Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036694.01.T01 | AES74809.1 | 88.964 | 589 | 33 | 4 | 7 | 566 | 55 | 640 | 0 | 1053 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036694.01.T01 | G7KLE6 | 88.964 | 589 | 33 | 4 | 7 | 566 | 55 | 640 | 0.0 | 1053 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0780036694.01 | MsG0780036695.01 | 0.897240 | 1.703938e-76 | 1.907213e-72 |
| MsG0780036694.01 | MsG0780036696.01 | 0.907011 | 8.025796e-81 | 1.395472e-76 |
| MsG0780036694.01 | MsG0780036700.01 | 0.969263 | 7.239966e-130 | 6.536425e-124 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036694.01.T01 | MTR_6g013380 | 88.964 | 589 | 33 | 4 | 7 | 566 | 55 | 640 | 0.0 | 1053 |
| MsG0780036694.01.T01 | MTR_6g013240 | 89.537 | 583 | 29 | 4 | 13 | 566 | 66 | 645 | 0.0 | 1048 |
| MsG0780036694.01.T01 | MTR_7g095350 | 60.684 | 585 | 192 | 7 | 11 | 563 | 6 | 584 | 0.0 | 681 |
| MsG0780036694.01.T01 | MTR_7g095350 | 60.825 | 582 | 190 | 7 | 14 | 563 | 1 | 576 | 0.0 | 677 |
| MsG0780036694.01.T01 | MTR_3g009910 | 56.086 | 608 | 204 | 12 | 14 | 565 | 3 | 603 | 0.0 | 638 |
| MsG0780036694.01.T01 | MTR_7g095560 | 53.947 | 608 | 218 | 10 | 14 | 566 | 3 | 603 | 0.0 | 611 |
| MsG0780036694.01.T01 | MTR_7g087840 | 52.773 | 595 | 233 | 11 | 14 | 566 | 1 | 589 | 0.0 | 551 |
| MsG0780036694.01.T01 | MTR_7g089610 | 56.389 | 493 | 168 | 11 | 13 | 470 | 36 | 516 | 1.16e-172 | 499 |
| MsG0780036694.01.T01 | MTR_7g095350 | 57.175 | 446 | 155 | 6 | 8 | 423 | 3 | 442 | 2.92e-164 | 475 |
| MsG0780036694.01.T01 | MTR_7g095350 | 57.500 | 440 | 151 | 6 | 14 | 423 | 1 | 434 | 2.77e-163 | 473 |
| MsG0780036694.01.T01 | MTR_7g092650 | 58.503 | 441 | 145 | 10 | 11 | 419 | 24 | 458 | 2.96e-163 | 473 |
| MsG0780036694.01.T01 | MTR_7g095350 | 57.968 | 433 | 146 | 6 | 14 | 416 | 1 | 427 | 3.51e-161 | 467 |
| MsG0780036694.01.T01 | MTR_3g009910 | 53.483 | 445 | 168 | 8 | 14 | 426 | 3 | 440 | 4.56e-154 | 449 |
| MsG0780036694.01.T01 | MTR_7g087040 | 53.512 | 484 | 186 | 9 | 14 | 464 | 1 | 478 | 6.18e-149 | 453 |
| MsG0780036694.01.T01 | MTR_7g087040 | 48.837 | 430 | 182 | 9 | 168 | 566 | 514 | 936 | 5.97e-111 | 354 |
| MsG0780036694.01.T01 | MTR_7g089620 | 54.688 | 448 | 160 | 10 | 12 | 424 | 12 | 451 | 1.67e-148 | 435 |
| MsG0780036694.01.T01 | MTR_7g089570 | 53.289 | 456 | 160 | 11 | 11 | 424 | 27 | 471 | 1.46e-142 | 421 |
| MsG0780036694.01.T01 | MTR_6g071510 | 45.675 | 578 | 232 | 14 | 14 | 555 | 1 | 532 | 2.38e-139 | 422 |
| MsG0780036694.01.T01 | MTR_7g105510 | 63.323 | 319 | 102 | 5 | 9 | 315 | 22 | 337 | 1.81e-131 | 387 |
| MsG0780036694.01.T01 | MTR_0176s0050 | 48.655 | 446 | 189 | 8 | 155 | 566 | 2 | 441 | 6.13e-124 | 372 |
| MsG0780036694.01.T01 | MTR_0176s0050 | 48.753 | 441 | 190 | 8 | 155 | 566 | 2 | 435 | 6.98e-123 | 369 |
| MsG0780036694.01.T01 | MTR_0176s0050 | 48.423 | 444 | 189 | 8 | 157 | 566 | 73 | 510 | 1.39e-120 | 365 |
| MsG0780036694.01.T01 | MTR_0176s0050 | 35.604 | 323 | 151 | 10 | 14 | 286 | 1 | 316 | 3.26e-33 | 133 |
| MsG0780036694.01.T01 | MTR_6g471290 | 47.651 | 447 | 183 | 10 | 12 | 431 | 18 | 440 | 6.69e-108 | 345 |
| MsG0780036694.01.T01 | MTR_6g471290 | 49.841 | 315 | 141 | 8 | 8 | 313 | 482 | 788 | 1.28e-74 | 256 |
| MsG0780036694.01.T01 | MTR_6g471290 | 50.579 | 259 | 104 | 5 | 331 | 566 | 708 | 965 | 3.18e-69 | 241 |
| MsG0780036694.01.T01 | MTR_2g032920 | 49.485 | 388 | 128 | 7 | 70 | 424 | 4 | 356 | 1.06e-104 | 319 |
| MsG0780036694.01.T01 | MTR_7g105980 | 55.363 | 289 | 94 | 8 | 277 | 534 | 65 | 349 | 1.91e-83 | 265 |
| MsG0780036694.01.T01 | MTR_7g105980 | 55.477 | 283 | 91 | 8 | 283 | 534 | 1 | 279 | 7.85e-82 | 258 |
| MsG0780036694.01.T01 | MTR_2g064400 | 36.852 | 540 | 233 | 14 | 18 | 537 | 13 | 464 | 7.92e-82 | 265 |
| MsG0780036694.01.T01 | MTR_7g095340 | 68.539 | 178 | 51 | 2 | 15 | 187 | 3 | 180 | 5.44e-74 | 239 |
| MsG0780036694.01.T01 | MTR_7g095390 | 62.130 | 169 | 58 | 2 | 15 | 177 | 3 | 171 | 1.65e-61 | 201 |
| MsG0780036694.01.T01 | MTR_7g095310 | 53.333 | 225 | 91 | 5 | 127 | 337 | 1 | 225 | 2.21e-57 | 192 |
| MsG0780036694.01.T01 | MTR_5g024120 | 39.931 | 288 | 97 | 7 | 14 | 298 | 1 | 215 | 5.03e-48 | 171 |
| MsG0780036694.01.T01 | MTR_5g024120 | 36.735 | 245 | 77 | 6 | 336 | 566 | 169 | 349 | 1.69e-36 | 139 |
| MsG0780036694.01.T01 | MTR_7g111110 | 70.213 | 94 | 25 | 1 | 14 | 107 | 1 | 91 | 4.41e-39 | 138 |
| MsG0780036694.01.T01 | MTR_6g471300 | 43.981 | 216 | 89 | 7 | 240 | 429 | 23 | 232 | 3.01e-36 | 135 |
| MsG0780036694.01.T01 | MTR_7g114090 | 35.135 | 296 | 171 | 7 | 22 | 298 | 6 | 299 | 2.29e-35 | 139 |
| MsG0780036694.01.T01 | MTR_1g115530 | 92.424 | 66 | 5 | 0 | 501 | 566 | 1 | 66 | 3.02e-35 | 127 |
| MsG0780036694.01.T01 | MTR_4g057860 | 62.376 | 101 | 33 | 1 | 454 | 549 | 1 | 101 | 2.97e-33 | 122 |
| MsG0780036694.01.T01 | MTR_7g092110 | 56.410 | 117 | 46 | 3 | 416 | 531 | 79 | 191 | 3.79e-32 | 122 |
| MsG0780036694.01.T01 | MTR_7g092110 | 68.085 | 47 | 14 | 1 | 14 | 60 | 25 | 70 | 1.41e-14 | 72.8 |
| MsG0780036694.01.T01 | MTR_7g116580 | 31.707 | 287 | 156 | 8 | 18 | 272 | 2 | 280 | 3.91e-32 | 130 |
| MsG0780036694.01.T01 | MTR_7g105520 | 59.000 | 100 | 41 | 0 | 374 | 473 | 2 | 101 | 1.26e-31 | 118 |
| MsG0780036694.01.T01 | MTR_7g116250 | 37.391 | 230 | 117 | 6 | 22 | 226 | 6 | 233 | 1.02e-29 | 118 |
| MsG0780036694.01.T01 | MTR_6g071680 | 54.082 | 98 | 41 | 1 | 473 | 566 | 3 | 100 | 5.58e-29 | 110 |
| MsG0780036694.01.T01 | MTR_7g092645 | 59.524 | 84 | 34 | 0 | 476 | 559 | 6 | 89 | 4.32e-26 | 103 |
| MsG0780036694.01.T01 | MTR_7g089617 | 49.194 | 124 | 45 | 3 | 461 | 566 | 41 | 164 | 8.35e-26 | 104 |
| MsG0780036694.01.T01 | MTR_7g095660 | 50.505 | 99 | 36 | 3 | 450 | 547 | 18 | 104 | 6.21e-21 | 89.7 |
| MsG0780036694.01.T01 | MTR_7g111100 | 60.870 | 69 | 27 | 0 | 464 | 532 | 90 | 158 | 1.44e-19 | 87.4 |
| MsG0780036694.01.T01 | MTR_5g090500 | 33.161 | 193 | 112 | 7 | 95 | 274 | 7 | 195 | 4.59e-18 | 84.0 |
| MsG0780036694.01.T01 | MTR_1g014450 | 29.545 | 220 | 135 | 7 | 22 | 237 | 19 | 222 | 1.08e-17 | 86.3 |
| MsG0780036694.01.T01 | MTR_5g040850 | 30.242 | 248 | 150 | 7 | 24 | 265 | 12 | 242 | 1.74e-17 | 85.5 |
| MsG0780036694.01.T01 | MTR_2g032940 | 76.596 | 47 | 9 | 1 | 14 | 58 | 1 | 47 | 6.07e-17 | 75.1 |
| MsG0780036694.01.T01 | MTR_1g021825 | 31.111 | 225 | 128 | 8 | 22 | 242 | 20 | 221 | 9.14e-17 | 83.2 |
| MsG0780036694.01.T01 | MTR_1g021820 | 29.148 | 223 | 126 | 7 | 22 | 237 | 31 | 228 | 1.01e-16 | 83.2 |
| MsG0780036694.01.T01 | MTR_1g013580 | 31.674 | 221 | 128 | 6 | 22 | 237 | 22 | 224 | 1.13e-16 | 83.2 |
| MsG0780036694.01.T01 | MTR_1g021825 | 31.111 | 225 | 128 | 8 | 22 | 242 | 91 | 292 | 1.50e-16 | 83.2 |
| MsG0780036694.01.T01 | MTR_2g047858 | 29.730 | 222 | 139 | 4 | 22 | 242 | 118 | 323 | 3.68e-16 | 82.0 |
| MsG0780036694.01.T01 | MTR_1g016310 | 27.982 | 218 | 140 | 4 | 22 | 237 | 23 | 225 | 4.59e-16 | 80.1 |
| MsG0780036694.01.T01 | MTR_1g013630 | 31.068 | 206 | 114 | 7 | 24 | 221 | 44 | 229 | 4.64e-16 | 80.5 |
| MsG0780036694.01.T01 | MTR_1g016310 | 27.982 | 218 | 140 | 4 | 22 | 237 | 23 | 225 | 1.02e-15 | 80.1 |
| MsG0780036694.01.T01 | MTR_1g011410 | 28.302 | 265 | 163 | 7 | 9 | 273 | 305 | 542 | 2.70e-15 | 79.3 |
| MsG0780036694.01.T01 | MTR_1g011410 | 27.711 | 249 | 130 | 9 | 22 | 270 | 10 | 208 | 7.27e-13 | 71.6 |
| MsG0780036694.01.T01 | MTR_1g013610 | 28.571 | 217 | 121 | 6 | 24 | 237 | 12 | 197 | 4.85e-15 | 77.4 |
| MsG0780036694.01.T01 | MTR_2g047848 | 28.629 | 248 | 154 | 8 | 24 | 265 | 12 | 242 | 9.32e-15 | 77.0 |
| MsG0780036694.01.T01 | MTR_2g047872 | 28.182 | 220 | 139 | 6 | 24 | 242 | 28 | 229 | 2.17e-14 | 75.9 |
| MsG0780036694.01.T01 | MTR_1g013840 | 31.343 | 201 | 109 | 8 | 22 | 213 | 59 | 239 | 2.43e-14 | 75.9 |
| MsG0780036694.01.T01 | MTR_1g016340 | 28.821 | 229 | 141 | 6 | 22 | 244 | 23 | 235 | 3.68e-14 | 75.1 |
| MsG0780036694.01.T01 | MTR_1g016340 | 28.821 | 229 | 141 | 6 | 22 | 244 | 18 | 230 | 3.84e-14 | 75.1 |
| MsG0780036694.01.T01 | MTR_1g011430 | 28.448 | 232 | 145 | 5 | 22 | 253 | 10 | 220 | 6.52e-14 | 73.9 |
| MsG0780036694.01.T01 | MTR_4g057725 | 28.319 | 226 | 143 | 7 | 22 | 244 | 25 | 234 | 1.87e-13 | 73.2 |
| MsG0780036694.01.T01 | MTR_1g011400 | 29.839 | 248 | 144 | 7 | 28 | 271 | 16 | 237 | 2.66e-13 | 72.4 |
| MsG0780036694.01.T01 | MTR_1g013560 | 25.070 | 359 | 163 | 17 | 22 | 353 | 22 | 301 | 1.18e-12 | 69.7 |
| MsG0780036694.01.T01 | MTR_2g091145 | 26.786 | 224 | 136 | 5 | 22 | 237 | 24 | 227 | 1.46e-12 | 70.1 |
| MsG0780036694.01.T01 | MTR_1g013560 | 25.070 | 359 | 163 | 17 | 22 | 353 | 22 | 301 | 2.42e-12 | 69.7 |
| MsG0780036694.01.T01 | MTR_1g028860 | 29.048 | 210 | 129 | 8 | 32 | 237 | 3 | 196 | 4.47e-12 | 67.4 |
| MsG0780036694.01.T01 | MTR_0049s0110 | 28.922 | 204 | 123 | 7 | 19 | 221 | 8 | 190 | 1.02e-11 | 66.2 |
| MsG0780036694.01.T01 | MTR_0049s0110 | 28.922 | 204 | 123 | 7 | 19 | 221 | 8 | 190 | 2.63e-11 | 65.5 |
| MsG0780036694.01.T01 | MTR_0049s0110 | 28.922 | 204 | 123 | 7 | 19 | 221 | 8 | 190 | 2.71e-11 | 65.5 |
| MsG0780036694.01.T01 | MTR_0049s0110 | 28.922 | 204 | 123 | 7 | 19 | 221 | 8 | 190 | 3.28e-11 | 65.9 |
| MsG0780036694.01.T01 | MTR_6g034190 | 25.170 | 294 | 173 | 13 | 13 | 271 | 11 | 292 | 5.09e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036694.01.T01 | AT1G13570 | 29.500 | 200 | 120 | 7 | 14 | 213 | 1 | 179 | 9.87e-12 | 66.6 |
| MsG0780036694.01.T01 | AT1G13570 | 29.500 | 200 | 120 | 7 | 14 | 213 | 1 | 179 | 2.48e-11 | 66.2 |
| MsG0780036694.01.T01 | AT1G13570 | 29.500 | 200 | 120 | 7 | 14 | 213 | 1 | 179 | 2.48e-11 | 66.2 |
| MsG0780036694.01.T01 | AT1G61330 | 26.736 | 288 | 170 | 11 | 14 | 293 | 9 | 263 | 3.25e-11 | 66.2 |
Find 95 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCACGAATGGGGTTTC+AGG | 0.179139 | 7:+12016251 | MsG0780036694.01.T01:CDS |
| ATCCTAATATGGACTACTTT+TGG | 0.238750 | 7:+12018643 | MsG0780036694.01.T01:CDS |
| ATCTCAATTTGCCACAATAT+TGG | 0.241079 | 7:+12016363 | MsG0780036694.01.T01:CDS |
| ACGACCGGTGAAGCTAAATT+TGG | 0.276490 | 7:-12016953 | None:intergenic |
| TATTATAGTCAAACATGTTT+TGG | 0.278761 | 7:-12016294 | None:intergenic |
| TAACTGTGGGATTAGCATTC+AGG | 0.282224 | 7:+12016828 | MsG0780036694.01.T01:CDS |
| CAAGTTAAGTATGAAAGATT+TGG | 0.297715 | 7:+12016201 | MsG0780036694.01.T01:CDS |
| CTTTAAGCACCTCATGAATA+AGG | 0.298664 | 7:-12019348 | None:intergenic |
| GATGGATGCAGTTGGAAAAT+AGG | 0.304259 | 7:-12016723 | None:intergenic |
| TGTGAATCAAGATATGTTTC+GGG | 0.314863 | 7:+12016699 | MsG0780036694.01.T01:CDS |
| ATGTGAATCAAGATATGTTT+CGG | 0.322952 | 7:+12016698 | MsG0780036694.01.T01:CDS |
| ATCCAAAAGTAGTCCATATT+AGG | 0.333779 | 7:-12018645 | None:intergenic |
| CAAATCTTTCATACTTAACT+TGG | 0.336894 | 7:-12016200 | None:intergenic |
| ATTTCAAAACCTTCAACAAT+TGG | 0.355615 | 7:+12018596 | MsG0780036694.01.T01:CDS |
| TCTTGTGACAAATTCTATAT+AGG | 0.371244 | 7:+12019277 | MsG0780036694.01.T01:CDS |
| TCCCTATGTTGGTCACCTAA+TGG | 0.373909 | 7:-12016442 | None:intergenic |
| GGGAGCATCTGATCCTAATA+TGG | 0.378377 | 7:+12018632 | MsG0780036694.01.T01:CDS |
| AGATATCCACATCATCTCTT+TGG | 0.386509 | 7:+12017335 | MsG0780036694.01.T01:CDS |
| TTCTCGACATGACGTGATCT+TGG | 0.398614 | 7:-12017365 | None:intergenic |
| CTCTCATCCTTTGAATATAG+TGG | 0.406219 | 7:+12017242 | MsG0780036694.01.T01:CDS |
| GGCACCCTTAGCAATTCCTT+TGG | 0.408075 | 7:-12016485 | None:intergenic |
| TACTGAAAGGATGAGAGATT+TGG | 0.413992 | 7:-12016877 | None:intergenic |
| GCAACAACAGTTATCTCATC+TGG | 0.418118 | 7:-12017212 | None:intergenic |
| GAATAGCAGTTCAATACGTT+TGG | 0.424083 | 7:-12016506 | None:intergenic |
| TTAATAACTCCAATTGTTGA+AGG | 0.427707 | 7:-12018605 | None:intergenic |
| ATATTGTGGCAAATTGAGAT+TGG | 0.429203 | 7:-12016360 | None:intergenic |
| GAAACAATGGCTTCACGAAT+GGG | 0.433081 | 7:+12016243 | MsG0780036694.01.T01:CDS |
| TCTATATAGGTGCCGAAAGA+TGG | 0.444813 | 7:+12019290 | MsG0780036694.01.T01:CDS |
| GAAAATTTACTCGGATAGAA+TGG | 0.454620 | 7:-12016420 | None:intergenic |
| TTCCATTAGGTGACCAACAT+AGG | 0.463838 | 7:+12016440 | MsG0780036694.01.T01:CDS |
| CAAATGAAACAATGTTGAAC+TGG | 0.468911 | 7:-12016797 | None:intergenic |
| TAAAGCTCCAAGGTTATTGA+AGG | 0.471745 | 7:+12017286 | MsG0780036694.01.T01:CDS |
| AGCGAACTTAACGAAGGTCT+TGG | 0.471991 | 7:+12018569 | MsG0780036694.01.T01:CDS |
| TTGTCCAAATTTAGCTTCAC+CGG | 0.475825 | 7:+12016949 | MsG0780036694.01.T01:CDS |
| GTAGCACCAATGGACTTCTC+TGG | 0.477151 | 7:+12016637 | MsG0780036694.01.T01:CDS |
| AGATGAAGTTACAGTTATCA+AGG | 0.480284 | 7:-12016759 | None:intergenic |
| AACACTACAAAGTTATAAGT+TGG | 0.486774 | 7:-12019390 | None:intergenic |
| CGAAACAATGGCTTCACGAA+TGG | 0.489107 | 7:+12016242 | MsG0780036694.01.T01:CDS |
| CTACTAGGAGGCATTTCTCT+AGG | 0.492470 | 7:-12016618 | None:intergenic |
| AGTTAGCCAGTCATCTATTG+AGG | 0.495680 | 7:+12019221 | MsG0780036694.01.T01:CDS |
| GTGTCAGATAAGAGAGCAAA+GGG | 0.497308 | 7:-12016574 | None:intergenic |
| TTTAATCCAGAAAATCCAAC+CGG | 0.499355 | 7:-12016997 | None:intergenic |
| AGAGCAAAGGGAAATTTGTA+TGG | 0.501584 | 7:-12016562 | None:intergenic |
| ATGTAAGATACAATACAATC+AGG | 0.507879 | 7:-12016172 | None:intergenic |
| AGAAGTCCATTGGTGCTACT+AGG | 0.508255 | 7:-12016633 | None:intergenic |
| ATTTGAACATTGTTAACTGT+GGG | 0.508598 | 7:+12016815 | MsG0780036694.01.T01:CDS |
| TCCATTAGGTGACCAACATA+GGG | 0.510943 | 7:+12016441 | MsG0780036694.01.T01:CDS |
| ATTGACAAATTGATTTCCAA+AGG | 0.513431 | 7:+12016469 | MsG0780036694.01.T01:CDS |
| TATGATCATGATGCCTTCAC+AGG | 0.517005 | 7:+12017394 | MsG0780036694.01.T01:CDS |
| TACTCGGATAGAATGGATCA+TGG | 0.521052 | 7:-12016413 | None:intergenic |
| CACATTCCTCAATAGATGAC+TGG | 0.525938 | 7:-12019227 | None:intergenic |
| CACCTAATGGAAAATTTACT+CGG | 0.528311 | 7:-12016429 | None:intergenic |
| TGTCAATGACATCCCTATGT+TGG | 0.535171 | 7:-12016453 | None:intergenic |
| GATTTCCAAAGGAATTGCTA+AGG | 0.537839 | 7:+12016480 | MsG0780036694.01.T01:CDS |
| TTGAATCCAGAGAAGTCCAT+TGG | 0.541899 | 7:-12016643 | None:intergenic |
| CATAGGCAAAGAAGAGAACA+TGG | 0.546734 | 7:+12019130 | MsG0780036694.01.T01:CDS |
| ATTTCCAAAGGAATTGCTAA+GGG | 0.551784 | 7:+12016481 | MsG0780036694.01.T01:CDS |
| GTCTACAAGATGGATGCAGT+TGG | 0.552883 | 7:-12016731 | None:intergenic |
| TTTGACTGACTCACCTGTGA+AGG | 0.553774 | 7:-12017407 | None:intergenic |
| ATTAGAAATTCACATGTGGA+TGG | 0.563552 | 7:+12019103 | MsG0780036694.01.T01:CDS |
| CATTTGAACATTGTTAACTG+TGG | 0.570732 | 7:+12016814 | MsG0780036694.01.T01:CDS |
| AAATGTGACAACAATTGTGT+TGG | 0.571151 | 7:+12017020 | MsG0780036694.01.T01:CDS |
| TGTGTCAGATAAGAGAGCAA+AGG | 0.573017 | 7:-12016575 | None:intergenic |
| GTGACAACAATTGTGTTGGA+TGG | 0.573798 | 7:+12017024 | MsG0780036694.01.T01:CDS |
| CACATGTGGATGGATCTCAT+AGG | 0.576807 | 7:+12019113 | MsG0780036694.01.T01:CDS |
| TGTGTAGCCACTATATTCAA+AGG | 0.577002 | 7:-12017249 | None:intergenic |
| ACAATTGGAGTTATTAATCG+AGG | 0.578365 | 7:+12018611 | MsG0780036694.01.T01:CDS |
| AACTTCATGTTAAAGCTCCA+AGG | 0.580258 | 7:+12017276 | MsG0780036694.01.T01:CDS |
| TAGAATGGATCATGGGACCT+TGG | 0.583139 | 7:-12016405 | None:intergenic |
| GGCTAACTCAATCACATCCA+TGG | 0.586528 | 7:-12019206 | None:intergenic |
| CAAGGGTGAAGTCTACAAGA+TGG | 0.587519 | 7:-12016741 | None:intergenic |
| TTGAATATAGTGGCTACACA+AGG | 0.587836 | 7:+12017252 | MsG0780036694.01.T01:CDS |
| TTGAAATATGTCGAGTTACG+TGG | 0.593759 | 7:+12019172 | MsG0780036694.01.T01:CDS |
| CGTGTGCAGCAGCAATGAAG+AGG | 0.594439 | 7:+12016125 | MsG0780036694.01.T01:CDS |
| CAATTGGAGTTATTAATCGA+GGG | 0.598215 | 7:+12018612 | MsG0780036694.01.T01:CDS |
| GTGGGATTAGCATTCAGGAT+AGG | 0.598512 | 7:+12016833 | MsG0780036694.01.T01:CDS |
| ATGCCTCCTAGTAGCACCAA+TGG | 0.599548 | 7:+12016627 | MsG0780036694.01.T01:CDS |
| TCTCAGAAAACTTTCTCTGA+CGG | 0.603077 | 7:+12018695 | MsG0780036694.01.T01:CDS |
| CATGAATTGATCCAATATTG+TGG | 0.603152 | 7:-12016374 | None:intergenic |
| ATCAATACAAGAATACTGAA+AGG | 0.604524 | 7:-12016890 | None:intergenic |
| CTAGCACATTGTCGAAACAA+TGG | 0.613854 | 7:+12016230 | MsG0780036694.01.T01:CDS |
| GATGAAGTTACAGTTATCAA+GGG | 0.618853 | 7:-12016758 | None:intergenic |
| ATTGCACCAAAGAGATGATG+TGG | 0.620114 | 7:-12017341 | None:intergenic |
| ACTCGGATAGAATGGATCAT+GGG | 0.621990 | 7:-12016412 | None:intergenic |
| AAACAATGGCTTCACGAATG+GGG | 0.623832 | 7:+12016244 | MsG0780036694.01.T01:CDS |
| TGATCGTAACCTTATTCATG+AGG | 0.624197 | 7:+12019339 | MsG0780036694.01.T01:CDS |
| TAACATTTAGAAAACAACTC+AGG | 0.631015 | 7:-12017078 | None:intergenic |
| AGTCCATTGGTGCTACTAGG+AGG | 0.635039 | 7:-12016630 | None:intergenic |
| TCAGATTAGAAATTCACATG+TGG | 0.645312 | 7:+12019099 | MsG0780036694.01.T01:intron |
| ACGTGGTTGTGTTTGCACCA+TGG | 0.649381 | 7:+12019189 | MsG0780036694.01.T01:CDS |
| CAATTCATGATGCATTACCA+AGG | 0.695900 | 7:+12016388 | MsG0780036694.01.T01:CDS |
| TGAATATAGTGGCTACACAA+GGG | 0.707131 | 7:+12017253 | MsG0780036694.01.T01:CDS |
| ACAGATAGCGAACTTAACGA+AGG | 0.711500 | 7:+12018563 | MsG0780036694.01.T01:intron |
| GTGAATCAAGATATGTTTCG+GGG | 0.727241 | 7:+12016700 | MsG0780036694.01.T01:CDS |
| TCATTGAAAATAATTGACTG+TGG | 0.761572 | 7:+12017173 | MsG0780036694.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | Chr7:12017832-12017851 | None:intergenic | 0.0% |
| !! | TAATTTACTTTAAATATTAC+TGG | + | Chr7:12018535-12018554 | MsG0780036694.01.T01:intron | 10.0% |
| !!! | TATTCAAACTTTTATTTTTT+AGG | + | Chr7:12018723-12018742 | MsG0780036694.01.T01:intron | 10.0% |
| !! | ACTAATATCCATAAAAAAAT+AGG | - | Chr7:12018774-12018793 | None:intergenic | 15.0% |
| !! | GGTTTCAAAAAAAAAATTAT+GGG | - | Chr7:12017901-12017920 | None:intergenic | 15.0% |
| !!! | ACTTTTTAGAATTTTTAAAC+CGG | + | Chr7:12016978-12016997 | MsG0780036694.01.T01:CDS | 15.0% |
| !!! | AGTTATAACCTATTTTTTTA+TGG | + | Chr7:12018763-12018782 | MsG0780036694.01.T01:intron | 15.0% |
| !!! | ATTATGGGTTTTTATAATTA+TGG | - | Chr7:12017886-12017905 | None:intergenic | 15.0% |
| !!! | TTGGATTTTAGATATTATAA+TGG | + | Chr7:12018662-12018681 | MsG0780036694.01.T01:CDS | 15.0% |
| !!! | TTTTTTTTTCCTTCAAATTT+GGG | + | Chr7:12018167-12018186 | MsG0780036694.01.T01:intron | 15.0% |
| !!! | TTTTTTTTTTCCTTCAAATT+TGG | + | Chr7:12018166-12018185 | MsG0780036694.01.T01:intron | 15.0% |
| !! | AAAAAATAAGAAAAAGCTTG+TGG | - | Chr7:12018455-12018474 | None:intergenic | 20.0% |
| !! | AAACAATAAACATCATAAGT+AGG | - | Chr7:12017434-12017453 | None:intergenic | 20.0% |
| !! | CATTTAAACATATGTATGTT+TGG | - | Chr7:12017798-12017817 | None:intergenic | 20.0% |
| !! | GGGTTTCAAAAAAAAAATTA+TGG | - | Chr7:12017902-12017921 | None:intergenic | 20.0% |
| !!! | AAGAAGTTGATATAAATTTG+TGG | - | Chr7:12017923-12017942 | None:intergenic | 20.0% |
| !!! | AGAAGTTGATATAAATTTGT+GGG | - | Chr7:12017922-12017941 | None:intergenic | 20.0% |
| !!! | ATATGAGCCATAATTTTTAT+TGG | - | Chr7:12016928-12016947 | None:intergenic | 20.0% |
| !!! | GAATGAAACTGATTTTATTT+TGG | + | Chr7:12016531-12016550 | MsG0780036694.01.T01:CDS | 20.0% |
| !!! | TATGAGCCATAATTTTTATT+GGG | - | Chr7:12016927-12016946 | None:intergenic | 20.0% |
| !!! | TATTATAGTCAAACATGTTT+TGG | - | Chr7:12016297-12016316 | None:intergenic | 20.0% |
| !!! | TTCTTATTTTTTTCTGCTAT+TGG | + | Chr7:12018463-12018482 | MsG0780036694.01.T01:intron | 20.0% |
| !!! | TTTTTGGAATAATATTCTTC+TGG | + | Chr7:12018008-12018027 | MsG0780036694.01.T01:intron | 20.0% |
| ! | AAAAAATTTGCATCTGGATT+GGG | - | Chr7:12017993-12018012 | None:intergenic | 25.0% |
| ! | AGAACACCCAATAAAAATTA+TGG | + | Chr7:12016918-12016937 | MsG0780036694.01.T01:CDS | 25.0% |
| ! | ATACCAACTCTTAAAAATCA+TGG | - | Chr7:12019017-12019036 | None:intergenic | 25.0% |
| ! | ATCAATACAAGAATACTGAA+AGG | - | Chr7:12016893-12016912 | None:intergenic | 25.0% |
| ! | ATGTAAGATACAATACAATC+AGG | - | Chr7:12016175-12016194 | None:intergenic | 25.0% |
| ! | ATGTGAATCAAGATATGTTT+CGG | + | Chr7:12016698-12016717 | MsG0780036694.01.T01:CDS | 25.0% |
| ! | ATTTCAAAACCTTCAACAAT+TGG | + | Chr7:12018596-12018615 | MsG0780036694.01.T01:CDS | 25.0% |
| ! | ATTTGAACATTGTTAACTGT+GGG | + | Chr7:12016815-12016834 | MsG0780036694.01.T01:CDS | 25.0% |
| ! | CAAATCTTTCATACTTAACT+TGG | - | Chr7:12016203-12016222 | None:intergenic | 25.0% |
| ! | CAAGTTAAGTATGAAAGATT+TGG | + | Chr7:12016201-12016220 | MsG0780036694.01.T01:CDS | 25.0% |
| ! | CACATTGTGAACATTAAATA+AGG | - | Chr7:12018845-12018864 | None:intergenic | 25.0% |
| ! | CGATTAATTAAAAGAAACCA+AGG | - | Chr7:12018492-12018511 | None:intergenic | 25.0% |
| ! | TAACATTTAGAAAACAACTC+AGG | - | Chr7:12017081-12017100 | None:intergenic | 25.0% |
| ! | TATTCCAAAAAATTTGCATC+TGG | - | Chr7:12017999-12018018 | None:intergenic | 25.0% |
| ! | TCATTGAAAATAATTGACTG+TGG | + | Chr7:12017173-12017192 | MsG0780036694.01.T01:CDS | 25.0% |
| ! | TCTTGTGACAAATTCTATAT+AGG | + | Chr7:12019277-12019296 | MsG0780036694.01.T01:CDS | 25.0% |
| ! | TTAATAACTCCAATTGTTGA+AGG | - | Chr7:12018608-12018627 | None:intergenic | 25.0% |
| !! | AATTCTAAAAAGTTTACGAC+CGG | - | Chr7:12016971-12016990 | None:intergenic | 25.0% |
| !! | ATCATAGCAACAATATTTTG+AGG | - | Chr7:12019323-12019342 | None:intergenic | 25.0% |
| !! | ATGGGTTTTTATAATTATGG+AGG | - | Chr7:12017883-12017902 | None:intergenic | 25.0% |
| !! | ATTGACAAATTGATTTCCAA+AGG | + | Chr7:12016469-12016488 | MsG0780036694.01.T01:CDS | 25.0% |
| !! | CATATGTTTAAATGCTCTTT+TGG | + | Chr7:12017804-12017823 | MsG0780036694.01.T01:intron | 25.0% |
| !!! | TTGTCATAAGTTGTTTTCAT+AGG | - | Chr7:12017625-12017644 | None:intergenic | 25.0% |
| !!! | TTTAGAATTTTTAAACCGGT+TGG | + | Chr7:12016982-12017001 | MsG0780036694.01.T01:CDS | 25.0% |
| AAAAATTTGCATCTGGATTG+GGG | - | Chr7:12017992-12018011 | None:intergenic | 30.0% | |
| AAATGTGACAACAATTGTGT+TGG | + | Chr7:12017020-12017039 | MsG0780036694.01.T01:CDS | 30.0% | |
| AACATGCCTATATATTCGAA+TGG | - | Chr7:12017543-12017562 | None:intergenic | 30.0% | |
| AACTCTTAAAAATCATGGCT+GGG | - | Chr7:12019012-12019031 | None:intergenic | 30.0% | |
| AATGATTCTGCAATTCTTGA+AGG | - | Chr7:12017121-12017140 | None:intergenic | 30.0% | |
| ACAATTGGAGTTATTAATCG+AGG | + | Chr7:12018611-12018630 | MsG0780036694.01.T01:CDS | 30.0% | |
| AGATGAAGTTACAGTTATCA+AGG | - | Chr7:12016762-12016781 | None:intergenic | 30.0% | |
| ATATATAGGCATGTTTGGAT+TGG | + | Chr7:12017548-12017567 | MsG0780036694.01.T01:intron | 30.0% | |
| ATATTGTGGCAAATTGAGAT+TGG | - | Chr7:12016363-12016382 | None:intergenic | 30.0% | |
| ATCCAAAAGTAGTCCATATT+AGG | - | Chr7:12018648-12018667 | None:intergenic | 30.0% | |
| ATCTCAATTTGCCACAATAT+TGG | + | Chr7:12016363-12016382 | MsG0780036694.01.T01:CDS | 30.0% | |
| ATTAGAAATTCACATGTGGA+TGG | + | Chr7:12019103-12019122 | MsG0780036694.01.T01:CDS | 30.0% | |
| ATTTCCAAAGGAATTGCTAA+GGG | + | Chr7:12016481-12016500 | MsG0780036694.01.T01:CDS | 30.0% | |
| CAAAAAACCTTCAATAACCT+TGG | - | Chr7:12017296-12017315 | None:intergenic | 30.0% | |
| CAAAAAATTTGCATCTGGAT+TGG | - | Chr7:12017994-12018013 | None:intergenic | 30.0% | |
| CAAATGAAACAATGTTGAAC+TGG | - | Chr7:12016800-12016819 | None:intergenic | 30.0% | |
| CAATTGGAGTTATTAATCGA+GGG | + | Chr7:12018612-12018631 | MsG0780036694.01.T01:CDS | 30.0% | |
| CACCTAATGGAAAATTTACT+CGG | - | Chr7:12016432-12016451 | None:intergenic | 30.0% | |
| CATGAATTGATCCAATATTG+TGG | - | Chr7:12016377-12016396 | None:intergenic | 30.0% | |
| CATTTGAACATTGTTAACTG+TGG | + | Chr7:12016814-12016833 | MsG0780036694.01.T01:CDS | 30.0% | |
| CTGAACATGTGTTTATAAGT+CGG | + | Chr7:12018942-12018961 | MsG0780036694.01.T01:intron | 30.0% | |
| GAAAATTTACTCGGATAGAA+TGG | - | Chr7:12016423-12016442 | None:intergenic | 30.0% | |
| GATGAAGTTACAGTTATCAA+GGG | - | Chr7:12016761-12016780 | None:intergenic | 30.0% | |
| TCAGATTAGAAATTCACATG+TGG | + | Chr7:12019099-12019118 | MsG0780036694.01.T01:intron | 30.0% | |
| TGAACATGTGTTTATAAGTC+GGG | + | Chr7:12018943-12018962 | MsG0780036694.01.T01:intron | 30.0% | |
| TGTGAATCAAGATATGTTTC+GGG | + | Chr7:12016699-12016718 | MsG0780036694.01.T01:CDS | 30.0% | |
| TTCGAATATATAGGCATGTT+TGG | + | Chr7:12017543-12017562 | MsG0780036694.01.T01:intron | 30.0% | |
| TTCTAAATGTTACCAACTTG+AGG | + | Chr7:12017089-12017108 | MsG0780036694.01.T01:intron | 30.0% | |
| TTTAATCCAGAAAATCCAAC+CGG | - | Chr7:12017000-12017019 | None:intergenic | 30.0% | |
| ! | ATCCGAGTAAATTTTCCATT+AGG | + | Chr7:12016427-12016446 | MsG0780036694.01.T01:CDS | 30.0% |
| ! | GAATAATATTCTTCTGGTTG+TGG | + | Chr7:12018014-12018033 | MsG0780036694.01.T01:intron | 30.0% |
| ! | GCTTATTTGAGTTTATCTAC+TGG | + | Chr7:12017570-12017589 | MsG0780036694.01.T01:intron | 30.0% |
| ! | TACTTTAAAGAGTTCCACTT+CGG | + | Chr7:12018907-12018926 | MsG0780036694.01.T01:intron | 30.0% |
| !! | ATCCTAATATGGACTACTTT+TGG | + | Chr7:12018643-12018662 | MsG0780036694.01.T01:CDS | 30.0% |
| !!! | ATATACCACTATGTCGATTT+TGG | - | Chr7:12017502-12017521 | None:intergenic | 30.0% |
| !!! | CAAGGTTATTGAAGGTTTTT+TGG | + | Chr7:12017294-12017313 | MsG0780036694.01.T01:CDS | 30.0% |
| !!! | CAATCCAGATGCAAATTTTT+TGG | + | Chr7:12017992-12018011 | MsG0780036694.01.T01:intron | 30.0% |
| !!! | TATACCACTATGTCGATTTT+GGG | - | Chr7:12017501-12017520 | None:intergenic | 30.0% |
| !!! | TGAAAGAGTCGAAAGTTTTT+TGG | - | Chr7:12016334-12016353 | None:intergenic | 30.0% |
| AACATGTGTTTATAAGTCGG+GGG | + | Chr7:12018945-12018964 | MsG0780036694.01.T01:intron | 35.0% | |
| AACTTCATGTTAAAGCTCCA+AGG | + | Chr7:12017276-12017295 | MsG0780036694.01.T01:CDS | 35.0% | |
| AGAGCAAAGGGAAATTTGTA+TGG | - | Chr7:12016565-12016584 | None:intergenic | 35.0% | |
| AGATATCCACATCATCTCTT+TGG | + | Chr7:12017335-12017354 | MsG0780036694.01.T01:CDS | 35.0% | |
| ATGTTGTCAACCTTTGATAG+TGG | + | Chr7:12017460-12017479 | MsG0780036694.01.T01:intron | 35.0% | |
| ATTGCAAGACCCAAATTTGA+AGG | - | Chr7:12018179-12018198 | None:intergenic | 35.0% | |
| CAACTCTTAAAAATCATGGC+TGG | - | Chr7:12019013-12019032 | None:intergenic | 35.0% | |
| CAATTCATGATGCATTACCA+AGG | + | Chr7:12016388-12016407 | MsG0780036694.01.T01:CDS | 35.0% | |
| CATAGTGGTATATTGCATTG+TGG | + | Chr7:12017509-12017528 | MsG0780036694.01.T01:intron | 35.0% | |
| CGACTTATAAACACATGTTC+AGG | - | Chr7:12018944-12018963 | None:intergenic | 35.0% | |
| CTCTCATCCTTTGAATATAG+TGG | + | Chr7:12017242-12017261 | MsG0780036694.01.T01:CDS | 35.0% | |
| CTGCTTCCATTCGAATATAT+AGG | + | Chr7:12017534-12017553 | MsG0780036694.01.T01:intron | 35.0% | |
| CTTTAAGCACCTCATGAATA+AGG | - | Chr7:12019351-12019370 | None:intergenic | 35.0% | |
| GAACATGTGTTTATAAGTCG+GGG | + | Chr7:12018944-12018963 | MsG0780036694.01.T01:intron | 35.0% | |
| GAATAGCAGTTCAATACGTT+TGG | - | Chr7:12016509-12016528 | None:intergenic | 35.0% | |
| GATTTCCAAAGGAATTGCTA+AGG | + | Chr7:12016480-12016499 | MsG0780036694.01.T01:CDS | 35.0% | |
| GCAATGAAACAGTAATGTGA+AGG | - | Chr7:12018205-12018224 | None:intergenic | 35.0% | |
| GTGAATCAAGATATGTTTCG+GGG | + | Chr7:12016700-12016719 | MsG0780036694.01.T01:CDS | 35.0% | |
| TAAAGCTCCAAGGTTATTGA+AGG | + | Chr7:12017286-12017305 | MsG0780036694.01.T01:CDS | 35.0% | |
| TACTGAAAGGATGAGAGATT+TGG | - | Chr7:12016880-12016899 | None:intergenic | 35.0% | |
| TCTCAGAAAACTTTCTCTGA+CGG | + | Chr7:12018695-12018714 | MsG0780036694.01.T01:CDS | 35.0% | |
| TGAAATTCTCAATCCCAACA+TGG | + | Chr7:12018255-12018274 | MsG0780036694.01.T01:intron | 35.0% | |
| TGAATATAGTGGCTACACAA+GGG | + | Chr7:12017253-12017272 | MsG0780036694.01.T01:CDS | 35.0% | |
| TGATCGTAACCTTATTCATG+AGG | + | Chr7:12019339-12019358 | MsG0780036694.01.T01:CDS | 35.0% | |
| TGTGTAGCCACTATATTCAA+AGG | - | Chr7:12017252-12017271 | None:intergenic | 35.0% | |
| TTGAAATATGTCGAGTTACG+TGG | + | Chr7:12019172-12019191 | MsG0780036694.01.T01:CDS | 35.0% | |
| TTGAATATAGTGGCTACACA+AGG | + | Chr7:12017252-12017271 | MsG0780036694.01.T01:CDS | 35.0% | |
| ! | AAAATTTGCATCTGGATTGG+GGG | - | Chr7:12017991-12018010 | None:intergenic | 35.0% |
| ! | ATTTTCAATGACGCAGCTTT+CGG | - | Chr7:12017164-12017183 | None:intergenic | 35.0% |
| ! | TTGTCCAAATTTAGCTTCAC+CGG | + | Chr7:12016949-12016968 | MsG0780036694.01.T01:CDS | 35.0% |
| ! | TTTAAACCGGTTGGATTTTC+TGG | + | Chr7:12016991-12017010 | MsG0780036694.01.T01:CDS | 35.0% |
| !! | AAGAGTTGGTATATGTCTGA+TGG | + | Chr7:12019025-12019044 | MsG0780036694.01.T01:intron | 35.0% |
| !! | CAGCCATGATTTTTAAGAGT+TGG | + | Chr7:12019011-12019030 | MsG0780036694.01.T01:intron | 35.0% |
| !! | TGAGGTTTTAGTCCATCTTT+CGG | - | Chr7:12019305-12019324 | None:intergenic | 35.0% |
| !!! | GGTTTTTTGGAATGCAACTA+AGG | + | Chr7:12017307-12017326 | MsG0780036694.01.T01:CDS | 35.0% |
| !!! | TGCAACAAAGTGATGGATTT+TGG | + | Chr7:12018225-12018244 | MsG0780036694.01.T01:intron | 35.0% |
| !!! | TGTTTTGGAGATCAAAGTTG+AGG | - | Chr7:12016282-12016301 | None:intergenic | 35.0% |
| AAACAATGGCTTCACGAATG+GGG | + | Chr7:12016244-12016263 | MsG0780036694.01.T01:CDS | 40.0% | |
| AAACGCCTAACAAACACAGA+GGG | + | Chr7:12018094-12018113 | MsG0780036694.01.T01:intron | 40.0% | |
| ACAGATAGCGAACTTAACGA+AGG | + | Chr7:12018563-12018582 | MsG0780036694.01.T01:intron | 40.0% | |
| ACTCGGATAGAATGGATCAT+GGG | - | Chr7:12016415-12016434 | None:intergenic | 40.0% | |
| AGTTAGCCAGTCATCTATTG+AGG | + | Chr7:12019221-12019240 | MsG0780036694.01.T01:CDS | 40.0% | |
| ATTGCACCAAAGAGATGATG+TGG | - | Chr7:12017344-12017363 | None:intergenic | 40.0% | |
| CACATTCCTCAATAGATGAC+TGG | - | Chr7:12019230-12019249 | None:intergenic | 40.0% | |
| CATAGGCAAAGAAGAGAACA+TGG | + | Chr7:12019130-12019149 | MsG0780036694.01.T01:CDS | 40.0% | |
| CTAGCACATTGTCGAAACAA+TGG | + | Chr7:12016230-12016249 | MsG0780036694.01.T01:CDS | 40.0% | |
| GAAACAATGGCTTCACGAAT+GGG | + | Chr7:12016243-12016262 | MsG0780036694.01.T01:CDS | 40.0% | |
| GATGGATGCAGTTGGAAAAT+AGG | - | Chr7:12016726-12016745 | None:intergenic | 40.0% | |
| GCAACAACAGTTATCTCATC+TGG | - | Chr7:12017215-12017234 | None:intergenic | 40.0% | |
| GTGACAACAATTGTGTTGGA+TGG | + | Chr7:12017024-12017043 | MsG0780036694.01.T01:CDS | 40.0% | |
| GTGTCAGATAAGAGAGCAAA+GGG | - | Chr7:12016577-12016596 | None:intergenic | 40.0% | |
| TACTCGGATAGAATGGATCA+TGG | - | Chr7:12016416-12016435 | None:intergenic | 40.0% | |
| TATGATCATGATGCCTTCAC+AGG | + | Chr7:12017394-12017413 | MsG0780036694.01.T01:CDS | 40.0% | |
| TCATTGCTGCAACAAAGTGA+TGG | + | Chr7:12018218-12018237 | MsG0780036694.01.T01:intron | 40.0% | |
| TCCATTAGGTGACCAACATA+GGG | + | Chr7:12016441-12016460 | MsG0780036694.01.T01:CDS | 40.0% | |
| TCTTTCCCTCTGTGTTTGTT+AGG | - | Chr7:12018102-12018121 | None:intergenic | 40.0% | |
| TGTCAATGACATCCCTATGT+TGG | - | Chr7:12016456-12016475 | None:intergenic | 40.0% | |
| TGTGTCAGATAAGAGAGCAA+AGG | - | Chr7:12016578-12016597 | None:intergenic | 40.0% | |
| TGTTAGGCGTTTGTAGGTAA+TGG | - | Chr7:12018086-12018105 | None:intergenic | 40.0% | |
| TTCCATTAGGTGACCAACAT+AGG | + | Chr7:12016440-12016459 | MsG0780036694.01.T01:CDS | 40.0% | |
| TTGAATCCAGAGAAGTCCAT+TGG | - | Chr7:12016646-12016665 | None:intergenic | 40.0% | |
| TTGTCCCAAAATCGACATAG+TGG | + | Chr7:12017494-12017513 | MsG0780036694.01.T01:intron | 40.0% | |
| ! | AGAATCGGAAGTCTAGAGTT+GGG | + | Chr7:12018123-12018142 | MsG0780036694.01.T01:intron | 40.0% |
| ! | TAACTGTGGGATTAGCATTC+AGG | + | Chr7:12016828-12016847 | MsG0780036694.01.T01:CDS | 40.0% |
| ! | TGTGTTTGTTAGGCGTTTGT+AGG | - | Chr7:12018092-12018111 | None:intergenic | 40.0% |
| !! | TCTATATAGGTGCCGAAAGA+TGG | + | Chr7:12019290-12019309 | MsG0780036694.01.T01:CDS | 40.0% |
| !! | TTTTCTGCTATTGGTTGCCT+TGG | + | Chr7:12018472-12018491 | MsG0780036694.01.T01:intron | 40.0% |
| AACATGGCAATACAACCGAG+TGG | + | Chr7:12018271-12018290 | MsG0780036694.01.T01:intron | 45.0% | |
| ACGACCGGTGAAGCTAAATT+TGG | - | Chr7:12016956-12016975 | None:intergenic | 45.0% | |
| ACTCGGTTGTATTGCCATGT+TGG | - | Chr7:12018272-12018291 | None:intergenic | 45.0% | |
| AGCGAACTTAACGAAGGTCT+TGG | + | Chr7:12018569-12018588 | MsG0780036694.01.T01:CDS | 45.0% | |
| AGGTCATCGTTTATCCGAAG+TGG | - | Chr7:12018924-12018943 | None:intergenic | 45.0% | |
| ATGTTACGCGCCACTATCAA+AGG | - | Chr7:12017473-12017492 | None:intergenic | 45.0% | |
| CAAACGCCTAACAAACACAG+AGG | + | Chr7:12018093-12018112 | MsG0780036694.01.T01:intron | 45.0% | |
| CAAGGGTGAAGTCTACAAGA+TGG | - | Chr7:12016744-12016763 | None:intergenic | 45.0% | |
| CACAGAGGGAAAGAGAGAAT+CGG | + | Chr7:12018108-12018127 | MsG0780036694.01.T01:intron | 45.0% | |
| CACATGTGGATGGATCTCAT+AGG | + | Chr7:12019113-12019132 | MsG0780036694.01.T01:CDS | 45.0% | |
| CGAAACAATGGCTTCACGAA+TGG | + | Chr7:12016242-12016261 | MsG0780036694.01.T01:CDS | 45.0% | |
| CTAACAGAACCCCACAAAAC+TGG | - | Chr7:12018988-12019007 | None:intergenic | 45.0% | |
| CTCGGTTGTATTGCCATGTT+GGG | - | Chr7:12018271-12018290 | None:intergenic | 45.0% | |
| GGCTAACTCAATCACATCCA+TGG | - | Chr7:12019209-12019228 | None:intergenic | 45.0% | |
| GTCTACAAGATGGATGCAGT+TGG | - | Chr7:12016734-12016753 | None:intergenic | 45.0% | |
| TAGAATGGATCATGGGACCT+TGG | - | Chr7:12016408-12016427 | None:intergenic | 45.0% | |
| TCCCTATGTTGGTCACCTAA+TGG | - | Chr7:12016445-12016464 | None:intergenic | 45.0% | |
| TTCTCGACATGACGTGATCT+TGG | - | Chr7:12017368-12017387 | None:intergenic | 45.0% | |
| ! | AATGTCTGGGGTGATGATAC+TGG | + | Chr7:12018295-12018314 | MsG0780036694.01.T01:intron | 45.0% |
| ! | ATGTCTGGGGTGATGATACT+GGG | + | Chr7:12018296-12018315 | MsG0780036694.01.T01:intron | 45.0% |
| ! | GAGAATCGGAAGTCTAGAGT+TGG | + | Chr7:12018122-12018141 | MsG0780036694.01.T01:intron | 45.0% |
| ! | GTGGGATTAGCATTCAGGAT+AGG | + | Chr7:12016833-12016852 | MsG0780036694.01.T01:CDS | 45.0% |
| ! | TTTGACTGACTCACCTGTGA+AGG | - | Chr7:12017410-12017429 | None:intergenic | 45.0% |
| !! | ACCGCACAATCCAGTTTTGT+GGG | + | Chr7:12018975-12018994 | MsG0780036694.01.T01:intron | 45.0% |
| !! | AGAAGTCCATTGGTGCTACT+AGG | - | Chr7:12016636-12016655 | None:intergenic | 45.0% |
| !! | CAGTTTTGTGGGGTTCTGTT+AGG | + | Chr7:12018986-12019005 | MsG0780036694.01.T01:intron | 45.0% |
| !! | CTACTAGGAGGCATTTCTCT+AGG | - | Chr7:12016621-12016640 | None:intergenic | 45.0% |
| !! | GGGAGCATCTGATCCTAATA+TGG | + | Chr7:12018632-12018651 | MsG0780036694.01.T01:CDS | 45.0% |
| ACAACCGAGTGGCAATGTCT+GGG | + | Chr7:12018282-12018301 | MsG0780036694.01.T01:intron | 50.0% | |
| ACGTGGTTGTGTTTGCACCA+TGG | + | Chr7:12019189-12019208 | MsG0780036694.01.T01:CDS | 50.0% | |
| ATGCCTCCTAGTAGCACCAA+TGG | + | Chr7:12016627-12016646 | MsG0780036694.01.T01:CDS | 50.0% | |
| CCCCACAAAACTGGATTGTG+CGG | - | Chr7:12018979-12018998 | None:intergenic | 50.0% | |
| GGCACCCTTAGCAATTCCTT+TGG | - | Chr7:12016488-12016507 | None:intergenic | 50.0% | |
| TACAACCGAGTGGCAATGTC+TGG | + | Chr7:12018281-12018300 | MsG0780036694.01.T01:intron | 50.0% | |
| TGAAGGTGACGTCCTCAAGT+TGG | - | Chr7:12017104-12017123 | None:intergenic | 50.0% | |
| ! | CACCGCACAATCCAGTTTTG+TGG | + | Chr7:12018974-12018993 | MsG0780036694.01.T01:intron | 50.0% |
| ! | GTAGCACCAATGGACTTCTC+TGG | + | Chr7:12016637-12016656 | MsG0780036694.01.T01:CDS | 50.0% |
| ! | TGCATCTGGATTGGGGGTTA+AGG | - | Chr7:12017985-12018004 | None:intergenic | 50.0% |
| !! | AGTCCATTGGTGCTACTAGG+AGG | - | Chr7:12016633-12016652 | None:intergenic | 50.0% |
| !! | CCGCACAATCCAGTTTTGTG+GGG | + | Chr7:12018976-12018995 | MsG0780036694.01.T01:intron | 50.0% |
| CAACCGAGTGGCAATGTCTG+GGG | + | Chr7:12018283-12018302 | MsG0780036694.01.T01:intron | 55.0% | |
| CGTGTGCAGCAGCAATGAAG+AGG | + | Chr7:12016125-12016144 | MsG0780036694.01.T01:CDS | 55.0% | |
| GGCTTCACGAATGGGGTTTC+AGG | + | Chr7:12016251-12016270 | MsG0780036694.01.T01:CDS | 55.0% | |
| TCACCCCAGACATTGCCACT+CGG | - | Chr7:12018289-12018308 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 12016100 | 12019408 | 12016100 | ID=MsG0780036694.01;Name=MsG0780036694.01 |
| Chr7 | mRNA | 12016100 | 12019408 | 12016100 | ID=MsG0780036694.01.T01;Parent=MsG0780036694.01;Name=MsG0780036694.01.T01;_AED=0.48;_eAED=0.49;_QI=0|0.75|0.6|1|0.75|0.6|5|0|566 |
| Chr7 | exon | 12016100 | 12017096 | 12016100 | ID=MsG0780036694.01.T01:exon:10698;Parent=MsG0780036694.01.T01 |
| Chr7 | exon | 12017168 | 12017415 | 12017168 | ID=MsG0780036694.01.T01:exon:10699;Parent=MsG0780036694.01.T01 |
| Chr7 | exon | 12018567 | 12018716 | 12018567 | ID=MsG0780036694.01.T01:exon:10700;Parent=MsG0780036694.01.T01 |
| Chr7 | exon | 12019103 | 12019408 | 12019103 | ID=MsG0780036694.01.T01:exon:10701;Parent=MsG0780036694.01.T01 |
| Chr7 | CDS | 12016100 | 12017096 | 12016100 | ID=MsG0780036694.01.T01:cds;Parent=MsG0780036694.01.T01 |
| Chr7 | CDS | 12017168 | 12017415 | 12017168 | ID=MsG0780036694.01.T01:cds;Parent=MsG0780036694.01.T01 |
| Chr7 | CDS | 12018567 | 12018716 | 12018567 | ID=MsG0780036694.01.T01:cds;Parent=MsG0780036694.01.T01 |
| Chr7 | CDS | 12019103 | 12019408 | 12019103 | ID=MsG0780036694.01.T01:cds;Parent=MsG0780036694.01.T01 |
| Gene Sequence |
| Protein sequence |
