01.T01:intron 50.0%
! GGATTTGAAGCCGGTGAGTA+TGG - Chr7:4254231-4254250 MsG0780036173.01.T01:intron 50.0%
! GGGTTTGGGTTTGCAATTGG+AGG - Chr7:4253486-4253505 MsG0780036173.01.T01:intron 50.0%
! GTTTGTGGTGGAGGAGTTTC+TGG - Chr7:4256144-4256163 MsG0780036173.01.T01:intron 50.0%
! TCTCCCGTTCCTGTTTCTCT+CGG + Chr7:4253194-4253213 None:intergenic 50.0%
! TTGGTGCCTTAGCGATGGTA+AGG - Chr7:4254499-4254518 MsG0780036173.01.T01:intron 50.0%
!! GTGCAGATCAGAGTGTTGGA+CGG + Chr7:4253287-4253306 None:intergenic 50.0%
AAACGGGAGAGGAAGAAGGG+TGG - Chr7:4253065-4253084 MsG0780036173.01.T01:intron 55.0%
ACAGGAACGGGAGAGGAAGA+AGG - Chr7:4253200-4253219 MsG0780036173.01.T01:intron 55.0%
ACCCGTGAGTGAGAAATGGG+AGG + Chr7:4256976-4256995 None:intergenic 55.0%
ACGAAGGGACCGAGAGAAAC+AGG - Chr7:4253182-4253201 MsG0780036173.01.T01:intron 55.0%
AGAAGGGCGACGAGAGAGAA+CGG - Chr7:4253217-4253236 MsG0780036173.01.T01:intron 55.0%
AGAAGGGGGACGAGAGAAAC+GGG - Chr7:4253049-4253068 MsG0780036173.01.T01:CDS 55.0%
CAGGAACGGGAGAGGAAGAA+GGG - Chr7:4253201-4253220 MsG0780036173.01.T01:intron 55.0%
CCCGTGAGTGAGAAATGGGA+GGG + Chr7:4256975-4256994 None:intergenic 55.0%
CCCTCCCATTTCTCACTCAC+GGG - Chr7:4256972-4256991 MsG0780036173.01.T01:intron 55.0%
CCGCCCGGATTGAAATGACA+AGG - Chr7:4256734-4256753 MsG0780036173.01.T01:intron 55.0%
GAATGCAGCCCACCACTGAA+TGG + Chr7:4258348-4258367 None:intergenic 55.0%
GAGAGAAACAGGAACGGGAG+AGG - Chr7:4253193-4253212 MsG0780036173.01.T01:intron 55.0%
GAGAGAGAACGGAAGAGGAG+AGG - Chr7:4253228-4253247 MsG0780036173.01.T01:intron 55.0%
GAGGGCTGAAGGGATAGCAA+TGG - Chr7:4256805-4256824 MsG0780036173.01.T01:intron 55.0%
GGACCGAGAGAAACAGGAAC+GGG - Chr7:4253188-4253207 MsG0780036173.01.T01:intron 55.0%
GGGACCGAGAGAAACAGGAA+CGG - Chr7:4253187-4253206 MsG0780036173.01.T01:intron 55.0%
GTGAGTGAGAAATGGGAGGG+AGG + Chr7:4256972-4256991 None:intergenic 55.0%
TGAGAAATGGGAGGGAGGGA+GGG + Chr7:4256967-4256986 None:intergenic 55.0%
TGCCCCTCAGAAGGGCAAAA+AGG + Chr7:4252955-4252974 None:intergenic 55.0%
! GTGTTGGTCAGGCACAGAGA+AGG - Chr7:4257577-4257596 MsG0780036173.01.T01:intron 55.0%
!! GTCTCTTGGTGCCTTAGCGA+TGG - Chr7:4254494-4254513 MsG0780036173.01.T01:intron 55.0%
!!! TGCCCTTCTGAGGGGCATTT+TGG - Chr7:4252958-4252977 MsG0780036173.01.T01:CDS 55.0%
AAATGGGAGGGAGGGAGGGA+GGG + Chr7:4256963-4256982 None:intergenic 60.0%
GCGACGAGAGAGAACGGAAG+AGG - Chr7:4253223-4253242 MsG0780036173.01.T01:intron 60.0%
GTGAGAAATGGGAGGGAGGG+AGG + Chr7:4256968-4256987 None:intergenic 60.0%
!! GATCAGAGTGTTGGACGGCG+AGG + Chr7:4253282-4253301 None:intergenic 60.0%
AATGGGAGGGAGGGAGGGAG+GGG + Chr7:4256962-4256981 None:intergenic 65.0%
GAAATGGGAGGGAGGGAGGG+AGG + Chr7:4256964-4256983 None:intergenic 65.0%
GGGGACGAGAGAAACGGGAG+AGG - Chr7:4253054-4253073 MsG0780036173.01.T01:CDS 65.0%
GTGTTGGACGGCGAGGTCGA+CGG + Chr7:4253275-4253294 None:intergenic 65.0%
TTGGACGGCGAGGTCGACGG+TGG + Chr7:4253272-4253291 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 4252932 4259649 4252932 ID=MsG0780036173.01;Name=MsG0780036173.01
Chr7 mRNA 4252932 4259649 4252932 ID=MsG0780036173.01.T01;Parent=MsG0780036173.01;Name=MsG0780036173.01.T01;_AED=0.36;_eAED=0.68;_QI=87|0|0|1|1|1|7|0|203
Chr7 exon 4259594 4259649 4259594 ID=MsG0780036173.01.T01:exon:2411;Parent=MsG0780036173.01.T01
Chr7 exon 4258929 4258991 4258929 ID=MsG0780036173.01.T01:exon:2410;Parent=MsG0780036173.01.T01
Chr7 exon 4258338 4258425 4258338 ID=MsG0780036173.01.T01:exon:2409;Parent=MsG0780036173.01.T01
Chr7 exon 4258066 4258203 4258066 ID=MsG0780036173.01.T01:exon:2408;Parent=MsG0780036173.01.T01
Chr7 exon 4254367 4254450 4254367 ID=MsG0780036173.01.T01:exon:2407;Parent=MsG0780036173.01.T01
Chr7 exon 4253862 4253981 4253862 ID=MsG0780036173.01.T01:exon:2406;Parent=MsG0780036173.01.T01
Chr7 exon 4252932 4253081 4252932 ID=MsG0780036173.01.T01:exon:2405;Parent=MsG0780036173.01.T01
Chr7 five_prime_UTR 4259594 4259649 4259594 ID=MsG0780036173.01.T01:five_prime_utr;Parent=MsG0780036173.01.T01
Chr7 five_prime_UTR 4258961 4258991 4258961 ID=MsG0780036173.01.T01:five_prime_utr;Parent=MsG0780036173.01.T01
Chr7 CDS 4258929 4258960 4258929 ID=MsG0780036173.01.T01:cds;Parent=MsG0780036173.01.T01
Chr7 CDS 4258338 4258425 4258338 ID=MsG0780036173.01.T01:cds;Parent=MsG0780036173.01.T01
Chr7 CDS 4258066 4258203 4258066 ID=MsG0780036173.01.T01:cds;Parent=MsG0780036173.01.T01
Chr7 CDS 4254367 4254450 4254367 ID=MsG0780036173.01.T01:cds;Parent=MsG0780036173.01.T01
Chr7 CDS 4253862 4253981 4253862 ID=MsG0780036173.01.T01:cds;Parent=MsG0780036173.01.T01
Chr7 CDS 4252932 4253081 4252932 ID=MsG0780036173.01.T01:cds;Parent=MsG0780036173.01.T01
Gene Sequence

>MsG0780036173.01.T01

ATGGTTGAATTTGATCTGAATGGTGCTGGATGTGCATATGATAGAGCTGCAATTAAGTTCAGAGGAGTAGAGGCAGATATAAATTTCAACATTGAAGATTATGAAGAGGATTTGAAGCCGGTAGTTCGTCTATGTTTCTTAATCTCAGGTATCAACTCTTTCAAGTTTTTCATGGCATACAAAGGATTTTTTATGGTCAACGATGAGCTTCTTCTGCAAGTATTTAAGAAGCGCAAGTCTCTTGGTGCCTTAGCGATGACTCAACTGCGATATTTGCCTCTGTCGAAGATGCTTGATGCTGATATCACTGATAGTGTTATCGGGGAAGGATGTGTGATTAAGACAGAAGCTGATAAAAGTTTTTTGGCTGCTAAAGGCAGTGTTCCACTTGGTATTGGCAGAAACTCCCGTATCAAAAGAGCAATTGTTGACAAGAATGCTAGAATTGGAGAAAATGTGAAGGATGGTCGAGTAAGTTTTGAGGAATTTAAGGCAATGATGAAGACAAGAGGAGATTGGAAAATGGCATCTAGACAATATTTAAAAGCATTTCTAAATGCGTTAAGCTTCAGAATGTTTAAAGACAAATCTACGGGAGTAGCAACTAACTAA
Protein sequence

>MsG0780036173.01.T01

MVEFDLNGAGCAYDRAAIKFRGVEADINFNIEDYEEDLKPVVRLCFLISGINSFKFFMAYKGFFMVNDELLLQVFKKRKSLGALAMTQLRYLPLSKMLDADITDSVIGEGCVIKTEADKSFLAAKGSVPLGIGRNSRIKRAIVDKNARIGENVKDGRVSFEEFKAMMKTRGDWKMASRQYLKAFLNALSFRMFKDKSTGVATN*