Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036700.01.T01 | AES74809.1 | 92.699 | 589 | 35 | 3 | 7 | 590 | 55 | 640 | 0 | 1111 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036700.01.T01 | G7KLE6 | 92.699 | 589 | 35 | 3 | 7 | 590 | 55 | 640 | 0.0 | 1111 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0780036694.01 | MsG0780036700.01 | 0.969263 | 7.239966e-130 | 6.536425e-124 |
| MsG0780036695.01 | MsG0780036700.01 | 0.884348 | 2.070484e-71 | 1.361433e-67 |
| MsG0780036696.01 | MsG0780036700.01 | 0.873505 | 1.395861e-67 | 6.073573e-64 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036700.01.T01 | MTR_6g013380 | 92.699 | 589 | 35 | 3 | 7 | 590 | 55 | 640 | 0.0 | 1111 |
| MsG0780036700.01.T01 | MTR_6g013240 | 93.310 | 583 | 31 | 3 | 13 | 590 | 66 | 645 | 0.0 | 1107 |
| MsG0780036700.01.T01 | MTR_7g095350 | 63.265 | 588 | 202 | 6 | 8 | 587 | 3 | 584 | 0.0 | 724 |
| MsG0780036700.01.T01 | MTR_7g095350 | 63.574 | 582 | 198 | 6 | 14 | 587 | 1 | 576 | 0.0 | 721 |
| MsG0780036700.01.T01 | MTR_3g009910 | 58.717 | 608 | 212 | 11 | 14 | 589 | 3 | 603 | 0.0 | 682 |
| MsG0780036700.01.T01 | MTR_7g095560 | 56.414 | 608 | 227 | 9 | 14 | 590 | 3 | 603 | 0.0 | 654 |
| MsG0780036700.01.T01 | MTR_7g087840 | 55.462 | 595 | 241 | 11 | 14 | 590 | 1 | 589 | 0.0 | 585 |
| MsG0780036700.01.T01 | MTR_7g089610 | 59.432 | 493 | 177 | 11 | 13 | 494 | 36 | 516 | 0.0 | 540 |
| MsG0780036700.01.T01 | MTR_7g095350 | 60.762 | 446 | 163 | 5 | 8 | 447 | 3 | 442 | 0.0 | 520 |
| MsG0780036700.01.T01 | MTR_7g095350 | 61.136 | 440 | 159 | 5 | 14 | 447 | 1 | 434 | 2.18e-180 | 517 |
| MsG0780036700.01.T01 | MTR_7g092650 | 61.451 | 441 | 156 | 9 | 11 | 443 | 24 | 458 | 4.62e-180 | 516 |
| MsG0780036700.01.T01 | MTR_7g095350 | 61.663 | 433 | 154 | 5 | 14 | 440 | 1 | 427 | 1.99e-178 | 511 |
| MsG0780036700.01.T01 | MTR_3g009910 | 57.079 | 445 | 176 | 7 | 14 | 450 | 3 | 440 | 1.73e-171 | 494 |
| MsG0780036700.01.T01 | MTR_7g089620 | 58.482 | 448 | 167 | 9 | 12 | 448 | 12 | 451 | 9.71e-168 | 485 |
| MsG0780036700.01.T01 | MTR_7g087040 | 56.818 | 484 | 194 | 9 | 14 | 488 | 1 | 478 | 3.58e-162 | 488 |
| MsG0780036700.01.T01 | MTR_7g087040 | 52.326 | 430 | 191 | 8 | 168 | 590 | 514 | 936 | 1.43e-125 | 393 |
| MsG0780036700.01.T01 | MTR_7g089570 | 57.018 | 456 | 167 | 10 | 11 | 448 | 27 | 471 | 6.65e-162 | 471 |
| MsG0780036700.01.T01 | MTR_6g071510 | 48.270 | 578 | 241 | 13 | 14 | 579 | 1 | 532 | 2.46e-154 | 462 |
| MsG0780036700.01.T01 | MTR_0176s0050 | 52.018 | 446 | 198 | 7 | 155 | 590 | 2 | 441 | 9.96e-139 | 410 |
| MsG0780036700.01.T01 | MTR_0176s0050 | 52.154 | 441 | 199 | 7 | 155 | 590 | 2 | 435 | 1.46e-137 | 407 |
| MsG0780036700.01.T01 | MTR_0176s0050 | 51.802 | 444 | 198 | 7 | 157 | 590 | 73 | 510 | 2.54e-135 | 404 |
| MsG0780036700.01.T01 | MTR_0176s0050 | 35.604 | 323 | 151 | 10 | 14 | 286 | 1 | 316 | 3.94e-33 | 133 |
| MsG0780036700.01.T01 | MTR_7g105510 | 63.323 | 319 | 102 | 5 | 9 | 315 | 22 | 337 | 3.64e-131 | 387 |
| MsG0780036700.01.T01 | MTR_6g471290 | 51.007 | 447 | 192 | 9 | 12 | 455 | 18 | 440 | 1.54e-122 | 385 |
| MsG0780036700.01.T01 | MTR_6g471290 | 51.171 | 299 | 122 | 5 | 315 | 590 | 668 | 965 | 1.45e-82 | 278 |
| MsG0780036700.01.T01 | MTR_6g471290 | 49.841 | 315 | 141 | 8 | 8 | 313 | 482 | 788 | 2.78e-74 | 255 |
| MsG0780036700.01.T01 | MTR_2g032920 | 53.866 | 388 | 135 | 6 | 70 | 448 | 4 | 356 | 5.13e-122 | 365 |
| MsG0780036700.01.T01 | MTR_7g105980 | 60.900 | 289 | 102 | 6 | 277 | 558 | 65 | 349 | 4.26e-103 | 316 |
| MsG0780036700.01.T01 | MTR_7g105980 | 35.146 | 239 | 91 | 5 | 63 | 298 | 15 | 192 | 9.03e-29 | 118 |
| MsG0780036700.01.T01 | MTR_7g105980 | 61.131 | 283 | 99 | 6 | 283 | 558 | 1 | 279 | 1.21e-101 | 310 |
| MsG0780036700.01.T01 | MTR_7g105980 | 34.586 | 133 | 72 | 2 | 169 | 298 | 2 | 122 | 5.52e-13 | 70.5 |
| MsG0780036700.01.T01 | MTR_7g095340 | 68.539 | 178 | 51 | 2 | 15 | 187 | 3 | 180 | 9.41e-74 | 239 |
| MsG0780036700.01.T01 | MTR_2g064400 | 48.529 | 272 | 117 | 4 | 18 | 271 | 13 | 279 | 8.28e-70 | 234 |
| MsG0780036700.01.T01 | MTR_2g064400 | 39.085 | 284 | 147 | 7 | 300 | 561 | 185 | 464 | 1.65e-43 | 162 |
| MsG0780036700.01.T01 | MTR_7g095390 | 62.130 | 169 | 58 | 2 | 15 | 177 | 3 | 171 | 3.14e-61 | 201 |
| MsG0780036700.01.T01 | MTR_7g095310 | 54.667 | 225 | 88 | 5 | 127 | 337 | 1 | 225 | 4.30e-60 | 199 |
| MsG0780036700.01.T01 | MTR_6g471300 | 50.926 | 216 | 98 | 6 | 240 | 453 | 23 | 232 | 1.51e-50 | 174 |
| MsG0780036700.01.T01 | MTR_5g024120 | 39.931 | 288 | 97 | 7 | 14 | 298 | 1 | 215 | 7.73e-48 | 171 |
| MsG0780036700.01.T01 | MTR_5g024120 | 39.493 | 276 | 88 | 7 | 330 | 590 | 138 | 349 | 1.92e-47 | 170 |
| MsG0780036700.01.T01 | MTR_7g111110 | 70.213 | 94 | 25 | 1 | 14 | 107 | 1 | 91 | 5.59e-39 | 138 |
| MsG0780036700.01.T01 | MTR_7g114090 | 35.135 | 296 | 171 | 7 | 22 | 298 | 6 | 299 | 3.85e-35 | 138 |
| MsG0780036700.01.T01 | MTR_7g114090 | 25.828 | 302 | 192 | 10 | 297 | 581 | 177 | 463 | 3.49e-11 | 66.2 |
| MsG0780036700.01.T01 | MTR_1g115530 | 92.424 | 66 | 5 | 0 | 525 | 590 | 1 | 66 | 4.57e-35 | 126 |
| MsG0780036700.01.T01 | MTR_4g057860 | 62.376 | 101 | 33 | 1 | 478 | 573 | 1 | 101 | 4.58e-33 | 122 |
| MsG0780036700.01.T01 | MTR_7g092110 | 56.410 | 117 | 46 | 3 | 440 | 555 | 79 | 191 | 4.05e-32 | 123 |
| MsG0780036700.01.T01 | MTR_7g092110 | 68.085 | 47 | 14 | 1 | 14 | 60 | 25 | 70 | 1.66e-14 | 72.8 |
| MsG0780036700.01.T01 | MTR_7g116580 | 31.707 | 287 | 156 | 8 | 18 | 272 | 2 | 280 | 5.78e-32 | 129 |
| MsG0780036700.01.T01 | MTR_7g116580 | 26.740 | 273 | 173 | 9 | 297 | 547 | 179 | 446 | 1.31e-12 | 70.9 |
| MsG0780036700.01.T01 | MTR_7g105520 | 59.000 | 100 | 41 | 0 | 398 | 497 | 2 | 101 | 1.39e-31 | 118 |
| MsG0780036700.01.T01 | MTR_7g116250 | 37.391 | 230 | 117 | 6 | 22 | 226 | 6 | 233 | 1.42e-29 | 117 |
| MsG0780036700.01.T01 | MTR_6g071680 | 54.082 | 98 | 41 | 1 | 497 | 590 | 3 | 100 | 8.37e-29 | 110 |
| MsG0780036700.01.T01 | MTR_7g092645 | 59.524 | 84 | 34 | 0 | 500 | 583 | 6 | 89 | 4.14e-26 | 103 |
| MsG0780036700.01.T01 | MTR_7g089617 | 49.194 | 124 | 45 | 3 | 485 | 590 | 41 | 164 | 8.79e-26 | 104 |
| MsG0780036700.01.T01 | MTR_7g095660 | 50.505 | 99 | 36 | 3 | 474 | 571 | 18 | 104 | 6.20e-21 | 89.7 |
| MsG0780036700.01.T01 | MTR_7g111100 | 60.870 | 69 | 27 | 0 | 488 | 556 | 90 | 158 | 1.80e-19 | 87.4 |
| MsG0780036700.01.T01 | MTR_5g090500 | 33.161 | 193 | 112 | 7 | 95 | 274 | 7 | 195 | 4.69e-18 | 84.0 |
| MsG0780036700.01.T01 | MTR_1g014450 | 29.358 | 218 | 134 | 7 | 24 | 237 | 21 | 222 | 1.27e-17 | 86.3 |
| MsG0780036700.01.T01 | MTR_5g040850 | 30.242 | 248 | 150 | 7 | 24 | 265 | 12 | 242 | 2.24e-17 | 85.1 |
| MsG0780036700.01.T01 | MTR_2g032940 | 76.596 | 47 | 9 | 1 | 14 | 58 | 1 | 47 | 5.97e-17 | 75.5 |
| MsG0780036700.01.T01 | MTR_1g021825 | 31.111 | 225 | 128 | 8 | 22 | 242 | 20 | 221 | 1.20e-16 | 82.8 |
| MsG0780036700.01.T01 | MTR_1g013580 | 31.674 | 221 | 128 | 6 | 22 | 237 | 22 | 224 | 1.30e-16 | 82.8 |
| MsG0780036700.01.T01 | MTR_1g021820 | 29.148 | 223 | 126 | 7 | 22 | 237 | 31 | 228 | 1.33e-16 | 82.8 |
| MsG0780036700.01.T01 | MTR_1g021825 | 31.111 | 225 | 128 | 8 | 22 | 242 | 91 | 292 | 2.12e-16 | 82.8 |
| MsG0780036700.01.T01 | MTR_2g047858 | 29.730 | 222 | 139 | 4 | 22 | 242 | 118 | 323 | 4.64e-16 | 81.6 |
| MsG0780036700.01.T01 | MTR_1g013630 | 31.068 | 206 | 114 | 7 | 24 | 221 | 44 | 229 | 5.89e-16 | 80.5 |
| MsG0780036700.01.T01 | MTR_1g016310 | 27.982 | 218 | 140 | 4 | 22 | 237 | 23 | 225 | 6.37e-16 | 79.7 |
| MsG0780036700.01.T01 | MTR_1g016310 | 27.982 | 218 | 140 | 4 | 22 | 237 | 23 | 225 | 1.09e-15 | 80.1 |
| MsG0780036700.01.T01 | MTR_1g011410 | 28.302 | 265 | 163 | 7 | 9 | 273 | 305 | 542 | 4.05e-15 | 79.0 |
| MsG0780036700.01.T01 | MTR_1g011410 | 27.602 | 221 | 120 | 6 | 22 | 242 | 10 | 190 | 1.24e-12 | 71.2 |
| MsG0780036700.01.T01 | MTR_1g013610 | 28.571 | 217 | 121 | 6 | 24 | 237 | 12 | 197 | 5.93e-15 | 77.4 |
| MsG0780036700.01.T01 | MTR_2g047848 | 28.629 | 248 | 154 | 8 | 24 | 265 | 12 | 242 | 9.38e-15 | 77.0 |
| MsG0780036700.01.T01 | MTR_2g047872 | 28.182 | 220 | 139 | 6 | 24 | 242 | 28 | 229 | 3.12e-14 | 75.5 |
| MsG0780036700.01.T01 | MTR_1g013840 | 31.343 | 201 | 109 | 8 | 22 | 213 | 59 | 239 | 3.68e-14 | 75.5 |
| MsG0780036700.01.T01 | MTR_1g016340 | 29.646 | 226 | 143 | 6 | 22 | 244 | 18 | 230 | 4.34e-14 | 75.1 |
| MsG0780036700.01.T01 | MTR_1g016340 | 28.821 | 229 | 141 | 6 | 22 | 244 | 23 | 235 | 4.51e-14 | 75.1 |
| MsG0780036700.01.T01 | MTR_1g011430 | 28.448 | 232 | 145 | 5 | 22 | 253 | 10 | 220 | 8.61e-14 | 73.6 |
| MsG0780036700.01.T01 | MTR_4g057725 | 28.319 | 226 | 143 | 7 | 22 | 244 | 25 | 234 | 2.13e-13 | 73.2 |
| MsG0780036700.01.T01 | MTR_1g011400 | 29.839 | 248 | 144 | 7 | 28 | 271 | 16 | 237 | 3.68e-13 | 72.0 |
| MsG0780036700.01.T01 | MTR_2g091145 | 26.577 | 222 | 135 | 5 | 24 | 237 | 26 | 227 | 1.88e-12 | 70.1 |
| MsG0780036700.01.T01 | MTR_1g013560 | 28.295 | 258 | 123 | 12 | 22 | 267 | 22 | 229 | 2.88e-12 | 68.9 |
| MsG0780036700.01.T01 | MTR_1g013560 | 28.295 | 258 | 123 | 12 | 22 | 267 | 22 | 229 | 4.46e-12 | 68.9 |
| MsG0780036700.01.T01 | MTR_1g028860 | 29.048 | 210 | 129 | 8 | 32 | 237 | 3 | 196 | 4.75e-12 | 67.4 |
| MsG0780036700.01.T01 | MTR_0049s0110 | 28.922 | 204 | 123 | 7 | 19 | 221 | 8 | 190 | 1.31e-11 | 65.9 |
| MsG0780036700.01.T01 | MTR_0049s0110 | 28.922 | 204 | 123 | 7 | 19 | 221 | 8 | 190 | 3.05e-11 | 65.5 |
| MsG0780036700.01.T01 | MTR_0049s0110 | 28.922 | 204 | 123 | 7 | 19 | 221 | 8 | 190 | 3.21e-11 | 65.5 |
| MsG0780036700.01.T01 | MTR_0049s0110 | 28.922 | 204 | 123 | 7 | 19 | 221 | 8 | 190 | 3.85e-11 | 65.9 |
| MsG0780036700.01.T01 | MTR_6g034190 | 25.170 | 294 | 173 | 13 | 13 | 271 | 11 | 292 | 5.11e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036700.01.T01 | AT1G13570 | 29.500 | 200 | 120 | 7 | 14 | 213 | 1 | 179 | 1.27e-11 | 66.2 |
| MsG0780036700.01.T01 | AT1G61330 | 26.736 | 288 | 170 | 11 | 14 | 293 | 9 | 263 | 3.28e-11 | 66.2 |
| MsG0780036700.01.T01 | AT1G13570 | 29.500 | 200 | 120 | 7 | 14 | 213 | 1 | 179 | 3.78e-11 | 65.9 |
| MsG0780036700.01.T01 | AT1G13570 | 29.500 | 200 | 120 | 7 | 14 | 213 | 1 | 179 | 3.78e-11 | 65.9 |
Find 99 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTCACGAATGGGGTTTC+AGG | 0.179139 | 7:+12099679 | MsG0780036700.01.T01:CDS |
| ATCCTAATATGGACTACTTT+TGG | 0.238750 | 7:+12102071 | MsG0780036700.01.T01:CDS |
| ATCTCAATTTGCCACAATAT+TGG | 0.241079 | 7:+12099791 | MsG0780036700.01.T01:CDS |
| ACGACCGGTGAAGCTAAATT+TGG | 0.276490 | 7:-12100381 | None:intergenic |
| TATTATAGTCAAACATGTTT+TGG | 0.278761 | 7:-12099722 | None:intergenic |
| TAACTGTGGGATTAGCATTC+AGG | 0.282224 | 7:+12100256 | MsG0780036700.01.T01:CDS |
| CAAGTTAAGTATGAAAGATT+TGG | 0.297715 | 7:+12099629 | MsG0780036700.01.T01:CDS |
| CTTTAAGCACCTCATGAATA+AGG | 0.298664 | 7:-12102776 | None:intergenic |
| GATGGATGCAGTTGGAAAAT+AGG | 0.304259 | 7:-12100151 | None:intergenic |
| TGTGAATCAAGATATGTTTC+GGG | 0.314863 | 7:+12100127 | MsG0780036700.01.T01:CDS |
| ATGTGAATCAAGATATGTTT+CGG | 0.322952 | 7:+12100126 | MsG0780036700.01.T01:CDS |
| ATCCAAAAGTAGTCCATATT+AGG | 0.333779 | 7:-12102073 | None:intergenic |
| CAAATCTTTCATACTTAACT+TGG | 0.336894 | 7:-12099628 | None:intergenic |
| GAATTCAATCACAACAATAA+TGG | 0.350796 | 7:-12102961 | None:intergenic |
| ATTTCAAAACCTTCAACAAT+TGG | 0.355615 | 7:+12102024 | MsG0780036700.01.T01:CDS |
| TCTTGTGACAAATTCTATAT+AGG | 0.371244 | 7:+12102705 | MsG0780036700.01.T01:CDS |
| TCCCTATGTTGGTCACCTAA+TGG | 0.373909 | 7:-12099870 | None:intergenic |
| GGGAGCATCTGATCCTAATA+TGG | 0.378377 | 7:+12102060 | MsG0780036700.01.T01:CDS |
| AGATATCCACATCATCTCTT+TGG | 0.386509 | 7:+12100764 | MsG0780036700.01.T01:CDS |
| TTCTCGACATGACGTGATCT+TGG | 0.398614 | 7:-12100794 | None:intergenic |
| CTCTCATCCTTTGAATATAG+TGG | 0.406219 | 7:+12100671 | MsG0780036700.01.T01:CDS |
| GGCACCCTTAGCAATTCCTT+TGG | 0.408075 | 7:-12099913 | None:intergenic |
| TACTGAAAGGATGAGAGATT+TGG | 0.413992 | 7:-12100305 | None:intergenic |
| GCAACAACAGTTATCTCATC+TGG | 0.418118 | 7:-12100641 | None:intergenic |
| GAATAGCAGTTCAATACGTT+TGG | 0.424083 | 7:-12099934 | None:intergenic |
| TTAATAACTCCAATTGTTGA+AGG | 0.427707 | 7:-12102033 | None:intergenic |
| ATATTGTGGCAAATTGAGAT+TGG | 0.429203 | 7:-12099788 | None:intergenic |
| GAAACAATGGCTTCACGAAT+GGG | 0.433081 | 7:+12099671 | MsG0780036700.01.T01:CDS |
| AATGATTCTGCAATTCTTGA+AGG | 0.434167 | 7:-12100546 | None:intergenic |
| TCTATATAGGTGCCGAAAGA+TGG | 0.444813 | 7:+12102718 | MsG0780036700.01.T01:CDS |
| GAAAATTTACTCGGATAGAA+TGG | 0.454620 | 7:-12099848 | None:intergenic |
| TTCCATTAGGTGACCAACAT+AGG | 0.463838 | 7:+12099868 | MsG0780036700.01.T01:CDS |
| CAAATGAAACAATGTTGAAC+TGG | 0.468911 | 7:-12100225 | None:intergenic |
| TAAAGCTCCAAGGTTATTGA+AGG | 0.471745 | 7:+12100715 | MsG0780036700.01.T01:CDS |
| AGCGAACTTAACGAAGGTCT+TGG | 0.471991 | 7:+12101997 | MsG0780036700.01.T01:CDS |
| TTGTCCAAATTTAGCTTCAC+CGG | 0.475825 | 7:+12100377 | MsG0780036700.01.T01:CDS |
| GTAGCACCAATGGACTTCTC+TGG | 0.477151 | 7:+12100065 | MsG0780036700.01.T01:CDS |
| AGATGAAGTTACAGTTATCA+AGG | 0.480284 | 7:-12100187 | None:intergenic |
| AACACTACAAAGTTATAAGT+TGG | 0.486774 | 7:-12102818 | None:intergenic |
| CGAAACAATGGCTTCACGAA+TGG | 0.489107 | 7:+12099670 | MsG0780036700.01.T01:CDS |
| CTACTAGGAGGCATTTCTCT+AGG | 0.492470 | 7:-12100046 | None:intergenic |
| AGTTAGCCAGTCATCTATTG+AGG | 0.495680 | 7:+12102649 | MsG0780036700.01.T01:CDS |
| GTGTCAGATAAGAGAGCAAA+GGG | 0.497308 | 7:-12100002 | None:intergenic |
| TTTAATCCAGAAAATCCAAC+CGG | 0.499355 | 7:-12100425 | None:intergenic |
| AGAGCAAAGGGAAATTTGTA+TGG | 0.501584 | 7:-12099990 | None:intergenic |
| ATGTAAGATACAATACAATC+AGG | 0.507879 | 7:-12099600 | None:intergenic |
| AGAAGTCCATTGGTGCTACT+AGG | 0.508255 | 7:-12100061 | None:intergenic |
| ATTTGAACATTGTTAACTGT+GGG | 0.508598 | 7:+12100243 | MsG0780036700.01.T01:CDS |
| TCCATTAGGTGACCAACATA+GGG | 0.510943 | 7:+12099869 | MsG0780036700.01.T01:CDS |
| ATTGACAAATTGATTTCCAA+AGG | 0.513431 | 7:+12099897 | MsG0780036700.01.T01:CDS |
| TATGATCATGATGCCTTCAC+AGG | 0.517005 | 7:+12100823 | MsG0780036700.01.T01:CDS |
| TACTCGGATAGAATGGATCA+TGG | 0.521052 | 7:-12099841 | None:intergenic |
| TTCTAAATGTTACCAACTTG+AGG | 0.523082 | 7:+12100517 | MsG0780036700.01.T01:CDS |
| CACATTCCTCAATAGATGAC+TGG | 0.525938 | 7:-12102655 | None:intergenic |
| CACCTAATGGAAAATTTACT+CGG | 0.528311 | 7:-12099857 | None:intergenic |
| TGTCAATGACATCCCTATGT+TGG | 0.535171 | 7:-12099881 | None:intergenic |
| GATTTCCAAAGGAATTGCTA+AGG | 0.537839 | 7:+12099908 | MsG0780036700.01.T01:CDS |
| TTGAATCCAGAGAAGTCCAT+TGG | 0.541899 | 7:-12100071 | None:intergenic |
| CATAGGCAAAGAAGAGAACA+TGG | 0.546734 | 7:+12102558 | MsG0780036700.01.T01:CDS |
| ATTTCCAAAGGAATTGCTAA+GGG | 0.551784 | 7:+12099909 | MsG0780036700.01.T01:CDS |
| GTCTACAAGATGGATGCAGT+TGG | 0.552883 | 7:-12100159 | None:intergenic |
| TTTGACTGACTCACCTGTGA+AGG | 0.553774 | 7:-12100836 | None:intergenic |
| ATTAGAAATTCACATGTGGA+TGG | 0.563552 | 7:+12102531 | MsG0780036700.01.T01:CDS |
| CATTTGAACATTGTTAACTG+TGG | 0.570732 | 7:+12100242 | MsG0780036700.01.T01:CDS |
| AAATGTGACAACAATTGTGT+TGG | 0.571151 | 7:+12100448 | MsG0780036700.01.T01:CDS |
| TGTGTCAGATAAGAGAGCAA+AGG | 0.573017 | 7:-12100003 | None:intergenic |
| GTGACAACAATTGTGTTGGA+TGG | 0.573798 | 7:+12100452 | MsG0780036700.01.T01:CDS |
| TGAAGGTGACGTCCTCAAGT+TGG | 0.573852 | 7:-12100529 | None:intergenic |
| CACATGTGGATGGATCTCAT+AGG | 0.576807 | 7:+12102541 | MsG0780036700.01.T01:CDS |
| TGTGTAGCCACTATATTCAA+AGG | 0.577002 | 7:-12100678 | None:intergenic |
| ACAATTGGAGTTATTAATCG+AGG | 0.578365 | 7:+12102039 | MsG0780036700.01.T01:CDS |
| AACTTCATGTTAAAGCTCCA+AGG | 0.580258 | 7:+12100705 | MsG0780036700.01.T01:CDS |
| TAGAATGGATCATGGGACCT+TGG | 0.583139 | 7:-12099833 | None:intergenic |
| GGCTAACTCAATCACATCCA+TGG | 0.586528 | 7:-12102634 | None:intergenic |
| CAAGGGTGAAGTCTACAAGA+TGG | 0.587519 | 7:-12100169 | None:intergenic |
| TTGAATATAGTGGCTACACA+AGG | 0.587836 | 7:+12100681 | MsG0780036700.01.T01:CDS |
| TTGAAATATGTCGAGTTACG+TGG | 0.593759 | 7:+12102600 | MsG0780036700.01.T01:CDS |
| CGTGTGCAGCAGCAATGAAG+AGG | 0.594439 | 7:+12099553 | MsG0780036700.01.T01:CDS |
| CAATTGGAGTTATTAATCGA+GGG | 0.598215 | 7:+12102040 | MsG0780036700.01.T01:CDS |
| GTGGGATTAGCATTCAGGAT+AGG | 0.598512 | 7:+12100261 | MsG0780036700.01.T01:CDS |
| ATGCCTCCTAGTAGCACCAA+TGG | 0.599548 | 7:+12100055 | MsG0780036700.01.T01:CDS |
| TCTCAGAAAACTTTCTCTGA+CGG | 0.603077 | 7:+12102123 | MsG0780036700.01.T01:CDS |
| CATGAATTGATCCAATATTG+TGG | 0.603152 | 7:-12099802 | None:intergenic |
| ATCAATACAAGAATACTGAA+AGG | 0.604524 | 7:-12100318 | None:intergenic |
| CTAGCACATTGTCGAAACAA+TGG | 0.613854 | 7:+12099658 | MsG0780036700.01.T01:CDS |
| GATGAAGTTACAGTTATCAA+GGG | 0.618853 | 7:-12100186 | None:intergenic |
| ATTGCACCAAAGAGATGATG+TGG | 0.620114 | 7:-12100770 | None:intergenic |
| ACTCGGATAGAATGGATCAT+GGG | 0.621990 | 7:-12099840 | None:intergenic |
| AAACAATGGCTTCACGAATG+GGG | 0.623832 | 7:+12099672 | MsG0780036700.01.T01:CDS |
| TGATCGTAACCTTATTCATG+AGG | 0.624197 | 7:+12102767 | MsG0780036700.01.T01:CDS |
| TAACATTTAGAAAACAACTC+AGG | 0.631015 | 7:-12100506 | None:intergenic |
| AGTCCATTGGTGCTACTAGG+AGG | 0.635039 | 7:-12100058 | None:intergenic |
| TCAGATTAGAAATTCACATG+TGG | 0.645312 | 7:+12102527 | MsG0780036700.01.T01:intron |
| ACGTGGTTGTGTTTGCACCA+TGG | 0.649381 | 7:+12102617 | MsG0780036700.01.T01:CDS |
| CATTTGAAAATAATTGACTG+TGG | 0.673749 | 7:+12100602 | MsG0780036700.01.T01:CDS |
| CAATTCATGATGCATTACCA+AGG | 0.695900 | 7:+12099816 | MsG0780036700.01.T01:CDS |
| TGAATATAGTGGCTACACAA+GGG | 0.707131 | 7:+12100682 | MsG0780036700.01.T01:CDS |
| ACAGATAGCGAACTTAACGA+AGG | 0.711500 | 7:+12101991 | MsG0780036700.01.T01:intron |
| GTGAATCAAGATATGTTTCG+GGG | 0.727241 | 7:+12100128 | MsG0780036700.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | Chr7:12101261-12101280 | None:intergenic | 0.0% |
| !! | GTTTCAAAAAAAAAAATTAT+GGG | - | Chr7:12101332-12101351 | None:intergenic | 10.0% |
| !! | TAATTTACTTTAAATATTAC+TGG | + | Chr7:12101963-12101982 | MsG0780036700.01.T01:intron | 10.0% |
| !!! | TATTCAAACTTTTATTTTTT+AGG | + | Chr7:12102151-12102170 | MsG0780036700.01.T01:intron | 10.0% |
| !! | ACTAATATCCATAAAAAAAT+AGG | - | Chr7:12102202-12102221 | None:intergenic | 15.0% |
| !! | GGTTTCAAAAAAAAAAATTA+TGG | - | Chr7:12101333-12101352 | None:intergenic | 15.0% |
| !!! | ACTTTTTAGAATTTTTAAAC+CGG | + | Chr7:12100406-12100425 | MsG0780036700.01.T01:CDS | 15.0% |
| !!! | AGTTATAACCTATTTTTTTA+TGG | + | Chr7:12102191-12102210 | MsG0780036700.01.T01:intron | 15.0% |
| !!! | ATTATGGGTTTTTATAATTA+TGG | - | Chr7:12101317-12101336 | None:intergenic | 15.0% |
| !!! | TTGGATTTTAGATATTATAA+TGG | + | Chr7:12102090-12102109 | MsG0780036700.01.T01:CDS | 15.0% |
| !!! | TTTTTTTTTCCTTCAAATTT+GGG | + | Chr7:12101596-12101615 | MsG0780036700.01.T01:intron | 15.0% |
| !!! | TTTTTTTTTTCCTTCAAATT+TGG | + | Chr7:12101595-12101614 | MsG0780036700.01.T01:intron | 15.0% |
| !! | AAAAAATAAGAAAAAGCTTG+TGG | - | Chr7:12101884-12101903 | None:intergenic | 20.0% |
| !! | AAACAATAAACATCATAAGT+AGG | - | Chr7:12100863-12100882 | None:intergenic | 20.0% |
| !! | CATTTAAACATATGTATGTT+TGG | - | Chr7:12101227-12101246 | None:intergenic | 20.0% |
| !!! | AAGAAGTTGATATAAATTTG+TGG | - | Chr7:12101355-12101374 | None:intergenic | 20.0% |
| !!! | AGAAGTTGATATAAATTTGT+GGG | - | Chr7:12101354-12101373 | None:intergenic | 20.0% |
| !!! | ATATGAGCCATAATTTTTAT+TGG | - | Chr7:12100356-12100375 | None:intergenic | 20.0% |
| !!! | GAATGAAACTGATTTTATTT+TGG | + | Chr7:12099959-12099978 | MsG0780036700.01.T01:CDS | 20.0% |
| !!! | TATGAGCCATAATTTTTATT+GGG | - | Chr7:12100355-12100374 | None:intergenic | 20.0% |
| !!! | TATTATAGTCAAACATGTTT+TGG | - | Chr7:12099725-12099744 | None:intergenic | 20.0% |
| !!! | TTCTTATTTTTTTCTGCTAT+TGG | + | Chr7:12101892-12101911 | MsG0780036700.01.T01:intron | 20.0% |
| !!! | TTTTTGGAATAATATTCTTC+TGG | + | Chr7:12101440-12101459 | MsG0780036700.01.T01:intron | 20.0% |
| ! | AAAAAATTTGCATCTGGATT+GGG | - | Chr7:12101425-12101444 | None:intergenic | 25.0% |
| ! | AACACTACAAAGTTATAAGT+TGG | - | Chr7:12102821-12102840 | None:intergenic | 25.0% |
| ! | AGAACACCCAATAAAAATTA+TGG | + | Chr7:12100346-12100365 | MsG0780036700.01.T01:CDS | 25.0% |
| ! | ATACCAACTCTTAAAAATCA+TGG | - | Chr7:12102445-12102464 | None:intergenic | 25.0% |
| ! | ATCAATACAAGAATACTGAA+AGG | - | Chr7:12100321-12100340 | None:intergenic | 25.0% |
| ! | ATGTAAGATACAATACAATC+AGG | - | Chr7:12099603-12099622 | None:intergenic | 25.0% |
| ! | ATGTGAATCAAGATATGTTT+CGG | + | Chr7:12100126-12100145 | MsG0780036700.01.T01:CDS | 25.0% |
| ! | ATTTCAAAACCTTCAACAAT+TGG | + | Chr7:12102024-12102043 | MsG0780036700.01.T01:CDS | 25.0% |
| ! | ATTTGAACATTGTTAACTGT+GGG | + | Chr7:12100243-12100262 | MsG0780036700.01.T01:CDS | 25.0% |
| ! | CAAATCTTTCATACTTAACT+TGG | - | Chr7:12099631-12099650 | None:intergenic | 25.0% |
| ! | CAAGTTAAGTATGAAAGATT+TGG | + | Chr7:12099629-12099648 | MsG0780036700.01.T01:CDS | 25.0% |
| ! | CACATTGTGAACATTAAATA+AGG | - | Chr7:12102273-12102292 | None:intergenic | 25.0% |
| ! | CATTTGAAAATAATTGACTG+TGG | + | Chr7:12100602-12100621 | MsG0780036700.01.T01:CDS | 25.0% |
| ! | CGATTAATTAAAAGAAACCA+AGG | - | Chr7:12101921-12101940 | None:intergenic | 25.0% |
| ! | GAATTCAATCACAACAATAA+TGG | - | Chr7:12102964-12102983 | None:intergenic | 25.0% |
| ! | TAACATTTAGAAAACAACTC+AGG | - | Chr7:12100509-12100528 | None:intergenic | 25.0% |
| ! | TATTCCAAAAAATTTGCATC+TGG | - | Chr7:12101431-12101450 | None:intergenic | 25.0% |
| ! | TCTTGTGACAAATTCTATAT+AGG | + | Chr7:12102705-12102724 | MsG0780036700.01.T01:CDS | 25.0% |
| ! | TTAATAACTCCAATTGTTGA+AGG | - | Chr7:12102036-12102055 | None:intergenic | 25.0% |
| !! | AATTCTAAAAAGTTTACGAC+CGG | - | Chr7:12100399-12100418 | None:intergenic | 25.0% |
| !! | ATCATAGCAACAATATTTTG+AGG | - | Chr7:12102751-12102770 | None:intergenic | 25.0% |
| !! | ATGGGTTTTTATAATTATGG+AGG | - | Chr7:12101314-12101333 | None:intergenic | 25.0% |
| !! | ATTGACAAATTGATTTCCAA+AGG | + | Chr7:12099897-12099916 | MsG0780036700.01.T01:CDS | 25.0% |
| !! | CATATGTTTAAATGCTCTTT+TGG | + | Chr7:12101233-12101252 | MsG0780036700.01.T01:intron | 25.0% |
| !!! | TTGTCATAAGTTGTTTTCAT+AGG | - | Chr7:12101054-12101073 | None:intergenic | 25.0% |
| !!! | TTTAGAATTTTTAAACCGGT+TGG | + | Chr7:12100410-12100429 | MsG0780036700.01.T01:CDS | 25.0% |
| AAAAATTTGCATCTGGATTG+GGG | - | Chr7:12101424-12101443 | None:intergenic | 30.0% | |
| AAATGTGACAACAATTGTGT+TGG | + | Chr7:12100448-12100467 | MsG0780036700.01.T01:CDS | 30.0% | |
| AACATGCCTATATATTCGAA+TGG | - | Chr7:12100972-12100991 | None:intergenic | 30.0% | |
| AACTCTTAAAAATCATGGCT+GGG | - | Chr7:12102440-12102459 | None:intergenic | 30.0% | |
| AATGATTCTGCAATTCTTGA+AGG | - | Chr7:12100549-12100568 | None:intergenic | 30.0% | |
| ACAATTGGAGTTATTAATCG+AGG | + | Chr7:12102039-12102058 | MsG0780036700.01.T01:CDS | 30.0% | |
| AGATGAAGTTACAGTTATCA+AGG | - | Chr7:12100190-12100209 | None:intergenic | 30.0% | |
| ATATATAGGCATGTTTGGAT+TGG | + | Chr7:12100977-12100996 | MsG0780036700.01.T01:intron | 30.0% | |
| ATATTGTGGCAAATTGAGAT+TGG | - | Chr7:12099791-12099810 | None:intergenic | 30.0% | |
| ATCCAAAAGTAGTCCATATT+AGG | - | Chr7:12102076-12102095 | None:intergenic | 30.0% | |
| ATCTCAATTTGCCACAATAT+TGG | + | Chr7:12099791-12099810 | MsG0780036700.01.T01:CDS | 30.0% | |
| ATTAGAAATTCACATGTGGA+TGG | + | Chr7:12102531-12102550 | MsG0780036700.01.T01:CDS | 30.0% | |
| ATTTCCAAAGGAATTGCTAA+GGG | + | Chr7:12099909-12099928 | MsG0780036700.01.T01:CDS | 30.0% | |
| CAAAAAACCTTCAATAACCT+TGG | - | Chr7:12100725-12100744 | None:intergenic | 30.0% | |
| CAAAAAATTTGCATCTGGAT+TGG | - | Chr7:12101426-12101445 | None:intergenic | 30.0% | |
| CAAATGAAACAATGTTGAAC+TGG | - | Chr7:12100228-12100247 | None:intergenic | 30.0% | |
| CAATTGGAGTTATTAATCGA+GGG | + | Chr7:12102040-12102059 | MsG0780036700.01.T01:CDS | 30.0% | |
| CACCTAATGGAAAATTTACT+CGG | - | Chr7:12099860-12099879 | None:intergenic | 30.0% | |
| CATGAATTGATCCAATATTG+TGG | - | Chr7:12099805-12099824 | None:intergenic | 30.0% | |
| CATTTGAACATTGTTAACTG+TGG | + | Chr7:12100242-12100261 | MsG0780036700.01.T01:CDS | 30.0% | |
| CTGAACATGTGTTTATAAGT+CGG | + | Chr7:12102370-12102389 | MsG0780036700.01.T01:intron | 30.0% | |
| GAAAATTTACTCGGATAGAA+TGG | - | Chr7:12099851-12099870 | None:intergenic | 30.0% | |
| GATGAAGTTACAGTTATCAA+GGG | - | Chr7:12100189-12100208 | None:intergenic | 30.0% | |
| TCAGATTAGAAATTCACATG+TGG | + | Chr7:12102527-12102546 | MsG0780036700.01.T01:intron | 30.0% | |
| TGAACATGTGTTTATAAGTC+GGG | + | Chr7:12102371-12102390 | MsG0780036700.01.T01:intron | 30.0% | |
| TGTGAATCAAGATATGTTTC+GGG | + | Chr7:12100127-12100146 | MsG0780036700.01.T01:CDS | 30.0% | |
| TTCGAATATATAGGCATGTT+TGG | + | Chr7:12100972-12100991 | MsG0780036700.01.T01:intron | 30.0% | |
| TTCTAAATGTTACCAACTTG+AGG | + | Chr7:12100517-12100536 | MsG0780036700.01.T01:CDS | 30.0% | |
| TTTAATCCAGAAAATCCAAC+CGG | - | Chr7:12100428-12100447 | None:intergenic | 30.0% | |
| ! | ATCCGAGTAAATTTTCCATT+AGG | + | Chr7:12099855-12099874 | MsG0780036700.01.T01:CDS | 30.0% |
| ! | GAATAATATTCTTCTGGTTG+TGG | + | Chr7:12101446-12101465 | MsG0780036700.01.T01:intron | 30.0% |
| ! | GCTTATTTGAGTTTATCTAC+TGG | + | Chr7:12100999-12101018 | MsG0780036700.01.T01:intron | 30.0% |
| ! | TACTTTAAAGAGTTCCACTT+CGG | + | Chr7:12102335-12102354 | MsG0780036700.01.T01:intron | 30.0% |
| !! | ATCCTAATATGGACTACTTT+TGG | + | Chr7:12102071-12102090 | MsG0780036700.01.T01:CDS | 30.0% |
| !!! | ATATACCACTATGTCGATTT+TGG | - | Chr7:12100931-12100950 | None:intergenic | 30.0% |
| !!! | CAAGGTTATTGAAGGTTTTT+TGG | + | Chr7:12100723-12100742 | MsG0780036700.01.T01:CDS | 30.0% |
| !!! | CAATCCAGATGCAAATTTTT+TGG | + | Chr7:12101424-12101443 | MsG0780036700.01.T01:intron | 30.0% |
| !!! | TATACCACTATGTCGATTTT+GGG | - | Chr7:12100930-12100949 | None:intergenic | 30.0% |
| !!! | TGAAAGAGTCGAAAGTTTTT+TGG | - | Chr7:12099762-12099781 | None:intergenic | 30.0% |
| AACATGTGTTTATAAGTCGG+GGG | + | Chr7:12102373-12102392 | MsG0780036700.01.T01:intron | 35.0% | |
| AACTTCATGTTAAAGCTCCA+AGG | + | Chr7:12100705-12100724 | MsG0780036700.01.T01:CDS | 35.0% | |
| AGAGCAAAGGGAAATTTGTA+TGG | - | Chr7:12099993-12100012 | None:intergenic | 35.0% | |
| AGATATCCACATCATCTCTT+TGG | + | Chr7:12100764-12100783 | MsG0780036700.01.T01:CDS | 35.0% | |
| ATGTTGTCAACCTTTGATAG+TGG | + | Chr7:12100889-12100908 | MsG0780036700.01.T01:intron | 35.0% | |
| ATTGCAAGACCCAAATTTGA+AGG | - | Chr7:12101608-12101627 | None:intergenic | 35.0% | |
| CAACTCTTAAAAATCATGGC+TGG | - | Chr7:12102441-12102460 | None:intergenic | 35.0% | |
| CAATTCATGATGCATTACCA+AGG | + | Chr7:12099816-12099835 | MsG0780036700.01.T01:CDS | 35.0% | |
| CATAGTGGTATATTGCATTG+TGG | + | Chr7:12100938-12100957 | MsG0780036700.01.T01:intron | 35.0% | |
| CGACTTATAAACACATGTTC+AGG | - | Chr7:12102372-12102391 | None:intergenic | 35.0% | |
| CTCTCATCCTTTGAATATAG+TGG | + | Chr7:12100671-12100690 | MsG0780036700.01.T01:CDS | 35.0% | |
| CTGCTTCCATTCGAATATAT+AGG | + | Chr7:12100963-12100982 | MsG0780036700.01.T01:intron | 35.0% | |
| CTTTAAGCACCTCATGAATA+AGG | - | Chr7:12102779-12102798 | None:intergenic | 35.0% | |
| GAACATGTGTTTATAAGTCG+GGG | + | Chr7:12102372-12102391 | MsG0780036700.01.T01:intron | 35.0% | |
| GAATAGCAGTTCAATACGTT+TGG | - | Chr7:12099937-12099956 | None:intergenic | 35.0% | |
| GATTTCCAAAGGAATTGCTA+AGG | + | Chr7:12099908-12099927 | MsG0780036700.01.T01:CDS | 35.0% | |
| GTGAATCAAGATATGTTTCG+GGG | + | Chr7:12100128-12100147 | MsG0780036700.01.T01:CDS | 35.0% | |
| TAAAGCTCCAAGGTTATTGA+AGG | + | Chr7:12100715-12100734 | MsG0780036700.01.T01:CDS | 35.0% | |
| TACTGAAAGGATGAGAGATT+TGG | - | Chr7:12100308-12100327 | None:intergenic | 35.0% | |
| TCTCAGAAAACTTTCTCTGA+CGG | + | Chr7:12102123-12102142 | MsG0780036700.01.T01:CDS | 35.0% | |
| TGAAATTCTCAATCCCAACA+TGG | + | Chr7:12101684-12101703 | MsG0780036700.01.T01:intron | 35.0% | |
| TGAATATAGTGGCTACACAA+GGG | + | Chr7:12100682-12100701 | MsG0780036700.01.T01:CDS | 35.0% | |
| TGATCGTAACCTTATTCATG+AGG | + | Chr7:12102767-12102786 | MsG0780036700.01.T01:CDS | 35.0% | |
| TGTGTAGCCACTATATTCAA+AGG | - | Chr7:12100681-12100700 | None:intergenic | 35.0% | |
| TTGAAATATGTCGAGTTACG+TGG | + | Chr7:12102600-12102619 | MsG0780036700.01.T01:CDS | 35.0% | |
| TTGAATATAGTGGCTACACA+AGG | + | Chr7:12100681-12100700 | MsG0780036700.01.T01:CDS | 35.0% | |
| ! | AAAATTTGCATCTGGATTGG+GGG | - | Chr7:12101423-12101442 | None:intergenic | 35.0% |
| ! | TTGTCCAAATTTAGCTTCAC+CGG | + | Chr7:12100377-12100396 | MsG0780036700.01.T01:CDS | 35.0% |
| ! | TTTAAACCGGTTGGATTTTC+TGG | + | Chr7:12100419-12100438 | MsG0780036700.01.T01:CDS | 35.0% |
| ! | TTTTCAAATGACGCAGCTTT+CGG | - | Chr7:12100592-12100611 | None:intergenic | 35.0% |
| !! | AAGAGTTGGTATATGTCTGA+TGG | + | Chr7:12102453-12102472 | MsG0780036700.01.T01:intron | 35.0% |
| !! | CAGCCATGATTTTTAAGAGT+TGG | + | Chr7:12102439-12102458 | MsG0780036700.01.T01:intron | 35.0% |
| !! | TGAGGTTTTAGTCCATCTTT+CGG | - | Chr7:12102733-12102752 | None:intergenic | 35.0% |
| !!! | GGTTTTTTGGAATGCAACTA+AGG | + | Chr7:12100736-12100755 | MsG0780036700.01.T01:CDS | 35.0% |
| !!! | TGCAACAAAGTGATGGATTT+TGG | + | Chr7:12101654-12101673 | MsG0780036700.01.T01:intron | 35.0% |
| !!! | TGTTTTGGAGATCAAAGTTG+AGG | - | Chr7:12099710-12099729 | None:intergenic | 35.0% |
| AAACAATGGCTTCACGAATG+GGG | + | Chr7:12099672-12099691 | MsG0780036700.01.T01:CDS | 40.0% | |
| AAACGCCTAACAAACACAGA+GGG | + | Chr7:12101526-12101545 | MsG0780036700.01.T01:intron | 40.0% | |
| ACAGATAGCGAACTTAACGA+AGG | + | Chr7:12101991-12102010 | MsG0780036700.01.T01:intron | 40.0% | |
| ACTCGGATAGAATGGATCAT+GGG | - | Chr7:12099843-12099862 | None:intergenic | 40.0% | |
| AGTTAGCCAGTCATCTATTG+AGG | + | Chr7:12102649-12102668 | MsG0780036700.01.T01:CDS | 40.0% | |
| ATTGCACCAAAGAGATGATG+TGG | - | Chr7:12100773-12100792 | None:intergenic | 40.0% | |
| CACATTCCTCAATAGATGAC+TGG | - | Chr7:12102658-12102677 | None:intergenic | 40.0% | |
| CATAGGCAAAGAAGAGAACA+TGG | + | Chr7:12102558-12102577 | MsG0780036700.01.T01:CDS | 40.0% | |
| CTAGCACATTGTCGAAACAA+TGG | + | Chr7:12099658-12099677 | MsG0780036700.01.T01:CDS | 40.0% | |
| GAAACAATGGCTTCACGAAT+GGG | + | Chr7:12099671-12099690 | MsG0780036700.01.T01:CDS | 40.0% | |
| GATGGATGCAGTTGGAAAAT+AGG | - | Chr7:12100154-12100173 | None:intergenic | 40.0% | |
| GCAACAACAGTTATCTCATC+TGG | - | Chr7:12100644-12100663 | None:intergenic | 40.0% | |
| GCAATGAAACAGTAATGCGA+AGG | - | Chr7:12101634-12101653 | None:intergenic | 40.0% | |
| GTGACAACAATTGTGTTGGA+TGG | + | Chr7:12100452-12100471 | MsG0780036700.01.T01:CDS | 40.0% | |
| GTGTCAGATAAGAGAGCAAA+GGG | - | Chr7:12100005-12100024 | None:intergenic | 40.0% | |
| TACTCGGATAGAATGGATCA+TGG | - | Chr7:12099844-12099863 | None:intergenic | 40.0% | |
| TATGATCATGATGCCTTCAC+AGG | + | Chr7:12100823-12100842 | MsG0780036700.01.T01:CDS | 40.0% | |
| TCATTGCTGCAACAAAGTGA+TGG | + | Chr7:12101647-12101666 | MsG0780036700.01.T01:intron | 40.0% | |
| TCCATTAGGTGACCAACATA+GGG | + | Chr7:12099869-12099888 | MsG0780036700.01.T01:CDS | 40.0% | |
| TCTTTCCCTCTGTGTTTGTT+AGG | - | Chr7:12101534-12101553 | None:intergenic | 40.0% | |
| TGTCAATGACATCCCTATGT+TGG | - | Chr7:12099884-12099903 | None:intergenic | 40.0% | |
| TGTGTCAGATAAGAGAGCAA+AGG | - | Chr7:12100006-12100025 | None:intergenic | 40.0% | |
| TGTTAGGCGTTTGTAGGTAA+TGG | - | Chr7:12101518-12101537 | None:intergenic | 40.0% | |
| TTCCATTAGGTGACCAACAT+AGG | + | Chr7:12099868-12099887 | MsG0780036700.01.T01:CDS | 40.0% | |
| TTGAATCCAGAGAAGTCCAT+TGG | - | Chr7:12100074-12100093 | None:intergenic | 40.0% | |
| TTGTCCCAAAATCGACATAG+TGG | + | Chr7:12100923-12100942 | MsG0780036700.01.T01:intron | 40.0% | |
| ! | AGAATCGGAAGTCTAGAGTT+GGG | + | Chr7:12101555-12101574 | MsG0780036700.01.T01:intron | 40.0% |
| ! | TAACTGTGGGATTAGCATTC+AGG | + | Chr7:12100256-12100275 | MsG0780036700.01.T01:CDS | 40.0% |
| ! | TGTGTTTGTTAGGCGTTTGT+AGG | - | Chr7:12101524-12101543 | None:intergenic | 40.0% |
| !! | TCTATATAGGTGCCGAAAGA+TGG | + | Chr7:12102718-12102737 | MsG0780036700.01.T01:CDS | 40.0% |
| !! | TTTTCTGCTATTGGTTGCCT+TGG | + | Chr7:12101901-12101920 | MsG0780036700.01.T01:intron | 40.0% |
| AACATGGCAATACAACCGAG+TGG | + | Chr7:12101700-12101719 | MsG0780036700.01.T01:intron | 45.0% | |
| ACGACCGGTGAAGCTAAATT+TGG | - | Chr7:12100384-12100403 | None:intergenic | 45.0% | |
| ACTCGGTTGTATTGCCATGT+TGG | - | Chr7:12101701-12101720 | None:intergenic | 45.0% | |
| AGCGAACTTAACGAAGGTCT+TGG | + | Chr7:12101997-12102016 | MsG0780036700.01.T01:CDS | 45.0% | |
| AGGTCATCGTTTATCCGAAG+TGG | - | Chr7:12102352-12102371 | None:intergenic | 45.0% | |
| ATGTTACGCGCCACTATCAA+AGG | - | Chr7:12100902-12100921 | None:intergenic | 45.0% | |
| CAAACGCCTAACAAACACAG+AGG | + | Chr7:12101525-12101544 | MsG0780036700.01.T01:intron | 45.0% | |
| CAAGGGTGAAGTCTACAAGA+TGG | - | Chr7:12100172-12100191 | None:intergenic | 45.0% | |
| CACAGAGGGAAAGAGAGAAT+CGG | + | Chr7:12101540-12101559 | MsG0780036700.01.T01:intron | 45.0% | |
| CACATGTGGATGGATCTCAT+AGG | + | Chr7:12102541-12102560 | MsG0780036700.01.T01:CDS | 45.0% | |
| CGAAACAATGGCTTCACGAA+TGG | + | Chr7:12099670-12099689 | MsG0780036700.01.T01:CDS | 45.0% | |
| CTAACAGAACCCCACAAAAC+TGG | - | Chr7:12102416-12102435 | None:intergenic | 45.0% | |
| CTCGGTTGTATTGCCATGTT+GGG | - | Chr7:12101700-12101719 | None:intergenic | 45.0% | |
| GGCTAACTCAATCACATCCA+TGG | - | Chr7:12102637-12102656 | None:intergenic | 45.0% | |
| GTCTACAAGATGGATGCAGT+TGG | - | Chr7:12100162-12100181 | None:intergenic | 45.0% | |
| TAGAATGGATCATGGGACCT+TGG | - | Chr7:12099836-12099855 | None:intergenic | 45.0% | |
| TCCCTATGTTGGTCACCTAA+TGG | - | Chr7:12099873-12099892 | None:intergenic | 45.0% | |
| TTCTCGACATGACGTGATCT+TGG | - | Chr7:12100797-12100816 | None:intergenic | 45.0% | |
| ! | AATGTCTGGGGTGATGATAC+TGG | + | Chr7:12101724-12101743 | MsG0780036700.01.T01:intron | 45.0% |
| ! | ATGTCTGGGGTGATGATACT+GGG | + | Chr7:12101725-12101744 | MsG0780036700.01.T01:intron | 45.0% |
| ! | GAGAATCGGAAGTCTAGAGT+TGG | + | Chr7:12101554-12101573 | MsG0780036700.01.T01:intron | 45.0% |
| ! | GTGGGATTAGCATTCAGGAT+AGG | + | Chr7:12100261-12100280 | MsG0780036700.01.T01:CDS | 45.0% |
| ! | TTTGACTGACTCACCTGTGA+AGG | - | Chr7:12100839-12100858 | None:intergenic | 45.0% |
| !! | ACCGCACAATCCAGTTTTGT+GGG | + | Chr7:12102403-12102422 | MsG0780036700.01.T01:intron | 45.0% |
| !! | AGAAGTCCATTGGTGCTACT+AGG | - | Chr7:12100064-12100083 | None:intergenic | 45.0% |
| !! | CAGTTTTGTGGGGTTCTGTT+AGG | + | Chr7:12102414-12102433 | MsG0780036700.01.T01:intron | 45.0% |
| !! | CTACTAGGAGGCATTTCTCT+AGG | - | Chr7:12100049-12100068 | None:intergenic | 45.0% |
| !! | GGGAGCATCTGATCCTAATA+TGG | + | Chr7:12102060-12102079 | MsG0780036700.01.T01:CDS | 45.0% |
| !!! | TTTAGTTATTTTATTTATAA+TGG | + | Chr7:12102929-12102948 | MsG0780036700.01.T01:three_prime_UTR | 5.0% |
| ACAACCGAGTGGCAATGTCT+GGG | + | Chr7:12101711-12101730 | MsG0780036700.01.T01:intron | 50.0% | |
| ACGTGGTTGTGTTTGCACCA+TGG | + | Chr7:12102617-12102636 | MsG0780036700.01.T01:CDS | 50.0% | |
| ATGCCTCCTAGTAGCACCAA+TGG | + | Chr7:12100055-12100074 | MsG0780036700.01.T01:CDS | 50.0% | |
| CCCCACAAAACTGGATTGTG+CGG | - | Chr7:12102407-12102426 | None:intergenic | 50.0% | |
| GGCACCCTTAGCAATTCCTT+TGG | - | Chr7:12099916-12099935 | None:intergenic | 50.0% | |
| TACAACCGAGTGGCAATGTC+TGG | + | Chr7:12101710-12101729 | MsG0780036700.01.T01:intron | 50.0% | |
| TGAAGGTGACGTCCTCAAGT+TGG | - | Chr7:12100532-12100551 | None:intergenic | 50.0% | |
| ! | CACCGCACAATCCAGTTTTG+TGG | + | Chr7:12102402-12102421 | MsG0780036700.01.T01:intron | 50.0% |
| ! | GTAGCACCAATGGACTTCTC+TGG | + | Chr7:12100065-12100084 | MsG0780036700.01.T01:CDS | 50.0% |
| ! | TGCATCTGGATTGGGGGTTA+AGG | - | Chr7:12101417-12101436 | None:intergenic | 50.0% |
| !! | AGTCCATTGGTGCTACTAGG+AGG | - | Chr7:12100061-12100080 | None:intergenic | 50.0% |
| !! | CCGCACAATCCAGTTTTGTG+GGG | + | Chr7:12102404-12102423 | MsG0780036700.01.T01:intron | 50.0% |
| CAACCGAGTGGCAATGTCTG+GGG | + | Chr7:12101712-12101731 | MsG0780036700.01.T01:intron | 55.0% | |
| CGTGTGCAGCAGCAATGAAG+AGG | + | Chr7:12099553-12099572 | MsG0780036700.01.T01:CDS | 55.0% | |
| GGCTTCACGAATGGGGTTTC+AGG | + | Chr7:12099679-12099698 | MsG0780036700.01.T01:CDS | 55.0% | |
| TCACCCCAGACATTGCCACT+CGG | - | Chr7:12101718-12101737 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 12099528 | 12102995 | 12099528 | ID=MsG0780036700.01;Name=MsG0780036700.01 |
| Chr7 | mRNA | 12099528 | 12102995 | 12099528 | ID=MsG0780036700.01.T01;Parent=MsG0780036700.01;Name=MsG0780036700.01.T01;_AED=0.45;_eAED=0.46;_QI=0|1|0.66|1|1|1|3|159|590 |
| Chr7 | exon | 12099528 | 12100844 | 12099528 | ID=MsG0780036700.01.T01:exon:2470;Parent=MsG0780036700.01.T01 |
| Chr7 | exon | 12101995 | 12102144 | 12101995 | ID=MsG0780036700.01.T01:exon:2471;Parent=MsG0780036700.01.T01 |
| Chr7 | exon | 12102531 | 12102995 | 12102531 | ID=MsG0780036700.01.T01:exon:2472;Parent=MsG0780036700.01.T01 |
| Chr7 | CDS | 12099528 | 12100844 | 12099528 | ID=MsG0780036700.01.T01:cds;Parent=MsG0780036700.01.T01 |
| Chr7 | CDS | 12101995 | 12102144 | 12101995 | ID=MsG0780036700.01.T01:cds;Parent=MsG0780036700.01.T01 |
| Chr7 | CDS | 12102531 | 12102836 | 12102531 | ID=MsG0780036700.01.T01:cds;Parent=MsG0780036700.01.T01 |
| Chr7 | three_prime_UTR | 12102837 | 12102995 | 12102837 | ID=MsG0780036700.01.T01:three_prime_utr;Parent=MsG0780036700.01.T01 |
| Gene Sequence |
| Protein sequence |
