AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036696.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036696.01.T01 MTR_6g013380 94.371 302 17 0 360 661 339 640 0.0 595
MsG0780036696.01.T01 MTR_6g013380 77.259 321 55 4 53 358 323 640 3.23e-164 486
MsG0780036696.01.T01 MTR_6g013380 75.862 174 25 2 1 157 145 318 9.96e-77 258
MsG0780036696.01.T01 MTR_6g013380 41.111 90 51 1 371 460 231 318 2.91e-11 67.0
MsG0780036696.01.T01 MTR_6g013240 94.371 302 17 0 360 661 344 645 0.0 593
MsG0780036696.01.T01 MTR_6g013240 77.259 321 55 4 53 358 328 645 1.08e-163 484
MsG0780036696.01.T01 MTR_6g013240 75.862 174 25 2 1 157 150 323 1.71e-76 257
MsG0780036696.01.T01 MTR_6g013240 41.111 90 51 1 371 460 236 323 3.47e-11 66.6
MsG0780036696.01.T01 MTR_7g095350 64.026 303 99 4 360 658 280 576 2.28e-123 378
MsG0780036696.01.T01 MTR_7g095350 56.701 291 104 5 84 355 289 576 7.78e-97 309
MsG0780036696.01.T01 MTR_7g095350 52.941 187 72 2 1 171 91 277 3.07e-50 184
MsG0780036696.01.T01 MTR_7g095350 64.026 303 99 4 360 658 288 584 2.33e-123 379
MsG0780036696.01.T01 MTR_7g095350 56.701 291 104 5 84 355 297 584 7.39e-97 310
MsG0780036696.01.T01 MTR_7g095350 52.941 187 72 2 1 171 99 285 3.56e-50 184
MsG0780036696.01.T01 MTR_3g009910 58.589 326 107 6 360 661 283 604 3.43e-116 360
MsG0780036696.01.T01 MTR_3g009910 47.283 368 143 11 35 358 244 604 4.72e-89 290
MsG0780036696.01.T01 MTR_3g009910 47.236 199 84 5 1 178 89 287 1.07e-42 163
MsG0780036696.01.T01 MTR_7g095560 56.037 323 117 5 360 661 285 603 2.50e-109 343
MsG0780036696.01.T01 MTR_7g095560 50.809 309 115 7 86 358 296 603 1.84e-85 280
MsG0780036696.01.T01 MTR_7g095560 44.279 201 89 4 1 178 89 289 2.10e-38 150
MsG0780036696.01.T01 MTR_6g471290 48.615 397 158 10 1 358 576 965 1.71e-102 334
MsG0780036696.01.T01 MTR_6g471290 51.171 299 122 5 386 661 668 965 1.03e-81 278
MsG0780036696.01.T01 MTR_6g471290 49.457 184 77 4 4 171 92 275 1.52e-37 150
MsG0780036696.01.T01 MTR_6g471290 37.751 249 142 7 279 526 204 440 6.67e-33 136
MsG0780036696.01.T01 MTR_6g471290 34.118 170 94 6 70 223 273 440 5.74e-16 82.4
MsG0780036696.01.T01 MTR_7g105980 61.049 267 96 4 370 629 14 279 2.30e-97 301
MsG0780036696.01.T01 MTR_7g105980 50.896 279 114 6 70 326 2 279 1.50e-74 241
MsG0780036696.01.T01 MTR_0176s0050 46.633 401 176 10 279 661 61 441 3.01e-97 306
MsG0780036696.01.T01 MTR_0176s0050 48.161 299 130 7 84 358 144 441 3.31e-78 256
MsG0780036696.01.T01 MTR_0176s0050 40.278 144 66 5 56 181 2 143 1.46e-17 86.3
MsG0780036696.01.T01 MTR_7g105980 61.049 267 96 4 370 629 84 349 3.76e-96 300
MsG0780036696.01.T01 MTR_7g105980 44.828 348 124 8 1 326 48 349 3.54e-75 246
MsG0780036696.01.T01 MTR_0176s0050 46.633 401 176 10 279 661 130 510 4.24e-96 305
MsG0780036696.01.T01 MTR_0176s0050 48.161 299 130 7 84 358 213 510 4.07e-77 255
MsG0780036696.01.T01 MTR_0176s0050 40.458 131 59 4 58 171 73 201 1.77e-15 80.1
MsG0780036696.01.T01 MTR_0176s0050 46.717 396 177 10 279 661 61 435 6.61e-96 302
MsG0780036696.01.T01 MTR_0176s0050 48.299 294 131 7 84 358 144 435 6.76e-77 253
MsG0780036696.01.T01 MTR_0176s0050 40.278 144 66 5 56 181 2 143 1.58e-17 85.9
MsG0780036696.01.T01 MTR_7g087840 54.785 303 122 6 373 661 288 589 2.87e-93 300
MsG0780036696.01.T01 MTR_7g087840 48.013 302 127 7 86 358 289 589 2.52e-76 255
MsG0780036696.01.T01 MTR_7g087840 49.735 189 75 4 1 171 89 275 2.08e-39 153
MsG0780036696.01.T01 MTR_7g087040 48.214 336 159 6 332 661 610 936 1.59e-85 288
MsG0780036696.01.T01 MTR_7g087040 49.104 279 121 6 99 358 660 936 1.98e-69 244
MsG0780036696.01.T01 MTR_7g087040 57.436 195 77 4 370 559 285 478 7.01e-54 199
MsG0780036696.01.T01 MTR_7g087040 46.632 193 82 5 84 256 287 478 5.84e-38 151
MsG0780036696.01.T01 MTR_7g087040 48.168 191 75 5 1 171 89 275 2.92e-37 149
MsG0780036696.01.T01 MTR_7g087040 41.667 120 51 3 69 171 514 631 1.42e-14 78.2
MsG0780036696.01.T01 MTR_2g064400 42.857 364 168 8 1 329 106 464 1.07e-74 249
MsG0780036696.01.T01 MTR_2g064400 39.085 284 147 7 371 632 185 464 2.37e-43 163
MsG0780036696.01.T01 MTR_7g089610 51.418 282 119 8 292 565 245 516 9.21e-73 244
MsG0780036696.01.T01 MTR_7g089610 52.284 197 76 4 83 262 321 516 1.45e-51 187
MsG0780036696.01.T01 MTR_7g089610 36.397 272 135 11 1 243 124 386 1.42e-31 129
MsG0780036696.01.T01 MTR_6g071510 37.958 382 193 11 279 650 185 532 1.15e-59 214
MsG0780036696.01.T01 MTR_6g071510 35.974 303 145 10 70 347 254 532 7.74e-42 162
MsG0780036696.01.T01 MTR_6g071510 42.083 240 113 6 4 225 73 304 1.16e-37 150
MsG0780036696.01.T01 MTR_7g105510 53.299 197 66 5 1 171 115 311 1.16e-53 187
MsG0780036696.01.T01 MTR_7g095350 52.941 187 72 2 1 171 91 277 3.61e-51 184
MsG0780036696.01.T01 MTR_7g095350 59.091 154 55 3 360 511 280 427 5.40e-46 169
MsG0780036696.01.T01 MTR_7g095350 43.662 142 60 4 84 208 289 427 2.98e-22 100
MsG0780036696.01.T01 MTR_7g095350 52.941 187 72 2 1 171 91 277 3.61e-51 184
MsG0780036696.01.T01 MTR_7g095350 57.764 161 60 3 360 518 280 434 8.15e-48 174
MsG0780036696.01.T01 MTR_7g095350 42.953 149 65 4 84 215 289 434 5.54e-24 105
MsG0780036696.01.T01 MTR_7g095350 52.941 187 72 2 1 171 99 285 3.77e-51 184
MsG0780036696.01.T01 MTR_7g095350 57.764 161 60 3 360 518 288 442 8.52e-48 174
MsG0780036696.01.T01 MTR_7g095350 42.953 149 65 4 84 215 297 442 6.04e-24 105
MsG0780036696.01.T01 MTR_7g092650 43.431 274 123 8 1 256 118 377 3.57e-50 181
MsG0780036696.01.T01 MTR_7g092650 45.259 232 106 7 292 514 239 458 6.93e-48 175
MsG0780036696.01.T01 MTR_7g092650 44.138 145 64 4 83 211 315 458 1.71e-25 110
MsG0780036696.01.T01 MTR_5g024120 39.493 276 88 7 401 661 138 349 4.66e-47 170
MsG0780036696.01.T01 MTR_5g024120 31.099 373 131 10 1 358 88 349 2.96e-39 148
MsG0780036696.01.T01 MTR_3g009910 54.321 162 70 2 360 521 283 440 6.20e-47 172
MsG0780036696.01.T01 MTR_3g009910 47.236 199 84 5 1 178 89 287 1.09e-43 163
MsG0780036696.01.T01 MTR_3g009910 40.000 150 74 4 84 218 292 440 2.06e-22 101
MsG0780036696.01.T01 MTR_7g089620 50.526 190 83 5 332 519 271 451 7.80e-47 172
MsG0780036696.01.T01 MTR_7g089620 50.568 176 63 5 1 156 102 273 7.33e-38 147
MsG0780036696.01.T01 MTR_7g089620 40.940 149 71 4 84 216 304 451 5.59e-22 99.8
MsG0780036696.01.T01 MTR_7g089570 46.091 243 115 9 280 519 242 471 9.76e-47 172
MsG0780036696.01.T01 MTR_7g089570 50.000 174 62 5 1 156 127 293 3.58e-35 139
MsG0780036696.01.T01 MTR_7g089570 40.940 149 71 4 84 216 324 471 1.07e-21 99.4
MsG0780036696.01.T01 MTR_2g032920 48.936 188 88 4 332 519 177 356 1.28e-42 158
MsG0780036696.01.T01 MTR_2g032920 46.784 171 65 5 1 163 34 186 1.61e-31 126
MsG0780036696.01.T01 MTR_2g032920 34.524 168 94 3 64 216 190 356 1.64e-19 91.3
MsG0780036696.01.T01 MTR_6g471300 44.845 194 98 4 332 524 47 232 1.65e-39 145
MsG0780036696.01.T01 MTR_6g471300 38.690 168 86 5 70 221 66 232 2.20e-22 97.1
MsG0780036696.01.T01 MTR_1g115530 92.424 66 5 0 293 358 1 66 7.10e-35 126
MsG0780036696.01.T01 MTR_1g115530 92.424 66 5 0 596 661 1 66 7.10e-35 126
MsG0780036696.01.T01 MTR_4g057860 62.376 101 33 1 246 341 1 101 4.76e-33 122
MsG0780036696.01.T01 MTR_4g057860 62.376 101 33 1 549 644 1 101 4.76e-33 122
MsG0780036696.01.T01 MTR_7g092110 55.932 118 47 3 207 323 78 191 7.06e-32 122
MsG0780036696.01.T01 MTR_7g092110 55.932 118 47 3 510 626 78 191 7.06e-32 122
MsG0780036696.01.T01 MTR_7g095340 70.330 91 24 1 1 88 90 180 9.06e-32 126
MsG0780036696.01.T01 MTR_7g105520 59.000 100 41 0 166 265 2 101 2.04e-31 118
MsG0780036696.01.T01 MTR_7g105520 59.000 100 41 0 469 568 2 101 2.04e-31 118
MsG0780036696.01.T01 MTR_7g095310 49.444 180 66 7 28 182 1 180 1.65e-29 117
MsG0780036696.01.T01 MTR_6g071680 54.082 98 41 1 265 358 3 100 4.11e-28 108
MsG0780036696.01.T01 MTR_6g071680 54.082 98 41 1 568 661 3 100 4.11e-28 108
MsG0780036696.01.T01 MTR_7g114090 30.366 382 219 13 2 349 95 463 3.68e-27 115
MsG0780036696.01.T01 MTR_7g114090 25.828 302 192 10 368 652 177 463 3.44e-11 66.2
MsG0780036696.01.T01 MTR_7g092645 49.505 101 50 1 268 368 6 105 1.90e-26 105
MsG0780036696.01.T01 MTR_7g092645 59.524 84 34 0 571 654 6 89 4.30e-26 103
MsG0780036696.01.T01 MTR_7g089617 49.194 124 45 3 253 358 41 164 1.05e-25 104
MsG0780036696.01.T01 MTR_7g089617 49.194 124 45 3 556 661 41 164 1.05e-25 104
MsG0780036696.01.T01 MTR_7g116580 26.667 360 206 11 3 315 98 446 3.33e-22 100
MsG0780036696.01.T01 MTR_7g116580 26.740 273 173 9 368 618 179 446 9.29e-13 71.6
MsG0780036696.01.T01 MTR_7g095390 58.537 82 30 1 1 78 90 171 3.75e-22 94.4
MsG0780036696.01.T01 MTR_7g095660 50.505 99 36 3 242 339 18 104 7.19e-21 89.7
MsG0780036696.01.T01 MTR_7g095660 50.505 99 36 3 545 642 18 104 7.19e-21 89.7
MsG0780036696.01.T01 MTR_7g111100 60.870 69 27 0 256 324 90 158 2.05e-19 87.4
MsG0780036696.01.T01 MTR_7g111100 60.870 69 27 0 559 627 90 158 2.05e-19 87.4
MsG0780036696.01.T01 MTR_5g090500 34.637 179 98 8 2 169 13 183 7.04e-16 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 115 sgRNAs with CRISPR-Local

Find 455 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCTAATATGGACTACTTT+TGG 0.238750 7:+12066989 MsG0780036696.01.T01:CDS
ATCCTAATATGGACTACTTT+TGG 0.238750 7:+12073597 MsG0780036696.01.T01:CDS
CTTTAAGCACCTCATGAATA+AGG 0.298664 7:-12067693 None:intergenic
CTTTAAGCACCTCATGAATA+AGG 0.298664 7:-12074302 None:intergenic
GATGGATGCAGTTGGAAAAT+AGG 0.304259 7:-12065077 None:intergenic
TGTGAATCAAGATATGTTTC+GGG 0.314863 7:+12065053 MsG0780036696.01.T01:CDS
ATGTGAATCAAGATATGTTT+CGG 0.322952 7:+12065052 MsG0780036696.01.T01:CDS
ATCCAAAAGTAGTCCATATT+AGG 0.333779 7:-12066991 None:intergenic
ATCCAAAAGTAGTCCATATT+AGG 0.333779 7:-12073599 None:intergenic
GAATTCAATCACAACAATAA+TGG 0.350796 7:-12074487 None:intergenic
ATTTCAAAACCTTCAACAAT+TGG 0.355615 7:+12066942 MsG0780036696.01.T01:CDS
ATTTCAAAACCTTCAACAAT+TGG 0.355615 7:+12073550 MsG0780036696.01.T01:CDS
TCTTGTGACAAATTCTATAT+AGG 0.371244 7:+12067622 MsG0780036696.01.T01:CDS
TCTTGTGACAAATTCTATAT+AGG 0.371244 7:+12074231 MsG0780036696.01.T01:CDS
TCCCTATGTTGGTCACCTAA+TGG 0.373909 7:-12064796 None:intergenic
GGGAGCATCTGATCCTAATA+TGG 0.378377 7:+12066978 MsG0780036696.01.T01:CDS
GGGAGCATCTGATCCTAATA+TGG 0.378377 7:+12073586 MsG0780036696.01.T01:CDS
AGATATCCACATCATCTCTT+TGG 0.386509 7:+12065688 MsG0780036696.01.T01:CDS
AGATATCCACATCATCTCTT+TGG 0.386509 7:+12072295 MsG0780036696.01.T01:CDS
TTCTCGACATGACGTGATCT+TGG 0.398614 7:-12065718 None:intergenic
TTCTCGACATGACGTGATCT+TGG 0.398614 7:-12072325 None:intergenic
CTCTCATCCTTTGAATATAG+TGG 0.406219 7:+12065595 MsG0780036696.01.T01:CDS
CTCTCATCCTTTGAATATAG+TGG 0.406219 7:+12072202 MsG0780036696.01.T01:CDS
GGCACCCTTAGCAATTCCTT+TGG 0.408075 7:-12064839 None:intergenic
GCAACAACAGTTATCTCATC+TGG 0.418118 7:-12065565 None:intergenic
GCAACAACAGTTATCTCATC+TGG 0.418118 7:-12072172 None:intergenic
GAATAGCAGTTCAATACGTT+TGG 0.424083 7:-12064860 None:intergenic
TTAATAACTCCAATTGTTGA+AGG 0.427707 7:-12066951 None:intergenic
TTAATAACTCCAATTGTTGA+AGG 0.427707 7:-12073559 None:intergenic
AATGATTCTGCAATTCTTGA+AGG 0.434167 7:-12072077 None:intergenic
TCTATATAGGTGCCGAAAGA+TGG 0.444813 7:+12067635 MsG0780036696.01.T01:CDS
TCTATATAGGTGCCGAAAGA+TGG 0.444813 7:+12074244 MsG0780036696.01.T01:CDS
GAAAATTTACTCGGATAGAA+TGG 0.454620 7:-12064774 None:intergenic
TTCCATTAGGTGACCAACAT+AGG 0.463838 7:+12064794 MsG0780036696.01.T01:CDS
TAAAGCTCCAAGGTTATTGA+AGG 0.471745 7:+12065639 MsG0780036696.01.T01:CDS
TAAAGCTCCAAGGTTATTGA+AGG 0.471745 7:+12072246 MsG0780036696.01.T01:CDS
AGCGAACTTAACGAAGGTCT+TGG 0.471991 7:+12066915 MsG0780036696.01.T01:CDS
AGCGAACTTAACGAAGGTCT+TGG 0.471991 7:+12073523 MsG0780036696.01.T01:CDS
GTAGCACCAATGGACTTCTC+TGG 0.477151 7:+12064991 MsG0780036696.01.T01:CDS
AGATGAAGTTACAGTTATCA+AGG 0.480284 7:-12065113 None:intergenic
AACACTACAAAGTTATAAGT+TGG 0.486774 7:-12067735 None:intergenic
AACACTACAAAGTTATAAGT+TGG 0.486774 7:-12074344 None:intergenic
CTACTAGGAGGCATTTCTCT+AGG 0.492470 7:-12064972 None:intergenic
AGTTAGCCAGTCATCTATTG+AGG 0.495680 7:+12067566 MsG0780036696.01.T01:CDS
AGTTAGCCAGTCATCTATTG+AGG 0.495680 7:+12074175 MsG0780036696.01.T01:CDS
GTGTCAGATAAGAGAGCAAA+GGG 0.497308 7:-12064928 None:intergenic
TTTAATCCAGAAAATCCAAC+CGG 0.499355 7:-12071956 None:intergenic
GTGTCCAAATTTAGCTTCAC+CGG 0.500137 7:+12071908 MsG0780036696.01.T01:intron
AGAGCAAAGGGAAATTTGTA+TGG 0.501584 7:-12064916 None:intergenic
AGAAGTCCATTGGTGCTACT+AGG 0.508255 7:-12064987 None:intergenic
TCCATTAGGTGACCAACATA+GGG 0.510943 7:+12064795 MsG0780036696.01.T01:CDS
ATTGACAAATTGATTTCCAA+AGG 0.513431 7:+12064823 MsG0780036696.01.T01:CDS
TATGATCATGATGCCTTCAC+AGG 0.517005 7:+12065747 MsG0780036696.01.T01:CDS
TATGATCATGATGCCTTCAC+AGG 0.517005 7:+12072354 MsG0780036696.01.T01:CDS
TACTCGGATAGAATGGATCA+TGG 0.521052 7:-12064767 None:intergenic
TTCTAAATGTTACCAACTTG+AGG 0.523082 7:+12072048 MsG0780036696.01.T01:CDS
CACATTCCTCAATAGATGAC+TGG 0.525938 7:-12067572 None:intergenic
CACATTCCTCAATAGATGAC+TGG 0.525938 7:-12074181 None:intergenic
CACCTAATGGAAAATTTACT+CGG 0.528311 7:-12064783 None:intergenic
TGTCAATGACATCCCTATGT+TGG 0.535171 7:-12064807 None:intergenic
GATTTCCAAAGGAATTGCTA+AGG 0.537839 7:+12064834 MsG0780036696.01.T01:CDS
TTGAATCCAGAGAAGTCCAT+TGG 0.541899 7:-12064997 None:intergenic
CATAGGCAAAGAAGAGAACA+TGG 0.546734 7:+12067475 MsG0780036696.01.T01:CDS
CATAGGCAAAGAAGAGAACA+TGG 0.546734 7:+12074084 MsG0780036696.01.T01:CDS
ATTTCCAAAGGAATTGCTAA+GGG 0.551784 7:+12064835 MsG0780036696.01.T01:CDS
GTCTACAAGATGGATGCAGT+TGG 0.552883 7:-12065085 None:intergenic
TTTGACTGACTCACCTGTGA+AGG 0.553774 7:-12065760 None:intergenic
TTTGACTGACTCACCTGTGA+AGG 0.553774 7:-12072367 None:intergenic
ATTAGAAATTCACATGTGGA+TGG 0.563552 7:+12067448 MsG0780036696.01.T01:CDS
ATTAGAAATTCACATGTGGA+TGG 0.563552 7:+12074057 MsG0780036696.01.T01:CDS
AAATGTGACAACAATTGTGT+TGG 0.571151 7:+12071979 MsG0780036696.01.T01:CDS
TGTGTCAGATAAGAGAGCAA+AGG 0.573017 7:-12064929 None:intergenic
GTGACAACAATTGTGTTGGA+TGG 0.573798 7:+12071983 MsG0780036696.01.T01:CDS
TGAAGGTGACGTCCTCAAGT+TGG 0.573852 7:-12072060 None:intergenic
CACATGTGGATGGATCTCAT+AGG 0.576807 7:+12067458 MsG0780036696.01.T01:CDS
CACATGTGGATGGATCTCAT+AGG 0.576807 7:+12074067 MsG0780036696.01.T01:CDS
TGTGTAGCCACTATATTCAA+AGG 0.577002 7:-12065602 None:intergenic
TGTGTAGCCACTATATTCAA+AGG 0.577002 7:-12072209 None:intergenic
ACAATTGGAGTTATTAATCG+AGG 0.578365 7:+12066957 MsG0780036696.01.T01:CDS
ACAATTGGAGTTATTAATCG+AGG 0.578365 7:+12073565 MsG0780036696.01.T01:CDS
AACTTCATGTTAAAGCTCCA+AGG 0.580258 7:+12065629 MsG0780036696.01.T01:CDS
AACTTCATGTTAAAGCTCCA+AGG 0.580258 7:+12072236 MsG0780036696.01.T01:CDS
TAGAATGGATCATGGGACCT+TGG 0.583139 7:-12064759 None:intergenic
GGCTAACTCAATCACATCCA+TGG 0.586528 7:-12067551 None:intergenic
GGCTAACTCAATCACATCCA+TGG 0.586528 7:-12074160 None:intergenic
CAAGGGTGAAGTCTACAAGA+TGG 0.587519 7:-12065095 None:intergenic
TTGAATATAGTGGCTACACA+AGG 0.587836 7:+12065605 MsG0780036696.01.T01:CDS
TTGAATATAGTGGCTACACA+AGG 0.587836 7:+12072212 MsG0780036696.01.T01:CDS
TTGAAATATGTCGAGTTACG+TGG 0.593759 7:+12067517 MsG0780036696.01.T01:CDS
TTGAAATATGTCGAGTTACG+TGG 0.593759 7:+12074126 MsG0780036696.01.T01:CDS
CAATTGGAGTTATTAATCGA+GGG 0.598215 7:+12066958 MsG0780036696.01.T01:CDS
CAATTGGAGTTATTAATCGA+GGG 0.598215 7:+12073566 MsG0780036696.01.T01:CDS
ATGCCTCCTAGTAGCACCAA+TGG 0.599548 7:+12064981 MsG0780036696.01.T01:CDS
TCTCAGAAAACTTTCTCTGA+CGG 0.603077 7:+12067041 MsG0780036696.01.T01:CDS
TCTCAGAAAACTTTCTCTGA+CGG 0.603077 7:+12073649 MsG0780036696.01.T01:CDS
GATGAAGTTACAGTTATCAA+GGG 0.618853 7:-12065112 None:intergenic
ATTGCACCAAAGAGATGATG+TGG 0.620114 7:-12065694 None:intergenic
ATTGCACCAAAGAGATGATG+TGG 0.620114 7:-12072301 None:intergenic
ACTCGGATAGAATGGATCAT+GGG 0.621990 7:-12064766 None:intergenic
TGATCGTAACCTTATTCATG+AGG 0.624197 7:+12067684 MsG0780036696.01.T01:CDS
TGATCGTAACCTTATTCATG+AGG 0.624197 7:+12074293 MsG0780036696.01.T01:CDS
TAACATTTAGAAAACAACTC+AGG 0.631015 7:-12072037 None:intergenic
AGTCCATTGGTGCTACTAGG+AGG 0.635039 7:-12064984 None:intergenic
TCAGATTAGAAATTCACATG+TGG 0.645312 7:+12067444 MsG0780036696.01.T01:intron
TCAGATTAGAAATTCACATG+TGG 0.645312 7:+12074053 MsG0780036696.01.T01:intron
ACGTGGTTGTGTTTGCACCA+TGG 0.649381 7:+12067534 MsG0780036696.01.T01:CDS
ACGTGGTTGTGTTTGCACCA+TGG 0.649381 7:+12074143 MsG0780036696.01.T01:CDS
CATTTGAAAATAATTGACTG+TGG 0.673749 7:+12072133 MsG0780036696.01.T01:CDS
CAATTCATGATGCATTACCA+AGG 0.695900 7:+12064742 None:intergenic
TGAATATAGTGGCTACACAA+GGG 0.707131 7:+12065606 MsG0780036696.01.T01:CDS
TGAATATAGTGGCTACACAA+GGG 0.707131 7:+12072213 MsG0780036696.01.T01:CDS
ACAGATAGCGAACTTAACGA+AGG 0.711500 7:+12066909 MsG0780036696.01.T01:intron
ACAGATAGCGAACTTAACGA+AGG 0.711500 7:+12073517 MsG0780036696.01.T01:intron
GTGAATCAAGATATGTTTCG+GGG 0.727241 7:+12065054 MsG0780036696.01.T01:CDS
TCATTGAAAATAATTGACTG+TGG 0.761572 7:+12065526 MsG0780036696.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG - Chr7:12066182-12066201 None:intergenic 0.0%
!!! ATTATTAAAAAAATTATTTT+TGG + Chr7:12069624-12069643 MsG0780036696.01.T01:intron 0.0%
!! AAAAAAACTAAATATTAGTT+AGG + Chr7:12070911-12070930 MsG0780036696.01.T01:intron 10.0%
!! AAAAAACTAAATATTAGTTA+GGG + Chr7:12070912-12070931 MsG0780036696.01.T01:intron 10.0%
!! ATTGTAAAAAAAATTAAAAG+AGG + Chr7:12069775-12069794 MsG0780036696.01.T01:intron 10.0%
!! TAATTTACTTTAAATATTAC+TGG + Chr7:12066881-12066900 MsG0780036696.01.T01:intron 10.0%
!!! ATTTTAAAAATAAAAATCCT+GGG - Chr7:12068433-12068452 None:intergenic 10.0%
!!! TAAATTGCTATTTTTTTAAT+AGG + Chr7:12067822-12067841 MsG0780036696.01.T01:intron 10.0%
!!! TAATTTTTATTACTCAATAT+AGG - Chr7:12069588-12069607 None:intergenic 10.0%
!!! TATTCAAACTTTTATTTTTT+AGG + Chr7:12067069-12067088 MsG0780036696.01.T01:intron 10.0%
!!! TTTTTAATTTATTTTACTAG+TGG - Chr7:12068395-12068414 None:intergenic 10.0%
!! AAATTATGGGTTTATAATTA+TGG - Chr7:12066236-12066255 None:intergenic 15.0%
!! AAATTATGTACTTATCAATT+TGG - Chr7:12070874-12070893 None:intergenic 15.0%
!! AATTTATGCTATGATTTATT+TGG + Chr7:12070238-12070257 MsG0780036696.01.T01:intron 15.0%
!! ACTAATATCCATAAAAAAAT+AGG - Chr7:12067120-12067139 None:intergenic 15.0%
!! ATATATATATATAGCATACA+AGG - Chr7:12070292-12070311 None:intergenic 15.0%
!! ATATATTGTTAAGAAAATAG+CGG + Chr7:12070320-12070339 MsG0780036696.01.T01:intron 15.0%
!! ATTCTTTCAAAATAAAAAAG+AGG + Chr7:12069803-12069822 MsG0780036696.01.T01:intron 15.0%
!! CTAATATCCATAAAAAAAAT+AGG - Chr7:12073728-12073747 None:intergenic 15.0%
!! GGTTTCAAAAAAAAAATTAT+GGG - Chr7:12066249-12066268 None:intergenic 15.0%
!!! AATAATATTTTTTAAAACCC+AGG + Chr7:12068413-12068432 MsG0780036696.01.T01:intron 15.0%
!!! ACTTTTTAGAATTTTTAAAC+CGG + Chr7:12065332-12065351 MsG0780036696.01.T01:intron 15.0%
!!! AGTTATAACCTATTTTTTTA+TGG + Chr7:12067109-12067128 MsG0780036696.01.T01:intron 15.0%
!!! ATAATACGATATTATTTTTG+TGG + Chr7:12070652-12070671 MsG0780036696.01.T01:intron 15.0%
!!! ATTATGGGTTTTTATAATTA+TGG - Chr7:12072846-12072865 None:intergenic 15.0%
!!! GAACTATATTTCATTTTTTT+AGG - Chr7:12070942-12070961 None:intergenic 15.0%
!!! GATTTTAAAAATAAAAATCC+TGG - Chr7:12068434-12068453 None:intergenic 15.0%
!!! GTTATAACCTATTTTTTTTA+TGG + Chr7:12073718-12073737 MsG0780036696.01.T01:intron 15.0%
!!! TTGGATTTTAGATATTATAA+TGG + Chr7:12067008-12067027 MsG0780036696.01.T01:CDS 15.0%
!!! TTTTTTTTTCCTTCAAATTT+GGG + Chr7:12066514-12066533 MsG0780036696.01.T01:intron 15.0%
!!! TTTTTTTTTTCCTTCAAATT+TGG + Chr7:12066513-12066532 MsG0780036696.01.T01:intron 15.0%
!! AAAAAATAAGAAAAAGCTTG+TGG - Chr7:12066801-12066820 None:intergenic 20.0%
!! AAACAATAAACATCATAAGT+AGG - Chr7:12065787-12065806 None:intergenic 20.0%
!! CATTTAAACATATGTATGTT+TGG - Chr7:12066148-12066167 None:intergenic 20.0%
!! GAATAATTAGATGAAAGATT+TGG - Chr7:12069142-12069161 None:intergenic 20.0%
!! GGGTTTCAAAAAAAAAATTA+TGG - Chr7:12066250-12066269 None:intergenic 20.0%
!! GGGTTTCAAAAAAAAATTAT+GGG - Chr7:12072861-12072880 None:intergenic 20.0%
!! GTTTATGTTATAATCAAGTA+AGG - Chr7:12070753-12070772 None:intergenic 20.0%
!! TGGGTTTCAAAAAAAAATTA+TGG - Chr7:12072862-12072881 None:intergenic 20.0%
!!! AAGAAGTTGATATAAATTTG+TGG - Chr7:12066271-12066290 None:intergenic 20.0%
!!! AGAAGTTGATATAAATTTGT+GGG - Chr7:12066270-12066289 None:intergenic 20.0%
!!! ATATGAGCCATAATTTTATT+GGG - Chr7:12071888-12071907 None:intergenic 20.0%
!!! ATATGAGCCATAATTTTTAT+TGG - Chr7:12065282-12065301 None:intergenic 20.0%
!!! GAACTATACTTCATTTTTTT+AGG - Chr7:12071018-12071037 None:intergenic 20.0%
!!! GAATGAAACTGATTTTATTT+TGG + Chr7:12064885-12064904 MsG0780036696.01.T01:CDS 20.0%
!!! TATGAGCCATAATTTTTATT+GGG - Chr7:12065281-12065300 None:intergenic 20.0%
!!! TATTATAGTCAAACATGTTT+TGG - Chr7:12071262-12071281 None:intergenic 20.0%
!!! TTCTTATTTTTTTCTGCTAT+TGG + Chr7:12066809-12066828 MsG0780036696.01.T01:intron 20.0%
!!! TTTCAAATTTTTGTGACTAT+TGG + Chr7:12070720-12070739 MsG0780036696.01.T01:intron 20.0%
!!! TTTTAGAATTTTTAAACCGT+TGG + Chr7:12065335-12065354 MsG0780036696.01.T01:intron 20.0%
!!! TTTTTGGAATAATATTCTTC+TGG + Chr7:12066354-12066373 MsG0780036696.01.T01:intron 20.0%
! AAAAAATTTGCATCTGGATT+GGG - Chr7:12066339-12066358 None:intergenic 25.0%
! AAAAACAAAACACTGTTGTT+AGG + Chr7:12069104-12069123 MsG0780036696.01.T01:intron 25.0%
! AAAACAAAACACTGTTGTTA+GGG + Chr7:12069105-12069124 MsG0780036696.01.T01:intron 25.0%
! AAATAGCATAACCAATCAAA+CGG - Chr7:12070964-12070983 None:intergenic 25.0%
! AACACTACAAAGTTATAAGT+TGG - Chr7:12067738-12067757 None:intergenic 25.0%
! AAGAACACCCAATAAAATTA+TGG + Chr7:12071878-12071897 MsG0780036696.01.T01:intron 25.0%
! AATAGTTTATCTCGAAAAGA+AGG + Chr7:12069394-12069413 MsG0780036696.01.T01:intron 25.0%
! AGAAAAAGGGAAGATAAAAA+GGG + Chr7:12068160-12068179 MsG0780036696.01.T01:intron 25.0%
! AGAACACCCAATAAAAATTA+TGG + Chr7:12065272-12065291 MsG0780036696.01.T01:intron 25.0%
! ATACCAACTCTTAAAAATCA+TGG - Chr7:12067362-12067381 None:intergenic 25.0%
! ATCAATACAAGAATACTGAA+AGG - Chr7:12065247-12065266 None:intergenic 25.0%
! ATCACTTAACTTAAAATTCC+AGG - Chr7:12070835-12070854 None:intergenic 25.0%
! ATGTAAGATACAATACAATC+AGG - Chr7:12071140-12071159 None:intergenic 25.0%
! ATGTGAATCAAGATATGTTT+CGG + Chr7:12065052-12065071 MsG0780036696.01.T01:CDS 25.0%
! ATTTCAAAACCTTCAACAAT+TGG + Chr7:12066942-12066961 MsG0780036696.01.T01:CDS 25.0%
! ATTTGAACATTGTTAACTGT+GGG + Chr7:12065169-12065188 MsG0780036696.01.T01:intron 25.0%
! ATTTGATATGTAAAGTGAGA+AGG - Chr7:12068564-12068583 None:intergenic 25.0%
! CAAATCTTTCATACTTAACT+TGG - Chr7:12071168-12071187 None:intergenic 25.0%
! CAAGTTAAGTATGAAAGATT+TGG + Chr7:12071166-12071185 MsG0780036696.01.T01:intron 25.0%
! CACATTGTGAACATTAAATA+AGG - Chr7:12067190-12067209 None:intergenic 25.0%
! CATTTGAAAATAATTGACTG+TGG + Chr7:12072133-12072152 MsG0780036696.01.T01:CDS 25.0%
! CGATTAATTAAAAGAAACCA+AGG - Chr7:12066838-12066857 None:intergenic 25.0%
! GAATTCAATCACAACAATAA+TGG - Chr7:12074490-12074509 None:intergenic 25.0%
! TAAAATACAAAAATGTTCCC+TGG + Chr7:12070814-12070833 MsG0780036696.01.T01:intron 25.0%
! TAACATTTAGAAAACAACTC+AGG - Chr7:12065434-12065453 None:intergenic 25.0%
! TAATAGCATAATCAATCCAA+CGG - Chr7:12071040-12071059 None:intergenic 25.0%
! TAATTCATTGCGATAAACAT+TGG + Chr7:12067787-12067806 MsG0780036696.01.T01:intron 25.0%
! TAGAAAAAGGGAAGATAAAA+AGG + Chr7:12068159-12068178 MsG0780036696.01.T01:intron 25.0%
! TATTCCAAAAAATTTGCATC+TGG - Chr7:12066345-12066364 None:intergenic 25.0%
! TCACTTAACTTAAAATTCCA+GGG - Chr7:12070834-12070853 None:intergenic 25.0%
! TCATTGAAAATAATTGACTG+TGG + Chr7:12065526-12065545 MsG0780036696.01.T01:CDS 25.0%
! TCTTGTGACAAATTCTATAT+AGG + Chr7:12067622-12067641 MsG0780036696.01.T01:CDS 25.0%
! TGATGAATGATATCTTATTG+CGG - Chr7:12067964-12067983 None:intergenic 25.0%
! TTAATAACTCCAATTGTTGA+AGG - Chr7:12066954-12066973 None:intergenic 25.0%
! TTATATATTCCTCTTCTACA+TGG + Chr7:12068010-12068029 MsG0780036696.01.T01:intron 25.0%
! TTATGGGTTTATAATTATGG+AGG - Chr7:12066233-12066252 None:intergenic 25.0%
! TTGGTTAAATTCTTCAACAA+TGG - Chr7:12069062-12069081 None:intergenic 25.0%
!! AATTCTAAAAAGTTTACGAC+CGG - Chr7:12065325-12065344 None:intergenic 25.0%
!! ATCATAGCAACAATATTTTG+AGG - Chr7:12067668-12067687 None:intergenic 25.0%
!! ATGGGTTTTTATAATTATGG+AGG - Chr7:12072843-12072862 None:intergenic 25.0%
!! ATTGACAAATTGATTTCCAA+AGG + Chr7:12064823-12064842 MsG0780036696.01.T01:CDS 25.0%
!! CATATGAGCCATAATTTTAT+TGG - Chr7:12071889-12071908 None:intergenic 25.0%
!! CATATGTTTAAATGCTCTTT+TGG + Chr7:12066154-12066173 MsG0780036696.01.T01:intron 25.0%
!! TTTTAATCCAGAAAATCCAA+CGG - Chr7:12065354-12065373 None:intergenic 25.0%
!!! CGAATGAAACTGATTTTATT+TGG + Chr7:12064884-12064903 MsG0780036696.01.T01:CDS 25.0%
!!! GAAGAAATTCTAAAGTGTTA+TGG + Chr7:12068619-12068638 MsG0780036696.01.T01:intron 25.0%
!!! GCAACTTTTTAAAAGTTAAC+AGG + Chr7:12067856-12067875 MsG0780036696.01.T01:intron 25.0%
!!! TCTTTTCGAGATAAACTATT+AGG - Chr7:12069394-12069413 None:intergenic 25.0%
!!! TTGTCATAAGTTGTTTTCAT+AGG - Chr7:12065978-12065997 None:intergenic 25.0%
!!! TTTAGAATTTTTAAACCGGT+TGG + Chr7:12071941-12071960 MsG0780036696.01.T01:CDS 25.0%
AAAAATTTGCATCTGGATTG+GGG - Chr7:12066338-12066357 None:intergenic 30.0%
AAAATGAAGTATAGTTCCGT+TGG + Chr7:12071021-12071040 MsG0780036696.01.T01:intron 30.0%
AAAGAGAAAGAGAAAAGAGA+AGG + Chr7:12070577-12070596 MsG0780036696.01.T01:intron 30.0%
AAATATAAGAACCACATACC+TGG - Chr7:12068310-12068329 None:intergenic 30.0%
AAATGTGACAACAATTGTGT+TGG + Chr7:12065373-12065392 MsG0780036696.01.T01:intron 30.0%
AACATGCCTATATATTCGAA+TGG - Chr7:12065896-12065915 None:intergenic 30.0%
AACTCTTAAAAATCATGGCT+GGG - Chr7:12067357-12067376 None:intergenic 30.0%
AATGATTCTGCAATTCTTGA+AGG - Chr7:12065474-12065493 None:intergenic 30.0%
ACAATTGGAGTTATTAATCG+AGG + Chr7:12066957-12066976 MsG0780036696.01.T01:CDS 30.0%
ACTTTAGCGCAATAGAAAAA+GGG + Chr7:12068147-12068166 MsG0780036696.01.T01:intron 30.0%
AGATGAAGTTACAGTTATCA+AGG - Chr7:12065116-12065135 None:intergenic 30.0%
ATATATAGGCATGTTTGGAT+TGG + Chr7:12065901-12065920 MsG0780036696.01.T01:intron 30.0%
ATATTGTGGCAAATTGAGAT+TGG - Chr7:12071327-12071346 None:intergenic 30.0%
ATCCAAAAGTAGTCCATATT+AGG - Chr7:12066994-12067013 None:intergenic 30.0%
ATCTCAATTTGCCACAATAT+TGG + Chr7:12071327-12071346 MsG0780036696.01.T01:intron 30.0%
ATTAGAAATTCACATGTGGA+TGG + Chr7:12067448-12067467 MsG0780036696.01.T01:CDS 30.0%
ATTTCCAAAGGAATTGCTAA+GGG + Chr7:12064835-12064854 MsG0780036696.01.T01:CDS 30.0%
CAAAAAACCTTCAATAACCT+TGG - Chr7:12065649-12065668 None:intergenic 30.0%
CAAAAAATTTGCATCTGGAT+TGG - Chr7:12066340-12066359 None:intergenic 30.0%
CAAATGAAACAATGTTGAAC+TGG - Chr7:12065154-12065173 None:intergenic 30.0%
CAATTGGAGTTATTAATCGA+GGG + Chr7:12066958-12066977 MsG0780036696.01.T01:CDS 30.0%
CACCTAATGGAAAATTTACT+CGG - Chr7:12064786-12064805 None:intergenic 30.0%
CAGATAAAGATATGAAGAAG+AGG - Chr7:12068459-12068478 None:intergenic 30.0%
CATGAATTGATCCAATATTG+TGG - Chr7:12071341-12071360 None:intergenic 30.0%
CATTTGAACATTGTTAACTG+TGG + Chr7:12065168-12065187 MsG0780036696.01.T01:intron 30.0%
CCAATAAATCTCTATTAACC+AGG + Chr7:12068289-12068308 MsG0780036696.01.T01:intron 30.0%
CCTGGTTAATAGAGATTTAT+TGG - Chr7:12068292-12068311 None:intergenic 30.0%
CTACACAACTATGTAGATAT+TGG - Chr7:12068188-12068207 None:intergenic 30.0%
CTGAACATGTGTTTATAAGT+CGG + Chr7:12067287-12067306 MsG0780036696.01.T01:intron 30.0%
GAAAATTTACTCGGATAGAA+TGG - Chr7:12064777-12064796 None:intergenic 30.0%
GAAAGAGAATTAAGGTCTAA+CGG + Chr7:12070605-12070624 MsG0780036696.01.T01:intron 30.0%
GAAATATAGTTCCGTTTGAT+TGG + Chr7:12070950-12070969 MsG0780036696.01.T01:intron 30.0%
GATACTCTTTATTACTACAG+CGG + Chr7:12069201-12069220 MsG0780036696.01.T01:intron 30.0%
GATGAAGTTACAGTTATCAA+GGG - Chr7:12065115-12065134 None:intergenic 30.0%
GCAATAAGATATCATTCATC+AGG + Chr7:12067963-12067982 MsG0780036696.01.T01:intron 30.0%
TACTTTAGCGCAATAGAAAA+AGG + Chr7:12068146-12068165 MsG0780036696.01.T01:intron 30.0%
TATCCGAGTAAATTTCCATT+AGG + Chr7:12071389-12071408 MsG0780036696.01.T01:intron 30.0%
TATTTAACACCATGTAGAAG+AGG - Chr7:12068022-12068041 None:intergenic 30.0%
TCAATTCATGATGCATTACA+AGG + Chr7:12071351-12071370 MsG0780036696.01.T01:intron 30.0%
TCACCTAATGGAAATTTACT+CGG - Chr7:12071395-12071414 None:intergenic 30.0%
TCAGATTAGAAATTCACATG+TGG + Chr7:12067444-12067463 MsG0780036696.01.T01:intron 30.0%
TGAACATGTGTTTATAAGTC+GGG + Chr7:12067288-12067307 MsG0780036696.01.T01:intron 30.0%
TGTGAATCAAGATATGTTTC+GGG + Chr7:12065053-12065072 MsG0780036696.01.T01:CDS 30.0%
TTCGAATATATAGGCATGTT+TGG + Chr7:12065896-12065915 MsG0780036696.01.T01:intron 30.0%
TTCTAAATGTTACCAACTTG+AGG + Chr7:12065442-12065461 MsG0780036696.01.T01:intron 30.0%
TTTAATCCAGAAAATCCAAC+CGG - Chr7:12065353-12065372 None:intergenic 30.0%
! ATCCGAGTAAATTTTCCATT+AGG + Chr7:12064781-12064800 MsG0780036696.01.T01:CDS 30.0%
! GAATAATATTCTTCTGGTTG+TGG + Chr7:12066360-12066379 MsG0780036696.01.T01:intron 30.0%
! GCTTATTTGAGTTTATCTAC+TGG + Chr7:12065923-12065942 MsG0780036696.01.T01:intron 30.0%
! TAATCCTTTTCAAATCCATG+CGG + Chr7:12070214-12070233 MsG0780036696.01.T01:intron 30.0%
! TACTTTAAAGAGTTCCACTT+CGG + Chr7:12067252-12067271 MsG0780036696.01.T01:intron 30.0%
! TTTTAAACCGTTGGATTTTC+TGG + Chr7:12065344-12065363 MsG0780036696.01.T01:intron 30.0%
!! AATAAAGAGTATCAATCCAC+AGG - Chr7:12069194-12069213 None:intergenic 30.0%
!! ATAAAGAGTATCAATCCACA+GGG - Chr7:12069193-12069212 None:intergenic 30.0%
!! ATCCTAATATGGACTACTTT+TGG + Chr7:12066989-12067008 MsG0780036696.01.T01:CDS 30.0%
!! CTATCATATCCTCTTTTTCA+CGG + Chr7:12069347-12069366 MsG0780036696.01.T01:intron 30.0%
!!! ATATACCACTATGTCGATTT+TGG - Chr7:12065855-12065874 None:intergenic 30.0%
!!! CAAGGTTATTGAAGGTTTTT+TGG + Chr7:12065647-12065666 MsG0780036696.01.T01:CDS 30.0%
!!! CAATCCAGATGCAAATTTTT+TGG + Chr7:12066338-12066357 MsG0780036696.01.T01:intron 30.0%
!!! TATACCACTATGTCGATTTT+GGG - Chr7:12065854-12065873 None:intergenic 30.0%
!!! TGAAAGAGTCGAAAGTTTTT+TGG - Chr7:12071298-12071317 None:intergenic 30.0%
AAAAGTGGAGGGAGAATTTA+GGG - Chr7:12068534-12068553 None:intergenic 35.0%
AAACAAACACAACCGATGTT+AGG + Chr7:12068868-12068887 MsG0780036696.01.T01:intron 35.0%
AAAGAGAAAAGAGAAGGAAG+AGG + Chr7:12070583-12070602 MsG0780036696.01.T01:intron 35.0%
AACAAACACAACCGATGTTA+GGG + Chr7:12068869-12068888 MsG0780036696.01.T01:intron 35.0%
AACATGTGTTTATAAGTCGG+GGG + Chr7:12067290-12067309 MsG0780036696.01.T01:intron 35.0%
AACTTCATGTTAAAGCTCCA+AGG + Chr7:12065629-12065648 MsG0780036696.01.T01:CDS 35.0%
AAGGATGTGTTAAAAGTGGA+GGG - Chr7:12068545-12068564 None:intergenic 35.0%
AATACCAATCCGTGAAAAAG+AGG - Chr7:12069359-12069378 None:intergenic 35.0%
AGAGCAAAGGGAAATTTGTA+TGG - Chr7:12064919-12064938 None:intergenic 35.0%
AGATATCCACATCATCTCTT+TGG + Chr7:12065688-12065707 MsG0780036696.01.T01:CDS 35.0%
AGGAAGAGGAAAGAGAATTA+AGG + Chr7:12070597-12070616 MsG0780036696.01.T01:intron 35.0%
AGTGTACGGTTAACTATCAT+CGG + Chr7:12069873-12069892 MsG0780036696.01.T01:intron 35.0%
ATACGAAAAAACACACAGAC+TGG + Chr7:12068369-12068388 MsG0780036696.01.T01:intron 35.0%
ATCGCCATATCCAAACAAAA+GGG + Chr7:12068254-12068273 MsG0780036696.01.T01:intron 35.0%
ATCTCTATTAACCAGGTATG+TGG + Chr7:12068296-12068315 MsG0780036696.01.T01:intron 35.0%
ATGTTGTCAACCTTTGATAG+TGG + Chr7:12065813-12065832 MsG0780036696.01.T01:intron 35.0%
ATTGCAAGACCCAAATTTGA+AGG - Chr7:12066526-12066545 None:intergenic 35.0%
CAAAACGCAATTATGCAACT+CGG + Chr7:12069827-12069846 MsG0780036696.01.T01:intron 35.0%
CAACTCTTAAAAATCATGGC+TGG - Chr7:12067358-12067377 None:intergenic 35.0%
CAATACCAAAAGCAAAAGAG+AGG + Chr7:12067932-12067951 MsG0780036696.01.T01:intron 35.0%
CAGAAACAAACACAAGTGTA+CGG + Chr7:12069859-12069878 MsG0780036696.01.T01:intron 35.0%
CATAGTGGTATATTGCATTG+TGG + Chr7:12065862-12065881 MsG0780036696.01.T01:intron 35.0%
CCGGTTTAATAAAACGAACT+CGG - Chr7:12068812-12068831 None:intergenic 35.0%
CCTGAACATGTGTTATAAGT+CGG + Chr7:12073896-12073915 MsG0780036696.01.T01:intron 35.0%
CGACTTATAAACACATGTTC+AGG - Chr7:12067289-12067308 None:intergenic 35.0%
CTAAACCATGAAATCCCAAT+AGG - Chr7:12068985-12069004 None:intergenic 35.0%
CTATTGGGATTTCATGGTTT+AGG + Chr7:12068983-12069002 MsG0780036696.01.T01:intron 35.0%
CTCTCATCCTTTGAATATAG+TGG + Chr7:12065595-12065614 MsG0780036696.01.T01:CDS 35.0%
CTGAAAATTCGCATTCGTAT+CGG + Chr7:12069027-12069046 MsG0780036696.01.T01:intron 35.0%
CTGAACATGTGTTATAAGTC+GGG + Chr7:12073897-12073916 MsG0780036696.01.T01:intron 35.0%
CTGCTTCCATTCGAATATAT+AGG + Chr7:12065887-12065906 MsG0780036696.01.T01:intron 35.0%
CTTTAAGCACCTCATGAATA+AGG - Chr7:12067696-12067715 None:intergenic 35.0%
GAACATGTGTTTATAAGTCG+GGG + Chr7:12067289-12067308 MsG0780036696.01.T01:intron 35.0%
GAATAGCAGTTCAATACGTT+TGG - Chr7:12064863-12064882 None:intergenic 35.0%
GATAAACATTGGAAGTTAGG+TGG + Chr7:12067798-12067817 MsG0780036696.01.T01:intron 35.0%
GATTACAAAACAACAGATCC+AGG - Chr7:12070199-12070218 None:intergenic 35.0%
GATTTCCAAAGGAATTGCTA+AGG + Chr7:12064834-12064853 MsG0780036696.01.T01:CDS 35.0%
GCAATGAAACAGTAATGTGA+AGG - Chr7:12066552-12066571 None:intergenic 35.0%
GGAAATTTACTCGGATAGAA+TGG - Chr7:12071386-12071405 None:intergenic 35.0%
GTGAATCAAGATATGTTTCG+GGG + Chr7:12065054-12065073 MsG0780036696.01.T01:CDS 35.0%
TAAAAGTGGAGGGAGAATTT+AGG - Chr7:12068535-12068554 None:intergenic 35.0%
TAAAGCTCCAAGGTTATTGA+AGG + Chr7:12065639-12065658 MsG0780036696.01.T01:CDS 35.0%
TACTGAAAGGATGAGAGATT+TGG - Chr7:12065234-12065253 None:intergenic 35.0%
TATCGCCATATCCAAACAAA+AGG + Chr7:12068253-12068272 MsG0780036696.01.T01:intron 35.0%
TCCAAACAAAAGGGGATTAA+AGG + Chr7:12068263-12068282 MsG0780036696.01.T01:intron 35.0%
TCTCAGAAAACTTTCTCTGA+CGG + Chr7:12067041-12067060 MsG0780036696.01.T01:CDS 35.0%
TGAAATTCTCAATCCCAACA+TGG + Chr7:12073211-12073230 MsG0780036696.01.T01:intron 35.0%
TGAACATGTGTTATAAGTCG+GGG + Chr7:12073898-12073917 MsG0780036696.01.T01:intron 35.0%
TGAATATAGTGGCTACACAA+GGG + Chr7:12065606-12065625 MsG0780036696.01.T01:CDS 35.0%
TGACTTCTAGATCCAAAACT+CGG + Chr7:12070117-12070136 MsG0780036696.01.T01:intron 35.0%
TGAGAAGGATGTGTTAAAAG+TGG - Chr7:12068549-12068568 None:intergenic 35.0%
TGATCGTAACCTTATTCATG+AGG + Chr7:12067684-12067703 MsG0780036696.01.T01:CDS 35.0%
TGCGATAAACATTGGAAGTT+AGG + Chr7:12067795-12067814 MsG0780036696.01.T01:intron 35.0%
TGTGTAGCCACTATATTCAA+AGG - Chr7:12065605-12065624 None:intergenic 35.0%
TTCTTCCTATTGGGATTTCA+TGG + Chr7:12068977-12068996 MsG0780036696.01.T01:intron 35.0%
TTGAAATATGTCGAGTTACG+TGG + Chr7:12067517-12067536 MsG0780036696.01.T01:CDS 35.0%
TTGAATATAGTGGCTACACA+AGG + Chr7:12065605-12065624 MsG0780036696.01.T01:CDS 35.0%
TTTATCTCGAAAAGAAGGCT+TGG + Chr7:12069399-12069418 MsG0780036696.01.T01:intron 35.0%
! AAAATTTGCATCTGGATTGG+GGG - Chr7:12066337-12066356 None:intergenic 35.0%
! AATCCTTTTCAAATCCATGC+GGG + Chr7:12070215-12070234 MsG0780036696.01.T01:intron 35.0%
! ATTTTCAATGACGCAGCTTT+CGG - Chr7:12065517-12065536 None:intergenic 35.0%
! CACAATTCTTGGAAGGTTTT+GGG + Chr7:12069260-12069279 MsG0780036696.01.T01:intron 35.0%
! CACATGTGTTTGTTACACAA+GGG - Chr7:12069915-12069934 None:intergenic 35.0%
! CGAATGCGAATTTTCAGAAT+TGG - Chr7:12069024-12069043 None:intergenic 35.0%
! GCTAACTGTTTCTTCCTATT+GGG + Chr7:12068968-12068987 MsG0780036696.01.T01:intron 35.0%
! GTTGTTGTTGTAAGTTGAAC+CGG - Chr7:12068831-12068850 None:intergenic 35.0%
! TCACATGTGTTTGTTACACA+AGG - Chr7:12069916-12069935 None:intergenic 35.0%
! TCCTTTAATCCCCTTTTGTT+TGG - Chr7:12068267-12068286 None:intergenic 35.0%
! TCTATCCTCTCTTTTGCTTT+TGG - Chr7:12067940-12067959 None:intergenic 35.0%
! TTGTCCAAATTTAGCTTCAC+CGG + Chr7:12065303-12065322 MsG0780036696.01.T01:intron 35.0%
! TTTAAACCGGTTGGATTTTC+TGG + Chr7:12071950-12071969 MsG0780036696.01.T01:CDS 35.0%
! TTTTCAAATGACGCAGCTTT+CGG - Chr7:12072123-12072142 None:intergenic 35.0%
!! AAGAGTTGGTATATGTCTGA+TGG + Chr7:12067370-12067389 MsG0780036696.01.T01:intron 35.0%
!! AATCCCCTTTTGTTTGGATA+TGG - Chr7:12068261-12068280 None:intergenic 35.0%
!! ATATCCTCTTTTTCACGGAT+TGG + Chr7:12069352-12069371 MsG0780036696.01.T01:intron 35.0%
!! CAATACAGCTTTGAAATGTG+GGG + Chr7:12070677-12070696 MsG0780036696.01.T01:intron 35.0%
!! CAGCCATGATTTTTAAGAGT+TGG + Chr7:12067356-12067375 MsG0780036696.01.T01:intron 35.0%
!! CAGTGAGTGAAGTTTTATGT+TGG - Chr7:12068735-12068754 None:intergenic 35.0%
!! CCGAGTTCGTTTTATTAAAC+CGG + Chr7:12068809-12068828 MsG0780036696.01.T01:intron 35.0%
!! GCAATACAGCTTTGAAATGT+GGG + Chr7:12070676-12070695 MsG0780036696.01.T01:intron 35.0%
!! TGAGGTTTTAGTCCATCTTT+CGG - Chr7:12067650-12067669 None:intergenic 35.0%
!! TGAGTGAAGTTTTATGTTGG+TGG - Chr7:12068732-12068751 None:intergenic 35.0%
!! TGCAATACAGCTTTGAAATG+TGG + Chr7:12070675-12070694 MsG0780036696.01.T01:intron 35.0%
!! TTCACGGATTGGTATTTCTT+GGG + Chr7:12069363-12069382 MsG0780036696.01.T01:intron 35.0%
!! TTTCACGGATTGGTATTTCT+TGG + Chr7:12069362-12069381 MsG0780036696.01.T01:intron 35.0%
!! TTTGAAAGTATCGATCCACA+GGG - Chr7:12069087-12069106 None:intergenic 35.0%
!!! GGTTTTTTGGAATGCAACTA+AGG + Chr7:12065660-12065679 MsG0780036696.01.T01:CDS 35.0%
!!! TGCAACAAAGTGATGGATTT+TGG + Chr7:12066572-12066591 MsG0780036696.01.T01:intron 35.0%
!!! TGCCATTTTCTAGCTCAATT+CGG + Chr7:12069312-12069331 MsG0780036696.01.T01:intron 35.0%
!!! TGTTTTGGAGATCAAAGTTG+AGG - Chr7:12071247-12071266 None:intergenic 35.0%
!!! TTTTATGTTGGTGGTTGCTA+AGG - Chr7:12068723-12068742 None:intergenic 35.0%
!!! TTTTGAAAGTATCGATCCAC+AGG - Chr7:12069088-12069107 None:intergenic 35.0%
AAACAATGGCTTCACGAATG+GGG + Chr7:12071209-12071228 MsG0780036696.01.T01:intron 40.0%
AAACGCCTAACAAACACAGA+GGG + Chr7:12066440-12066459 MsG0780036696.01.T01:intron 40.0%
AACGGAAACAACCCTAACAT+CGG - Chr7:12068883-12068902 None:intergenic 40.0%
ACAGATAGCGAACTTAACGA+AGG + Chr7:12066909-12066928 MsG0780036696.01.T01:intron 40.0%
ACCAATAGCATCCGCTATTT+GGG + Chr7:12070457-12070476 MsG0780036696.01.T01:intron 40.0%
ACCGTGAATTGTTGAAGAAC+CGG - Chr7:12068768-12068787 None:intergenic 40.0%
ACTCGGATAGAATGGATCAT+GGG - Chr7:12064769-12064788 None:intergenic 40.0%
ACTTACGGATTCACCTATCA+GGG + Chr7:12069234-12069253 MsG0780036696.01.T01:intron 40.0%
AGAATTTAACCAACTCCCTG+TGG + Chr7:12069069-12069088 MsG0780036696.01.T01:intron 40.0%
AGAGAATTAAGGTCTAACGG+TGG + Chr7:12070608-12070627 MsG0780036696.01.T01:intron 40.0%
AGTGAGTGAAAGATCCATTG+CGG - Chr7:12068654-12068673 None:intergenic 40.0%
AGTTAGCCAGTCATCTATTG+AGG + Chr7:12067566-12067585 MsG0780036696.01.T01:CDS 40.0%
ATTCCCGCATGGATTTGAAA+AGG - Chr7:12070221-12070240 None:intergenic 40.0%
ATTGCACCAAAGAGATGATG+TGG - Chr7:12065697-12065716 None:intergenic 40.0%
CACATTCCTCAATAGATGAC+TGG - Chr7:12067575-12067594 None:intergenic 40.0%
CATAGGCAAAGAAGAGAACA+TGG + Chr7:12067475-12067494 MsG0780036696.01.T01:CDS 40.0%
CCGACTTATAACACATGTTC+AGG - Chr7:12073899-12073918 None:intergenic 40.0%
CGTACACTTGTGTTTGTTTC+TGG - Chr7:12069861-12069880 None:intergenic 40.0%
CTAGAAGTCAGTTGTGTTCT+GGG - Chr7:12070107-12070126 None:intergenic 40.0%
CTAGCACATTGTCGAAACAA+TGG + Chr7:12071195-12071214 MsG0780036696.01.T01:intron 40.0%
CTGAATTCTCAATCCCAACA+TGG + Chr7:12066601-12066620 MsG0780036696.01.T01:intron 40.0%
GAAACAATGGCTTCACGAAT+GGG + Chr7:12071208-12071227 MsG0780036696.01.T01:intron 40.0%
GAACATGTGTTATAAGTCGG+GGG + Chr7:12073899-12073918 MsG0780036696.01.T01:intron 40.0%
GAAGGATGTGTTAAAAGTGG+AGG - Chr7:12068546-12068565 None:intergenic 40.0%
GATGGATGCAGTTGGAAAAT+AGG - Chr7:12065080-12065099 None:intergenic 40.0%
GCAACAACAGTTATCTCATC+TGG - Chr7:12065568-12065587 None:intergenic 40.0%
GTCCGAATTGAGCTAGAAAA+TGG - Chr7:12069317-12069336 None:intergenic 40.0%
GTGACAACAATTGTGTTGGA+TGG + Chr7:12065377-12065396 MsG0780036696.01.T01:intron 40.0%
GTGTACGGTTAACTATCATC+GGG + Chr7:12069874-12069893 MsG0780036696.01.T01:intron 40.0%
GTGTCAGATAAGAGAGCAAA+GGG - Chr7:12064931-12064950 None:intergenic 40.0%
TAACGGTGGATCTGAATACA+AGG + Chr7:12070622-12070641 MsG0780036696.01.T01:intron 40.0%
TACTCGGATAGAATGGATCA+TGG - Chr7:12064770-12064789 None:intergenic 40.0%
TATGATCATGATGCCTTCAC+AGG + Chr7:12065747-12065766 MsG0780036696.01.T01:CDS 40.0%
TCATAGCATAAATTCCCGCA+TGG - Chr7:12070232-12070251 None:intergenic 40.0%
TCATTGCTGCAACAAAGTGA+TGG + Chr7:12066565-12066584 MsG0780036696.01.T01:intron 40.0%
TCCATTAGGTGACCAACATA+GGG + Chr7:12064795-12064814 MsG0780036696.01.T01:CDS 40.0%
TCGCCATATCCAAACAAAAG+GGG + Chr7:12068255-12068274 MsG0780036696.01.T01:intron 40.0%
TCTAGAAGTCAGTTGTGTTC+TGG - Chr7:12070108-12070127 None:intergenic 40.0%
TCTTTCCCTCTGTGTTTGTT+AGG - Chr7:12066448-12066467 None:intergenic 40.0%
TGAATTGTTGAAGAACCGGT+GGG - Chr7:12068764-12068783 None:intergenic 40.0%
TGTACGGTTAACTATCATCG+GGG + Chr7:12069875-12069894 MsG0780036696.01.T01:intron 40.0%
TGTCAATGACATCCCTATGT+TGG - Chr7:12064810-12064829 None:intergenic 40.0%
TGTGTCAGATAAGAGAGCAA+AGG - Chr7:12064932-12064951 None:intergenic 40.0%
TGTTAGGCGTTTGTAGGTAA+TGG - Chr7:12066432-12066451 None:intergenic 40.0%
TTCCATTAGGTGACCAACAT+AGG + Chr7:12064794-12064813 MsG0780036696.01.T01:CDS 40.0%
TTGAATCCAGAGAAGTCCAT+TGG - Chr7:12065000-12065019 None:intergenic 40.0%
TTGTCCCAAAATCGACATAG+TGG + Chr7:12065847-12065866 MsG0780036696.01.T01:intron 40.0%
TTGTTTCCGGTTAGATCTGT+AGG + Chr7:12070539-12070558 MsG0780036696.01.T01:intron 40.0%
! AAAGAAGGCTTGGTTATCGT+TGG + Chr7:12069409-12069428 MsG0780036696.01.T01:intron 40.0%
! ACCGGTTCTTCAACAATTCA+CGG + Chr7:12068764-12068783 MsG0780036696.01.T01:intron 40.0%
! AGAATCGGAAGTCTAGAGTT+GGG + Chr7:12066469-12066488 MsG0780036696.01.T01:intron 40.0%
! GACAAGTTTTGCAACGATGT+AGG - Chr7:12068699-12068718 None:intergenic 40.0%
! GCACAATTCTTGGAAGGTTT+TGG + Chr7:12069259-12069278 MsG0780036696.01.T01:intron 40.0%
! GGCTAACTGTTTCTTCCTAT+TGG + Chr7:12068967-12068986 MsG0780036696.01.T01:intron 40.0%
! GTGTCCAAATTTAGCTTCAC+CGG + Chr7:12071908-12071927 MsG0780036696.01.T01:intron 40.0%
! TAACTGTGGGATTAGCATTC+AGG + Chr7:12065182-12065201 MsG0780036696.01.T01:intron 40.0%
! TGTGTTTGTTAGGCGTTTGT+AGG - Chr7:12066438-12066457 None:intergenic 40.0%
!! AACGACTGTGTTTGGGTTTT+TGG + Chr7:12070513-12070532 MsG0780036696.01.T01:intron 40.0%
!! ACACTTGTGTTTGTTTCTGG+TGG - Chr7:12069858-12069877 None:intergenic 40.0%
!! CACTTGTGTTTGTTTCTGGT+GGG - Chr7:12069857-12069876 None:intergenic 40.0%
!! CTTGGTTATCGTTGGCTTAT+GGG + Chr7:12069417-12069436 MsG0780036696.01.T01:intron 40.0%
!! TCTATATAGGTGCCGAAAGA+TGG + Chr7:12067635-12067654 MsG0780036696.01.T01:CDS 40.0%
!! TGGGTTCTAGGTAAACCTAT+GGG + Chr7:12069279-12069298 MsG0780036696.01.T01:intron 40.0%
!! TTGGGTTCTAGGTAAACCTA+TGG + Chr7:12069278-12069297 MsG0780036696.01.T01:intron 40.0%
!! TTGGTTATCGTTGGCTTATG+GGG + Chr7:12069418-12069437 MsG0780036696.01.T01:intron 40.0%
!! TTTTCTGCTATTGGTTGCCT+TGG + Chr7:12066818-12066837 MsG0780036696.01.T01:intron 40.0%
AACATGGCAATACAACCGAG+TGG + Chr7:12066617-12066636 MsG0780036696.01.T01:intron 45.0%
AAGAAACAGTTAGCCGACCT+AGG - Chr7:12068962-12068981 None:intergenic 45.0%
AAGAATTGTGCACCCCTGAT+AGG - Chr7:12069250-12069269 None:intergenic 45.0%
ACGACCGGTGAAGCTAAATT+TGG - Chr7:12065310-12065329 None:intergenic 45.0%
ACTCGGTTGTATTGCCATGT+TGG - Chr7:12066618-12066637 None:intergenic 45.0%
AGAAACAGTTAGCCGACCTA+GGG - Chr7:12068961-12068980 None:intergenic 45.0%
AGAGGCAAAACGACTGTGTT+TGG + Chr7:12070505-12070524 MsG0780036696.01.T01:intron 45.0%
AGCGAACTTAACGAAGGTCT+TGG + Chr7:12066915-12066934 MsG0780036696.01.T01:CDS 45.0%
AGGTCATCGTTTATCCGAAG+TGG - Chr7:12067269-12067288 None:intergenic 45.0%
AGTATCAATCCACAGGGAGT+TGG - Chr7:12069187-12069206 None:intergenic 45.0%
ATAGCATCCGCTATTTGGGT+CGG + Chr7:12070461-12070480 MsG0780036696.01.T01:intron 45.0%
ATGTTACGCGCCACTATCAA+AGG - Chr7:12065826-12065845 None:intergenic 45.0%
CAAACGCCTAACAAACACAG+AGG + Chr7:12066439-12066458 MsG0780036696.01.T01:intron 45.0%
CAAGGGTGAAGTCTACAAGA+TGG - Chr7:12065098-12065117 None:intergenic 45.0%
CACAGAGGGAAAGAGAGAAT+CGG + Chr7:12066454-12066473 MsG0780036696.01.T01:intron 45.0%
CACATGTGGATGGATCTCAT+AGG + Chr7:12067458-12067477 MsG0780036696.01.T01:CDS 45.0%
CACTTACGGATTCACCTATC+AGG + Chr7:12069233-12069252 MsG0780036696.01.T01:intron 45.0%
CGAAACAATGGCTTCACGAA+TGG + Chr7:12071207-12071226 MsG0780036696.01.T01:intron 45.0%
CTAAAGTCCGTTCATCTACC+CGG + Chr7:12070167-12070186 MsG0780036696.01.T01:intron 45.0%
CTAACAGAACCCCACAAAAC+TGG - Chr7:12067333-12067352 None:intergenic 45.0%
CTCGGTTGTATTGCCATGTT+GGG - Chr7:12066617-12066636 None:intergenic 45.0%
CTCTCTCCTACAGATCTAAC+CGG - Chr7:12070548-12070567 None:intergenic 45.0%
CTTACGGATTCACCTATCAG+GGG + Chr7:12069235-12069254 MsG0780036696.01.T01:intron 45.0%
GACCAATAGCATCCGCTATT+TGG + Chr7:12070456-12070475 MsG0780036696.01.T01:intron 45.0%
GAGGCAAAACGACTGTGTTT+GGG + Chr7:12070506-12070525 MsG0780036696.01.T01:intron 45.0%
GGCTAACTCAATCACATCCA+TGG - Chr7:12067554-12067573 None:intergenic 45.0%
GGTGGATCTGAATACAAGGT+GGG + Chr7:12070626-12070645 MsG0780036696.01.T01:intron 45.0%
GTACGGTTAACTATCATCGG+GGG + Chr7:12069876-12069895 MsG0780036696.01.T01:intron 45.0%
GTCTACAAGATGGATGCAGT+TGG - Chr7:12065088-12065107 None:intergenic 45.0%
GTGAATTGTTGAAGAACCGG+TGG - Chr7:12068765-12068784 None:intergenic 45.0%
TAACAGAACCCCCACAAAAC+TGG - Chr7:12073942-12073961 None:intergenic 45.0%
TAGAATGGATCATGGGACCT+TGG - Chr7:12064762-12064781 None:intergenic 45.0%
TAGGTGAATCCGTAAGTGCA+CGG - Chr7:12069231-12069250 None:intergenic 45.0%
TATGGAGCTTGTAACCGCAA+TGG + Chr7:12068637-12068656 MsG0780036696.01.T01:intron 45.0%
TCCCTATGTTGGTCACCTAA+TGG - Chr7:12064799-12064818 None:intergenic 45.0%
TTCTCGACATGACGTGATCT+TGG - Chr7:12065721-12065740 None:intergenic 45.0%
! AATGTCTGGGGTGATGATAC+TGG + Chr7:12066641-12066660 MsG0780036696.01.T01:intron 45.0%
! ATGTCTGGGGTGATGATACT+GGG + Chr7:12066642-12066661 MsG0780036696.01.T01:intron 45.0%
! GAGAATCGGAAGTCTAGAGT+TGG + Chr7:12066468-12066487 MsG0780036696.01.T01:intron 45.0%
! GTGGGATTAGCATTCAGGAT+AGG + Chr7:12065187-12065206 MsG0780036696.01.T01:intron 45.0%
! GTTCTAGGTAAACCTATGGG+AGG + Chr7:12069282-12069301 MsG0780036696.01.T01:intron 45.0%
! TATCAGGGGTGCACAATTCT+TGG + Chr7:12069249-12069268 MsG0780036696.01.T01:intron 45.0%
! TGAAGCTTCGTTCCGAGTTT+TGG - Chr7:12070132-12070151 None:intergenic 45.0%
! TTCGCATTCGTATCGGTAGA+AGG + Chr7:12069034-12069053 MsG0780036696.01.T01:intron 45.0%
! TTTGACTGACTCACCTGTGA+AGG - Chr7:12065763-12065782 None:intergenic 45.0%
!! ACCCAAATAGCGGATGCTAT+TGG - Chr7:12070461-12070480 None:intergenic 45.0%
!! ACCGCACAATCCAGTTTTGT+GGG + Chr7:12067320-12067339 MsG0780036696.01.T01:intron 45.0%
!! AGAAGTCCATTGGTGCTACT+AGG - Chr7:12064990-12065009 None:intergenic 45.0%
!! AGTTTTGTGGGGGTTCTGTT+AGG + Chr7:12073941-12073960 MsG0780036696.01.T01:intron 45.0%
!! ATCGAGAGGCTTGATAGTGA+CGG - Chr7:12070062-12070081 None:intergenic 45.0%
!! CAGTTTTGTGGGGTTCTGTT+AGG + Chr7:12067331-12067350 MsG0780036696.01.T01:intron 45.0%
!! CTACTAGGAGGCATTTCTCT+AGG - Chr7:12064975-12064994 None:intergenic 45.0%
!! GACTGTGTTTGGGTTTTTGG+AGG + Chr7:12070516-12070535 MsG0780036696.01.T01:intron 45.0%
!! GCTTGGTTATCGTTGGCTTA+TGG + Chr7:12069416-12069435 MsG0780036696.01.T01:intron 45.0%
!! GGGAGCATCTGATCCTAATA+TGG + Chr7:12066978-12066997 MsG0780036696.01.T01:CDS 45.0%
!! GGGTTTTTGGAGGTTGTTTC+CGG + Chr7:12070526-12070545 MsG0780036696.01.T01:intron 45.0%
!! TGGTTATCGTTGGCTTATGG+GGG + Chr7:12069419-12069438 MsG0780036696.01.T01:intron 45.0%
!!! CTTGGAAGGTTTTGGGTTCT+AGG + Chr7:12069267-12069286 MsG0780036696.01.T01:intron 45.0%
!!! ATACTATTTATTTATTTTTT+TGG - Chr7:12067899-12067918 None:intergenic 5.0%
!!! TTTAGTTATTTTATTTATAA+TGG + Chr7:12074455-12074474 MsG0780036696.01.T01:three_prime_UTR 5.0%
AACAGATCCAGGCACTTACC+GGG - Chr7:12070188-12070207 None:intergenic 50.0%
ACAACCGAGTGGCAATGTCT+GGG + Chr7:12066628-12066647 MsG0780036696.01.T01:intron 50.0%
ACGTGGTTGTGTTTGCACCA+TGG + Chr7:12067534-12067553 MsG0780036696.01.T01:CDS 50.0%
AGATCTGTAGGAGAGAGACG+AGG + Chr7:12070551-12070570 MsG0780036696.01.T01:intron 50.0%
AGCGGTAAACCGTGCACTTA+CGG + Chr7:12069219-12069238 MsG0780036696.01.T01:intron 50.0%
ATGCCTCCTAGTAGCACCAA+TGG + Chr7:12064981-12065000 MsG0780036696.01.T01:CDS 50.0%
ATTGTTGAAGAACCGGTGGG+TGG - Chr7:12068761-12068780 None:intergenic 50.0%
CAACAGATCCAGGCACTTAC+CGG - Chr7:12070189-12070208 None:intergenic 50.0%
CCCCACAAAACTGGATTGTG+CGG - Chr7:12067324-12067343 None:intergenic 50.0%
CGAACTCGGCTTTCAGTTTG+AGG - Chr7:12068798-12068817 None:intergenic 50.0%
CGGTGGATCTGAATACAAGG+TGG + Chr7:12070625-12070644 MsG0780036696.01.T01:intron 50.0%
GCACTTACCGGGTAGATGAA+CGG - Chr7:12070177-12070196 None:intergenic 50.0%
GCTTGGATGGATGGAGAGTT+AGG - Chr7:12070040-12070059 None:intergenic 50.0%
GGCACCCTTAGCAATTCCTT+TGG - Chr7:12064842-12064861 None:intergenic 50.0%
GGTAAACCTATGGGAGGAGT+CGG + Chr7:12069288-12069307 MsG0780036696.01.T01:intron 50.0%
TACAACCGAGTGGCAATGTC+TGG + Chr7:12066627-12066646 MsG0780036696.01.T01:intron 50.0%
TCAGAGAGAGAGAGAGAGAG+AGG + Chr7:12070487-12070506 MsG0780036696.01.T01:intron 50.0%
TGAAGGTGACGTCCTCAAGT+TGG - Chr7:12065457-12065476 None:intergenic 50.0%
! AGGGGTGCACAATTCTTGGA+AGG + Chr7:12069253-12069272 MsG0780036696.01.T01:intron 50.0%
! ATAGTGACGGCTTGGATGGA+TGG - Chr7:12070049-12070068 None:intergenic 50.0%
! CACCGCACAATCCAGTTTTG+TGG + Chr7:12067319-12067338 MsG0780036696.01.T01:intron 50.0%
! GTAGCACCAATGGACTTCTC+TGG + Chr7:12064991-12065010 MsG0780036696.01.T01:CDS 50.0%
! TGCATCTGGATTGGGGGTTA+AGG - Chr7:12072943-12072962 None:intergenic 50.0%
! TTGCATCTGGATTGGGGGTA+AGG - Chr7:12066332-12066351 None:intergenic 50.0%
!! AGTATCGATCCACAGGGAGT+TGG - Chr7:12069081-12069100 None:intergenic 50.0%
!! AGTCCATTGGTGCTACTAGG+AGG - Chr7:12064987-12065006 None:intergenic 50.0%
!! CCGCACAATCCAGTTTTGTG+GGG + Chr7:12067321-12067340 MsG0780036696.01.T01:intron 50.0%
!! CGCACAATCCAGTTTTGTGG+GGG + Chr7:12067322-12067341 MsG0780036696.01.T01:intron 50.0%
!! CTTGATAGTGACGGCTTGGA+TGG - Chr7:12070053-12070072 None:intergenic 50.0%
!! TATCGTTGGCTTATGGGGGT+CGG + Chr7:12069423-12069442 MsG0780036696.01.T01:intron 50.0%
!! TTCAGAGAACGCTGGTTTCG+CGG + Chr7:12070416-12070435 MsG0780036696.01.T01:intron 50.0%
AAGAAAATAGCGGCCGCTCC+CGG + Chr7:12070330-12070349 MsG0780036696.01.T01:intron 55.0%
AGAAGCTCGACGTACACCCT+AGG + Chr7:12068942-12068961 MsG0780036696.01.T01:intron 55.0%
CAACCGAGTGGCAATGTCTG+GGG + Chr7:12066629-12066648 MsG0780036696.01.T01:intron 55.0%
CGTGTGCAGCAGCAATGAAG+AGG + Chr7:12071090-12071109 MsG0780036696.01.T01:intron 55.0%
CTGAGCTCCGACCCAAATAG+CGG - Chr7:12070471-12070490 None:intergenic 55.0%
CTTCTGGTGACCTTTGCCAG+TGG - Chr7:12068927-12068946 None:intergenic 55.0%
GGCTTCACGAATGGGGTTTC+AGG + Chr7:12071216-12071235 MsG0780036696.01.T01:intron 55.0%
TAGGGTGTACGTCGAGCTTC+TGG - Chr7:12068943-12068962 None:intergenic 55.0%
TCACCCCAGACATTGCCACT+CGG - Chr7:12066635-12066654 None:intergenic 55.0%
TCATCTACCCGGTAAGTGCC+TGG + Chr7:12070178-12070197 MsG0780036696.01.T01:intron 55.0%
TCTGTAGGAGAGAGACGAGG+AGG + Chr7:12070554-12070573 MsG0780036696.01.T01:intron 55.0%
TTCCGTTTCCAACGTCGTCG+CGG + Chr7:12068896-12068915 MsG0780036696.01.T01:intron 55.0%
!! ATCGTTGGCTTATGGGGGTC+GGG + Chr7:12069424-12069443 MsG0780036696.01.T01:intron 55.0%
!! CAGTTGTGTTCTGGGACGAG+AGG - Chr7:12070099-12070118 None:intergenic 55.0%
!! GAGGCTTGATAGTGACGGCT+TGG - Chr7:12070057-12070076 None:intergenic 55.0%
!! TGTGTTCTGGGACGAGAGGA+CGG - Chr7:12070095-12070114 None:intergenic 55.0%
ACGGGAAGCTGAGGATCGAG+AGG - Chr7:12070076-12070095 None:intergenic 60.0%
CACTCACTGCAACCACCCAC+CGG + Chr7:12068746-12068765 MsG0780036696.01.T01:intron 60.0%
CTCCGCGACGACGTTGGAAA+CGG - Chr7:12068901-12068920 None:intergenic 60.0%
GCTCGACGTACACCCTAGGT+CGG + Chr7:12068946-12068965 MsG0780036696.01.T01:intron 60.0%
TATTGGTCCGCACCGCTCCA+CGG - Chr7:12070444-12070463 None:intergenic 60.0%
! TGGCAACCGACTCCTCCCAT+AGG - Chr7:12069297-12069316 None:intergenic 60.0%
!! GTGTTCTGGGACGAGAGGAC+GGG - Chr7:12070094-12070113 None:intergenic 60.0%
CGCGGAGTTGCCACTGGCAA+AGG + Chr7:12068914-12068933 MsG0780036696.01.T01:intron 65.0%
CGTTCTCTGAATGCGCCGCG+CGG - Chr7:12070407-12070426 None:intergenic 65.0%
GACGAGAGGACGGGAAGCTG+AGG - Chr7:12070085-12070104 None:intergenic 65.0%
GCGGCGCATTCAGAGAACGC+TGG + Chr7:12070408-12070427 MsG0780036696.01.T01:intron 65.0%
GGTTTCGCGGAACCGTGGAG+CGG + Chr7:12070429-12070448 MsG0780036696.01.T01:intron 65.0%
GTTCTCTGAATGCGCCGCGC+GGG - Chr7:12070406-12070425 None:intergenic 65.0%
TGGCAACTCCGCGACGACGT+TGG - Chr7:12068907-12068926 None:intergenic 65.0%
TTCTCTGAATGCGCCGCGCG+GGG - Chr7:12070405-12070424 None:intergenic 65.0%
! GTTGGCTTATGGGGGTCGGG+TGG + Chr7:12069427-12069446 MsG0780036696.01.T01:intron 65.0%
!! ACGCTGGTTTCGCGGAACCG+TGG + Chr7:12070424-12070443 MsG0780036696.01.T01:intron 65.0%
CGTCGTCGCGGAGTTGCCAC+TGG + Chr7:12068908-12068927 MsG0780036696.01.T01:intron 70.0%
CTCCACGCTGCGATAGCGCC+GGG - Chr7:12070351-12070370 None:intergenic 70.0%
GCTCCACGCTGCGATAGCGC+CGG - Chr7:12070352-12070371 None:intergenic 70.0%
GGCGCTATCGCAGCGTGGAG+CGG + Chr7:12070351-12070370 MsG0780036696.01.T01:intron 70.0%
TCTCTGAATGCGCCGCGCGG+GGG - Chr7:12070404-12070423 None:intergenic 70.0%
CGCGGAACCGTGGAGCGGTG+CGG + Chr7:12070434-12070453 MsG0780036696.01.T01:intron 75.0%
CTCCCGGCGCTATCGCAGCG+TGG + Chr7:12070346-12070365 MsG0780036696.01.T01:intron 75.0%
! CGCTGCGATAGCGCCGGGAG+CGG - Chr7:12070346-12070365 None:intergenic 75.0%
! CGCGTCACAGCGCCCCCGCG+CGG + Chr7:12070389-12070408 MsG0780036696.01.T01:intron 85.0%
!!! CGCGCGGGGGCGCTGTGACG+CGG - Chr7:12070391-12070410 None:intergenic 85.0%
!!! GCGGGGGCGCTGTGACGCGG+CGG - Chr7:12070388-12070407 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 12064751 12074521 12064751 ID=MsG0780036696.01;Name=MsG0780036696.01
Chr7 mRNA 12064751 12074521 12064751 ID=MsG0780036696.01.T01;Parent=MsG0780036696.01;Name=MsG0780036696.01.T01;_AED=0.32;_eAED=0.32;_QI=0|0.66|0.42|1|1|1|7|159|661
Chr7 exon 12064751 12065123 12064751 ID=MsG0780036696.01.T01:exon:2436;Parent=MsG0780036696.01.T01
Chr7 exon 12065521 12065768 12065521 ID=MsG0780036696.01.T01:exon:2437;Parent=MsG0780036696.01.T01
Chr7 exon 12066913 12067062 12066913 ID=MsG0780036696.01.T01:exon:2438;Parent=MsG0780036696.01.T01
Chr7 exon 12067448 12067752 12067448 ID=MsG0780036696.01.T01:exon:2439;Parent=MsG0780036696.01.T01
Chr7 exon 12071922 12072375 12071922 ID=MsG0780036696.01.T01:exon:2440;Parent=MsG0780036696.01.T01
Chr7 exon 12073521 12073670 12073521 ID=MsG0780036696.01.T01:exon:2441;Parent=MsG0780036696.01.T01
Chr7 exon 12074057 12074521 12074057 ID=MsG0780036696.01.T01:exon:2442;Parent=MsG0780036696.01.T01
Chr7 CDS 12064751 12065123 12064751 ID=MsG0780036696.01.T01:cds;Parent=MsG0780036696.01.T01
Chr7 CDS 12065521 12065768 12065521 ID=MsG0780036696.01.T01:cds;Parent=MsG0780036696.01.T01
Chr7 CDS 12066913 12067062 12066913 ID=MsG0780036696.01.T01:cds;Parent=MsG0780036696.01.T01
Chr7 CDS 12067448 12067752 12067448 ID=MsG0780036696.01.T01:cds;Parent=MsG0780036696.01.T01
Chr7 CDS 12071922 12072375 12071922 ID=MsG0780036696.01.T01:cds;Parent=MsG0780036696.01.T01
Chr7 CDS 12073521 12073670 12073521 ID=MsG0780036696.01.T01:cds;Parent=MsG0780036696.01.T01
Chr7 CDS 12074057 12074362 12074057 ID=MsG0780036696.01.T01:cds;Parent=MsG0780036696.01.T01
Chr7 three_prime_UTR 12074363 12074521 12074363 ID=MsG0780036696.01.T01:three_prime_utr;Parent=MsG0780036696.01.T01
Gene Sequence

>MsG0780036696.01.T01

ATGCATTACCAAGGTCCCATGATCCATTCTATCCGAGTAAATTTTCCATTAGGTGACCAACATAGGGATGTCATTGACAAATTGATTTCCAAAGGAATTGCTAAGGGTGCCAAACGTATTGAACTGCTATTCTCGAATGAAACTGATTTTATTTTGGAAATTGAGCCATACAAATTTCCCTTTGCTCTCTTATCTGACACATACTCTCTCACACATCTGCACCTAGAGAAATGCCTCCTAGTAGCACCAATGGACTTCTCTGGATTCAAGAATTTGAGAACTCTTGTGTTGCATATAATTGATGTGAATCAAGATATGTTTCGGGGCCTATTTTCCAACTGCATCCATCTTGTAGACTTCACCCTTGATAACTCTGCGTCATTGAAAATAATTGACTGTGGCTATAAACTTCTCACTCCAGATGAGATAACTGTTGTTGCATTGAATCTCTCATCCTTTGAATATAGTGGCTACACAAGGGAACTTCATGTTAAAGCTCCAAGGTTATTGAAGGTTTTTTGGAATGCAACTAAGGAAGAAAGATATCCACATCATCTCTTTGGTGCAATTCCAAGATCACGTCATGTCGAGAATTTAGCTATGATCATGATGCCTTCACAGATAGCGAACTTAACGAAGGTCTTGGTTCAATTTCAAAACCTTCAACAATTGGAGTTATTAATCGAGGGAGCATCTGATCCTAATATGGACTACTTTTGGATTTTAGATATTATAATGGCTTCTCAGCATCTCAGAAAACTTTCTCTGACGATTAGAAATTCACATGTGGATGGATCTCATAGGCAAAGAAGAGAACATGGAAAGTTTTTTCATAATCATTTGAAATATGTCGAGTTACGTGGTTGTGTTTGCACCATGGATGTGATTGAGTTAGCCAGTCATCTATTGAGGAATGTGAATTCACTCAAGCAAATTACTTTCAGTTCTTGTGACAAATTCTATATAGGTGCCGAAAGATGGACTAAAACCTCAAAATATTGTTGCTATGATCGTAACCTTATTCATGAGGTGCTTAAAGATGAAGTAGATGAACAATGCCAACTTATAACTTTGTACTTCACCGGTCGTAAACTTTTTAGAATTTTTAAACCGGTTGGATTTTCTGGATTAAAAAATGTGACAACAATTGTGTTGGATGGACTTCATGAATGTTTATCTGAATTCATTGTGCCTGAGTTGTTTTCTAAATGTTACCAACTTGAGGACGTCACCTTCAAGAATTGCAGAATCATTCATAATTTGACTATTAAAAGCCGAAAGCTGCGTCATTTGAAAATAATTGACTGTGGCTATAAACTTCTCACTCCAGATGAGATAACTGTTGTTGCATTGAATCTCTCATCCTTTGAATATAGTGGCTACACAAGGGAACTTCATGTTAAAGCTCCAAGGTTATTGAAGGTTTTTTGGAATGCAACTAAGGAAGAAAGATATCCACATCATCTCTTTGGTGCAATTCCAAGATCACGTCATGTCGAGAATTTAGCTATGATCATGATGCCTTCACAGATAGCGAACTTAACGAAGGTCTTGGTTCAATTTCAAAACCTTCAACAATTGGAGTTATTAATCGAGGGAGCATCTGATCCTAATATGGACTACTTTTGGATTTTAGATATTATAATGGCTTCTCAGCATCTCAGAAAACTTTCTCTGACGATTAGAAATTCACATGTGGATGGATCTCATAGGCAAAGAAGAGAACATGGAAAGTTTTTTCATAATCATTTGAAATATGTCGAGTTACGTGGTTGTGTTTGCACCATGGATGTGATTGAGTTAGCCAGTCATCTATTGAGGAATGTGAATTCACTCAAGCAAATTACTTTCAGTTCTTGTGACAAATTCTATATAGGTGCCGAAAGATGGACTAAAACCTCAAAATATTGTTGCTATGATCGTAACCTTATTCATGAGGTGCTTAAAGATGAAGTAGATGAACAATGCCAACTTATAACTTTGTAG
Protein sequence

>MsG0780036696.01.T01

MHYQGPMIHSIRVNFPLGDQHRDVIDKLISKGIAKGAKRIELLFSNETDFILEIEPYKFPFALLSDTYSLTHLHLEKCLLVAPMDFSGFKNLRTLVLHIIDVNQDMFRGLFSNCIHLVDFTLDNSASLKIIDCGYKLLTPDEITVVALNLSSFEYSGYTRELHVKAPRLLKVFWNATKEERYPHHLFGAIPRSRHVENLAMIMMPSQIANLTKVLVQFQNLQQLELLIEGASDPNMDYFWILDIIMASQHLRKLSLTIRNSHVDGSHRQRREHGKFFHNHLKYVELRGCVCTMDVIELASHLLRNVNSLKQITFSSCDKFYIGAERWTKTSKYCCYDRNLIHEVLKDEVDEQCQLITLYFTGRKLFRIFKPVGFSGLKNVTTIVLDGLHECLSEFIVPELFSKCYQLEDVTFKNCRIIHNLTIKSRKLRHLKIIDCGYKLLTPDEITVVALNLSSFEYSGYTRELHVKAPRLLKVFWNATKEERYPHHLFGAIPRSRHVENLAMIMMPSQIANLTKVLVQFQNLQQLELLIEGASDPNMDYFWILDIIMASQHLRKLSLTIRNSHVDGSHRQRREHGKFFHNHLKYVELRGCVCTMDVIELASHLLRNVNSLKQITFSSCDKFYIGAERWTKTSKYCCYDRNLIHEVLKDEVDEQCQLITL*