AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040128.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040128.01.T01 MTR_7g084940 90.090 444 43 1 1 444 1 443 0.0 811
MsG0780040128.01.T01 MTR_7g084910 81.206 431 65 2 1 430 1 416 0.0 719
MsG0780040128.01.T01 MTR_7g056087 34.562 434 253 11 16 430 3 424 2.44e-73 237
MsG0780040128.01.T01 MTR_8g096530 31.368 424 270 8 15 430 5 415 8.35e-71 231
MsG0780040128.01.T01 MTR_3g098980 31.106 434 282 9 1 430 1 421 8.31e-68 223
MsG0780040128.01.T01 MTR_7g027175 30.435 414 271 8 23 430 22 424 7.14e-64 212
MsG0780040128.01.T01 MTR_4g007540 28.777 417 266 9 15 412 1 405 3.67e-57 194
MsG0780040128.01.T01 MTR_8g075610 28.934 394 246 10 24 398 1 379 3.01e-52 181
MsG0780040128.01.T01 MTR_2g105330 27.603 413 275 8 15 412 1 404 1.96e-50 177
MsG0780040128.01.T01 MTR_2g064495 27.315 432 284 10 15 430 1 418 2.70e-50 176
MsG0780040128.01.T01 MTR_3g026950 29.561 433 264 11 17 415 2 427 2.88e-47 169
MsG0780040128.01.T01 MTR_1g053315 28.054 442 283 16 14 430 15 446 3.23e-47 169
MsG0780040128.01.T01 MTR_1g081660 27.400 427 288 9 16 430 17 433 1.86e-46 166
MsG0780040128.01.T01 MTR_3g112180 28.924 446 281 14 12 441 7 432 9.58e-45 162
MsG0780040128.01.T01 MTR_1g040215 28.288 403 266 9 16 406 8 399 2.90e-43 158
MsG0780040128.01.T01 MTR_4g127650 26.829 451 280 11 16 433 9 442 3.22e-43 158
MsG0780040128.01.T01 MTR_3g049150 27.465 426 278 9 17 415 2 423 5.47e-41 152
MsG0780040128.01.T01 MTR_1g040175 28.389 391 257 10 17 395 9 388 6.93e-41 152
MsG0780040128.01.T01 MTR_3g071320 27.419 434 290 9 17 436 5 427 1.18e-39 148
MsG0780040128.01.T01 MTR_7g085930 28.200 461 264 14 17 431 6 445 2.79e-39 147
MsG0780040128.01.T01 MTR_4g097090 27.451 408 261 9 36 414 28 429 7.42e-38 143
MsG0780040128.01.T01 MTR_1g040195 25.879 398 253 11 11 398 1 366 7.92e-38 143
MsG0780040128.01.T01 MTR_5g076700 25.521 384 271 9 21 395 14 391 5.56e-37 141
MsG0780040128.01.T01 MTR_7g085990 27.133 457 274 13 17 431 2 441 1.42e-36 140
MsG0780040128.01.T01 MTR_7g114470 26.010 396 275 10 10 395 6 393 3.76e-36 139
MsG0780040128.01.T01 MTR_7g114520 25.441 397 276 11 10 395 6 393 8.40e-32 126
MsG0780040128.01.T01 MTR_4g013050 25.672 409 234 11 18 400 5 369 1.13e-31 125
MsG0780040128.01.T01 MTR_7g110610 26.598 391 226 13 15 399 3 338 3.77e-31 123
MsG0780040128.01.T01 MTR_7g114560 24.935 385 271 10 21 395 14 390 5.70e-31 124
MsG0780040128.01.T01 MTR_7g086000 26.327 452 284 16 15 429 2 441 1.08e-30 123
MsG0780040128.01.T01 MTR_1g040320 26.531 392 235 10 16 398 8 355 3.72e-30 121
MsG0780040128.01.T01 MTR_2g015430 25.750 400 268 14 17 399 2 389 4.41e-29 119
MsG0780040128.01.T01 MTR_4g055170 26.126 444 289 16 12 430 12 441 5.15e-29 119
MsG0780040128.01.T01 MTR_7g114550 24.935 385 271 10 21 395 14 390 5.48e-29 119
MsG0780040128.01.T01 MTR_7g114490 24.874 398 279 10 8 395 3 390 8.86e-29 118
MsG0780040128.01.T01 MTR_1g040315 25.469 373 250 13 16 378 8 362 2.62e-27 113
MsG0780040128.01.T01 MTR_8g079970 26.777 422 244 16 38 429 26 412 8.31e-25 106
MsG0780040128.01.T01 MTR_0190s0020 28.448 348 210 14 68 393 61 391 1.07e-23 103
MsG0780040128.01.T01 MTR_3g070170 22.768 448 303 14 17 429 12 451 1.27e-23 103
MsG0780040128.01.T01 MTR_5g090830 26.651 424 252 17 14 395 7 413 1.21e-22 100
MsG0780040128.01.T01 MTR_3g101900 27.297 370 240 11 68 420 64 421 1.59e-22 99.8
MsG0780040128.01.T01 MTR_3g101930 26.705 352 215 11 68 392 68 403 2.51e-22 99.4
MsG0780040128.01.T01 MTR_5g090810 26.415 424 253 18 14 395 7 413 8.12e-22 97.8
MsG0780040128.01.T01 MTR_3g450710 28.177 362 204 15 70 392 65 409 9.36e-22 97.8
MsG0780040128.01.T01 MTR_0502s0010 28.879 232 146 8 108 331 2 222 1.74e-21 93.2
MsG0780040128.01.T01 MTR_5g090880 28.412 359 210 15 70 393 67 413 1.82e-21 97.1
MsG0780040128.01.T01 MTR_4g094838 27.390 387 211 16 36 393 36 381 3.01e-21 95.9
MsG0780040128.01.T01 MTR_3g086020 25.926 378 235 12 52 416 43 388 3.18e-21 95.9
MsG0780040128.01.T01 MTR_5g026320 26.190 378 238 13 38 393 41 399 5.82e-21 95.5
MsG0780040128.01.T01 MTR_4g094842 25.000 404 253 15 59 433 53 435 9.39e-21 94.7
MsG0780040128.01.T01 MTR_0042s0190 28.326 233 146 7 173 395 3 224 2.59e-20 91.3
MsG0780040128.01.T01 MTR_3g026310 28.333 300 197 10 69 353 54 350 3.57e-20 92.8
MsG0780040128.01.T01 MTR_3g450690 27.887 355 211 14 70 392 72 413 4.57e-20 92.8
MsG0780040128.01.T01 MTR_4g022825 27.143 280 181 9 68 333 53 323 2.37e-19 90.5
MsG0780040128.01.T01 MTR_3g465990 25.806 403 255 16 7 383 4 388 2.81e-19 90.1
MsG0780040128.01.T01 MTR_3g465980 26.161 409 246 18 7 383 4 388 3.28e-19 90.1
MsG0780040128.01.T01 MTR_4g022720 27.698 278 177 9 68 333 53 318 6.13e-19 89.0
MsG0780040128.01.T01 MTR_3g101960 25.240 313 200 9 66 357 64 363 1.15e-18 88.6
MsG0780040128.01.T01 MTR_8g041770 28.521 284 179 9 57 331 53 321 1.55e-18 87.8
MsG0780040128.01.T01 MTR_3g088420 30.035 283 172 10 62 333 49 316 1.62e-18 87.8
MsG0780040128.01.T01 MTR_4g094835 25.330 379 239 13 36 393 40 395 2.19e-18 87.4
MsG0780040128.01.T01 MTR_3g102020 25.000 312 203 10 66 361 65 361 2.68e-18 87.4
MsG0780040128.01.T01 MTR_5g084850 23.558 416 257 12 37 429 28 405 4.60e-18 86.7
MsG0780040128.01.T01 MTR_3g465910 27.249 389 243 18 24 385 17 392 5.07e-18 86.7
MsG0780040128.01.T01 MTR_8g079950 26.190 420 249 14 38 429 26 412 7.72e-18 85.9
MsG0780040128.01.T01 MTR_8g079980 26.531 392 217 19 70 429 59 411 1.28e-17 85.1
MsG0780040128.01.T01 MTR_5g084870 24.228 421 249 14 37 429 28 406 1.74e-17 84.7
MsG0780040128.01.T01 MTR_3g101970 25.623 281 175 9 66 336 65 321 2.43e-17 84.3
MsG0780040128.01.T01 MTR_7g114960 21.972 355 262 5 14 363 5 349 3.33e-17 84.0
MsG0780040128.01.T01 MTR_7g026860 27.479 353 218 14 1 338 1 330 3.58e-17 83.6
MsG0780040128.01.T01 MTR_8g467580 23.398 359 219 14 66 395 56 387 4.21e-17 83.6
MsG0780040128.01.T01 MTR_4g022760 27.899 276 185 8 68 333 53 324 7.75e-17 82.4
MsG0780040128.01.T01 MTR_6g053810 24.638 345 210 12 70 384 71 395 1.27e-16 82.4
MsG0780040128.01.T01 MTR_3g102010 24.545 330 212 10 26 333 18 332 2.85e-16 81.3
MsG0780040128.01.T01 MTR_4g022800 24.934 381 259 12 68 430 53 424 3.25e-16 80.9
MsG0780040128.01.T01 MTR_5g081960 21.583 417 271 12 30 393 21 434 5.56e-16 80.5
MsG0780040128.01.T01 MTR_0042s0190 32.090 134 85 3 267 395 27 159 1.04e-15 76.6
MsG0780040128.01.T01 MTR_3g465930 25.815 399 257 16 15 385 8 395 1.21e-15 79.3
MsG0780040128.01.T01 MTR_6g045553 23.750 480 286 19 5 429 2 456 1.30e-15 79.3
MsG0780040128.01.T01 MTR_4g094828 25.455 385 256 14 68 430 57 432 1.97e-15 78.6
MsG0780040128.01.T01 MTR_3g049140 27.500 200 110 6 245 415 27 220 2.07e-15 76.3
MsG0780040128.01.T01 MTR_4g094832 24.194 310 207 9 99 393 83 379 2.86e-15 77.8
MsG0780040128.01.T01 MTR_7g014250 24.070 457 261 19 25 425 10 436 3.63e-15 77.8
MsG0780040128.01.T01 MTR_3g465950 26.263 396 249 16 15 385 8 385 4.48e-15 77.4
MsG0780040128.01.T01 MTR_4g022670 26.882 279 180 10 68 331 53 322 5.72e-15 77.0
MsG0780040128.01.T01 MTR_7g014330 24.834 451 265 21 25 425 10 436 1.67e-14 75.5
MsG0780040128.01.T01 MTR_8g467590 23.729 354 224 13 66 395 56 387 1.93e-14 75.5
MsG0780040128.01.T01 MTR_7g114510 24.000 250 177 6 153 395 8 251 2.26e-14 74.3
MsG0780040128.01.T01 MTR_3g465880 25.729 377 235 16 10 360 7 364 2.38e-14 75.1
MsG0780040128.01.T01 MTR_6g015815 25.735 272 172 9 148 394 147 413 9.06e-14 73.6
MsG0780040128.01.T01 MTR_2g007880 25.381 394 224 16 70 429 74 431 1.03e-13 73.2
MsG0780040128.01.T01 MTR_7g014620 24.793 363 224 13 84 418 68 409 3.56e-13 71.6
MsG0780040128.01.T01 MTR_7g013850 23.747 379 222 13 69 393 67 432 3.58e-13 71.6
MsG0780040128.01.T01 MTR_2g036780 23.297 279 202 7 8 283 3 272 8.15e-13 70.5
MsG0780040128.01.T01 MTR_3g100150 21.892 370 239 17 19 368 13 352 1.05e-12 70.1
MsG0780040128.01.T01 MTR_4g022290 24.808 391 245 15 68 430 58 427 1.36e-12 69.7
MsG0780040128.01.T01 MTR_6g015315 24.345 267 175 9 151 394 143 405 1.54e-12 69.7
MsG0780040128.01.T01 MTR_6g015850 22.969 357 227 12 70 394 70 410 2.83e-12 68.9
MsG0780040128.01.T01 MTR_3g465870 25.402 311 202 11 14 306 9 307 8.48e-12 67.0
MsG0780040128.01.T01 MTR_8g079710 25.385 390 245 15 68 430 57 427 1.75e-11 66.2
MsG0780040128.01.T01 MTR_2g045540 33.663 101 59 2 225 324 6 99 2.36e-11 61.2
MsG0780040128.01.T01 MTR_7g014610 23.913 460 295 14 17 429 8 459 5.33e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040128.01.T01 AT1G65450 55.211 451 186 6 1 441 1 445 1.11e-177 504
MsG0780040128.01.T01 AT1G65450 56.794 287 110 4 163 441 1 281 5.51e-110 326
MsG0780040128.01.T01 AT5G41040 31.840 424 270 9 15 430 15 427 2.64e-68 224
MsG0780040128.01.T01 AT5G41040 31.840 424 270 9 15 430 31 443 7.09e-68 223
MsG0780040128.01.T01 AT5G63560 31.221 426 266 10 14 430 6 413 2.46e-64 213
MsG0780040128.01.T01 AT3G48720 30.166 421 275 9 17 430 9 417 2.10e-61 206
MsG0780040128.01.T01 AT5G48930 30.144 418 267 9 15 415 1 410 4.01e-58 197
MsG0780040128.01.T01 AT1G27620 28.878 419 274 9 20 430 12 414 6.27e-50 176
MsG0780040128.01.T01 AT1G65450 50.649 154 74 2 1 152 1 154 1.16e-48 164
MsG0780040128.01.T01 AT2G19070 28.404 426 272 8 17 414 4 424 4.70e-48 171
MsG0780040128.01.T01 AT1G03390 28.929 439 286 17 9 431 15 443 6.32e-46 165
MsG0780040128.01.T01 AT5G57840 29.455 404 251 12 15 395 1 393 1.07e-44 162
MsG0780040128.01.T01 AT1G28680 28.141 398 262 11 17 399 4 392 5.06e-42 154
MsG0780040128.01.T01 AT2G40230 29.698 431 268 13 17 430 5 417 8.51e-42 154
MsG0780040128.01.T01 AT1G28680 29.670 364 226 11 19 366 6 355 4.39e-39 145
MsG0780040128.01.T01 AT5G07080 27.816 435 265 13 24 430 21 434 6.49e-37 140
MsG0780040128.01.T01 AT3G03480 26.000 400 257 14 16 395 18 398 1.17e-32 129
MsG0780040128.01.T01 AT4G31910 27.536 414 262 12 9 391 1 407 1.24e-32 129
MsG0780040128.01.T01 AT5G17540 26.718 393 264 14 16 395 8 389 1.17e-31 126
MsG0780040128.01.T01 AT3G47170 25.721 451 273 17 24 430 19 451 4.71e-31 124
MsG0780040128.01.T01 AT2G23510 26.974 456 273 18 8 430 8 436 7.16e-30 121
MsG0780040128.01.T01 AT3G62160 24.802 379 246 12 36 399 24 378 4.87e-27 112
MsG0780040128.01.T01 AT2G25150 24.947 473 277 18 1 430 1 438 3.90e-26 110
MsG0780040128.01.T01 AT1G24430 26.020 392 244 16 54 429 45 406 2.94e-24 104
MsG0780040128.01.T01 AT5G16410 24.819 415 262 16 32 418 55 447 3.60e-22 99.4
MsG0780040128.01.T01 AT3G50270 25.432 405 261 16 17 393 6 397 1.60e-21 97.1
MsG0780040128.01.T01 AT1G31490 27.062 388 235 16 30 393 20 383 2.24e-21 96.7
MsG0780040128.01.T01 AT3G26040 25.316 395 237 13 52 420 41 403 7.91e-21 94.7
MsG0780040128.01.T01 AT5G07860 27.915 283 181 9 64 336 66 335 1.20e-20 94.4
MsG0780040128.01.T01 AT1G32910 25.978 358 219 14 66 395 61 400 6.75e-20 92.4
MsG0780040128.01.T01 AT3G50280 25.000 400 266 10 17 393 4 392 6.88e-20 92.0
MsG0780040128.01.T01 AT1G78990 25.000 364 220 14 61 395 58 397 1.28e-19 91.3
MsG0780040128.01.T01 AT3G29670 24.138 406 282 13 8 393 2 401 1.33e-19 91.3
MsG0780040128.01.T01 AT5G61160 22.278 395 250 11 69 429 63 434 5.29e-19 89.4
MsG0780040128.01.T01 AT5G42830 26.706 337 212 13 46 360 34 357 1.00e-18 88.6
MsG0780040128.01.T01 AT5G07870 27.526 287 187 9 64 336 66 345 1.77e-18 87.8
MsG0780040128.01.T01 AT3G29635 25.526 380 242 15 45 393 37 406 1.92e-18 87.8
MsG0780040128.01.T01 AT5G39090 26.429 280 191 6 152 418 147 424 3.95e-17 83.6
MsG0780040128.01.T01 AT5G07850 28.720 289 181 13 58 336 59 332 2.57e-16 81.3
MsG0780040128.01.T01 AT5G38130 24.691 405 263 15 15 393 22 410 8.21e-16 79.7
MsG0780040128.01.T01 AT3G50280 26.255 259 170 6 147 393 13 262 1.25e-15 77.8
MsG0780040128.01.T01 AT3G50300 28.866 291 179 12 59 334 48 325 1.34e-15 79.0
MsG0780040128.01.T01 AT3G29680 25.818 275 152 8 152 393 144 399 1.66e-15 79.0
MsG0780040128.01.T01 AT3G29590 24.711 433 277 14 23 429 23 432 3.28e-15 77.8
MsG0780040128.01.T01 AT3G30280 25.054 467 253 20 12 430 1 418 4.16e-15 77.4
MsG0780040128.01.T01 AT1G24420 25.672 335 210 13 99 415 88 401 5.49e-15 77.0
MsG0780040128.01.T01 AT1G24420 25.672 335 210 13 99 415 88 401 5.49e-15 77.0
MsG0780040128.01.T01 AT5G39080 23.177 384 259 11 38 393 38 413 6.63e-15 77.0
MsG0780040128.01.T01 AT5G47950 24.824 427 267 16 12 418 1 393 1.36e-14 75.9
MsG0780040128.01.T01 AT5G39050 24.786 351 217 13 104 418 105 444 9.57e-14 73.6
MsG0780040128.01.T01 AT5G67160 23.919 347 233 11 64 393 50 382 1.01e-13 73.2
MsG0780040128.01.T01 AT3G50290 26.761 213 141 5 147 353 19 222 1.34e-13 71.2
MsG0780040128.01.T01 AT4G29250 23.958 384 259 16 11 377 8 375 2.51e-13 72.0
MsG0780040128.01.T01 AT5G23940 25.191 393 245 17 66 429 61 433 3.32e-13 71.6
MsG0780040128.01.T01 AT1G03940 22.364 313 198 12 147 429 151 448 4.24e-11 65.1

Find 124 sgRNAs with CRISPR-Local

Find 448 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTTCTCTCTCTATGGTTT+TGG 0.229566 7:-73394485 None:intergenic
CGGAAACCCCTCAACAAATA+AGG 0.231666 7:-73388710 None:intergenic
CTCAGAAGAACTTGACTTCA+TGG 0.240182 7:+73393674 MsG0780040128.01.T01:CDS
GGTTATCCTAATCAAGCTTT+TGG 0.261339 7:+73389329 MsG0780040128.01.T01:CDS
GAAGAAGAGGTATAGTTTCT+TGG 0.263738 7:-73388974 None:intergenic
GGCTTCTAGTGAATACAAAT+TGG 0.270068 7:+73389289 MsG0780040128.01.T01:CDS
GTGTCTTCATGGTGGAGGTT+AGG 0.273912 7:+73394086 MsG0780040128.01.T01:CDS
ATGTTGTCACCGCACATATA+TGG 0.286971 7:+73393778 MsG0780040128.01.T01:CDS
CTTAGACAACCTTGCTTCAT+TGG 0.295967 7:+73393503 MsG0780040128.01.T01:CDS
TAAAGCTTTCTTTAACTTCT+CGG 0.299134 7:-73389159 None:intergenic
GAATACAAATTGGATCAAAT+TGG 0.306770 7:+73389299 MsG0780040128.01.T01:CDS
ACCACCGGACAACAATATTT+AGG 0.314324 7:-73394140 None:intergenic
GCATTCCCAGTGTACGCTTT+TGG 0.319460 7:-73393894 None:intergenic
AAAATAGCAGATGATCTATT+AGG 0.337792 7:-73393831 None:intergenic
GACTGGGGAGAGTTGTATAA+TGG 0.346460 7:+73394041 MsG0780040128.01.T01:CDS
TAAGATGGGGTAAAATTGTT+AGG 0.349177 7:-73388811 None:intergenic
TGTCTTCATGGTGGAGGTTA+GGG 0.351875 7:+73394087 MsG0780040128.01.T01:CDS
CACTAAGTGGAAGAAATTAC+AGG 0.355014 7:-73388654 None:intergenic
AATTGTCCAAAAGCTTGATT+AGG 0.365401 7:-73389335 None:intergenic
TACCACCCTCTCTTGTAAAT+AGG 0.365467 7:-73388601 None:intergenic
GTAGCTTATGACTTCCTTGC+TGG 0.368529 7:+73389194 MsG0780040128.01.T01:CDS
TTGGGTCCTTTATATATAGT+TGG 0.373982 7:-73388889 None:intergenic
GCGGTATATCACCTATCTTA+TGG 0.376410 7:-73389379 None:intergenic
GAGGTTAGGGTTTGAGGAGG+TGG 0.379837 7:+73394100 MsG0780040128.01.T01:CDS
GGAAACCCCTCAACAAATAA+GGG 0.383635 7:-73388709 None:intergenic
ATCGCACCAACTATATATAA+AGG 0.384010 7:+73388883 MsG0780040128.01.T01:five_prime_UTR
TGGCTCTTCCTCTGATGAAA+TGG 0.384444 7:+73394243 MsG0780040128.01.T01:CDS
TTATCGACCTTGATCATCTC+AGG 0.387901 7:-73393612 None:intergenic
AACTTCTCGGTCACTATTTG+AGG 0.395634 7:-73389146 None:intergenic
ATTGGATCAAATTGGAAACT+TGG 0.396402 7:+73389307 MsG0780040128.01.T01:CDS
CTACCTTTAGGCATTAAATC+TGG 0.398605 7:+73393636 MsG0780040128.01.T01:CDS
ATGGTGGAGGTTAGGGTTTG+AGG 0.398760 7:+73394094 MsG0780040128.01.T01:CDS
TGCGAGACCACCACACTTGA+AGG 0.413890 7:-73393427 None:intergenic
AAGTGTGGTGGTCTCGCAAT+AGG 0.428795 7:+73393432 MsG0780040128.01.T01:CDS
GTTGTAATAATTATTTAAAG+AGG 0.430755 7:+73394380 MsG0780040128.01.T01:three_prime_UTR
GCAAAAGATTTCCATAAGAT+AGG 0.439156 7:+73389368 MsG0780040128.01.T01:CDS
GGAGGTGAAGGTGGTGGTGA+TGG 0.450977 7:+73394206 MsG0780040128.01.T01:CDS
CCTAAAAGTTGTCACACAAA+TGG 0.457076 7:-73394419 None:intergenic
GACACCAAAACATCCCCATT+TGG 0.457999 7:-73394068 None:intergenic
ACAAGCCATGCAATCTTTGA+CGG 0.466999 7:+73393462 MsG0780040128.01.T01:CDS
TATCAACAACCTTAAGGAAA+AGG 0.467945 7:+73393719 MsG0780040128.01.T01:CDS
TGAAGATATCAACAACCTTA+AGG 0.468242 7:+73393713 MsG0780040128.01.T01:CDS
GTTGTCCGGTGGTTTATCAT+AGG 0.469499 7:+73394150 MsG0780040128.01.T01:CDS
TTGGATCAAATTGGAAACTT+GGG 0.470071 7:+73389308 MsG0780040128.01.T01:CDS
ATGCAAGATCTATTATTGAC+TGG 0.471528 7:+73394024 MsG0780040128.01.T01:CDS
GAGAAAGTTAAAACATAATG+TGG 0.472890 7:+73394500 MsG0780040128.01.T01:three_prime_UTR
AAGGTCGATAATCTACCTTT+AGG 0.477322 7:+73393624 MsG0780040128.01.T01:CDS
AGATGAACTCTGAAACCAAC+AGG 0.481872 7:+73389225 MsG0780040128.01.T01:CDS
CAATATTTAAACAAGAGAAA+TGG 0.486039 7:-73394563 None:intergenic
TTCAAGGTTGGTGGATATGG+TGG 0.487650 7:+73393971 MsG0780040128.01.T01:CDS
GTTGGTGGATATGGTGGAGG+AGG 0.491422 7:+73393977 MsG0780040128.01.T01:CDS
ACCTTGATCATCTCAGGGTG+GGG 0.498526 7:-73393606 None:intergenic
GCAATCTATTTCCAACCTGT+TGG 0.504095 7:-73389240 None:intergenic
TTCCTTGTGAGGCTTCTCCT+AGG 0.506093 7:+73388563 MsG0780040128.01.T01:five_prime_UTR
AACCTTAAGGAAAAGGCAAA+AGG 0.507160 7:+73393726 MsG0780040128.01.T01:CDS
ACCTTCATGTCTTGAAGAAG+AGG 0.509343 7:-73388987 None:intergenic
AGTAGAGAACTTTCACTAAG+TGG 0.514234 7:-73388667 None:intergenic
TGCAAGATCTATTATTGACT+GGG 0.515629 7:+73394025 MsG0780040128.01.T01:CDS
AAGGTTGGTGGATATGGTGG+AGG 0.520706 7:+73393974 MsG0780040128.01.T01:CDS
CAGGAGTTGTCTGTCATGGA+AGG 0.524819 7:-73393553 None:intergenic
GATTGCAATGCAGAAGGTGT+TGG 0.525420 7:+73389257 MsG0780040128.01.T01:CDS
GTGGAGGGGATCGTGCAGCC+AGG 0.527015 7:-73393572 None:intergenic
AGGTATAGTTTCTTGGCTAG+TGG 0.532892 7:-73388967 None:intergenic
CTTCCATGACAGACAACTCC+TGG 0.533510 7:+73393554 MsG0780040128.01.T01:CDS
AAAATAAGAGACGAGAAAAG+AGG 0.534192 7:-73388757 None:intergenic
GCGATATTGAGAACAGTGAC+AGG 0.536837 7:-73388865 None:intergenic
CAGCCAGGAGTTGTCTGTCA+TGG 0.538049 7:-73393557 None:intergenic
CCATTGCCAAAAGCGTACAC+TGG 0.538546 7:+73393888 MsG0780040128.01.T01:CDS
ACCTCTTCTTCAAGACATGA+AGG 0.540481 7:+73388986 MsG0780040128.01.T01:CDS
GACCTTGATCATCTCAGGGT+GGG 0.543455 7:-73393607 None:intergenic
TTTAATGGAGGTGAAGGTGG+TGG 0.544069 7:+73394200 MsG0780040128.01.T01:CDS
GGGGAAGTTGACATGTGGAG+GGG 0.544898 7:-73393586 None:intergenic
GAAGCCTAAATATTGTTGTC+CGG 0.546027 7:+73394136 MsG0780040128.01.T01:CDS
ACACCAGATTTAATGCCTAA+AGG 0.547633 7:-73393639 None:intergenic
TTGGTGGATATGGTGGAGGA+GGG 0.550995 7:+73393978 MsG0780040128.01.T01:CDS
TTGAGGAGGTGGAATATCCA+TGG 0.552889 7:+73394111 MsG0780040128.01.T01:CDS
AGTTCTCTACTCTTGCCCCA+TGG 0.554968 7:+73388679 MsG0780040128.01.T01:five_prime_UTR
CATTGCCAAAAGCGTACACT+GGG 0.555800 7:+73393889 MsG0780040128.01.T01:CDS
CTCTCCTTGCATTTAGAGAG+AGG 0.558046 7:+73388630 MsG0780040128.01.T01:five_prime_UTR
CATGAAGTCAAGTTCTTCTG+AGG 0.565561 7:-73393673 None:intergenic
ATTCTCCTATTTACAAGAGA+GGG 0.566954 7:+73388596 MsG0780040128.01.T01:five_prime_UTR
TATACCGCTATGTGTTGTCC+AGG 0.567265 7:+73389394 MsG0780040128.01.T01:CDS
TCCGGTGGTTTATCATAGGA+AGG 0.567713 7:+73394154 MsG0780040128.01.T01:CDS
TTCTCGGTCACTATTTGAGG+AGG 0.569637 7:-73389143 None:intergenic
CCTTCACCTCCATTAAAAGA+AGG 0.574331 7:-73394194 None:intergenic
TATTCTCCTATTTACAAGAG+AGG 0.575271 7:+73388595 MsG0780040128.01.T01:five_prime_UTR
AGAAAGTTAAAACATAATGT+GGG 0.576162 7:+73394501 MsG0780040128.01.T01:three_prime_UTR
GAAATAGATTGCAATGCAGA+AGG 0.578803 7:+73389251 MsG0780040128.01.T01:CDS
TGAGGAGGTGGAATATCCAT+GGG 0.579236 7:+73394112 MsG0780040128.01.T01:CDS
CAAGTCTAGTCTTCATGACA+TGG 0.580398 7:+73394327 MsG0780040128.01.T01:three_prime_UTR
GTGGAGGTTAGGGTTTGAGG+AGG 0.584588 7:+73394097 MsG0780040128.01.T01:CDS
GACAAAGTGTGAGGAACTGA+AGG 0.587006 7:+73393938 MsG0780040128.01.T01:CDS
GTCTATGTTTGATAAGAACA+AGG 0.588679 7:-73389063 None:intergenic
CCTTGATCATCTCAGGGTGG+GGG 0.591241 7:-73393605 None:intergenic
GAACTCTGAAACCAACAGGT+TGG 0.598517 7:+73389229 MsG0780040128.01.T01:CDS
CTCCTATTTACAAGAGAGGG+TGG 0.599521 7:+73388599 MsG0780040128.01.T01:five_prime_UTR
TAAGTCCGTCAAAGATTGCA+TGG 0.607205 7:-73393467 None:intergenic
TGATGGAGTAAATATTATAG+TGG 0.608072 7:+73394223 MsG0780040128.01.T01:CDS
GCCTAAATATTGTTGTCCGG+TGG 0.612002 7:+73394139 MsG0780040128.01.T01:CDS
AGGACCTCTCTCTAAATGCA+AGG 0.612555 7:-73388634 None:intergenic
GGAGAATACTGATACTACCT+AGG 0.620692 7:-73388580 None:intergenic
CGACCTTGATCATCTCAGGG+TGG 0.621681 7:-73393608 None:intergenic
TCATGACATGGTTATATATG+CGG 0.625431 7:+73394339 MsG0780040128.01.T01:three_prime_UTR
AGGAGTTGTCTGTCATGGAA+GGG 0.626132 7:-73393552 None:intergenic
TCCTTCCTATGATAAACCAC+CGG 0.629116 7:-73394155 None:intergenic
TCTCGGTCACTATTTGAGGA+GGG 0.639489 7:-73389142 None:intergenic
TCATCTTTAATCTTCCAGCA+AGG 0.642443 7:-73389208 None:intergenic
TACCTAGGAGAAGCCTCACA+AGG 0.644525 7:-73388565 None:intergenic
GAAACCCCTCAACAAATAAG+GGG 0.647606 7:-73388708 None:intergenic
TGTCACAGTCAATTGCATGT+TGG 0.649994 7:-73393529 None:intergenic
CAGCTAACATCCTTCAAGTG+TGG 0.651061 7:+73393417 MsG0780040128.01.T01:intron
ATTAAAACTGTTGACACGAG+AGG 0.657509 7:-73393757 None:intergenic
GTTCTTATCAAACATAGACA+AGG 0.658774 7:+73389067 MsG0780040128.01.T01:CDS
CTAACATCCTTCAAGTGTGG+TGG 0.659409 7:+73393420 MsG0780040128.01.T01:CDS
CGATATTGAGAACAGTGACA+GGG 0.664702 7:-73388864 None:intergenic
TATCGACCTTGATCATCTCA+GGG 0.665358 7:-73393611 None:intergenic
GTACGCTTCGACAAAGTGTG+AGG 0.666222 7:+73393929 MsG0780040128.01.T01:CDS
AAGTGTGAGGAACTGAAGGA+AGG 0.666618 7:+73393942 MsG0780040128.01.T01:CDS
TGTTGGTAGCCAATGAAGCA+AGG 0.685871 7:-73393512 None:intergenic
GCAAGATCTATTATTGACTG+GGG 0.691684 7:+73394026 MsG0780040128.01.T01:CDS
TTTACATCTCCATATATGTG+CGG 0.702285 7:-73393787 None:intergenic
GAGGAGGTGGAATATCCATG+GGG 0.746219 7:+73394113 MsG0780040128.01.T01:CDS
TGTACCTGGACAACACATAG+CGG 0.761399 7:-73389398 None:intergenic
AGGAGGTGGAATATCCATGG+GGG 0.795748 7:+73394114 MsG0780040128.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATCAAAAATATTAAGAT+GGG - Chr7:73388828-73388847 None:intergenic 10.0%
!!! ATGTTTATATGTTTTTTTTA+AGG + Chr7:73389604-73389623 MsG0780040128.01.T01:intron 10.0%
!!! TTGAAAATTTTCTTATAAAT+AGG - Chr7:73391256-73391275 None:intergenic 10.0%
!!! TTTTAATAATATGCATAAAT+AGG + Chr7:73393152-73393171 MsG0780040128.01.T01:intron 10.0%
!! AAATTCTTGATAAAATTTCT+TGG + Chr7:73391767-73391786 MsG0780040128.01.T01:intron 15.0%
!! AAGTTTACAAAATATAATCT+TGG - Chr7:73392270-73392289 None:intergenic 15.0%
!! AGTTTACAAAATATAATCTT+GGG - Chr7:73392269-73392288 None:intergenic 15.0%
!! ATATCAAAAATATTAAGATG+GGG - Chr7:73388827-73388846 None:intergenic 15.0%
!! ATCAATTATGATTGAAATTA+GGG - Chr7:73393349-73393368 None:intergenic 15.0%
!! ATGAAACATTATTTCAATTA+GGG + Chr7:73392753-73392772 MsG0780040128.01.T01:intron 15.0%
!! ATGGATGATTAAAAAAAATT+TGG - Chr7:73389772-73389791 None:intergenic 15.0%
!! CAAAAATAAACATTAGTATA+CGG + Chr7:73392619-73392638 MsG0780040128.01.T01:intron 15.0%
!! GAATATCAAAAATATTAAGA+TGG - Chr7:73388829-73388848 None:intergenic 15.0%
!! GAATGATAAAATGATATTTA+TGG - Chr7:73392154-73392173 None:intergenic 15.0%
!! GTTGTAATAATTATTTAAAG+AGG + Chr7:73394380-73394399 MsG0780040128.01.T01:three_prime_UTR 15.0%
!! TAAAGAAAAGAAAAAAACTT+AGG + Chr7:73394613-73394632 MsG0780040128.01.T01:three_prime_UTR 15.0%
!! TAAATAAACAACTCAAATAA+TGG - Chr7:73393085-73393104 None:intergenic 15.0%
!! TATGAAACATTATTTCAATT+AGG + Chr7:73392752-73392771 MsG0780040128.01.T01:intron 15.0%
!! TTTCACTAAAAAATAAAACT+AGG + Chr7:73389878-73389897 MsG0780040128.01.T01:intron 15.0%
!!! AAATAATGGACTTTTTAAAT+AGG - Chr7:73393071-73393090 None:intergenic 15.0%
!!! AAATTTTCCAAATATTTTTC+AGG + Chr7:73390487-73390506 MsG0780040128.01.T01:intron 15.0%
!!! AATGTTTGTCTTTTTAATAT+TGG + Chr7:73391360-73391379 MsG0780040128.01.T01:intron 15.0%
!!! AATTTTCCAAATATTTTTCA+GGG + Chr7:73390488-73390507 MsG0780040128.01.T01:intron 15.0%
!!! ATACTTCACAAAATTTTATA+AGG + Chr7:73391395-73391414 MsG0780040128.01.T01:intron 15.0%
!!! GTATACTAATGTTTATTTTT+GGG - Chr7:73392620-73392639 None:intergenic 15.0%
!!! GTTTAAGTGATTTTTTTTTA+AGG + Chr7:73389631-73389650 MsG0780040128.01.T01:intron 15.0%
!!! TACTTCACAAAATTTTATAA+GGG + Chr7:73391396-73391415 MsG0780040128.01.T01:intron 15.0%
!!! TACTTTTCTTTGTAAATATA+TGG - Chr7:73394449-73394468 None:intergenic 15.0%
!!! TCTAAAATAAAATATGTCAA+AGG - Chr7:73389567-73389586 None:intergenic 15.0%
!! AAAAAAAATTTGGCGATTAA+TGG - Chr7:73389762-73389781 None:intergenic 20.0%
!! AAAAAGACAAACATTAAATG+AGG - Chr7:73391355-73391374 None:intergenic 20.0%
!! AAAAGACAAACATTAAATGA+GGG - Chr7:73391354-73391373 None:intergenic 20.0%
!! AAATCTATATATAGCAAACT+CGG - Chr7:73390211-73390230 None:intergenic 20.0%
!! AAGAGATAATCTAATTAAGA+GGG + Chr7:73391183-73391202 MsG0780040128.01.T01:intron 20.0%
!! ACAAACCTATTTAAGTAAAT+AGG - Chr7:73393224-73393243 None:intergenic 20.0%
!! AGAAAGTTAAAACATAATGT+GGG + Chr7:73394501-73394520 MsG0780040128.01.T01:three_prime_UTR 20.0%
!! ATATTGCTATATTTGATTCT+TGG + Chr7:73391687-73391706 MsG0780040128.01.T01:intron 20.0%
!! CAATATTTAAACAAGAGAAA+TGG - Chr7:73394566-73394585 None:intergenic 20.0%
!! CAATGACTTTAATAATAAGT+AGG - Chr7:73392940-73392959 None:intergenic 20.0%
!! CTATTTAGAAGTAGATAAAA+TGG - Chr7:73392969-73392988 None:intergenic 20.0%
!! GATCAATTATGATTGAAATT+AGG - Chr7:73393350-73393369 None:intergenic 20.0%
!! TATTGCTATATTTGATTCTT+GGG + Chr7:73391688-73391707 MsG0780040128.01.T01:intron 20.0%
!!! AAGTGATTTTTTTTTAAGGA+TGG + Chr7:73389635-73389654 MsG0780040128.01.T01:intron 20.0%
!!! AATTTTCTTATAAATAGGAC+CGG - Chr7:73391251-73391270 None:intergenic 20.0%
!!! ACATTATTTTTACTCAAACT+TGG + Chr7:73390399-73390418 MsG0780040128.01.T01:intron 20.0%
!!! ATAATTTTTCTGGGAATATA+AGG - Chr7:73392245-73392264 None:intergenic 20.0%
!!! ATTAGTTGAGTAGATTTTAA+TGG - Chr7:73390038-73390057 None:intergenic 20.0%
!!! CATTTTATCTACTTCTAAAT+AGG + Chr7:73392967-73392986 MsG0780040128.01.T01:intron 20.0%
!!! CGTATACTAATGTTTATTTT+TGG - Chr7:73392621-73392640 None:intergenic 20.0%
!!! TAACAGTCATTTTAACTTTA+AGG - Chr7:73390184-73390203 None:intergenic 20.0%
!!! TAGCAACATTTAATTTTAGT+TGG - Chr7:73390671-73390690 None:intergenic 20.0%
!!! TGCACTGTTTTTTTTTTTTA+CGG + Chr7:73391060-73391079 MsG0780040128.01.T01:intron 20.0%
!!! TGGTTTCTTTTCTTATAATA+AGG + Chr7:73391482-73391501 MsG0780040128.01.T01:intron 20.0%
!!! TGTGACTTTTTCTTATATAT+AGG - Chr7:73391293-73391312 None:intergenic 20.0%
!!! TTTAACTTTAAGGATTAAAC+TGG - Chr7:73390174-73390193 None:intergenic 20.0%
!!! TTTGTCTTTTTAATATTGGT+GGG + Chr7:73391364-73391383 MsG0780040128.01.T01:intron 20.0%
!!! TTTGTGTTTTTGTATTTGTT+GGG - Chr7:73388910-73388929 None:intergenic 20.0%
! AAAATAGCAGATGATCTATT+AGG - Chr7:73393834-73393853 None:intergenic 25.0%
! AAACCCAATCAATAGTATAA+GGG - Chr7:73392305-73392324 None:intergenic 25.0%
! AAATAAACATTAGTATACGG+CGG + Chr7:73392622-73392641 MsG0780040128.01.T01:intron 25.0%
! AACATTATTTCAATTAGGGT+TGG + Chr7:73392757-73392776 MsG0780040128.01.T01:intron 25.0%
! AATAATATGCATAAATAGGC+TGG + Chr7:73393156-73393175 MsG0780040128.01.T01:intron 25.0%
! ACATTATTTCAATTAGGGTT+GGG + Chr7:73392758-73392777 MsG0780040128.01.T01:intron 25.0%
! ACCTAAAAATAAGCTAATGA+CGG - Chr7:73389953-73389972 None:intergenic 25.0%
! ACTTCTTTAATTAATGCACT+CGG - Chr7:73391593-73391612 None:intergenic 25.0%
! ATAAAGCCTATTTCACTATA+AGG + Chr7:73393037-73393056 MsG0780040128.01.T01:intron 25.0%
! ATCTCAAAAACCTTTACTTA+AGG - Chr7:73389463-73389482 None:intergenic 25.0%
! ATTATGATTGAAATTAGGGT+TGG - Chr7:73393345-73393364 None:intergenic 25.0%
! CAAGAGATAATCTAATTAAG+AGG + Chr7:73391182-73391201 MsG0780040128.01.T01:intron 25.0%
! CAATGTGAGTTAAAATTGTA+TGG + Chr7:73391547-73391566 MsG0780040128.01.T01:intron 25.0%
! CAATTTATCATCCTTAGTAA+AGG + Chr7:73389434-73389453 MsG0780040128.01.T01:intron 25.0%
! CTCATTATTGTGAAAAACTA+TGG - Chr7:73389526-73389545 None:intergenic 25.0%
! GAATACAAATTGGATCAAAT+TGG + Chr7:73389299-73389318 MsG0780040128.01.T01:CDS 25.0%
! GAGAAAGTTAAAACATAATG+TGG + Chr7:73394500-73394519 MsG0780040128.01.T01:three_prime_UTR 25.0%
! GTAGAGAAAAGTTCTTAAAA+TGG - Chr7:73391821-73391840 None:intergenic 25.0%
! TAAGGAAACCAAAAAAAGTT+CGG + Chr7:73391741-73391760 MsG0780040128.01.T01:intron 25.0%
! TAATGTCAACTTCATTTGAT+TGG - Chr7:73390385-73390404 None:intergenic 25.0%
! TACTTCTAAATAGGCTAAAT+AGG + Chr7:73392976-73392995 MsG0780040128.01.T01:intron 25.0%
! TGATGGAGTAAATATTATAG+TGG + Chr7:73394223-73394242 MsG0780040128.01.T01:CDS 25.0%
! TTAAGACCTTATAGTGAAAT+AGG - Chr7:73393046-73393065 None:intergenic 25.0%
! TTATGATTGAAATTAGGGTT+GGG - Chr7:73393344-73393363 None:intergenic 25.0%
! TTGGATATTCTGCATATATA+CGG + Chr7:73392438-73392457 MsG0780040128.01.T01:intron 25.0%
!! AAAGCTGAGGAATTTTATAA+TGG - Chr7:73390756-73390775 None:intergenic 25.0%
!! AAATTTTTCCATTTCATCAG+AGG - Chr7:73394254-73394273 None:intergenic 25.0%
!! AATCATTTTCTTCGGAAAAA+CGG + Chr7:73390055-73390074 MsG0780040128.01.T01:intron 25.0%
!! AATCTTGGGAATAATTTTTC+TGG - Chr7:73392255-73392274 None:intergenic 25.0%
!! ACTCAACTAATCATTTTCTT+CGG + Chr7:73390047-73390066 MsG0780040128.01.T01:intron 25.0%
!! AGTTGAAAATGACACATTTT+AGG + Chr7:73391630-73391649 MsG0780040128.01.T01:intron 25.0%
!! ATCTTGGGAATAATTTTTCT+GGG - Chr7:73392254-73392273 None:intergenic 25.0%
!! CATAGTTTTTCACAATAATG+AGG + Chr7:73389524-73389543 MsG0780040128.01.T01:intron 25.0%
!! CGCTATCATTATTTTCAATA+GGG + Chr7:73388936-73388955 MsG0780040128.01.T01:five_prime_UTR 25.0%
!! CTATTAGTTCCTTCTTTTAA+TGG + Chr7:73394185-73394204 MsG0780040128.01.T01:CDS 25.0%
!! GAAAAATCATTGAAGTTTTG+TGG - Chr7:73389019-73389038 None:intergenic 25.0%
!! GCTATCATTATTTTCAATAG+GGG + Chr7:73388937-73388956 MsG0780040128.01.T01:five_prime_UTR 25.0%
!! GTGATAATATTTTCTTACTC+TGG + Chr7:73388786-73388805 MsG0780040128.01.T01:five_prime_UTR 25.0%
!! GTTAGTATTTAAAGTATTCC+TGG - Chr7:73392181-73392200 None:intergenic 25.0%
!! GTTTGTCTTTTTAATATTGG+TGG + Chr7:73391363-73391382 MsG0780040128.01.T01:intron 25.0%
!! TAAAGCTTTCTTTAACTTCT+CGG - Chr7:73389162-73389181 None:intergenic 25.0%
!! TCATTTTATCATTCATTTCC+AGG + Chr7:73392160-73392179 MsG0780040128.01.T01:intron 25.0%
!! TCGCTATCATTATTTTCAAT+AGG + Chr7:73388935-73388954 MsG0780040128.01.T01:five_prime_UTR 25.0%
!! TCTTTTCTTATAATAAGGAC+CGG + Chr7:73391487-73391506 MsG0780040128.01.T01:intron 25.0%
!! TGTATAATGGTTTTCCAAAT+GGG + Chr7:73394054-73394073 MsG0780040128.01.T01:CDS 25.0%
!! TTATACTATTGATTGGGTTT+GGG + Chr7:73392305-73392324 MsG0780040128.01.T01:intron 25.0%
!! TTGTATAATGGTTTTCCAAA+TGG + Chr7:73394053-73394072 MsG0780040128.01.T01:CDS 25.0%
!!! AATTTATCCCGAACTTTTTT+TGG - Chr7:73391752-73391771 None:intergenic 25.0%
!!! AGAATGTTGTTTTGTTCATA+AGG + Chr7:73392084-73392103 MsG0780040128.01.T01:intron 25.0%
!!! GTTTGTGTTTTTGTATTTGT+TGG - Chr7:73388911-73388930 None:intergenic 25.0%
!!! GTTTTGTTCATAAGGAAATT+AGG + Chr7:73392092-73392111 MsG0780040128.01.T01:intron 25.0%
!!! TGCTTCTTTTCTAATTTGTT+TGG + Chr7:73391887-73391906 MsG0780040128.01.T01:intron 25.0%
!!! TTCTTTTCGATTTGTTTTGA+TGG - Chr7:73389041-73389060 None:intergenic 25.0%
AAAACCAAGACAATCATTAG+TGG - Chr7:73391453-73391472 None:intergenic 30.0%
AAAATAAGAGACGAGAAAAG+AGG - Chr7:73388760-73388779 None:intergenic 30.0%
AAATAAGGGGAAAAAACCAT+GGG - Chr7:73388698-73388717 None:intergenic 30.0%
AACCCAATCAATAGTATAAG+GGG - Chr7:73392304-73392323 None:intergenic 30.0%
AACGTCAAAAAAACGGTTAA+TGG - Chr7:73389791-73389810 None:intergenic 30.0%
AAGGAAACCAAAAAAAGTTC+GGG + Chr7:73391742-73391761 MsG0780040128.01.T01:intron 30.0%
AAGGAAATTAGGAGGAATAA+AGG + Chr7:73392103-73392122 MsG0780040128.01.T01:intron 30.0%
AAGGGTTAACGTCAAAAAAA+CGG - Chr7:73389798-73389817 None:intergenic 30.0%
AATTGTCCAAAAGCTTGATT+AGG - Chr7:73389338-73389357 None:intergenic 30.0%
ACTTAAGGAAACCTTTACTA+AGG - Chr7:73389448-73389467 None:intergenic 30.0%
ATCGCACCAACTATATATAA+AGG + Chr7:73388883-73388902 MsG0780040128.01.T01:five_prime_UTR 30.0%
ATGCAAGATCTATTATTGAC+TGG + Chr7:73394024-73394043 MsG0780040128.01.T01:CDS 30.0%
ATTAAATGCAAAATAGTCCC+TGG + Chr7:73390131-73390150 MsG0780040128.01.T01:intron 30.0%
ATTCTCCTATTTACAAGAGA+GGG + Chr7:73388596-73388615 MsG0780040128.01.T01:five_prime_UTR 30.0%
ATTGGATCAAATTGGAAACT+TGG + Chr7:73389307-73389326 MsG0780040128.01.T01:CDS 30.0%
CAAACCCAATCAATAGTATA+AGG - Chr7:73392306-73392325 None:intergenic 30.0%
CCTAAAAATAAGCTAATGAC+GGG - Chr7:73389952-73389971 None:intergenic 30.0%
CCTATTTAAGTAAATAGGTG+AGG - Chr7:73393219-73393238 None:intergenic 30.0%
CCTCACCTATTTACTTAAAT+AGG + Chr7:73393216-73393235 MsG0780040128.01.T01:intron 30.0%
GACAAGAATATATTTGTACC+TGG - Chr7:73389415-73389434 None:intergenic 30.0%
GATTGTAAAAGAGTTGTTGA+TGG - Chr7:73390831-73390850 None:intergenic 30.0%
GCAAAAGATTTCCATAAGAT+AGG + Chr7:73389368-73389387 MsG0780040128.01.T01:CDS 30.0%
GTAAAGGTTTCCTTAAGTAA+AGG + Chr7:73389450-73389469 MsG0780040128.01.T01:intron 30.0%
GTCTATGTTTGATAAGAACA+AGG - Chr7:73389066-73389085 None:intergenic 30.0%
GTTCTTATCAAACATAGACA+AGG + Chr7:73389067-73389086 MsG0780040128.01.T01:CDS 30.0%
TAAGATGGGGTAAAATTGTT+AGG - Chr7:73388814-73388833 None:intergenic 30.0%
TAATAAGTAGGCCTGTAAAT+AGG - Chr7:73392928-73392947 None:intergenic 30.0%
TATCAACAACCTTAAGGAAA+AGG + Chr7:73393719-73393738 MsG0780040128.01.T01:CDS 30.0%
TATTCTCCTATTTACAAGAG+AGG + Chr7:73388595-73388614 MsG0780040128.01.T01:five_prime_UTR 30.0%
TCAACTTCATTTGATTGGAT+GGG - Chr7:73390380-73390399 None:intergenic 30.0%
TCATGACATGGTTATATATG+CGG + Chr7:73394339-73394358 MsG0780040128.01.T01:three_prime_UTR 30.0%
TGAAGATATCAACAACCTTA+AGG + Chr7:73393713-73393732 MsG0780040128.01.T01:CDS 30.0%
TTAAAGCCTATTTCATTGCA+AGG + Chr7:73393001-73393020 MsG0780040128.01.T01:intron 30.0%
TTAAGGATTAAACTGGCTAA+CGG - Chr7:73390167-73390186 None:intergenic 30.0%
TTATGTAAATGCAACTCGTT+TGG + Chr7:73392568-73392587 MsG0780040128.01.T01:intron 30.0%
TTATTAAAAAGGCTTGGCTT+AGG - Chr7:73393254-73393273 None:intergenic 30.0%
TTGCAATGAAATAGGCTTTA+AGG - Chr7:73393002-73393021 None:intergenic 30.0%
TTGGATCAAATTGGAAACTT+GGG + Chr7:73389308-73389327 MsG0780040128.01.T01:CDS 30.0%
TTGGGTCCTTTATATATAGT+TGG - Chr7:73388892-73388911 None:intergenic 30.0%
TTGTTCATAAGGAAATTAGG+AGG + Chr7:73392095-73392114 MsG0780040128.01.T01:intron 30.0%
TTTAATAAACAGGCCAATCT+AGG + Chr7:73393266-73393285 MsG0780040128.01.T01:intron 30.0%
TTTACATCTCCATATATGTG+CGG - Chr7:73393790-73393809 None:intergenic 30.0%
TTTCAAATGCATTAAAGCTG+AGG - Chr7:73390769-73390788 None:intergenic 30.0%
! AGAAATAGTTTTTCCTTGTG+AGG + Chr7:73388552-73388571 MsG0780040128.01.T01:five_prime_UTR 30.0%
! CATTATTTTCAATAGGGGAT+GGG + Chr7:73388942-73388961 MsG0780040128.01.T01:exon 30.0%
! CGTTTGTTTCAAGTCATATT+TGG + Chr7:73391972-73391991 MsG0780040128.01.T01:intron 30.0%
! CTTATACTATTGATTGGGTT+TGG + Chr7:73392304-73392323 MsG0780040128.01.T01:intron 30.0%
! GCATCACTCTTTTATAATCT+CGG - Chr7:73390560-73390579 None:intergenic 30.0%
! GTATAATGGTTTTCCAAATG+GGG + Chr7:73394055-73394074 MsG0780040128.01.T01:CDS 30.0%
! TCATTATTTTCAATAGGGGA+TGG + Chr7:73388941-73388960 MsG0780040128.01.T01:exon 30.0%
! TGAATTTTCTTCGTTGGATT+AGG + Chr7:73390619-73390638 MsG0780040128.01.T01:intron 30.0%
! TGCAAGATCTATTATTGACT+GGG + Chr7:73394025-73394044 MsG0780040128.01.T01:CDS 30.0%
! TGTTATGTTTCGACAGTTTT+AGG + Chr7:73392414-73392433 MsG0780040128.01.T01:intron 30.0%
! TGTTTTCTTTGTCTAGGTTT+TGG + Chr7:73392381-73392400 MsG0780040128.01.T01:intron 30.0%
! TTAGTTCCTTCTTTTAATGG+AGG + Chr7:73394188-73394207 MsG0780040128.01.T01:CDS 30.0%
! TTGAAATGTGTTATTATCGC+TGG + Chr7:73390793-73390812 MsG0780040128.01.T01:intron 30.0%
! TTTTTCCACTTCTCTTAACA+AGG - Chr7:73391018-73391037 None:intergenic 30.0%
!! AAAAGGAGTATTGATAATCC+CGG + Chr7:73389827-73389846 MsG0780040128.01.T01:intron 30.0%
!! ATCGATTTTATATACTCCTC+CGG - Chr7:73391509-73391528 None:intergenic 30.0%
!! GAACACACAATATTTTTACG+CGG - Chr7:73388733-73388752 None:intergenic 30.0%
!! GATTGGCCTGTTTATTAAAA+AGG - Chr7:73393265-73393284 None:intergenic 30.0%
!! TTTTCTGGGAATATAAGGAT+GGG - Chr7:73392240-73392259 None:intergenic 30.0%
!! TTTTTCCCCTTATTTGTTGA+GGG + Chr7:73388703-73388722 MsG0780040128.01.T01:five_prime_UTR 30.0%
!! TTTTTCTGGGAATATAAGGA+TGG - Chr7:73392241-73392260 None:intergenic 30.0%
!!! AGGCTTGCAAATTTTTTCAT+AGG - Chr7:73392826-73392845 None:intergenic 30.0%
!!! ATCATCTGCTATTTTGTATG+CGG + Chr7:73393839-73393858 MsG0780040128.01.T01:CDS 30.0%
!!! GTCTTGGTTTTGATGATTTT+TGG + Chr7:73391462-73391481 MsG0780040128.01.T01:intron 30.0%
!!! GTTTTAACTTTCTCTCTCTA+TGG - Chr7:73394494-73394513 None:intergenic 30.0%
!!! TTTTTTCCCCTTATTTGTTG+AGG + Chr7:73388702-73388721 MsG0780040128.01.T01:five_prime_UTR 30.0%
!!! TTTTTTTGACGTTAACCCTT+TGG + Chr7:73389798-73389817 MsG0780040128.01.T01:intron 30.0%
!!! TTTTTTTTACGGTATGCACA+TGG + Chr7:73391071-73391090 MsG0780040128.01.T01:intron 30.0%
AACCTTAAGGAAAAGGCAAA+AGG + Chr7:73393726-73393745 MsG0780040128.01.T01:CDS 35.0%
AAGGTCGATAATCTACCTTT+AGG + Chr7:73393624-73393643 MsG0780040128.01.T01:CDS 35.0%
AAGTCATATTTGGAGATTCC+TGG + Chr7:73391982-73392001 MsG0780040128.01.T01:intron 35.0%
AATAAGGGGAAAAAACCATG+GGG - Chr7:73388697-73388716 None:intergenic 35.0%
ACAACCACTAATGATTGTCT+TGG + Chr7:73391446-73391465 MsG0780040128.01.T01:intron 35.0%
ACACCAGATTTAATGCCTAA+AGG - Chr7:73393642-73393661 None:intergenic 35.0%
ACACTATAAGTGTGGATAAG+TGG - Chr7:73392671-73392690 None:intergenic 35.0%
AGAGGGATGAATTAGGATTT+AGG - Chr7:73390316-73390335 None:intergenic 35.0%
AGCATTTGTTCTTGCAAGAA+CGG - Chr7:73390961-73390980 None:intergenic 35.0%
AGTAGAGAACTTTCACTAAG+TGG - Chr7:73388670-73388689 None:intergenic 35.0%
AGTCATATTTGGAGATTCCT+GGG + Chr7:73391983-73392002 MsG0780040128.01.T01:intron 35.0%
ATTAAAACTGTTGACACGAG+AGG - Chr7:73393760-73393779 None:intergenic 35.0%
ATTCCTGGGAATATGATAGT+AGG + Chr7:73391997-73392016 MsG0780040128.01.T01:intron 35.0%
CAAAAAAATAGGCCTCTGAA+AGG - Chr7:73392864-73392883 None:intergenic 35.0%
CAAATAAGGGGAAAAAACCA+TGG - Chr7:73388699-73388718 None:intergenic 35.0%
CACTAAGTGGAAGAAATTAC+AGG - Chr7:73388657-73388676 None:intergenic 35.0%
CACTATAAGTGTGGATAAGT+GGG - Chr7:73392670-73392689 None:intergenic 35.0%
CATAAATAGGCTGGCATATT+AGG + Chr7:73393165-73393184 MsG0780040128.01.T01:intron 35.0%
CCTAAAAGTTGTCACACAAA+TGG - Chr7:73394422-73394441 None:intergenic 35.0%
CTACCTTTAGGCATTAAATC+TGG + Chr7:73393636-73393655 MsG0780040128.01.T01:CDS 35.0%
GAAATAGATTGCAATGCAGA+AGG + Chr7:73389251-73389270 MsG0780040128.01.T01:CDS 35.0%
GAAGCCTAAATATTGTTGTC+CGG + Chr7:73394136-73394155 MsG0780040128.01.T01:CDS 35.0%
GAGGGATGAATTAGGATTTA+GGG - Chr7:73390315-73390334 None:intergenic 35.0%
GATTCTTGGGTTATGTTAAC+CGG + Chr7:73391701-73391720 MsG0780040128.01.T01:intron 35.0%
GCCTGTTTATTAAAAAGGCT+TGG - Chr7:73393260-73393279 None:intergenic 35.0%
GCTCATCCCTGAAAAATATT+TGG - Chr7:73390497-73390516 None:intergenic 35.0%
GGCTTCTAGTGAATACAAAT+TGG + Chr7:73389289-73389308 MsG0780040128.01.T01:CDS 35.0%
GGTTACAAATTCGTTTGAGA+GGG - Chr7:73390333-73390352 None:intergenic 35.0%
GGTTTCCTTAAACATTGCTT+CGG - Chr7:73391731-73391750 None:intergenic 35.0%
GTCAAACTTTACTTTCTTCC+CGG - Chr7:73389849-73389868 None:intergenic 35.0%
GTCAACTTCATTTGATTGGA+TGG - Chr7:73390381-73390400 None:intergenic 35.0%
GTGGATAAGTGGGAAATTTA+AGG - Chr7:73392660-73392679 None:intergenic 35.0%
GTTTCCTTAAACATTGCTTC+GGG - Chr7:73391730-73391749 None:intergenic 35.0%
TAAAAGAGTGATGCTATTGC+TGG + Chr7:73390566-73390585 MsG0780040128.01.T01:intron 35.0%
TAAGTAAATAGGTGAGGCTT+AGG - Chr7:73393213-73393232 None:intergenic 35.0%
TACTATTCAGCATTTCCCTT+CGG + Chr7:73391946-73391965 MsG0780040128.01.T01:intron 35.0%
TCAAACTTTACTTTCTTCCC+GGG - Chr7:73389848-73389867 None:intergenic 35.0%
TCATCTTTAATCTTCCAGCA+AGG - Chr7:73389211-73389230 None:intergenic 35.0%
TCTCTTTGTGATGTAGATGT+GGG - Chr7:73390927-73390946 None:intergenic 35.0%
TGGTTACAAATTCGTTTGAG+AGG - Chr7:73390334-73390353 None:intergenic 35.0%
TGTTGGATTGCATACATCTT+TGG - Chr7:73390898-73390917 None:intergenic 35.0%
TTCTTATAAATAGGACCGGA+GGG - Chr7:73391247-73391266 None:intergenic 35.0%
TTGAAATTAGGGTTGGGAAT+TGG - Chr7:73393338-73393357 None:intergenic 35.0%
TTGCATTTAATCCTGAGTCA+TGG - Chr7:73390122-73390141 None:intergenic 35.0%
TTTCAATTAGGGTTGGGAAT+AGG + Chr7:73392764-73392783 MsG0780040128.01.T01:intron 35.0%
TTTCCTACTATCATATTCCC+AGG - Chr7:73392003-73392022 None:intergenic 35.0%
TTTCCTTAAACATTGCTTCG+GGG - Chr7:73391729-73391748 None:intergenic 35.0%
TTTCTTATAAATAGGACCGG+AGG - Chr7:73391248-73391267 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG + Chr7:73391490-73391509 MsG0780040128.01.T01:intron 35.0%
! AAGAAAGTGTGAATGGATCT+AGG + Chr7:73390238-73390257 MsG0780040128.01.T01:intron 35.0%
! AAGGATGGGAATTTTATTCG+CGG - Chr7:73392226-73392245 None:intergenic 35.0%
! ACTTTCTCTCTCTATGGTTT+TGG - Chr7:73394488-73394507 None:intergenic 35.0%
! AGCGAATGAATTTTCTTCGT+TGG + Chr7:73390613-73390632 MsG0780040128.01.T01:intron 35.0%
! CCATTTGTGTGACAACTTTT+AGG + Chr7:73394419-73394438 MsG0780040128.01.T01:three_prime_UTR 35.0%
! GAAGAAGAGGTATAGTTTCT+TGG - Chr7:73388977-73388996 None:intergenic 35.0%
! GACCCCTTATACTATTGATT+GGG + Chr7:73392299-73392318 MsG0780040128.01.T01:intron 35.0%
! GCAAGATCTATTATTGACTG+GGG + Chr7:73394026-73394045 MsG0780040128.01.T01:CDS 35.0%
! GCCAAGCCTTTTTAATAAAC+AGG + Chr7:73393256-73393275 MsG0780040128.01.T01:intron 35.0%
! GGTTATCCTAATCAAGCTTT+TGG + Chr7:73389329-73389348 MsG0780040128.01.T01:CDS 35.0%
! GTTTGACAAGAAAGTGTGAA+TGG + Chr7:73390231-73390250 MsG0780040128.01.T01:intron 35.0%
! TACCTTTTGCCTTTTCCTTA+AGG - Chr7:73393731-73393750 None:intergenic 35.0%
! TCTCGATTTTCACGTGAAAA+CGG + Chr7:73389091-73389110 MsG0780040128.01.T01:CDS 35.0%
! TGAAGGAAGGTGAATTTTCA+AGG + Chr7:73393955-73393974 MsG0780040128.01.T01:CDS 35.0%
! TGTCTTTTTAATACTCCCTC+CGG + Chr7:73391229-73391248 MsG0780040128.01.T01:intron 35.0%
! TTTTCCAAATGGGGATGTTT+TGG + Chr7:73394064-73394083 MsG0780040128.01.T01:CDS 35.0%
!! AAAGGAGTATTGATAATCCC+GGG + Chr7:73389828-73389847 MsG0780040128.01.T01:intron 35.0%
!! ACTCCTTTTTGAGAACCAAA+GGG - Chr7:73389816-73389835 None:intergenic 35.0%
!! AGACAGTTTTGTCATCAATG+TGG - Chr7:73391214-73391233 None:intergenic 35.0%
!! CCCGTCATTAGCTTATTTTT+AGG + Chr7:73389949-73389968 MsG0780040128.01.T01:intron 35.0%
!! TAACCCTTTGGTTCTCAAAA+AGG + Chr7:73389810-73389829 MsG0780040128.01.T01:intron 35.0%
!! TACTCCTTTTTGAGAACCAA+AGG - Chr7:73389817-73389836 None:intergenic 35.0%
!! TTTTCCCCTTATTTGTTGAG+GGG + Chr7:73388704-73388723 MsG0780040128.01.T01:five_prime_UTR 35.0%
!! TTTTCTTCGTTGGATTAGGA+TGG + Chr7:73390623-73390642 MsG0780040128.01.T01:intron 35.0%
!!! ATTTTCAAGGTTGGTGGATA+TGG + Chr7:73393968-73393987 MsG0780040128.01.T01:CDS 35.0%
!!! CTTTCAGAGGCCTATTTTTT+TGG + Chr7:73392862-73392881 MsG0780040128.01.T01:intron 35.0%
!!! TGCAAATTTTTTCATAGGCC+AGG - Chr7:73392821-73392840 None:intergenic 35.0%
!!! TGTTTCGACAGTTTTAGGTT+TGG + Chr7:73392419-73392438 MsG0780040128.01.T01:intron 35.0%
AACTTCTCGGTCACTATTTG+AGG - Chr7:73389149-73389168 None:intergenic 40.0%
ACAAGCCATGCAATCTTTGA+CGG + Chr7:73393462-73393481 MsG0780040128.01.T01:CDS 40.0%
ACCACCGGACAACAATATTT+AGG - Chr7:73394143-73394162 None:intergenic 40.0%
ACCTCTTCTTCAAGACATGA+AGG + Chr7:73388986-73389005 MsG0780040128.01.T01:CDS 40.0%
ACCTTCATGTCTTGAAGAAG+AGG - Chr7:73388990-73389009 None:intergenic 40.0%
ACTATTCAGCATTTCCCTTC+GGG + Chr7:73391947-73391966 MsG0780040128.01.T01:intron 40.0%
AGGATGGTTAGTGGAATACA+AGG + Chr7:73390639-73390658 MsG0780040128.01.T01:intron 40.0%
AGGTATAGTTTCTTGGCTAG+TGG - Chr7:73388970-73388989 None:intergenic 40.0%
AGTGTGCGAGTATAACAACA+AGG + Chr7:73392686-73392705 MsG0780040128.01.T01:intron 40.0%
ATACTCGCACACTATAAGTG+TGG - Chr7:73392679-73392698 None:intergenic 40.0%
ATGTTGTCACCGCACATATA+TGG + Chr7:73393778-73393797 MsG0780040128.01.T01:CDS 40.0%
ATTTGATTGGATGGGAAGAG+TGG - Chr7:73390372-73390391 None:intergenic 40.0%
CACATCTACATCACAAAGAG+AGG + Chr7:73390926-73390945 MsG0780040128.01.T01:intron 40.0%
CATGAAGTCAAGTTCTTCTG+AGG - Chr7:73393676-73393695 None:intergenic 40.0%
CCACTTCTCTTAACAAGGTT+GGG - Chr7:73391013-73391032 None:intergenic 40.0%
CCTTCACCTCCATTAAAAGA+AGG - Chr7:73394197-73394216 None:intergenic 40.0%
CGACCCCTTATACTATTGAT+TGG + Chr7:73392298-73392317 MsG0780040128.01.T01:intron 40.0%
CGATATTGAGAACAGTGACA+GGG - Chr7:73388867-73388886 None:intergenic 40.0%
CTCAGAAGAACTTGACTTCA+TGG + Chr7:73393674-73393693 MsG0780040128.01.T01:CDS 40.0%
CTCTCTTTGTGATGTAGATG+TGG - Chr7:73390928-73390947 None:intergenic 40.0%
CTCTTTGTGATGTAGATGTG+GGG - Chr7:73390926-73390945 None:intergenic 40.0%
CTTAGACAACCTTGCTTCAT+TGG + Chr7:73393503-73393522 MsG0780040128.01.T01:CDS 40.0%
GAAACCCCTCAACAAATAAG+GGG - Chr7:73388711-73388730 None:intergenic 40.0%
GACAAGCCTTGCAATGAAAT+AGG - Chr7:73393010-73393029 None:intergenic 40.0%
GCAATCTATTTCCAACCTGT+TGG - Chr7:73389243-73389262 None:intergenic 40.0%
GCGGTATATCACCTATCTTA+TGG - Chr7:73389382-73389401 None:intergenic 40.0%
GGAAACCCCTCAACAAATAA+GGG - Chr7:73388712-73388731 None:intergenic 40.0%
GGAGAATACTGATACTACCT+AGG - Chr7:73388583-73388602 None:intergenic 40.0%
GGATGGTTAGTGGAATACAA+GGG + Chr7:73390640-73390659 MsG0780040128.01.T01:intron 40.0%
TAAGTCCGTCAAAGATTGCA+TGG - Chr7:73393470-73393489 None:intergenic 40.0%
TACCACCCTCTCTTGTAAAT+AGG - Chr7:73388604-73388623 None:intergenic 40.0%
TAGACAAAGAAAACACGTGC+AGG - Chr7:73392376-73392395 None:intergenic 40.0%
TATCGACCTTGATCATCTCA+GGG - Chr7:73393614-73393633 None:intergenic 40.0%
TCCACTTCTCTTAACAAGGT+TGG - Chr7:73391014-73391033 None:intergenic 40.0%
TCCTTCCTATGATAAACCAC+CGG - Chr7:73394158-73394177 None:intergenic 40.0%
TCGTTTGAGAGGGATGAATT+AGG - Chr7:73390323-73390342 None:intergenic 40.0%
TGTCACAGTCAATTGCATGT+TGG - Chr7:73393532-73393551 None:intergenic 40.0%
TTATCGACCTTGATCATCTC+AGG - Chr7:73393615-73393634 None:intergenic 40.0%
TTGTTCTTGCAAGAACGGAA+TGG - Chr7:73390956-73390975 None:intergenic 40.0%
TTTGATTGGATGGGAAGAGT+GGG - Chr7:73390371-73390390 None:intergenic 40.0%
! ATTTGGCGATTAATGGATGC+AGG - Chr7:73389755-73389774 None:intergenic 40.0%
! CAAGTCTAGTCTTCATGACA+TGG + Chr7:73394327-73394346 MsG0780040128.01.T01:three_prime_UTR 40.0%
! CCTTCTTTTAATGGAGGTGA+AGG + Chr7:73394194-73394213 MsG0780040128.01.T01:CDS 40.0%
! TCTTTTAATGGAGGTGAAGG+TGG + Chr7:73394197-73394216 MsG0780040128.01.T01:CDS 40.0%
! TGCACGTGTTTTCTTTGTCT+AGG + Chr7:73392375-73392394 MsG0780040128.01.T01:intron 40.0%
! TTTGGCGATTAATGGATGCA+GGG - Chr7:73389754-73389773 None:intergenic 40.0%
! TTTTCCAGCTACTTGCGATT+TGG + Chr7:73392347-73392366 MsG0780040128.01.T01:intron 40.0%
!! AGATGAACTCTGAAACCAAC+AGG + Chr7:73389225-73389244 MsG0780040128.01.T01:CDS 40.0%
!! AGGTGAATTTTCAAGGTTGG+TGG + Chr7:73393962-73393981 MsG0780040128.01.T01:CDS 40.0%
!! GGAAGGTGAATTTTCAAGGT+TGG + Chr7:73393959-73393978 MsG0780040128.01.T01:CDS 40.0%
!!! AGAAGGTGTTGGTTTTGTTG+TGG + Chr7:73389268-73389287 MsG0780040128.01.T01:CDS 40.0%
!!! ATGTTTTGGTGTCTTCATGG+TGG + Chr7:73394078-73394097 MsG0780040128.01.T01:CDS 40.0%
AAAATTTGCAAGCCTGAGCC+TGG + Chr7:73392831-73392850 MsG0780040128.01.T01:intron 45.0%
AAGTGTGAGGAACTGAAGGA+AGG + Chr7:73393942-73393961 MsG0780040128.01.T01:CDS 45.0%
AATCTAGGCCAAGCCTAAAC+AGG + Chr7:73393281-73393300 MsG0780040128.01.T01:intron 45.0%
AATTAATGCACTCGGAGCAC+TGG - Chr7:73391585-73391604 None:intergenic 45.0%
ACCTGGCCTATTTAAAAGCC+TGG + Chr7:73392889-73392908 MsG0780040128.01.T01:intron 45.0%
AGGACCTCTCTCTAAATGCA+AGG - Chr7:73388637-73388656 None:intergenic 45.0%
AGGAGTTGTCTGTCATGGAA+GGG - Chr7:73393555-73393574 None:intergenic 45.0%
AGGATTAAACTGGCTAACGG+AGG - Chr7:73390164-73390183 None:intergenic 45.0%
AGGCCTGTAAATAGGCTTTC+AGG - Chr7:73392920-73392939 None:intergenic 45.0%
AGTGGGAAGAAGAAGGAGAA+TGG - Chr7:73390354-73390373 None:intergenic 45.0%
CAATATTTAGGCTTCCCCCA+TGG - Chr7:73394131-73394150 None:intergenic 45.0%
CAGCTAACATCCTTCAAGTG+TGG + Chr7:73393417-73393436 MsG0780040128.01.T01:intron 45.0%
CATGGATCATTGTGACAGTG+AGG - Chr7:73390104-73390123 None:intergenic 45.0%
CCAGGTCAGGCCAAAAAAAT+AGG - Chr7:73392875-73392894 None:intergenic 45.0%
CCCAACCTTGTTAAGAGAAG+TGG + Chr7:73391010-73391029 MsG0780040128.01.T01:intron 45.0%
CGGAAACCCCTCAACAAATA+AGG - Chr7:73388713-73388732 None:intergenic 45.0%
CTAACATCCTTCAAGTGTGG+TGG + Chr7:73393420-73393439 MsG0780040128.01.T01:CDS 45.0%
CTCCTATTTACAAGAGAGGG+TGG + Chr7:73388599-73388618 MsG0780040128.01.T01:five_prime_UTR 45.0%
CTCTCCTTGCATTTAGAGAG+AGG + Chr7:73388630-73388649 MsG0780040128.01.T01:five_prime_UTR 45.0%
GACAAAGTGTGAGGAACTGA+AGG + Chr7:73393938-73393957 MsG0780040128.01.T01:CDS 45.0%
GACACCAAAACATCCCCATT+TGG - Chr7:73394071-73394090 None:intergenic 45.0%
GACAGTGAGGTGAAAAGTCA+CGG - Chr7:73390091-73390110 None:intergenic 45.0%
GACTGGGGAGAGTTGTATAA+TGG + Chr7:73394041-73394060 MsG0780040128.01.T01:CDS 45.0%
GCCTAAATATTGTTGTCCGG+TGG + Chr7:73394139-73394158 MsG0780040128.01.T01:CDS 45.0%
GCGATATTGAGAACAGTGAC+AGG - Chr7:73388868-73388887 None:intergenic 45.0%
GCTGGCATATTAGGCTTCAT+AGG + Chr7:73393174-73393193 MsG0780040128.01.T01:intron 45.0%
GGTTAGTGGAATACAAGGGT+GGG + Chr7:73390644-73390663 MsG0780040128.01.T01:intron 45.0%
GTAGCTTATGACTTCCTTGC+TGG + Chr7:73389194-73389213 MsG0780040128.01.T01:CDS 45.0%
GTCACAATGATCCATGACTC+AGG + Chr7:73390108-73390127 MsG0780040128.01.T01:intron 45.0%
GTTGTCCGGTGGTTTATCAT+AGG + Chr7:73394150-73394169 MsG0780040128.01.T01:CDS 45.0%
TACAAAAGACGCACAGAGCA+AGG - Chr7:73392492-73392511 None:intergenic 45.0%
TATACCGCTATGTGTTGTCC+AGG + Chr7:73389394-73389413 MsG0780040128.01.T01:CDS 45.0%
TCCGGTGGTTTATCATAGGA+AGG + Chr7:73394154-73394173 MsG0780040128.01.T01:CDS 45.0%
TCTCGGTCACTATTTGAGGA+GGG - Chr7:73389145-73389164 None:intergenic 45.0%
TCTCTTAACAAGGTTGGGCT+GGG - Chr7:73391008-73391027 None:intergenic 45.0%
TGAGGAGGTGGAATATCCAT+GGG + Chr7:73394112-73394131 MsG0780040128.01.T01:CDS 45.0%
TGGCCTGAAAGCCTATTTAC+AGG + Chr7:73392914-73392933 MsG0780040128.01.T01:intron 45.0%
TGGCTCTTCCTCTGATGAAA+TGG + Chr7:73394243-73394262 MsG0780040128.01.T01:CDS 45.0%
TGGTTAGTGGAATACAAGGG+TGG + Chr7:73390643-73390662 MsG0780040128.01.T01:intron 45.0%
TGTAAATAGGCTTTCAGGCC+AGG - Chr7:73392915-73392934 None:intergenic 45.0%
TGTACCTGGACAACACATAG+CGG - Chr7:73389401-73389420 None:intergenic 45.0%
TGTTTAGGCTTGGCCTAGAT+TGG - Chr7:73393282-73393301 None:intergenic 45.0%
TTCTCGGTCACTATTTGAGG+AGG - Chr7:73389146-73389165 None:intergenic 45.0%
TTCTCTTAACAAGGTTGGGC+TGG - Chr7:73391009-73391028 None:intergenic 45.0%
TTGAAACAAACGCTCCCGAA+GGG - Chr7:73391964-73391983 None:intergenic 45.0%
TTGAGGAGGTGGAATATCCA+TGG + Chr7:73394111-73394130 MsG0780040128.01.T01:CDS 45.0%
TTGTGATGTAGATGTGGGGA+AGG - Chr7:73390922-73390941 None:intergenic 45.0%
TTTAATGGAGGTGAAGGTGG+TGG + Chr7:73394200-73394219 MsG0780040128.01.T01:CDS 45.0%
! CATTGCCAAAAGCGTACACT+GGG + Chr7:73393889-73393908 MsG0780040128.01.T01:CDS 45.0%
! CGTTGGATTAGGATGGTTAG+TGG + Chr7:73390630-73390649 MsG0780040128.01.T01:intron 45.0%
! GATTGCAATGCAGAAGGTGT+TGG + Chr7:73389257-73389276 MsG0780040128.01.T01:CDS 45.0%
! GCTTTTAAATAGGCCAGGTC+AGG - Chr7:73392888-73392907 None:intergenic 45.0%
! TGTCTTCATGGTGGAGGTTA+GGG + Chr7:73394087-73394106 MsG0780040128.01.T01:CDS 45.0%
! TTGATTGGGTTTGGGACGTT+TGG + Chr7:73392313-73392332 MsG0780040128.01.T01:intron 45.0%
!! GAACTCTGAAACCAACAGGT+TGG + Chr7:73389229-73389248 MsG0780040128.01.T01:CDS 45.0%
!! TGTTGGTAGCCAATGAAGCA+AGG - Chr7:73393515-73393534 None:intergenic 45.0%
!! TTCAAGGTTGGTGGATATGG+TGG + Chr7:73393971-73393990 MsG0780040128.01.T01:CDS 45.0%
!!! CCTATTTTTTTGGCCTGACC+TGG + Chr7:73392872-73392891 MsG0780040128.01.T01:intron 45.0%
!!! GGGATGTTTTGGTGTCTTCA+TGG + Chr7:73394075-73394094 MsG0780040128.01.T01:CDS 45.0%
!!! TTTTGGTGTCTTCATGGTGG+AGG + Chr7:73394081-73394100 MsG0780040128.01.T01:CDS 45.0%
!!! TTTTTTCATAGGCCAGGCTC+AGG - Chr7:73392815-73392834 None:intergenic 45.0%
!!! AAAAAAGATATTTAATTTTT+TGG + Chr7:73392719-73392738 MsG0780040128.01.T01:intron 5.0%
!!! AAATTTTCAAAAAAAAAATT+TGG + Chr7:73391266-73391285 MsG0780040128.01.T01:intron 5.0%
!!! AATTTTTAAAATTTTATTCA+TGG + Chr7:73392046-73392065 MsG0780040128.01.T01:intron 5.0%
!!! ATTAAAGTAATTATTTTAAA+AGG - Chr7:73391916-73391935 None:intergenic 5.0%
!!! ATTTTTAAAATTTTATTCAT+GGG + Chr7:73392047-73392066 MsG0780040128.01.T01:intron 5.0%
AAGTGTGGTGGTCTCGCAAT+AGG + Chr7:73393432-73393451 MsG0780040128.01.T01:CDS 50.0%
ACCTTGATCATCTCAGGGTG+GGG - Chr7:73393609-73393628 None:intergenic 50.0%
AGACCAGATCGCTGCTATCA+AGG + Chr7:73390432-73390451 MsG0780040128.01.T01:intron 50.0%
AGGAGGTGGAATATCCATGG+GGG + Chr7:73394114-73394133 MsG0780040128.01.T01:CDS 50.0%
AGGCCAGACCAGACTTTGAT+AGG + Chr7:73392789-73392808 MsG0780040128.01.T01:intron 50.0%
AGGCCTATCAAAGTCTGGTC+TGG - Chr7:73392795-73392814 None:intergenic 50.0%
AGTTCTCTACTCTTGCCCCA+TGG + Chr7:73388679-73388698 MsG0780040128.01.T01:five_prime_UTR 50.0%
ATTAGGGTTGGGAATAGGCC+AGG + Chr7:73392769-73392788 MsG0780040128.01.T01:intron 50.0%
ATTAGGGTTGGGAATTGGCG+AGG - Chr7:73393333-73393352 None:intergenic 50.0%
CAGGAGTTGTCTGTCATGGA+AGG - Chr7:73393556-73393575 None:intergenic 50.0%
CTTCCATGACAGACAACTCC+TGG + Chr7:73393554-73393573 MsG0780040128.01.T01:CDS 50.0%
CTTGAAACAAACGCTCCCGA+AGG - Chr7:73391965-73391984 None:intergenic 50.0%
GACACCAAATCGCAAGTAGC+TGG - Chr7:73392354-73392373 None:intergenic 50.0%
GACCTTGATCATCTCAGGGT+GGG - Chr7:73393610-73393629 None:intergenic 50.0%
GAGGAGGTGGAATATCCATG+GGG + Chr7:73394113-73394132 MsG0780040128.01.T01:CDS 50.0%
GCCTATTTAAAAGCCTGGCC+TGG + Chr7:73392894-73392913 MsG0780040128.01.T01:intron 50.0%
GTACGCTTCGACAAAGTGTG+AGG + Chr7:73393929-73393948 MsG0780040128.01.T01:CDS 50.0%
GTGCCCCGAAGCAATGTTTA+AGG + Chr7:73391723-73391742 MsG0780040128.01.T01:intron 50.0%
TAAACATTGCTTCGGGGCAC+CGG - Chr7:73391723-73391742 None:intergenic 50.0%
TACCTAGGAGAAGCCTCACA+AGG - Chr7:73388568-73388587 None:intergenic 50.0%
TATCAAAGTCTGGTCTGGCC+TGG - Chr7:73392790-73392809 None:intergenic 50.0%
TGGGAAGAGTGGGAAGAAGA+AGG - Chr7:73390361-73390380 None:intergenic 50.0%
TTCCTTGTGAGGCTTCTCCT+AGG + Chr7:73388563-73388582 MsG0780040128.01.T01:five_prime_UTR 50.0%
! ATAGGCCTCTGAAAGGCCAT+AGG - Chr7:73392857-73392876 None:intergenic 50.0%
! ATGGTGGAGGTTAGGGTTTG+AGG + Chr7:73394094-73394113 MsG0780040128.01.T01:CDS 50.0%
! CATCCTTGATAGCAGCGATC+TGG - Chr7:73390438-73390457 None:intergenic 50.0%
! CCAGTGTACGCTTTTGGCAA+TGG - Chr7:73393891-73393910 None:intergenic 50.0%
! CCATTGCCAAAAGCGTACAC+TGG + Chr7:73393888-73393907 MsG0780040128.01.T01:CDS 50.0%
! CTAACGGAGGTACACATCCA+GGG - Chr7:73390151-73390170 None:intergenic 50.0%
! GCATTCCCAGTGTACGCTTT+TGG - Chr7:73393897-73393916 None:intergenic 50.0%
! GCCAGGCCAGGCTTTTAAAT+AGG - Chr7:73392898-73392917 None:intergenic 50.0%
! GCCAGGCTTTTAAATAGGCC+AGG - Chr7:73392893-73392912 None:intergenic 50.0%
! GTGTACGCTTTTGGCAATGG+AGG - Chr7:73393888-73393907 None:intergenic 50.0%
! GTGTCTTCATGGTGGAGGTT+AGG + Chr7:73394086-73394105 MsG0780040128.01.T01:CDS 50.0%
! TGGGCTGGGTATGTGTCTTA+GGG - Chr7:73390994-73391013 None:intergenic 50.0%
! TTGGGCTGGGTATGTGTCTT+AGG - Chr7:73390995-73391014 None:intergenic 50.0%
! TTGGTGGATATGGTGGAGGA+GGG + Chr7:73393978-73393997 MsG0780040128.01.T01:CDS 50.0%
!! AAGGTTGGTGGATATGGTGG+AGG + Chr7:73393974-73393993 MsG0780040128.01.T01:CDS 50.0%
CAGCCAGGAGTTGTCTGTCA+TGG - Chr7:73393560-73393579 None:intergenic 55.0%
CCTTGATCATCTCAGGGTGG+GGG - Chr7:73393608-73393627 None:intergenic 55.0%
CGACCTTGATCATCTCAGGG+TGG - Chr7:73393611-73393630 None:intergenic 55.0%
GACTTTGATAGGCCTGAGCC+TGG + Chr7:73392800-73392819 MsG0780040128.01.T01:intron 55.0%
GAGGTTAGGGTTTGAGGAGG+TGG + Chr7:73394100-73394119 MsG0780040128.01.T01:CDS 55.0%
GGCTCAGGCCTATCAAAGTC+TGG - Chr7:73392800-73392819 None:intergenic 55.0%
GGGGAAGTTGACATGTGGAG+GGG - Chr7:73393589-73393608 None:intergenic 55.0%
GGGGGAAGTTGACATGTGGA+GGG - Chr7:73393590-73393609 None:intergenic 55.0%
GTAGATGTGGGGAAGGCTGT+TGG - Chr7:73390915-73390934 None:intergenic 55.0%
GTGGAGGTTAGGGTTTGAGG+AGG + Chr7:73394097-73394116 MsG0780040128.01.T01:CDS 55.0%
TGCGAGACCACCACACTTGA+AGG - Chr7:73393430-73393449 None:intergenic 55.0%
TGGGGGAAGTTGACATGTGG+AGG - Chr7:73393591-73393610 None:intergenic 55.0%
! GCTAACGGAGGTACACATCC+AGG - Chr7:73390152-73390171 None:intergenic 55.0%
! GTTGGTGGATATGGTGGAGG+AGG + Chr7:73393977-73393996 MsG0780040128.01.T01:CDS 55.0%
! TTGGGTTTGGGACGTTTGGC+TGG + Chr7:73392317-73392336 MsG0780040128.01.T01:intron 55.0%
AAAGGCCATAGGCCAGGCTC+AGG - Chr7:73392846-73392865 None:intergenic 60.0%
AGGCCAAGCCTAAACAGGCC+AGG + Chr7:73393286-73393305 MsG0780040128.01.T01:intron 60.0%
ATAGGCTTTCAGGCCAGGCC+AGG - Chr7:73392910-73392929 None:intergenic 60.0%
CCCCCACCCTGAGATGATCA+AGG + Chr7:73393605-73393624 MsG0780040128.01.T01:CDS 60.0%
CCTGGCCTATGGCCTTTCAG+AGG + Chr7:73392849-73392868 MsG0780040128.01.T01:intron 60.0%
GGGTGGGGGAAGTTGACATG+TGG - Chr7:73393594-73393613 None:intergenic 60.0%
! CCTCTGAAAGGCCATAGGCC+AGG - Chr7:73392852-73392871 None:intergenic 60.0%
! GGAGGTGAAGGTGGTGGTGA+TGG + Chr7:73394206-73394225 MsG0780040128.01.T01:CDS 60.0%
CGGCCTGGCCTGTTTAGGCT+TGG - Chr7:73393292-73393311 None:intergenic 65.0%
GCAAGCCTGAGCCTGGCCTA+TGG + Chr7:73392838-73392857 MsG0780040128.01.T01:intron 65.0%
GCCTAAACAGGCCAGGCCGT+AGG + Chr7:73393293-73393312 MsG0780040128.01.T01:intron 65.0%
GCCTACGGCCTGGCCTGTTT+AGG - Chr7:73393297-73393316 None:intergenic 65.0%
GGGTTGGGAATTGGCGAGGC+CGG - Chr7:73393329-73393348 None:intergenic 65.0%
GCCAGGCCGTAGGCCACTGT+AGG + Chr7:73393303-73393322 MsG0780040128.01.T01:intron 70.0%
GCCTACAGTGGCCTACGGCC+TGG - Chr7:73393307-73393326 None:intergenic 70.0%
GGCCGGCCTACAGTGGCCTA+CGG - Chr7:73393312-73393331 None:intergenic 70.0%
GGCCGTAGGCCACTGTAGGC+CGG + Chr7:73393307-73393326 MsG0780040128.01.T01:intron 70.0%
GTGGAGGGGATCGTGCAGCC+AGG - Chr7:73393575-73393594 None:intergenic 70.0%
TTGGCGAGGCCGGCCTACAG+TGG - Chr7:73393319-73393338 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 73388480 73394656 73388480 ID=MsG0780040128.01;Name=MsG0780040128.01
Chr7 mRNA 73388480 73394656 73388480 ID=MsG0780040128.01.T01;Parent=MsG0780040128.01;Name=MsG0780040128.01.T01;_AED=0.13;_eAED=0.13;_QI=480|1|1|1|1|1|2|358|444
Chr7 exon 73388480 73389415 73388480 ID=MsG0780040128.01.T01:exon:13244;Parent=MsG0780040128.01.T01
Chr7 exon 73393420 73394656 73393420 ID=MsG0780040128.01.T01:exon:13245;Parent=MsG0780040128.01.T01
Chr7 five_prime_UTR 73388480 73388959 73388480 ID=MsG0780040128.01.T01:five_prime_utr;Parent=MsG0780040128.01.T01
Chr7 CDS 73388960 73389415 73388960 ID=MsG0780040128.01.T01:cds;Parent=MsG0780040128.01.T01
Chr7 CDS 73393420 73394298 73393420 ID=MsG0780040128.01.T01:cds;Parent=MsG0780040128.01.T01
Chr7 three_prime_UTR 73394299 73394656 73394299 ID=MsG0780040128.01.T01:three_prime_utr;Parent=MsG0780040128.01.T01
Gene Sequence

>MsG0780040128.01.T01

ATGGGAACCACTAGCCAAGAAACTATACCTCTTCTTCAAGACATGAAGGTGACAATCCACAAAACTTCAATGATTTTTCCATCAAAACAAATCGAAAAGAAATCCTTGTTCTTATCAAACATAGACAAGGTTCTCGATTTTCACGTGAAAACGGTTCAATTCTTCGAAGCAAACAAAGATTTCCCTCCTCAAATAGTGACCGAGAAGTTAAAGAAAGCTTTAGAAGATGCTCTAGTAGCTTATGACTTCCTTGCTGGAAGATTAAAGATGAACTCTGAAACCAACAGGTTGGAAATAGATTGCAATGCAGAAGGTGTTGGTTTTGTTGTGGCTTCTAGTGAATACAAATTGGATCAAATTGGAAACTTGGGTTATCCTAATCAAGCTTTTGGACAATTTGTTCACAATGCAAAAGATTTCCATAAGATAGGTGATATACCGCTATGTGTTGTCCAGCTAACATCCTTCAAGTGTGGTGGTCTCGCAATAGGCTTCACAACAAGCCATGCAATCTTTGACGGACTTAGCTTTAAAAATTTCTTAGACAACCTTGCTTCATTGGCTACCAACATGCAATTGACTGTGACACCCTTCCATGACAGACAACTCCTGGCTGCACGATCCCCTCCACATGTCAACTTCCCCCACCCTGAGATGATCAAGGTCGATAATCTACCTTTAGGCATTAAATCTGGTGTCTTTGAAGCATCCTCAGAAGAACTTGACTTCATGGTTTTTCAACTGACATATGAAGATATCAACAACCTTAAGGAAAAGGCAAAAGGTAATAACACCTCTCGTGTCAACAGTTTTAATGTTGTCACCGCACATATATGGAGATGTAAAGCATTGTCTAAATCATACGATCCTAATAGATCATCTGCTATTTTGTATGCGGTTGATATACGTTCAAGATTTAATCCTCCATTGCCAAAAGCGTACACTGGGAATGCAGTATTAACAGCGTACGCTTCGACAAAGTGTGAGGAACTGAAGGAAGGTGAATTTTCAAGGTTGGTGGATATGGTGGAGGAGGGTTCAAGAAGAATGAGTGATGAGTATGCAAGATCTATTATTGACTGGGGAGAGTTGTATAATGGTTTTCCAAATGGGGATGTTTTGGTGTCTTCATGGTGGAGGTTAGGGTTTGAGGAGGTGGAATATCCATGGGGGAAGCCTAAATATTGTTGTCCGGTGGTTTATCATAGGAAGGATATTATACTATTAGTTCCTTCTTTTAATGGAGGTGAAGGTGGTGGTGATGGAGTAAATATTATAGTGGCTCTTCCTCTGATGAAATGGAAAAATTTAAGAGTTTATTTTACACTTTTTTGA
Protein sequence

>MsG0780040128.01.T01

MGTTSQETIPLLQDMKVTIHKTSMIFPSKQIEKKSLFLSNIDKVLDFHVKTVQFFEANKDFPPQIVTEKLKKALEDALVAYDFLAGRLKMNSETNRLEIDCNAEGVGFVVASSEYKLDQIGNLGYPNQAFGQFVHNAKDFHKIGDIPLCVVQLTSFKCGGLAIGFTTSHAIFDGLSFKNFLDNLASLATNMQLTVTPFHDRQLLAARSPPHVNFPHPEMIKVDNLPLGIKSGVFEASSEELDFMVFQLTYEDINNLKEKAKGNNTSRVNSFNVVTAHIWRCKALSKSYDPNRSSAILYAVDIRSRFNPPLPKAYTGNAVLTAYASTKCEELKEGEFSRLVDMVEEGSRRMSDEYARSIIDWGELYNGFPNGDVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHRKDIILLVPSFNGGEGGGDGVNIIVALPLMKWKNLRVYFTLF*