AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039305.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039305.01.T01 MTR_7g070510 94.866 448 20 2 1 446 1 447 0.0 851
MsG0780039305.01.T01 MTR_4g013295 57.297 370 134 6 1 368 1 348 1.82e-146 422
MsG0780039305.01.T01 MTR_7g021530 46.556 421 202 8 1 411 1 408 1.02e-120 358
MsG0780039305.01.T01 MTR_7g021530 49.367 395 182 8 1 383 42 430 4.06e-120 358
MsG0780039305.01.T01 MTR_7g080170 45.921 429 183 8 52 431 57 485 2.88e-119 357
MsG0780039305.01.T01 MTR_4g037470 43.341 413 195 9 56 435 62 468 1.49e-114 344
MsG0780039305.01.T01 MTR_4g037470 42.417 422 195 10 56 435 62 477 1.91e-111 337
MsG0780039305.01.T01 MTR_2g090190 44.203 414 188 8 56 431 56 464 5.66e-110 333
MsG0780039305.01.T01 MTR_7g021530 48.974 341 154 6 81 411 28 358 5.22e-104 313
MsG0780039305.01.T01 MTR_8g017240 51.118 313 132 5 52 363 47 339 5.04e-99 301
MsG0780039305.01.T01 MTR_7g112490 45.231 325 171 3 52 374 52 371 5.19e-99 301
MsG0780039305.01.T01 MTR_7g112490 45.231 325 171 3 52 374 70 389 8.36e-99 301
MsG0780039305.01.T01 MTR_1g083690 44.025 318 165 3 47 363 45 350 1.56e-98 299
MsG0780039305.01.T01 MTR_4g120410 46.302 311 150 4 60 367 60 356 1.25e-97 297
MsG0780039305.01.T01 MTR_2g435550 46.774 310 150 5 60 367 47 343 1.15e-95 292
MsG0780039305.01.T01 MTR_2g435550 46.774 310 150 5 60 367 61 357 1.42e-95 292
MsG0780039305.01.T01 MTR_7g021530 47.385 325 156 6 1 315 1 320 2.18e-92 282
MsG0780039305.01.T01 MTR_7g080170 44.149 376 161 8 105 431 2 377 3.41e-92 285
MsG0780039305.01.T01 MTR_7g021530 47.385 325 156 6 1 315 42 361 1.10e-91 282
MsG0780039305.01.T01 MTR_1g016620 44.984 309 157 3 59 367 37 332 4.13e-89 275
MsG0780039305.01.T01 MTR_2g435550 46.875 288 138 5 60 345 61 335 6.59e-88 273
MsG0780039305.01.T01 MTR_7g021530 43.673 245 123 6 1 235 1 240 4.74e-53 179
MsG0780039305.01.T01 MTR_7g021530 43.673 245 123 6 1 235 42 281 1.95e-52 179
MsG0780039305.01.T01 MTR_4g118340 27.796 313 162 6 60 344 47 323 3.14e-32 127
MsG0780039305.01.T01 MTR_2g020970 25.886 367 202 8 2 345 6 325 8.46e-28 114
MsG0780039305.01.T01 MTR_2g020970 25.886 367 202 8 2 345 6 325 2.37e-27 114
MsG0780039305.01.T01 MTR_6g087000 27.893 337 178 13 64 374 97 394 6.09e-27 114
MsG0780039305.01.T01 MTR_6g087000 27.893 337 178 13 64 374 97 394 1.04e-26 114
MsG0780039305.01.T01 MTR_3g105730 29.682 283 141 8 93 374 45 270 5.64e-25 103
MsG0780039305.01.T01 MTR_3g105730 29.474 285 143 8 91 374 65 292 6.15e-25 104
MsG0780039305.01.T01 MTR_5g009370 31.481 270 137 8 60 325 55 280 1.05e-24 104
MsG0780039305.01.T01 MTR_3g104710 31.469 286 139 13 71 353 269 500 1.03e-23 104
MsG0780039305.01.T01 MTR_1g014640 29.091 275 138 7 93 366 110 328 1.11e-23 101
MsG0780039305.01.T01 MTR_1g013400 29.091 275 138 7 93 366 110 328 1.11e-23 101
MsG0780039305.01.T01 MTR_3g068200 30.952 252 136 9 74 323 106 321 1.27e-22 99.4
MsG0780039305.01.T01 MTR_1g015110 31.636 275 130 11 91 342 290 529 1.28e-22 100
MsG0780039305.01.T01 MTR_4g125810 34.483 232 113 9 91 322 253 445 4.44e-21 95.9
MsG0780039305.01.T01 MTR_1g115570 27.857 280 137 11 91 368 126 342 1.45e-20 92.8
MsG0780039305.01.T01 MTR_8g102550 31.897 232 109 8 91 319 152 337 2.23e-20 93.2
MsG0780039305.01.T01 MTR_4g123080 29.054 296 150 10 64 342 60 312 3.04e-20 92.0
MsG0780039305.01.T01 MTR_4g123080 29.054 296 150 10 64 342 78 330 6.00e-20 91.7
MsG0780039305.01.T01 MTR_2g040500 31.004 229 138 9 91 318 267 476 3.49e-19 90.5
MsG0780039305.01.T01 MTR_5g080680 28.253 269 131 8 68 323 109 328 1.17e-18 87.8
MsG0780039305.01.T01 MTR_4g094542 38.272 162 84 6 180 340 202 348 2.21e-18 86.7
MsG0780039305.01.T01 MTR_2g033000 27.508 309 153 11 61 342 53 317 2.45e-18 86.7
MsG0780039305.01.T01 MTR_1g086350 28.352 261 135 8 91 342 102 319 4.57e-17 82.8
MsG0780039305.01.T01 MTR_1g086350 28.244 262 134 9 91 342 118 335 5.70e-17 82.8
MsG0780039305.01.T01 MTR_2g078760 37.821 156 81 6 187 341 98 238 6.41e-17 80.5
MsG0780039305.01.T01 MTR_6g081850 28.241 216 120 6 164 363 122 318 6.98e-17 81.6
MsG0780039305.01.T01 MTR_3g464650 26.087 322 176 11 1 322 15 274 1.63e-16 80.5
MsG0780039305.01.T01 MTR_2g078760 37.821 156 81 6 187 341 177 317 1.80e-16 80.5
MsG0780039305.01.T01 MTR_3g464700 28.736 261 135 10 62 322 89 298 4.20e-16 79.7
MsG0780039305.01.T01 MTR_5g071550 27.586 261 138 9 62 322 125 334 6.65e-16 79.3
MsG0780039305.01.T01 MTR_8g463130 28.136 295 152 12 55 341 24 266 7.73e-16 78.2
MsG0780039305.01.T01 MTR_3g074610 37.580 157 82 6 187 342 126 267 8.02e-16 77.8
MsG0780039305.01.T01 MTR_1g050520 25.581 301 176 10 64 363 391 644 8.58e-16 80.1
MsG0780039305.01.T01 MTR_1g086350 27.799 259 133 9 94 342 19 233 1.26e-15 77.4
MsG0780039305.01.T01 MTR_8g463130 27.682 289 150 12 61 341 1 238 1.33e-15 76.6
MsG0780039305.01.T01 MTR_4g094208 35.897 156 84 6 187 341 121 261 1.34e-15 77.4
MsG0780039305.01.T01 MTR_7g090530 25.464 377 200 15 57 391 40 377 2.77e-15 78.2
MsG0780039305.01.T01 MTR_2g008850 34.395 157 87 6 187 342 79 220 3.23e-15 75.5
MsG0780039305.01.T01 MTR_3g105880 25.077 323 190 10 45 341 13 309 5.60e-15 76.6
MsG0780039305.01.T01 MTR_1g028300 30.901 233 114 9 91 323 145 330 9.97e-15 75.9
MsG0780039305.01.T01 MTR_2g008850 34.395 157 87 6 187 342 125 266 1.11e-14 74.7
MsG0780039305.01.T01 MTR_5g063940 36.306 157 84 6 187 342 79 220 1.55e-14 73.2
MsG0780039305.01.T01 MTR_3g105880 25.249 301 177 9 45 323 13 287 2.65e-14 73.9
MsG0780039305.01.T01 MTR_5g063940 36.306 157 84 6 187 342 126 267 3.61e-14 73.2
MsG0780039305.01.T01 MTR_5g024340 26.937 271 116 8 91 342 124 331 5.00e-14 73.9
MsG0780039305.01.T01 MTR_3g091060 25.974 231 119 7 93 322 127 306 9.52e-14 72.8
MsG0780039305.01.T01 MTR_3g107880 25.784 287 145 10 91 367 63 291 3.58e-13 70.5
MsG0780039305.01.T01 MTR_3g107880 25.784 287 145 10 91 367 120 348 4.92e-13 70.9
MsG0780039305.01.T01 MTR_3g107880 25.784 287 145 10 91 367 121 349 5.23e-13 70.5
MsG0780039305.01.T01 MTR_7g060770 24.026 308 169 11 63 341 239 510 1.43e-12 70.1
MsG0780039305.01.T01 MTR_2g078760 40.625 128 60 6 187 313 177 289 2.10e-12 67.8
MsG0780039305.01.T01 MTR_4g007440 27.863 262 144 10 86 323 47 287 3.48e-12 68.2
MsG0780039305.01.T01 MTR_7g090550 24.501 351 177 12 90 391 69 380 1.79e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039305.01.T01 AT5G01700 50.938 373 145 4 1 367 1 341 7.80e-131 383
MsG0780039305.01.T01 AT5G01700 53.443 305 129 1 63 367 1 292 5.53e-121 356
MsG0780039305.01.T01 AT1G79630 42.991 428 191 6 56 430 63 490 5.37e-120 360
MsG0780039305.01.T01 AT1G16220 44.019 418 191 6 56 430 60 477 6.82e-120 359
MsG0780039305.01.T01 AT1G79630 42.991 428 191 6 56 430 59 486 8.71e-120 359
MsG0780039305.01.T01 AT5G36250 48.611 360 167 7 38 383 46 401 8.97e-117 349
MsG0780039305.01.T01 AT1G03590 44.527 402 194 6 56 430 56 455 8.73e-114 342
MsG0780039305.01.T01 AT5G36250 46.791 374 167 8 38 383 46 415 1.01e-112 339
MsG0780039305.01.T01 AT4G03415 45.274 402 188 8 63 436 70 467 3.58e-112 338
MsG0780039305.01.T01 AT4G03415 45.274 402 188 8 63 436 70 467 3.58e-112 338
MsG0780039305.01.T01 AT4G03415 45.274 402 188 8 63 436 70 467 3.58e-112 338
MsG0780039305.01.T01 AT3G02750 44.573 433 182 7 54 430 58 488 6.11e-112 338
MsG0780039305.01.T01 AT3G02750 44.573 433 182 7 54 430 58 488 6.11e-112 338
MsG0780039305.01.T01 AT1G79630 41.935 403 181 6 81 430 18 420 2.21e-108 327
MsG0780039305.01.T01 AT1G79630 41.935 403 181 6 81 430 18 420 2.21e-108 327
MsG0780039305.01.T01 AT3G02750 41.151 469 183 8 54 431 58 524 4.85e-104 319
MsG0780039305.01.T01 AT1G79630 49.315 292 123 4 164 430 89 380 1.50e-96 296
MsG0780039305.01.T01 AT1G79630 49.315 292 123 4 164 430 89 380 1.50e-96 296
MsG0780039305.01.T01 AT1G79630 49.315 292 123 4 164 430 89 380 1.50e-96 296
MsG0780039305.01.T01 AT1G79630 49.315 292 123 4 164 430 89 380 1.50e-96 296
MsG0780039305.01.T01 AT3G05640 44.660 309 153 3 56 363 58 349 5.47e-94 288
MsG0780039305.01.T01 AT3G05640 44.660 309 153 3 56 363 58 349 5.47e-94 288
MsG0780039305.01.T01 AT3G05640 44.660 309 153 3 56 363 58 349 5.47e-94 288
MsG0780039305.01.T01 AT5G27930 43.450 313 163 4 52 362 53 353 1.53e-92 285
MsG0780039305.01.T01 AT5G27930 43.450 313 163 4 52 362 53 353 1.53e-92 285
MsG0780039305.01.T01 AT3G16800 41.311 351 181 5 16 363 20 348 1.26e-88 274
MsG0780039305.01.T01 AT3G16800 41.311 351 181 5 16 363 20 348 1.26e-88 274
MsG0780039305.01.T01 AT3G16800 41.311 351 181 5 16 363 20 348 1.26e-88 274
MsG0780039305.01.T01 AT5G36250 47.241 290 138 6 38 313 46 334 5.06e-87 270
MsG0780039305.01.T01 AT3G16800 44.322 273 129 4 94 363 1 253 1.88e-74 234
MsG0780039305.01.T01 AT3G16800 44.322 273 129 4 94 363 1 253 1.88e-74 234
MsG0780039305.01.T01 AT5G27930 40.909 264 136 3 52 310 53 301 1.11e-72 232
MsG0780039305.01.T01 AT5G26010 40.708 339 173 6 33 367 16 330 3.29e-72 231
MsG0780039305.01.T01 AT4G32950 41.368 307 147 5 62 366 44 319 4.55e-71 228
MsG0780039305.01.T01 AT4G32950 41.833 251 113 5 62 310 44 263 3.80e-53 179
MsG0780039305.01.T01 AT3G16800 34.498 229 125 5 16 241 20 226 1.79e-35 131
MsG0780039305.01.T01 AT3G06270 27.986 293 155 6 73 345 70 326 1.34e-30 121
MsG0780039305.01.T01 AT2G20050 27.160 324 172 10 64 364 116 398 1.17e-28 120
MsG0780039305.01.T01 AT2G20050 27.160 324 172 10 64 364 116 398 1.28e-28 119
MsG0780039305.01.T01 AT4G31750 27.719 285 146 9 85 366 56 283 1.49e-23 100
MsG0780039305.01.T01 AT4G31750 27.719 285 146 9 85 366 56 283 2.39e-23 100
MsG0780039305.01.T01 AT4G31750 27.719 285 146 9 85 366 56 283 2.39e-23 100
MsG0780039305.01.T01 AT5G24940 30.159 252 126 6 91 342 64 265 1.60e-22 100
MsG0780039305.01.T01 AT1G72770 32.780 241 121 8 91 322 238 446 4.60e-22 99.0
MsG0780039305.01.T01 AT1G72770 32.780 241 121 8 91 322 238 446 4.60e-22 99.0
MsG0780039305.01.T01 AT1G72770 32.780 241 121 8 91 322 238 446 4.60e-22 99.0
MsG0780039305.01.T01 AT5G10740 30.435 253 124 7 91 342 64 265 8.30e-22 96.7
MsG0780039305.01.T01 AT5G10740 30.435 253 124 7 91 342 64 265 8.30e-22 96.7
MsG0780039305.01.T01 AT1G07430 37.288 177 83 5 160 323 193 354 1.87e-20 93.6
MsG0780039305.01.T01 AT5G59220 31.452 248 108 9 88 323 145 342 1.30e-19 90.9
MsG0780039305.01.T01 AT5G57050 31.466 232 119 7 91 322 120 311 2.35e-19 89.7
MsG0780039305.01.T01 AT5G57050 31.466 232 119 7 91 322 160 351 2.48e-19 90.1
MsG0780039305.01.T01 AT1G17550 29.752 242 120 8 91 318 237 442 3.92e-19 90.1
MsG0780039305.01.T01 AT1G17550 29.752 242 120 8 91 318 237 442 3.92e-19 90.1
MsG0780039305.01.T01 AT4G26080 32.895 228 111 9 91 318 172 357 1.00e-18 88.6
MsG0780039305.01.T01 AT1G43900 31.076 251 120 9 89 338 152 350 1.82e-18 87.0
MsG0780039305.01.T01 AT1G67820 26.019 319 180 9 63 380 87 350 3.07e-18 86.7
MsG0780039305.01.T01 AT2G34740 32.663 199 111 8 166 363 159 335 3.76e-18 85.9
MsG0780039305.01.T01 AT1G67820 26.019 319 180 9 63 380 123 386 3.98e-18 86.7
MsG0780039305.01.T01 AT3G11410 35.326 184 83 6 160 322 173 341 1.13e-17 85.1
MsG0780039305.01.T01 AT5G51760 33.168 202 108 6 153 342 155 341 1.64e-17 84.3
MsG0780039305.01.T01 AT5G02760 26.074 326 159 12 91 375 72 356 1.75e-17 84.3
MsG0780039305.01.T01 AT4G28400 30.068 296 145 15 55 341 3 245 1.82e-17 82.4
MsG0780039305.01.T01 AT5G51760 33.168 202 108 6 153 342 185 371 2.29e-17 84.3
MsG0780039305.01.T01 AT4G28400 29.054 296 148 13 55 341 25 267 4.19e-17 81.6
MsG0780039305.01.T01 AT1G78200 33.146 178 105 5 166 342 59 223 6.77e-17 80.5
MsG0780039305.01.T01 AT1G78200 33.146 178 105 5 166 342 59 223 6.77e-17 80.5
MsG0780039305.01.T01 AT3G17250 27.559 254 124 8 89 329 156 362 7.35e-17 82.8
MsG0780039305.01.T01 AT2G40180 28.179 291 154 10 60 342 128 371 8.16e-17 82.4
MsG0780039305.01.T01 AT1G78200 33.146 178 105 5 166 342 104 268 9.28e-17 80.9
MsG0780039305.01.T01 AT1G78200 33.146 178 105 5 166 342 104 268 9.28e-17 80.9
MsG0780039305.01.T01 AT1G78200 33.146 178 105 5 166 342 104 268 9.28e-17 80.9
MsG0780039305.01.T01 AT2G29380 35.165 182 77 9 160 322 150 309 1.11e-16 81.6
MsG0780039305.01.T01 AT5G53140 27.626 257 132 9 87 340 126 331 1.47e-16 82.0
MsG0780039305.01.T01 AT5G53140 27.626 257 132 9 87 340 126 331 1.47e-16 82.0
MsG0780039305.01.T01 AT2G25620 27.063 303 155 11 75 367 114 360 2.62e-16 80.9
MsG0780039305.01.T01 AT2G25620 27.063 303 155 11 75 367 114 360 2.62e-16 80.9
MsG0780039305.01.T01 AT2G20630 28.185 259 120 10 91 341 63 263 3.33e-16 79.0
MsG0780039305.01.T01 AT1G07160 28.352 261 138 9 62 322 124 335 3.69e-16 80.5
MsG0780039305.01.T01 AT3G62260 28.571 238 123 8 91 323 27 222 4.71e-16 79.0
MsG0780039305.01.T01 AT2G20630 28.516 256 117 10 94 341 66 263 6.77e-16 78.6
MsG0780039305.01.T01 AT3G62260 28.571 238 123 8 91 323 116 311 9.75e-16 79.0
MsG0780039305.01.T01 AT3G62260 28.571 238 123 8 91 323 117 312 9.91e-16 79.0
MsG0780039305.01.T01 AT1G18030 27.650 217 122 5 163 363 151 348 3.13e-15 77.0
MsG0780039305.01.T01 AT1G48040 28.862 246 125 8 91 329 116 318 7.88e-15 76.3
MsG0780039305.01.T01 AT2G30020 27.203 261 141 10 62 322 141 352 1.62e-14 75.5
MsG0780039305.01.T01 AT1G34750 36.709 158 82 6 187 342 126 267 2.10e-14 73.9
MsG0780039305.01.T01 AT1G34750 36.709 158 82 6 187 342 126 267 2.10e-14 73.9
MsG0780039305.01.T01 AT1G34750 36.709 158 82 6 187 342 126 267 2.10e-14 73.9
MsG0780039305.01.T01 AT2G40860 30.102 196 115 8 170 363 375 550 2.91e-14 75.5
MsG0780039305.01.T01 AT2G40860 32.692 156 89 6 170 323 473 614 4.87e-14 74.7
MsG0780039305.01.T01 AT2G40860 32.258 155 91 5 170 323 473 614 5.80e-14 74.7
MsG0780039305.01.T01 AT2G34740 31.953 169 98 7 166 333 173 325 2.12e-13 71.2
MsG0780039305.01.T01 AT2G34740 31.953 169 98 7 166 333 155 307 2.51e-13 70.9
MsG0780039305.01.T01 AT3G15260 35.256 156 85 6 187 341 133 273 3.45e-13 70.5
MsG0780039305.01.T01 AT3G15260 35.256 156 85 6 187 341 133 273 3.45e-13 70.5
MsG0780039305.01.T01 AT4G31860 26.562 320 185 13 45 341 13 305 3.80e-13 70.9
MsG0780039305.01.T01 AT4G31860 27.815 302 168 13 45 323 13 287 3.85e-13 70.1
MsG0780039305.01.T01 AT1G22280 35.669 157 85 6 187 342 125 266 1.10e-12 68.6
MsG0780039305.01.T01 AT1G22280 35.669 157 85 6 187 342 131 272 1.19e-12 68.6
MsG0780039305.01.T01 AT3G51470 24.627 268 141 10 64 323 76 290 5.24e-12 67.4
MsG0780039305.01.T01 AT3G51470 24.627 268 141 10 64 323 32 246 7.34e-12 66.6
MsG0780039305.01.T01 AT1G18030 28.221 163 92 3 163 313 151 300 7.57e-12 66.6
MsG0780039305.01.T01 AT2G25070 30.909 165 87 6 186 341 159 305 9.21e-12 66.6
MsG0780039305.01.T01 AT2G25070 30.909 165 87 6 186 341 159 305 9.21e-12 66.6
MsG0780039305.01.T01 AT1G34750 37.681 138 66 7 187 322 126 245 4.58e-11 63.2

Find 116 sgRNAs with CRISPR-Local

Find 188 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCTAAAATGTTGTATATTT+AGG 0.180151 7:-61728180 MsG0780039305.01.T01:three_prime_UTR
TTTGCTGCTGTTGACTTTCT+TGG 0.181729 7:+61728583 None:intergenic
CCAGTTGATAGTTGGAAATT+TGG 0.206532 7:-61729470 MsG0780039305.01.T01:CDS
TTGAAGAATTTAGAACTTAT+TGG 0.221539 7:-61728142 MsG0780039305.01.T01:three_prime_UTR
GCAAGATGAATTTGTTGTTT+TGG 0.234194 7:-61729081 MsG0780039305.01.T01:CDS
CAATCATCTAAGCACCTTAA+TGG 0.234478 7:-61728250 MsG0780039305.01.T01:CDS
CAACAGCCACCCATGTTTCT+TGG 0.244069 7:+61730747 None:intergenic
GGAAGGAAGGGTGGGAATTA+AGG 0.256545 7:+61730826 None:intergenic
TGAAGAATTTAGAACTTATT+GGG 0.257624 7:-61728141 MsG0780039305.01.T01:three_prime_UTR
AATGCCTTCAACTTCCATTA+AGG 0.307538 7:+61728236 None:intergenic
GCTATTGATAACATTGATAA+TGG 0.318337 7:+61727942 None:intergenic
ACCAAGATTCAATGACTGTT+TGG 0.326044 7:-61730521 MsG0780039305.01.T01:CDS
CAGTTGATAGTTGGAAATTT+GGG 0.326425 7:-61729469 MsG0780039305.01.T01:CDS
AACCGGATGTGTACAGAATA+TGG 0.329139 7:-61729217 MsG0780039305.01.T01:CDS
ACTATCTGAAGCAATCAAAA+TGG 0.340437 7:-61729886 MsG0780039305.01.T01:CDS
TCTGAAATCGTTTGATGAAA+TGG 0.343971 7:-61729742 MsG0780039305.01.T01:CDS
CCAAGATTCAATGACTGTTT+GGG 0.365877 7:-61730520 MsG0780039305.01.T01:CDS
GATTGAGAATGTGATAAAAT+AGG 0.372960 7:+61728463 None:intergenic
AGCTGTAGCTTTAATTAAAC+AGG 0.381379 7:-61729667 MsG0780039305.01.T01:intron
ACAACATATCCCTTGCTTCA+TGG 0.386921 7:-61729776 MsG0780039305.01.T01:CDS
CCCAAACAGTCATTGAATCT+TGG 0.388360 7:+61730520 None:intergenic
CAATACTTACTTGGAATATC+CGG 0.392328 7:+61729373 None:intergenic
GGAGCAATGGTTAGATTAAG+AGG 0.393042 7:-61730594 MsG0780039305.01.T01:CDS
TTAGCTATGTCAAGAGCCTT+TGG 0.396496 7:-61729170 MsG0780039305.01.T01:CDS
AAATCAACGGTAAGTTGAAC+AGG 0.405496 7:+61729400 None:intergenic
GGTAAATAATTAGTTAATGA+TGG 0.415860 7:+61727963 None:intergenic
GTCTTCTGTGGCGTGTTTGA+CGG 0.416167 7:-61729966 MsG0780039305.01.T01:CDS
CTCATATTTCTAGCAAGCCT+TGG 0.424591 7:+61728280 None:intergenic
AACAACAAATTCATCTTGCT+TGG 0.431974 7:+61729085 None:intergenic
GAAGACAATGAAACTGTTGC+TGG 0.432915 7:-61728379 MsG0780039305.01.T01:CDS
ACTTACCGTTGATTTGAAAC+CGG 0.436160 7:-61729392 MsG0780039305.01.T01:CDS
ATTAGCATCATAGTATTTGT+TGG 0.436523 7:+61729851 None:intergenic
CAACATATCCCTTGCTTCAT+GGG 0.437188 7:-61729775 MsG0780039305.01.T01:CDS
CAGGGTGACCAGTTGATAGT+TGG 0.439596 7:-61729478 MsG0780039305.01.T01:CDS
AATTTAGAACTTATTGGGGT+TGG 0.445541 7:-61728136 MsG0780039305.01.T01:three_prime_UTR
CAGGACTATGCTGGAGAAGA+AGG 0.456514 7:-61729993 MsG0780039305.01.T01:CDS
CCAAATTTCCAACTATCAAC+TGG 0.463615 7:+61729470 None:intergenic
ATGCCTGATGATGACTGTCC+TGG 0.467938 7:-61729194 MsG0780039305.01.T01:CDS
GAAACTGTTGCTGGAAAAGT+TGG 0.469501 7:-61728370 MsG0780039305.01.T01:CDS
ATCATCAAGAAACAAGCATA+TGG 0.471604 7:+61728489 None:intergenic
GCCTGGATGTATAAGTATCC+TGG 0.473714 7:-61728535 MsG0780039305.01.T01:CDS
ACTCTGCCTCCTCCTCCTCT+AGG 0.475827 7:+61730708 None:intergenic
GAAGAATGGAAAGCTCTTGA+AGG 0.479840 7:-61728334 MsG0780039305.01.T01:CDS
GAATCTTTAGCTGTGAAGGA+AGG 0.481881 7:-61729259 MsG0780039305.01.T01:CDS
TTATACCTCAAAAGATGTAA+TGG 0.487329 7:-61728014 MsG0780039305.01.T01:three_prime_UTR
CTCGTGCAGTTCTTTGCACA+AGG 0.487423 7:-61729441 MsG0780039305.01.T01:CDS
AATCCAGGACAGTCATCATC+AGG 0.497520 7:+61729191 None:intergenic
TGGAAAAGTTGGAGTGGAAC+TGG 0.501997 7:-61728359 MsG0780039305.01.T01:CDS
GAAAGAAACATGCAAAGAGT+TGG 0.505537 7:+61730859 None:intergenic
ATCCATATTCTGTACACATC+CGG 0.505921 7:+61729215 None:intergenic
TAATATTTGTGAAGGAAGGA+AGG 0.505957 7:+61730813 None:intergenic
TCAAGAATCTTTAGCTGTGA+AGG 0.508129 7:-61729263 MsG0780039305.01.T01:CDS
TTTCGCCGCAGATGAAGAAC+CGG 0.510296 7:-61729234 MsG0780039305.01.T01:CDS
TGTGGCGTGTTTGACGGTCA+TGG 0.512054 7:-61729960 MsG0780039305.01.T01:CDS
TTCCTCAATGTCTTATAAGA+AGG 0.512189 7:+61727986 None:intergenic
AAAATTTAAATTTAATGATG+AGG 0.514871 7:-61728096 MsG0780039305.01.T01:three_prime_UTR
GGAATAATATTTGTGAAGGA+AGG 0.516144 7:+61730809 None:intergenic
GTTGAAACCGAGGTGAATGA+TGG 0.518422 7:-61730687 MsG0780039305.01.T01:CDS
AAATGGATGATCATCTTGCT+CGG 0.523245 7:-61729725 MsG0780039305.01.T01:CDS
ATATATTATCAGGACTATGC+TGG 0.527095 7:-61730002 MsG0780039305.01.T01:intron
TAAAGCGCGCTGTTAAAGCC+TGG 0.527207 7:-61728552 MsG0780039305.01.T01:CDS
ATTTGTGAAGGAAGGAAGGG+TGG 0.530774 7:+61730817 None:intergenic
TTTGACGGTCATGGTCCTCT+AGG 0.530863 7:-61729951 MsG0780039305.01.T01:CDS
GAAGAATTTAGAACTTATTG+GGG 0.536412 7:-61728140 MsG0780039305.01.T01:three_prime_UTR
GAGCAATGGTTAGATTAAGA+GGG 0.539562 7:-61730593 MsG0780039305.01.T01:CDS
AGCACCTTAATGGAAGTTGA+AGG 0.541332 7:-61728240 MsG0780039305.01.T01:exon
ATTCAATATCAAAACTTCCA+AGG 0.542466 7:-61728297 MsG0780039305.01.T01:CDS
AACATCCTTCCCATGAAGCA+AGG 0.545861 7:+61729766 None:intergenic
TGCAAAGAGTTGGAAGAGAC+AGG 0.547832 7:+61730869 None:intergenic
AATCTTTAGCTGTGAAGGAA+GGG 0.549092 7:-61729258 MsG0780039305.01.T01:CDS
GATTGCTTCAGATAGTTTCG+AGG 0.550025 7:+61729893 None:intergenic
TGTTGATGCGGTTACTATTG+TGG 0.552058 7:+61729796 None:intergenic
ATATCCCTTGCTTCATGGGA+AGG 0.553019 7:-61729771 MsG0780039305.01.T01:CDS
GAGTGGAACTGGATGAAGAA+TGG 0.555708 7:-61728348 MsG0780039305.01.T01:CDS
TGCCTTCTTATAAGACATTG+AGG 0.556688 7:-61727988 MsG0780039305.01.T01:three_prime_UTR
GTGGACATTGTCAAAATTGT+CGG 0.556822 7:+61729818 None:intergenic
GTTGCTCCTAGAGGAGGAGG+AGG 0.558281 7:-61730714 MsG0780039305.01.T01:CDS
TCCAGGATACTTATACATCC+AGG 0.559238 7:+61728534 None:intergenic
GCTCTTGACATAGCTAATCC+AGG 0.563331 7:+61729176 None:intergenic
AATGGATGATCATCTTGCTC+GGG 0.566783 7:-61729724 MsG0780039305.01.T01:CDS
ACGTTGTCTTCCAAGAAACA+TGG 0.567860 7:-61730757 MsG0780039305.01.T01:exon
TATACACAACAAGGTATGAA+AGG 0.568417 7:-61730549 MsG0780039305.01.T01:CDS
AGACAGGAACATGGAAGAAG+TGG 0.568550 7:+61730885 None:intergenic
AATATCCGGTTTCAAATCAA+CGG 0.569234 7:+61729387 None:intergenic
AATCAAAATGGCACAACAGA+AGG 0.572079 7:-61729874 MsG0780039305.01.T01:CDS
AGTTGGAAGAGACAGGAACA+TGG 0.574600 7:+61730876 None:intergenic
GATGTTGCTCCTAGAGGAGG+AGG 0.575951 7:-61730717 MsG0780039305.01.T01:CDS
TTGTGATAAGCTCTAATAAG+TGG 0.579319 7:-61728215 MsG0780039305.01.T01:three_prime_UTR
GCTGTCACGTATCAAAATGA+TGG 0.579947 7:-61730615 MsG0780039305.01.T01:CDS
TTTGTGAAGGAAGGAAGGGT+GGG 0.585543 7:+61730818 None:intergenic
GAATGGAATAATATTTGTGA+AGG 0.592762 7:+61730805 None:intergenic
AAGAATGGAAAGCTCTTGAA+GGG 0.594451 7:-61728333 MsG0780039305.01.T01:CDS
AGGAGGCAGAGTTGAAACCG+AGG 0.596046 7:-61730697 MsG0780039305.01.T01:CDS
GTATCAAAATGATGGAGCAA+TGG 0.597945 7:-61730607 MsG0780039305.01.T01:CDS
CACGATGTTGCTCCTAGAGG+AGG 0.604795 7:-61730720 MsG0780039305.01.T01:CDS
CACATCCGGTTCTTCATCTG+CGG 0.614367 7:+61729229 None:intergenic
ACATCCTTCCCATGAAGCAA+GGG 0.615226 7:+61729767 None:intergenic
ATTGCTTCAGATAGTTTCGA+GGG 0.615251 7:+61729894 None:intergenic
CAAGGGATATGTTGTTGATG+CGG 0.616397 7:+61729784 None:intergenic
AATATTTGTGAAGGAAGGAA+GGG 0.616617 7:+61730814 None:intergenic
CTATGCTGGAGAAGAAGGCA+TGG 0.621989 7:-61729988 MsG0780039305.01.T01:CDS
AACACTGATAGCTATTGCAG+TGG 0.622757 7:-61729696 MsG0780039305.01.T01:CDS
CGTTGTCTTCCAAGAAACAT+GGG 0.631651 7:-61730756 MsG0780039305.01.T01:exon
TCGTGCAGTTCTTTGCACAA+GGG 0.632091 7:-61729440 MsG0780039305.01.T01:CDS
AGATTCAATGACTGTTTGGG+AGG 0.633406 7:-61730517 MsG0780039305.01.T01:intron
ATATTCTCCATCATTCACCT+CGG 0.635736 7:+61730680 None:intergenic
ACACATCTGGTGATGCAATG+AGG 0.636186 7:+61729123 None:intergenic
GAAGAAGGCATGGTCTTCTG+TGG 0.636280 7:-61729978 MsG0780039305.01.T01:CDS
TGCGAAACTTTGTGTCCTAG+AGG 0.636288 7:+61729936 None:intergenic
GTTTCAATGTATACACAACA+AGG 0.640908 7:-61730558 MsG0780039305.01.T01:CDS
AGGAACATGGAAGAAGTGGT+TGG 0.642642 7:+61730889 None:intergenic
TGATGCGGTTACTATTGTGG+TGG 0.653844 7:+61729799 None:intergenic
TGTTGCTGGAAAAGTTGGAG+TGG 0.662878 7:-61728365 MsG0780039305.01.T01:CDS
AGCCACGATGTTGCTCCTAG+AGG 0.667751 7:-61730723 MsG0780039305.01.T01:CDS
CTCCTCTAGGAGCAACATCG+TGG 0.679321 7:+61730721 None:intergenic
TGTCTTCCAAGAAACATGGG+TGG 0.731949 7:-61730753 MsG0780039305.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTTAAATTTAATGATG+AGG - Chr7:61730723-61730742 MsG0780039305.01.T01:CDS 10.0%
!! AATGATTAATCAAATTGAAA+TGG + Chr7:61728497-61728516 None:intergenic 15.0%
!! AATTATGTGATTTAATCTTA+TGG - Chr7:61728717-61728736 MsG0780039305.01.T01:intron 15.0%
!!! TAATTTTATCAATGTTTTTC+AGG - Chr7:61729526-61729545 MsG0780039305.01.T01:intron 15.0%
!!! TTCATTTTTTTAACAGATAT+GGG - Chr7:61730169-61730188 MsG0780039305.01.T01:intron 15.0%
!!! TTTCATTTTTTTAACAGATA+TGG - Chr7:61730168-61730187 MsG0780039305.01.T01:intron 15.0%
!! AACCTTAGAATTAAAAATCA+AGG + Chr7:61729806-61729825 None:intergenic 20.0%
!! AATCTTGACAATTACATTAT+TGG + Chr7:61728574-61728593 None:intergenic 20.0%
!! ACCTAAAATGTTGTATATTT+AGG - Chr7:61730639-61730658 MsG0780039305.01.T01:CDS 20.0%
!! ACCTTAGAATTAAAAATCAA+GGG + Chr7:61729805-61729824 None:intergenic 20.0%
!! ATCTGTTAAAAAAATGAAAC+CGG + Chr7:61730167-61730186 None:intergenic 20.0%
!! GGTAAATAATTAGTTAATGA+TGG + Chr7:61730859-61730878 None:intergenic 20.0%
!! TGGACTTTATTATTAGATTA+TGG - Chr7:61728737-61728756 MsG0780039305.01.T01:intron 20.0%
!!! ACCTAAATATACAACATTTT+AGG + Chr7:61730643-61730662 None:intergenic 20.0%
!!! AGTTTGATGAATTTTTGTTT+TGG - Chr7:61728400-61728419 MsG0780039305.01.T01:CDS 20.0%
!!! AGTTTTTCACTCAAATATTT+AGG - Chr7:61730765-61730784 MsG0780039305.01.T01:five_prime_UTR 20.0%
!!! GTTTTTCACTCAAATATTTA+GGG - Chr7:61730766-61730785 MsG0780039305.01.T01:five_prime_UTR 20.0%
!!! TGAAGAATTTAGAACTTATT+GGG - Chr7:61730678-61730697 MsG0780039305.01.T01:CDS 20.0%
!!! TTGAAGAATTTAGAACTTAT+TGG - Chr7:61730677-61730696 MsG0780039305.01.T01:CDS 20.0%
!!! TTTTTCACTCAAATATTTAG+GGG - Chr7:61730767-61730786 MsG0780039305.01.T01:five_prime_UTR 20.0%
!!! TTTTTTCAATCAATTCTTGT+GGG - Chr7:61728438-61728457 MsG0780039305.01.T01:CDS 20.0%
!!! TTTTTTTCAATCAATTCTTG+TGG - Chr7:61728437-61728456 MsG0780039305.01.T01:CDS 20.0%
! AAATTACAACTAGATCTGAT+AGG + Chr7:61729512-61729531 None:intergenic 25.0%
! AATTGATGAAATGTAACATG+TGG - Chr7:61728771-61728790 MsG0780039305.01.T01:intron 25.0%
! ATTAGCATCATAGTATTTGT+TGG + Chr7:61728971-61728990 None:intergenic 25.0%
! ATTCAATATCAAAACTTCCA+AGG - Chr7:61730522-61730541 MsG0780039305.01.T01:CDS 25.0%
! CATAATTCTATGATTATTGC+TGG + Chr7:61728704-61728723 None:intergenic 25.0%
! GAATGGAATAATATTTGTGA+AGG + Chr7:61728017-61728036 None:intergenic 25.0%
! GATTGAGAATGTGATAAAAT+AGG + Chr7:61730359-61730378 None:intergenic 25.0%
! TAACATAACAATTGTGTATC+CGG + Chr7:61730075-61730094 None:intergenic 25.0%
! TATTTAGGTGCAAAAAAATG+AGG - Chr7:61730654-61730673 MsG0780039305.01.T01:CDS 25.0%
! TCTAAAAAATTTAGCTGTGT+CGG + Chr7:61729903-61729922 None:intergenic 25.0%
! TGGATATGCTATATATTATC+AGG - Chr7:61728807-61728826 MsG0780039305.01.T01:intron 25.0%
! TTACATAAGGTAAGAAATCA+TGG - Chr7:61729191-61729210 MsG0780039305.01.T01:CDS 25.0%
! TTATACCTCAAAAGATGTAA+TGG - Chr7:61730805-61730824 MsG0780039305.01.T01:five_prime_UTR 25.0%
! TTGATATACCAATACTTACT+TGG + Chr7:61729458-61729477 None:intergenic 25.0%
!! ATTTTTCTGTAAAACACATC+TGG + Chr7:61729712-61729731 None:intergenic 25.0%
!! GAAGAATTTAGAACTTATTG+GGG - Chr7:61730679-61730698 MsG0780039305.01.T01:CDS 25.0%
!! GACTTTTGTCTAAAAGATTA+TGG - Chr7:61729673-61729692 MsG0780039305.01.T01:CDS 25.0%
!! GCTATTGATAACATTGATAA+TGG + Chr7:61730880-61730899 None:intergenic 25.0%
!! TTGAGGTATAAGCAAATTTT+TGG + Chr7:61730796-61730815 None:intergenic 25.0%
!!! ACCCTTGATTTTTAATTCTA+AGG - Chr7:61729801-61729820 MsG0780039305.01.T01:CDS 25.0%
!!! ATTTTAGTAGTAACTCCTAA+AGG + Chr7:61728629-61728648 None:intergenic 25.0%
!!! TGATGAATTTTTGTTTTGGT+TGG - Chr7:61728404-61728423 MsG0780039305.01.T01:CDS 25.0%
AACAACAAATTCATCTTGCT+TGG + Chr7:61729737-61729756 None:intergenic 30.0%
AATATCCGGTTTCAAATCAA+CGG + Chr7:61729435-61729454 None:intergenic 30.0%
AATATTTGTGAAGGAAGGAA+GGG + Chr7:61728008-61728027 None:intergenic 30.0%
ATATATTATCAGGACTATGC+TGG - Chr7:61728817-61728836 MsG0780039305.01.T01:intron 30.0%
ATCATCAAGAAACAAGCATA+TGG + Chr7:61730333-61730352 None:intergenic 30.0%
CAACCATTTATGATACCTTT+AGG - Chr7:61728611-61728630 MsG0780039305.01.T01:CDS 30.0%
CAATACTTACTTGGAATATC+CGG + Chr7:61729449-61729468 None:intergenic 30.0%
CTTACCTTATGTAAGTTACA+CGG + Chr7:61729185-61729204 None:intergenic 30.0%
GGAATAATATTTGTGAAGGA+AGG + Chr7:61728013-61728032 None:intergenic 30.0%
GTTTCAATGTATACACAACA+AGG - Chr7:61728261-61728280 MsG0780039305.01.T01:CDS 30.0%
TAATATTTGTGAAGGAAGGA+AGG + Chr7:61728009-61728028 None:intergenic 30.0%
TATACACAACAAGGTATGAA+AGG - Chr7:61728270-61728289 MsG0780039305.01.T01:CDS 30.0%
TTAAGAAAGAAATCCATGCA+TGG + Chr7:61730114-61730133 None:intergenic 30.0%
TTACCAGAAGAGAAGAAAAA+TGG + Chr7:61728043-61728062 None:intergenic 30.0%
TTCCTCAATGTCTTATAAGA+AGG + Chr7:61730836-61730855 None:intergenic 30.0%
! AATTTAGAACTTATTGGGGT+TGG - Chr7:61730683-61730702 MsG0780039305.01.T01:CDS 30.0%
! ACTATCTGAAGCAATCAAAA+TGG - Chr7:61728933-61728952 MsG0780039305.01.T01:intron 30.0%
! TACTTATTGACTATGAAGCA+CGG - Chr7:61729842-61729861 MsG0780039305.01.T01:CDS 30.0%
! TCTGAAATCGTTTGATGAAA+TGG - Chr7:61729077-61729096 MsG0780039305.01.T01:CDS 30.0%
! TTGTGATAAGCTCTAATAAG+TGG - Chr7:61730604-61730623 MsG0780039305.01.T01:CDS 30.0%
! TTTTAGACAAAAGTCTCCAA+AGG + Chr7:61729668-61729687 None:intergenic 30.0%
!! ACTCCTAAAGGTATCATAAA+TGG + Chr7:61728617-61728636 None:intergenic 30.0%
!! AGCTGTAGCTTTAATTAAAC+AGG - Chr7:61729152-61729171 MsG0780039305.01.T01:CDS 30.0%
!! CAGTTGATAGTTGGAAATTT+GGG - Chr7:61729350-61729369 MsG0780039305.01.T01:intron 30.0%
!!! GCAAGATGAATTTGTTGTTT+TGG - Chr7:61729738-61729757 MsG0780039305.01.T01:CDS 30.0%
!!! TTTGTTTTGGTTGGTTTTCT+TGG - Chr7:61728413-61728432 MsG0780039305.01.T01:CDS 30.0%
AAATGGATGATCATCTTGCT+CGG - Chr7:61729094-61729113 MsG0780039305.01.T01:CDS 35.0%
AAGAATGGAAAGCTCTTGAA+GGG - Chr7:61730486-61730505 MsG0780039305.01.T01:intron 35.0%
AATCAAAATGGCACAACAGA+AGG - Chr7:61728945-61728964 MsG0780039305.01.T01:intron 35.0%
AATCTTTAGCTGTGAAGGAA+GGG - Chr7:61729561-61729580 MsG0780039305.01.T01:intron 35.0%
AATGCCTTCAACTTCCATTA+AGG + Chr7:61730586-61730605 None:intergenic 35.0%
ACCAAGATTCAATGACTGTT+TGG - Chr7:61728298-61728317 MsG0780039305.01.T01:CDS 35.0%
ATATTCTCCATCATTCACCT+CGG + Chr7:61728142-61728161 None:intergenic 35.0%
ATCCATATTCTGTACACATC+CGG + Chr7:61729607-61729626 None:intergenic 35.0%
ATTGCTTCAGATAGTTTCGA+GGG + Chr7:61728928-61728947 None:intergenic 35.0%
CAATCATCTAAGCACCTTAA+TGG - Chr7:61730569-61730588 MsG0780039305.01.T01:CDS 35.0%
CAGAAGAGAAGAAAAATGGA+TGG + Chr7:61728039-61728058 None:intergenic 35.0%
CATGTGGCTATGATTAATGT+TGG - Chr7:61728787-61728806 MsG0780039305.01.T01:intron 35.0%
CCAAATTTCCAACTATCAAC+TGG + Chr7:61729352-61729371 None:intergenic 35.0%
CCAAGATTCAATGACTGTTT+GGG - Chr7:61728299-61728318 MsG0780039305.01.T01:CDS 35.0%
CGGATATTCCAAGTAAGTAT+TGG - Chr7:61729447-61729466 MsG0780039305.01.T01:CDS 35.0%
CGTTTACCCTATAAATTGCA+GGG - Chr7:61729323-61729342 MsG0780039305.01.T01:intron 35.0%
GAAAGAAACATGCAAAGAGT+TGG + Chr7:61727963-61727982 None:intergenic 35.0%
GAGAAGAAAAATGGATGGAA+TGG + Chr7:61728034-61728053 None:intergenic 35.0%
GAGCAATGGTTAGATTAAGA+GGG - Chr7:61728226-61728245 MsG0780039305.01.T01:exon 35.0%
GTAACCGTGTAACTTACATA+AGG - Chr7:61729178-61729197 MsG0780039305.01.T01:CDS 35.0%
GTGGACATTGTCAAAATTGT+CGG + Chr7:61729004-61729023 None:intergenic 35.0%
TCAAGAATCTTTAGCTGTGA+AGG - Chr7:61729556-61729575 MsG0780039305.01.T01:intron 35.0%
TGCCTTCTTATAAGACATTG+AGG - Chr7:61730831-61730850 MsG0780039305.01.T01:five_prime_UTR 35.0%
! AAATCAACGGTAAGTTGAAC+AGG + Chr7:61729422-61729441 None:intergenic 35.0%
! CATAGCCATTACATCTTTTG+AGG + Chr7:61730813-61730832 None:intergenic 35.0%
! CTTCATTGATAGCATTCTCT+TGG - Chr7:61728650-61728669 MsG0780039305.01.T01:intron 35.0%
! GTATCAAAATGATGGAGCAA+TGG - Chr7:61728212-61728231 MsG0780039305.01.T01:three_prime_UTR 35.0%
! TTTAGAGTTTGAACCATGCA+TGG - Chr7:61730098-61730117 MsG0780039305.01.T01:intron 35.0%
!! ACTTACCGTTGATTTGAAAC+CGG - Chr7:61729427-61729446 MsG0780039305.01.T01:CDS 35.0%
!! CATCCATTTTTCTTCTCTTC+TGG - Chr7:61728037-61728056 MsG0780039305.01.T01:three_prime_UTR 35.0%
!! CCAGTTGATAGTTGGAAATT+TGG - Chr7:61729349-61729368 MsG0780039305.01.T01:intron 35.0%
!!! TTGTTGTTTTGGCAACTGAT+GGG - Chr7:61729749-61729768 MsG0780039305.01.T01:CDS 35.0%
!!! TTTGTTGTTTTGGCAACTGA+TGG - Chr7:61729748-61729767 MsG0780039305.01.T01:CDS 35.0%
AACACTGATAGCTATTGCAG+TGG - Chr7:61729123-61729142 MsG0780039305.01.T01:CDS 40.0%
AACCGGATGTGTACAGAATA+TGG - Chr7:61729602-61729621 MsG0780039305.01.T01:intron 40.0%
AATGGATGATCATCTTGCTC+GGG - Chr7:61729095-61729114 MsG0780039305.01.T01:CDS 40.0%
ACAACATATCCCTTGCTTCA+TGG - Chr7:61729043-61729062 MsG0780039305.01.T01:intron 40.0%
ACGTTGTCTTCCAAGAAACA+TGG - Chr7:61728062-61728081 MsG0780039305.01.T01:three_prime_UTR 40.0%
ACTCTGATCCTTTCTTTCTC+CGG - Chr7:61730053-61730072 MsG0780039305.01.T01:intron 40.0%
AGATTCAATGACTGTTTGGG+AGG - Chr7:61728302-61728321 MsG0780039305.01.T01:CDS 40.0%
AGCACCTTAATGGAAGTTGA+AGG - Chr7:61730579-61730598 MsG0780039305.01.T01:CDS 40.0%
CAACATATCCCTTGCTTCAT+GGG - Chr7:61729044-61729063 MsG0780039305.01.T01:intron 40.0%
CAAGGGATATGTTGTTGATG+CGG + Chr7:61729038-61729057 None:intergenic 40.0%
CCCAAACAGTCATTGAATCT+TGG + Chr7:61728302-61728321 None:intergenic 40.0%
CGTTGTCTTCCAAGAAACAT+GGG - Chr7:61728063-61728082 MsG0780039305.01.T01:three_prime_UTR 40.0%
GAAACTGTTGCTGGAAAAGT+TGG - Chr7:61730449-61730468 MsG0780039305.01.T01:intron 40.0%
GAAGAATGGAAAGCTCTTGA+AGG - Chr7:61730485-61730504 MsG0780039305.01.T01:intron 40.0%
GAAGACAATGAAACTGTTGC+TGG - Chr7:61730440-61730459 MsG0780039305.01.T01:intron 40.0%
GAATCTTTAGCTGTGAAGGA+AGG - Chr7:61729560-61729579 MsG0780039305.01.T01:intron 40.0%
GATTGCTTCAGATAGTTTCG+AGG + Chr7:61728929-61728948 None:intergenic 40.0%
GCGTTTACCCTATAAATTGC+AGG - Chr7:61729322-61729341 MsG0780039305.01.T01:intron 40.0%
GCTGTCACGTATCAAAATGA+TGG - Chr7:61728204-61728223 MsG0780039305.01.T01:three_prime_UTR 40.0%
GGAGCAATGGTTAGATTAAG+AGG - Chr7:61728225-61728244 MsG0780039305.01.T01:exon 40.0%
TCCAGGATACTTATACATCC+AGG + Chr7:61730288-61730307 None:intergenic 40.0%
TGGTCACCCTGCAATTTATA+GGG + Chr7:61729332-61729351 None:intergenic 40.0%
TGTCTGTTAGCTCACAAAAC+CGG - Chr7:61730145-61730164 MsG0780039305.01.T01:intron 40.0%
TGTTGATGCGGTTACTATTG+TGG + Chr7:61729026-61729045 None:intergenic 40.0%
TTAGCTATGTCAAGAGCCTT+TGG - Chr7:61729649-61729668 MsG0780039305.01.T01:intron 40.0%
TTGACTATGAAGCACGGATA+CGG - Chr7:61729848-61729867 MsG0780039305.01.T01:CDS 40.0%
TTGCTGGAATCATACAGCTA+AGG + Chr7:61728688-61728707 None:intergenic 40.0%
TTGTGTATCCGGAGAAAGAA+AGG + Chr7:61730064-61730083 None:intergenic 40.0%
! CAATCGTCTATTTTCGATCC+AGG + Chr7:61730305-61730324 None:intergenic 40.0%
!! ATTGGGGTTGGTGTAAAAAG+TGG - Chr7:61730695-61730714 MsG0780039305.01.T01:CDS 40.0%
!! CTCATATTTCTAGCAAGCCT+TGG + Chr7:61730542-61730561 None:intergenic 40.0%
!! TTTGCTGCTGTTGACTTTCT+TGG + Chr7:61730239-61730258 None:intergenic 40.0%
!!! TGTTGTTTTGGCAACTGATG+GGG - Chr7:61729750-61729769 MsG0780039305.01.T01:CDS 40.0%
AACATCCTTCCCATGAAGCA+AGG + Chr7:61729056-61729075 None:intergenic 45.0%
AATCCAGGACAGTCATCATC+AGG + Chr7:61729631-61729650 None:intergenic 45.0%
ACACGACACATGTCTGACAT+GGG - Chr7:61729972-61729991 MsG0780039305.01.T01:CDS 45.0%
ACATCCTTCCCATGAAGCAA+GGG + Chr7:61729055-61729074 None:intergenic 45.0%
AGACAGGAACATGGAAGAAG+TGG + Chr7:61727937-61727956 None:intergenic 45.0%
AGTTGGAAGAGACAGGAACA+TGG + Chr7:61727946-61727965 None:intergenic 45.0%
ATATCCCTTGCTTCATGGGA+AGG - Chr7:61729048-61729067 MsG0780039305.01.T01:intron 45.0%
ATTTGTGAAGGAAGGAAGGG+TGG + Chr7:61728005-61728024 None:intergenic 45.0%
CTGGTCACCCTGCAATTTAT+AGG + Chr7:61729333-61729352 None:intergenic 45.0%
GAGTGGAACTGGATGAAGAA+TGG - Chr7:61730471-61730490 MsG0780039305.01.T01:intron 45.0%
GCCTGGATGTATAAGTATCC+TGG - Chr7:61730284-61730303 MsG0780039305.01.T01:intron 45.0%
GCTCTTGACATAGCTAATCC+AGG + Chr7:61729646-61729665 None:intergenic 45.0%
GTTGAAACCGAGGTGAATGA+TGG - Chr7:61728132-61728151 MsG0780039305.01.T01:three_prime_UTR 45.0%
TCGTGCAGTTCTTTGCACAA+GGG - Chr7:61729379-61729398 MsG0780039305.01.T01:intron 45.0%
TGATGCGGTTACTATTGTGG+TGG + Chr7:61729023-61729042 None:intergenic 45.0%
TGCAAAGAGTTGGAAGAGAC+AGG + Chr7:61727953-61727972 None:intergenic 45.0%
TGCGAAACTTTGTGTCCTAG+AGG + Chr7:61728886-61728905 None:intergenic 45.0%
TGGAAAAGTTGGAGTGGAAC+TGG - Chr7:61730460-61730479 MsG0780039305.01.T01:intron 45.0%
TGTCTTCCAAGAAACATGGG+TGG - Chr7:61728066-61728085 MsG0780039305.01.T01:three_prime_UTR 45.0%
TGTGAGCTAACAGACACTGA+AGG + Chr7:61730141-61730160 None:intergenic 45.0%
TGTTGCTGGAAAAGTTGGAG+TGG - Chr7:61730454-61730473 MsG0780039305.01.T01:intron 45.0%
TTTGTGAAGGAAGGAAGGGT+GGG + Chr7:61728004-61728023 None:intergenic 45.0%
! ACACATCTGGTGATGCAATG+AGG + Chr7:61729699-61729718 None:intergenic 45.0%
! TGTCTCTGTGATTGCTGTTG+AGG + Chr7:61729271-61729290 None:intergenic 45.0%
ATGAAGCACGGATACGGACA+CGG - Chr7:61729854-61729873 MsG0780039305.01.T01:CDS 50.0%
CAACAGCCACCCATGTTTCT+TGG + Chr7:61728075-61728094 None:intergenic 50.0%
CACATCCGGTTCTTCATCTG+CGG + Chr7:61729593-61729612 None:intergenic 50.0%
CACGACACATGTCTGACATG+GGG - Chr7:61729973-61729992 MsG0780039305.01.T01:CDS 50.0%
CAGGACTATGCTGGAGAAGA+AGG - Chr7:61728826-61728845 MsG0780039305.01.T01:intron 50.0%
CTATGCTGGAGAAGAAGGCA+TGG - Chr7:61728831-61728850 MsG0780039305.01.T01:intron 50.0%
CTCGTGCAGTTCTTTGCACA+AGG - Chr7:61729378-61729397 MsG0780039305.01.T01:intron 50.0%
GACACGACACATGTCTGACA+TGG - Chr7:61729971-61729990 MsG0780039305.01.T01:CDS 50.0%
GCACAGAGACTCCTGAGATA+AGG + Chr7:61730004-61730023 None:intergenic 50.0%
GGAAGGAAGGGTGGGAATTA+AGG + Chr7:61727996-61728015 None:intergenic 50.0%
GTCTTCTGTGGCGTGTTTGA+CGG - Chr7:61728853-61728872 MsG0780039305.01.T01:intron 50.0%
TAAAGCGCGCTGTTAAAGCC+TGG - Chr7:61730267-61730286 MsG0780039305.01.T01:intron 50.0%
TTTCGCCGCAGATGAAGAAC+CGG - Chr7:61729585-61729604 MsG0780039305.01.T01:intron 50.0%
TTTGACGGTCATGGTCCTCT+AGG - Chr7:61728868-61728887 MsG0780039305.01.T01:intron 50.0%
! ATGCCTGATGATGACTGTCC+TGG - Chr7:61729625-61729644 MsG0780039305.01.T01:intron 50.0%
! GAAGAAGGCATGGTCTTCTG+TGG - Chr7:61728841-61728860 MsG0780039305.01.T01:intron 50.0%
!! CAGGGTGACCAGTTGATAGT+TGG - Chr7:61729341-61729360 MsG0780039305.01.T01:intron 50.0%
AGCCACGATGTTGCTCCTAG+AGG - Chr7:61728096-61728115 MsG0780039305.01.T01:three_prime_UTR 55.0%
AGGAGGCAGAGTTGAAACCG+AGG - Chr7:61728122-61728141 MsG0780039305.01.T01:three_prime_UTR 55.0%
ATGGGGACACGCCTTATCTC+AGG - Chr7:61729990-61730009 MsG0780039305.01.T01:CDS 55.0%
CACGATGTTGCTCCTAGAGG+AGG - Chr7:61728099-61728118 MsG0780039305.01.T01:three_prime_UTR 55.0%
GATGTTGCTCCTAGAGGAGG+AGG - Chr7:61728102-61728121 MsG0780039305.01.T01:three_prime_UTR 55.0%
TGTGGCGTGTTTGACGGTCA+TGG - Chr7:61728859-61728878 MsG0780039305.01.T01:intron 55.0%
! CTCCTCTAGGAGCAACATCG+TGG + Chr7:61728101-61728120 None:intergenic 55.0%
ACGGATACGGACACGGACAC+CGG - Chr7:61729861-61729880 MsG0780039305.01.T01:CDS 60.0%
ACTCTGCCTCCTCCTCCTCT+AGG + Chr7:61728114-61728133 None:intergenic 60.0%
GTTGCTCCTAGAGGAGGAGG+AGG - Chr7:61728105-61728124 MsG0780039305.01.T01:three_prime_UTR 60.0%
CGGCGTGTCTGTGTCGTGTC+CGG + Chr7:61729883-61729902 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 61727932 61730909 61727932 ID=MsG0780039305.01;Name=MsG0780039305.01
Chr7 mRNA 61727932 61730909 61727932 ID=MsG0780039305.01.T01;Parent=MsG0780039305.01;Name=MsG0780039305.01.T01;_AED=0.28;_eAED=0.28;_QI=149|1|1|1|1|1|5|311|446
Chr7 exon 61730518 61730909 61730518 ID=MsG0780039305.01.T01:exon:17164;Parent=MsG0780039305.01.T01
Chr7 exon 61729668 61730012 61729668 ID=MsG0780039305.01.T01:exon:17165;Parent=MsG0780039305.01.T01
Chr7 exon 61729383 61729497 61729383 ID=MsG0780039305.01.T01:exon:17166;Parent=MsG0780039305.01.T01
Chr7 exon 61729070 61729293 61729070 ID=MsG0780039305.01.T01:exon:17167;Parent=MsG0780039305.01.T01
Chr7 exon 61727932 61728656 61727932 ID=MsG0780039305.01.T01:exon:17168;Parent=MsG0780039305.01.T01
Chr7 five_prime_UTR 61730761 61730909 61730761 ID=MsG0780039305.01.T01:five_prime_utr;Parent=MsG0780039305.01.T01
Chr7 CDS 61730518 61730760 61730518 ID=MsG0780039305.01.T01:cds;Parent=MsG0780039305.01.T01
Chr7 CDS 61729668 61730012 61729668 ID=MsG0780039305.01.T01:cds;Parent=MsG0780039305.01.T01
Chr7 CDS 61729383 61729497 61729383 ID=MsG0780039305.01.T01:cds;Parent=MsG0780039305.01.T01
Chr7 CDS 61729070 61729293 61729070 ID=MsG0780039305.01.T01:cds;Parent=MsG0780039305.01.T01
Chr7 CDS 61728243 61728656 61728243 ID=MsG0780039305.01.T01:cds;Parent=MsG0780039305.01.T01
Chr7 three_prime_UTR 61727932 61728242 61727932 ID=MsG0780039305.01.T01:three_prime_utr;Parent=MsG0780039305.01.T01
Gene Sequence

>MsG0780039305.01.T01

ATGGGTGGCTGTTGCAGCCACGATGTTGCTCCTAGAGGAGGAGGAGGCAGAGTTGAAACCGAGGTGAATGATGGAGAATATGAATATGATGATAGTGAAGATAATAATATTAATAATAATGATGCTGTCACGTATCAAAATGATGGAGCAATGGTTAGATTAAGAGGGTTTTCTAAGTTTGTTTCAATGTATACACAACAAGGTATGAAAGGTGTTAACCAAGATTCAATGACTGTTTGGGAGGACTATGCTGGAGAAGAAGGCATGGTCTTCTGTGGCGTGTTTGACGGTCATGGTCCTCTAGGACACAAAGTTTCGCAATTTATTCGCGACAATCTACCCTCGAAACTATCTGAAGCAATCAAAATGGCACAACAGAAGGCCAACAAATACTATGATGCTAATGACGCAGATACCGACAATTTTGACAATGTCCACCACAATAGTAACCGCATCAACAACATATCCCTTGCTTCATGGGAAGGATGTTTTCTGAAATCGTTTGATGAAATGGATGATCATCTTGCTCGGGAAGTTAACACTGATAGCTATTGCAGTGGTTGCACAGCTGTAGCTTTAATTAAACAGGGTGACCAGTTGATAGTTGGAAATTTGGGCGATTCTCGTGCAGTTCTTTGCACAAGGGATAGAGATCAACTAATTCCTGTTCAACTTACCGTTGATTTGAAACCGGATATTCCAAGTGAAGCTTCAAGAATCTTTAGCTGTGAAGGAAGGGTTTTCGCCGCAGATGAAGAACCGGATGTGTACAGAATATGGATGCCTGATGATGACTGTCCTGGATTAGCTATGTCAAGAGCCTTTGGAGACTTTTGTCTAAAAGATTATGGCCTCATTGCATCACCAGATGTGTTTTACAGAAAAATTACCAAGCAAGATGAATTTGTTGTTTTGGCAACTGATGGGATATGGGATGTTCTGACAAACAATGAAGTAATAAACATAGTTGCTTCAGCGCCAAGAAAGTCAACAGCAGCAAAGATGTTAGTAAAGCGCGCTGTTAAAGCCTGGATGTATAAGTATCCTGGATCGAAAATAGACGATTGTGCAGCCATATGCTTGTTTCTTGATGATCAACCTATTTTATCACATTCTCAATCGAGTTTCAAGCACTCTAAAAGTCGACATCGTCGCAGTAAGCACTCTAAATCACATCGAAACGAAGACAATGAAACTGTTGCTGGAAAAGTTGGAGTGGAACTGGATGAAGAATGGAAAGCTCTTGAAGGGTTAGCTAGAGCAAATTCAATATCAAAACTTCCAAGGCTTGCTAGAAATATGAGTAAAAGACAATCATCTAAGCACCTTAATGGAAGTTGA
Protein sequence

>MsG0780039305.01.T01

MGGCCSHDVAPRGGGGRVETEVNDGEYEYDDSEDNNINNNDAVTYQNDGAMVRLRGFSKFVSMYTQQGMKGVNQDSMTVWEDYAGEEGMVFCGVFDGHGPLGHKVSQFIRDNLPSKLSEAIKMAQQKANKYYDANDADTDNFDNVHHNSNRINNISLASWEGCFLKSFDEMDDHLAREVNTDSYCSGCTAVALIKQGDQLIVGNLGDSRAVLCTRDRDQLIPVQLTVDLKPDIPSEASRIFSCEGRVFAADEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLIASPDVFYRKITKQDEFVVLATDGIWDVLTNNEVINIVASAPRKSTAAKMLVKRAVKAWMYKYPGSKIDDCAAICLFLDDQPILSHSQSSFKHSKSRHRRSKHSKSHRNEDNETVAGKVGVELDEEWKALEGLARANSISKLPRLARNMSKRQSSKHLNGS*