AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040263.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040263.01.T01 MTR_7g086780 96.462 424 13 1 3 426 1 422 0.0 849
MsG0780040263.01.T01 MTR_6g027460 50.267 374 139 9 8 350 10 367 8.69e-106 318
MsG0780040263.01.T01 MTR_6g027450 47.230 343 142 9 8 335 10 328 6.38e-93 283
MsG0780040263.01.T01 MTR_6g012450 34.747 495 222 17 8 425 5 475 5.74e-64 214
MsG0780040263.01.T01 MTR_7g010950 35.520 442 208 15 38 425 67 485 5.30e-55 190
MsG0780040263.01.T01 MTR_4g082060 32.041 490 229 16 8 424 5 463 1.74e-54 188
MsG0780040263.01.T01 MTR_8g044220 32.558 473 227 14 5 426 8 439 9.24e-54 185
MsG0780040263.01.T01 MTR_3g435480 34.078 358 188 8 83 421 116 444 2.22e-49 174
MsG0780040263.01.T01 MTR_2g016030 56.000 100 37 1 97 196 41 133 5.22e-32 119
MsG0780040263.01.T01 MTR_5g041420 65.116 86 24 1 86 165 121 206 1.54e-31 123
MsG0780040263.01.T01 MTR_5g041380 31.594 345 127 15 97 426 121 371 2.59e-31 123
MsG0780040263.01.T01 MTR_5g041400 30.117 342 136 11 97 426 113 363 1.06e-30 121
MsG0780040263.01.T01 MTR_5g041530 69.014 71 22 0 86 156 123 193 3.98e-28 114
MsG0780040263.01.T01 MTR_8g068210 51.807 83 39 1 77 158 5 87 9.85e-25 104
MsG0780040263.01.T01 MTR_8g027295 61.905 63 24 0 98 160 19 81 1.31e-24 102
MsG0780040263.01.T01 MTR_3g091820 55.556 81 30 1 77 157 23 97 1.38e-24 103
MsG0780040263.01.T01 MTR_8g479350 57.534 73 31 0 103 175 68 140 2.41e-24 103
MsG0780040263.01.T01 MTR_4g022370 65.517 58 20 0 99 156 78 135 7.38e-24 102
MsG0780040263.01.T01 MTR_8g079060 38.462 130 55 3 58 187 3 107 8.10e-24 99.4
MsG0780040263.01.T01 MTR_2g059540 73.469 49 13 0 103 151 31 79 8.48e-24 99.0
MsG0780040263.01.T01 MTR_2g093220 66.102 59 20 0 98 156 35 93 1.62e-23 100
MsG0780040263.01.T01 MTR_2g096740 56.000 75 33 0 82 156 41 115 2.11e-23 99.8
MsG0780040263.01.T01 MTR_2g096740 56.000 75 33 0 82 156 56 130 2.14e-23 100
MsG0780040263.01.T01 MTR_4g063780 37.903 124 74 2 90 211 60 182 3.79e-23 99.8
MsG0780040263.01.T01 MTR_4g088580 70.909 55 16 0 104 158 56 110 4.70e-23 100
MsG0780040263.01.T01 MTR_8g015840 69.231 52 16 0 103 154 20 71 6.03e-23 96.7
MsG0780040263.01.T01 MTR_4g109980 67.925 53 17 0 101 153 38 90 8.96e-23 98.6
MsG0780040263.01.T01 MTR_4g461080 62.121 66 24 1 91 155 16 81 1.92e-22 96.7
MsG0780040263.01.T01 MTR_1g077600 51.899 79 33 1 82 155 17 95 2.65e-22 96.7
MsG0780040263.01.T01 MTR_1g077600 51.899 79 33 1 82 155 17 95 2.81e-22 96.3
MsG0780040263.01.T01 MTR_2g014060 59.375 64 26 0 91 154 13 76 3.51e-22 97.1
MsG0780040263.01.T01 MTR_7g059400 38.760 129 66 2 91 217 62 179 3.64e-22 97.4
MsG0780040263.01.T01 MTR_7g024670 69.091 55 16 1 104 157 78 132 2.51e-21 95.1
MsG0780040263.01.T01 MTR_5g031440 65.455 55 19 0 99 153 39 93 2.66e-21 94.7
MsG0780040263.01.T01 MTR_2g013370 67.857 56 17 1 103 158 46 100 3.11e-21 93.2
MsG0780040263.01.T01 MTR_4g089095 66.071 56 18 1 103 158 50 104 4.04e-21 93.6
MsG0780040263.01.T01 MTR_4g089095 66.071 56 18 1 103 158 16 70 4.87e-21 92.4
MsG0780040263.01.T01 MTR_3g090430 67.308 52 17 0 105 156 53 104 5.24e-21 93.6
MsG0780040263.01.T01 MTR_2g014170 69.388 49 15 0 103 151 45 93 7.75e-21 92.8
MsG0780040263.01.T01 MTR_1g056810 67.308 52 17 0 105 156 14 65 9.45e-21 92.0
MsG0780040263.01.T01 MTR_3g077750 58.065 62 25 1 93 153 50 111 3.03e-20 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040263.01.T01 AT5G39660 37.366 372 175 15 40 393 77 408 4.47e-53 184
MsG0780040263.01.T01 AT5G39660 37.366 372 175 15 40 393 77 408 4.47e-53 184
MsG0780040263.01.T01 AT5G39660 37.366 372 175 15 40 393 77 408 4.47e-53 184
MsG0780040263.01.T01 AT3G47500 31.546 485 234 15 3 426 1 448 5.61e-50 176
MsG0780040263.01.T01 AT5G62430 42.424 198 65 5 82 277 33 183 1.34e-37 139
MsG0780040263.01.T01 AT1G26790 45.143 175 88 5 1 169 5 177 1.97e-34 132
MsG0780040263.01.T01 AT1G29160 81.667 60 11 0 97 156 56 115 8.36e-33 122
MsG0780040263.01.T01 AT2G34140 64.198 81 29 0 97 177 52 132 1.44e-32 121
MsG0780040263.01.T01 AT1G69570 65.823 79 27 0 91 169 120 198 3.76e-32 126
MsG0780040263.01.T01 AT3G55370 57.143 70 30 0 99 168 72 141 9.35e-25 104
MsG0780040263.01.T01 AT3G55370 57.143 70 30 0 99 168 72 141 1.16e-24 104
MsG0780040263.01.T01 AT3G55370 57.143 70 30 0 99 168 117 186 1.88e-24 104
MsG0780040263.01.T01 AT5G60850 54.762 84 32 2 103 186 51 128 2.87e-24 102
MsG0780040263.01.T01 AT5G60200 56.338 71 31 0 99 169 51 121 4.47e-24 100
MsG0780040263.01.T01 AT1G51700 69.231 52 16 0 103 154 33 84 4.79e-24 99.4
MsG0780040263.01.T01 AT4G24060 44.444 117 60 2 100 214 50 163 1.41e-23 101
MsG0780040263.01.T01 AT3G61850 64.407 59 21 0 98 156 57 115 1.51e-23 100
MsG0780040263.01.T01 AT3G61850 64.407 59 21 0 98 156 57 115 1.51e-23 100
MsG0780040263.01.T01 AT3G61850 64.407 59 21 0 98 156 69 127 2.11e-23 100
MsG0780040263.01.T01 AT3G61850 64.407 59 21 0 98 156 57 115 2.47e-23 100
MsG0780040263.01.T01 AT2G28810 66.071 56 19 0 99 154 73 128 2.77e-23 100
MsG0780040263.01.T01 AT3G61850 64.407 59 21 0 98 156 69 127 3.32e-23 100
MsG0780040263.01.T01 AT3G21270 69.811 53 16 0 103 155 29 81 3.54e-23 97.1
MsG0780040263.01.T01 AT2G28810 66.071 56 19 0 99 154 90 145 4.85e-23 99.8
MsG0780040263.01.T01 AT3G45610 52.857 70 33 0 99 168 36 105 5.79e-23 97.4
MsG0780040263.01.T01 AT2G37590 63.793 58 21 0 99 156 85 142 6.08e-23 99.4
MsG0780040263.01.T01 AT1G07640 69.091 55 16 1 103 156 21 75 1.20e-22 97.4
MsG0780040263.01.T01 AT1G07640 69.091 55 16 1 103 156 77 131 1.68e-22 98.2
MsG0780040263.01.T01 AT4G00940 56.944 72 27 1 91 158 52 123 2.12e-22 97.1
MsG0780040263.01.T01 AT4G00940 56.944 72 27 1 91 158 52 123 2.12e-22 97.1
MsG0780040263.01.T01 AT4G00940 56.944 72 27 1 91 158 52 123 2.12e-22 97.1
MsG0780040263.01.T01 AT1G28310 68.519 54 17 0 103 156 27 80 2.12e-22 97.4
MsG0780040263.01.T01 AT1G07640 69.091 55 16 1 103 156 85 139 2.25e-22 97.8
MsG0780040263.01.T01 AT5G65590 70.370 54 16 0 103 156 41 94 2.45e-22 97.4
MsG0780040263.01.T01 AT1G28310 68.519 54 17 0 103 156 51 104 3.14e-22 97.4
MsG0780040263.01.T01 AT5G02460 44.898 98 53 1 99 195 91 188 4.44e-22 97.8
MsG0780040263.01.T01 AT1G64620 65.385 52 18 0 100 151 46 97 5.89e-22 97.1
MsG0780040263.01.T01 AT3G50410 70.588 51 15 0 105 155 32 82 5.90e-22 94.7
MsG0780040263.01.T01 AT4G38000 66.071 56 18 1 102 156 40 95 8.17e-22 94.4
MsG0780040263.01.T01 AT5G66940 50.000 80 33 1 90 169 26 98 8.27e-22 94.0
MsG0780040263.01.T01 AT2G28510 66.071 56 19 0 105 160 50 105 1.64e-21 94.4
MsG0780040263.01.T01 AT4G21050 40.800 125 59 3 76 198 4 115 2.91e-21 92.0
MsG0780040263.01.T01 AT2G46590 62.264 53 20 0 98 150 63 115 1.18e-20 93.2
MsG0780040263.01.T01 AT3G52440 65.385 52 18 0 105 156 27 78 1.24e-20 90.9
MsG0780040263.01.T01 AT2G46590 62.264 53 20 0 98 150 75 127 1.48e-20 93.2
MsG0780040263.01.T01 AT3G52440 65.385 52 18 0 105 156 46 97 1.53e-20 91.3
MsG0780040263.01.T01 AT1G21340 66.000 50 17 0 105 154 40 89 3.34e-20 90.1
MsG0780040263.01.T01 AT1G47655 70.213 47 14 0 105 151 31 77 3.69e-20 88.6
MsG0780040263.01.T01 AT5G62940 57.812 64 26 1 91 153 60 123 8.77e-20 90.9
MsG0780040263.01.T01 AT4G21040 63.462 52 19 0 105 156 27 78 6.48e-18 82.8
MsG0780040263.01.T01 AT4G21080 57.895 57 24 0 105 161 27 83 2.60e-17 81.6
MsG0780040263.01.T01 AT4G21030 59.091 44 18 0 105 148 23 66 2.80e-11 62.8

Find 122 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTCTTCATTAGGCTTCT+TGG 0.163517 7:-75090703 None:intergenic
TTTGGGTGGCTCTCAGATTT+TGG 0.205376 7:+75090737 MsG0780040263.01.T01:CDS
GATCATGGTATTATGCTATT+TGG 0.221788 7:+75088512 MsG0780040263.01.T01:CDS
AACGAGACTGTATTGAAATT+TGG 0.235896 7:+75090105 MsG0780040263.01.T01:CDS
TGTCCAATTCCGGCCAATTC+TGG 0.261036 7:+75088557 MsG0780040263.01.T01:CDS
TACTTCATTTCCTTGATTGC+CGG 0.302888 7:-75090265 None:intergenic
AAAATTATTATATGCTTTCC+TGG 0.315121 7:-75090797 None:intergenic
TATCTCTATTGTGCTTTCCT+AGG 0.318213 7:-75090569 None:intergenic
GTGGGCTTGGAATTTACTAT+TGG 0.321756 7:-75089751 None:intergenic
GGTCCAGAATTGGCCGGAAT+TGG 0.321957 7:-75088560 None:intergenic
CGTGTTATCTTCGGTGGGCT+TGG 0.325634 7:-75089764 None:intergenic
TAAACCCTCTGAAAGTAAAA+AGG 0.329063 7:-75088256 None:intergenic
GCTATTTGGTTGGAAGATTC+CGG 0.345460 7:+75088526 MsG0780040263.01.T01:CDS
GATTCGCAAAGAGGGGTATC+AGG 0.380348 7:-75090129 None:intergenic
AGAAGGAAAAGACGGTGTTT+TGG 0.384688 7:+75090719 MsG0780040263.01.T01:CDS
ACACCTATGTTGGCAATTCC+AGG 0.386307 7:+75090423 MsG0780040263.01.T01:CDS
CAGAACACAATGCATCAAAT+TGG 0.395828 7:+75090289 MsG0780040263.01.T01:CDS
TTTATCTTGATCCGTATTAC+CGG 0.399758 7:-75089791 None:intergenic
GGTAGTACCCATGGAGAAAC+AGG 0.400241 7:-75090324 None:intergenic
TTGGAATAATGTTGCTTCAA+TGG 0.402306 7:+75090359 MsG0780040263.01.T01:CDS
CACCAGCAGTCCAGTACCTT+TGG 0.404005 7:-75089930 None:intergenic
TTATTCCAACCTGGATTCAT+TGG 0.406197 7:-75090345 None:intergenic
AGACAATTCTTCTGATTCAA+TGG 0.409932 7:+75089696 MsG0780040263.01.T01:CDS
TTGGCCGGAATTGGACATTC+CGG 0.413804 7:-75088551 None:intergenic
TCGTGGTTACTATAATTTGC+CGG 0.419212 7:-75090017 None:intergenic
ACAAGTAACAGTTGCTGCTC+AGG 0.422483 7:+75090531 MsG0780040263.01.T01:CDS
ATCTCTATTGTGCTTTCCTA+GGG 0.423915 7:-75090568 None:intergenic
GGACACTGAACAATCTTGTC+TGG 0.427093 7:-75089826 None:intergenic
AACAGTTGCTGCTCAGGAAA+TGG 0.428682 7:+75090537 MsG0780040263.01.T01:CDS
CTATTGTGCTTTCCTAGGGT+TGG 0.437965 7:-75090564 None:intergenic
GCAAGAACTGCCAAAGGTAC+TGG 0.438215 7:+75089920 MsG0780040263.01.T01:CDS
AATAAACTAGTACATATTGC+TGG 0.439570 7:+75090854 MsG0780040263.01.T01:three_prime_UTR
TAAAACAGACAAGTGTGTTC+CGG 0.446244 7:+75090611 MsG0780040263.01.T01:CDS
CAGTCTCGAAAAGTCCTATC+CGG 0.447133 7:+75090667 MsG0780040263.01.T01:CDS
ATGTACCATGGGTCCAGAAT+TGG 0.447645 7:-75088570 None:intergenic
ACCGGTCTCCGTGTTATCTT+CGG 0.448248 7:-75089773 None:intergenic
TTCCGATAGGTGCTGGGAGG+CGG 0.450898 7:+75089968 MsG0780040263.01.T01:CDS
AGAAATGTTCCGATAGGTGC+TGG 0.459160 7:+75089961 MsG0780040263.01.T01:CDS
ATGGTATTATGCTATTTGGT+TGG 0.461686 7:+75088516 MsG0780040263.01.T01:CDS
TGGTTGGAAGATTCCGGTGC+CGG 0.462466 7:+75088532 MsG0780040263.01.T01:CDS
TTTAAGGTAGCATTGATTTG+TGG 0.465805 7:+75090901 MsG0780040263.01.T01:three_prime_UTR
TACCCCTCTTTGCGAATCAA+TGG 0.468240 7:+75090134 MsG0780040263.01.T01:CDS
ACAAGAGTCTATACCAGAAA+AGG 0.468668 7:+75089726 MsG0780040263.01.T01:CDS
TAACACGGAGACCGGTAATA+CGG 0.475853 7:+75089780 MsG0780040263.01.T01:CDS
GGTGCCGGAATGTCCAATTC+CGG 0.477329 7:+75088547 MsG0780040263.01.T01:CDS
GTGTTATCCTGTTTCTCCAT+GGG 0.479488 7:+75090317 MsG0780040263.01.T01:CDS
AGGATACTTGCAGCAGTACA+AGG 0.490268 7:+75089629 MsG0780040263.01.T01:intron
GTAACAAACACCGGCAATCA+AGG 0.493046 7:+75090255 MsG0780040263.01.T01:CDS
AGTGTTATCCTGTTTCTCCA+TGG 0.495037 7:+75090316 MsG0780040263.01.T01:CDS
GGAATTGGACATTCCGGCAC+CGG 0.499395 7:-75088545 None:intergenic
ACCAAGAAGCCTAATGAAGA+AGG 0.504636 7:+75090702 MsG0780040263.01.T01:CDS
GTCTCCGTGTTATCTTCGGT+GGG 0.507024 7:-75089769 None:intergenic
AGAAGAATTGTCTTGTTGCT+CGG 0.510082 7:-75089686 None:intergenic
AGCACCTAGCCTCTCAATAC+CGG 0.512664 7:+75089998 MsG0780040263.01.T01:CDS
CGTGGTTGGAACTCCATTCG+TGG 0.513560 7:-75090034 None:intergenic
TTCTCATGCTCATACAATCC+AGG 0.520401 7:+75090779 MsG0780040263.01.T01:CDS
CAATACAGTCTCGTTATCCA+TGG 0.528405 7:-75090097 None:intergenic
TTCCGCCTCCCAGCACCTAT+CGG 0.529039 7:-75089970 None:intergenic
TGCCAAAGGTACTGGACTGC+TGG 0.529099 7:+75089928 MsG0780040263.01.T01:CDS
GTAGTTTCTAGCCTCGTGGT+TGG 0.531644 7:-75090048 None:intergenic
TATAATTTGCCGGTATTGAG+AGG 0.538214 7:-75090007 None:intergenic
ACCGAAGATAACACGGAGAC+CGG 0.539518 7:+75089772 MsG0780040263.01.T01:CDS
GGAATTGCCAACATAGGTGT+TGG 0.540068 7:-75090420 None:intergenic
GTGTCCGCGATGCAACAGTT+GGG 0.540349 7:+75089843 MsG0780040263.01.T01:CDS
GTTGTTGAAATAACAAAACT+TGG 0.540457 7:-75089869 None:intergenic
TCTCAGACTCAGAAGGATCA+TGG 0.542010 7:+75088497 MsG0780040263.01.T01:CDS
ATTCCATTGATTCGCAAAGA+GGG 0.549386 7:-75090137 None:intergenic
CGATCACCACCACACATCCA+TGG 0.550071 7:+75090080 MsG0780040263.01.T01:CDS
GGATTCATTGGTAGTACCCA+TGG 0.554215 7:-75090333 None:intergenic
GTAGCTAATGTAGCCCGGAT+AGG 0.554980 7:-75090681 None:intergenic
GGTCTCCGTGTTATCTTCGG+TGG 0.555105 7:-75089770 None:intergenic
ATGAGAAATAGCTCCTGAGC+TGG 0.556629 7:-75090763 None:intergenic
CATGGATGTGTGGTGGTGAT+CGG 0.559985 7:-75090079 None:intergenic
GGAAATGGCTCACCAACCCT+AGG 0.561749 7:+75090552 MsG0780040263.01.T01:CDS
CAGTTCTTGCAGAAATGTCG+AGG 0.563164 7:-75089907 None:intergenic
CGACTTCGGCATCCATGCAA+TGG 0.568776 7:+75090394 MsG0780040263.01.T01:CDS
GATTCCATTGATTCGCAAAG+AGG 0.571846 7:-75090138 None:intergenic
TCTTGGTAGCTAATGTAGCC+CGG 0.573000 7:-75090686 None:intergenic
AACTTGTAGCAGCATCACAT+TGG 0.575411 7:+75090472 MsG0780040263.01.T01:CDS
AGAACTGTTTGAATTTGCAT+CGG 0.575677 7:-75090193 None:intergenic
AGTGTCCGCGATGCAACAGT+TGG 0.576096 7:+75089842 MsG0780040263.01.T01:CDS
GGCAGCAGTTCATCCGACTT+CGG 0.576744 7:+75090380 MsG0780040263.01.T01:CDS
CAAATTATAGTAACCACGAA+TGG 0.580675 7:+75090021 MsG0780040263.01.T01:CDS
TCCGGCCAATTCTGGACCCA+TGG 0.581876 7:+75088565 MsG0780040263.01.T01:CDS
GCAGCAACTGTTACTTGTAG+AGG 0.584099 7:-75090526 None:intergenic
TGGGTACTACCAATGAATCC+AGG 0.586175 7:+75090336 MsG0780040263.01.T01:CDS
CATTGCATGGATGCCGAAGT+CGG 0.595329 7:-75090393 None:intergenic
AGTCTCGAAAAGTCCTATCC+GGG 0.597281 7:+75090668 MsG0780040263.01.T01:CDS
ATTCCTGGAATTGCCAACAT+AGG 0.597632 7:-75090426 None:intergenic
AGAGAGGAACCGTCCTTGTG+TGG 0.598119 7:+75090225 MsG0780040263.01.T01:CDS
TACTACCAATGAATCCAGGT+TGG 0.601762 7:+75090340 MsG0780040263.01.T01:CDS
CAGTTCTGTGCAACATAGAG+AGG 0.603480 7:+75090209 MsG0780040263.01.T01:CDS
CCTAATGAAGAAGGAAAAGA+CGG 0.611817 7:+75090711 MsG0780040263.01.T01:CDS
GAAATGTTCCGATAGGTGCT+GGG 0.612734 7:+75089962 MsG0780040263.01.T01:CDS
GGCGGCGAGAGGCAAAGTGA+TGG 0.613227 7:-75090501 None:intergenic
TTCCATTGATTCGCAAAGAG+GGG 0.615780 7:-75090136 None:intergenic
GATGCTGCTACAAGTTGTAA+AGG 0.617256 7:-75090465 None:intergenic
CAGTACAAGGAAAACAGAAG+TGG 0.617838 7:+75089642 MsG0780040263.01.T01:CDS
GAAGCAACATTATTCCAACC+TGG 0.621410 7:-75090354 None:intergenic
GAACATGTCTCAGACTCAGA+AGG 0.626037 7:+75088490 MsG0780040263.01.T01:CDS
CAAGCCCACCGAAGATAACA+CGG 0.626181 7:+75089765 MsG0780040263.01.T01:CDS
TTGTAGAGGAAGGCGGCGAG+AGG 0.626239 7:-75090512 None:intergenic
TTTGCCGGTATTGAGAGGCT+AGG 0.626885 7:-75090002 None:intergenic
ATGGTGTCCAACACCTATGT+TGG 0.630522 7:+75090413 MsG0780040263.01.T01:CDS
CAACTGTTACTTGTAGAGGA+AGG 0.635921 7:-75090522 None:intergenic
GTTTGTAGTTTCTAGCCTCG+TGG 0.637790 7:-75090052 None:intergenic
AGGTGTTGGACACCATTGCA+TGG 0.641634 7:-75090406 None:intergenic
CAAAGGTACTGGACTGCTGG+TGG 0.641821 7:+75089931 MsG0780040263.01.T01:CDS
ACGATGAGAAATGTTCCGAT+AGG 0.643759 7:+75089955 MsG0780040263.01.T01:CDS
AAACATTGCAAGAGAAACGA+AGG 0.645020 7:-75090877 None:intergenic
GGATCTTCTGTAACAAACAC+CGG 0.647048 7:+75090246 MsG0780040263.01.T01:CDS
CGTTATCCATGGATGTGTGG+TGG 0.660626 7:-75090086 None:intergenic
ACAGAAGATCCACACAAGGA+CGG 0.669016 7:-75090234 None:intergenic
ACCATGGGTCCAGAATTGGC+CGG 0.674302 7:-75088566 None:intergenic
GTAGCAGCATCACATTGGAG+TGG 0.674545 7:+75090477 MsG0780040263.01.T01:CDS
CTGTTACTTGTAGAGGAAGG+CGG 0.676133 7:-75090519 None:intergenic
ATTTCTGCAAGAACTGCCAA+AGG 0.677880 7:+75089914 MsG0780040263.01.T01:CDS
TCTCGTTATCCATGGATGTG+TGG 0.680622 7:-75090089 None:intergenic
CGAATGGAGTTCCAACCACG+AGG 0.695228 7:+75090037 MsG0780040263.01.T01:CDS
GTGTCCCAACTGTTGCATCG+CGG 0.715720 7:-75089847 None:intergenic
TGTTACAGAAGATCCACACA+AGG 0.727736 7:-75090238 None:intergenic
ATGTTCCGATAGGTGCTGGG+AGG 0.729596 7:+75089965 MsG0780040263.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTGATTTTTGTAATTCT+TGG + Chr7:75089163-75089182 MsG0780040263.01.T01:intron 15.0%
!!! TATTTTGTTTGTTTTCTTAT+GGG + Chr7:75088722-75088741 MsG0780040263.01.T01:intron 15.0%
!!! TTATTTTGTTTGTTTTCTTA+TGG + Chr7:75088721-75088740 MsG0780040263.01.T01:intron 15.0%
!! AAAATTATTATATGCTTTCC+TGG - Chr7:75090800-75090819 None:intergenic 20.0%
!! TATAGTTATATATGTACCAT+GGG - Chr7:75088584-75088603 None:intergenic 20.0%
!! TATATGTTGCATATGAAAAT+GGG + Chr7:75088677-75088696 MsG0780040263.01.T01:intron 20.0%
!! TTATAGTTATATATGTACCA+TGG - Chr7:75088585-75088604 None:intergenic 20.0%
!!! ATTTTGTTTGTTTTCTTATG+GGG + Chr7:75088723-75088742 MsG0780040263.01.T01:intron 20.0%
!!! CTGTTTTTATGTTTTTTTGA+AGG + Chr7:75088432-75088451 MsG0780040263.01.T01:five_prime_UTR 20.0%
!!! TAATTCGTGGTTTAAATTTT+AGG + Chr7:75089609-75089628 MsG0780040263.01.T01:intron 20.0%
!!! TCTTTATGTTTTAATTGTGA+TGG + Chr7:75089087-75089106 MsG0780040263.01.T01:intron 20.0%
!!! TTTTTTATGATGATTTCTCT+TGG + Chr7:75089264-75089283 MsG0780040263.01.T01:intron 20.0%
! AAACATAAAAACAGAAACAG+AGG - Chr7:75088426-75088445 None:intergenic 25.0%
! AATAAACTAGTACATATTGC+TGG + Chr7:75090854-75090873 MsG0780040263.01.T01:three_prime_UTR 25.0%
! ATTCATCAATCATCAATCAT+TGG - Chr7:75089037-75089056 None:intergenic 25.0%
! CAATATAATGTAAACAAAGG+CGG + Chr7:75088989-75089008 MsG0780040263.01.T01:intron 25.0%
! CATTTGTACACTTAATTTCT+AGG + Chr7:75089237-75089256 MsG0780040263.01.T01:intron 25.0%
! GACCAATATAATGTAAACAA+AGG + Chr7:75088986-75089005 MsG0780040263.01.T01:intron 25.0%
! GTATATGTTGCATATGAAAA+TGG + Chr7:75088676-75088695 MsG0780040263.01.T01:intron 25.0%
! GTTGTTGAAATAACAAAACT+TGG - Chr7:75089872-75089891 None:intergenic 25.0%
!! AAAACAAGACAACTTTTGAA+AGG - Chr7:75088311-75088330 None:intergenic 25.0%
!!! AAACAAGACAACTTTTGAAA+GGG - Chr7:75088310-75088329 None:intergenic 25.0%
!!! AGGATAATTTTGTTTCTTAG+TGG + Chr7:75088809-75088828 MsG0780040263.01.T01:intron 25.0%
!!! AGTTGTAAAGGTATATTTTG+TGG - Chr7:75090456-75090475 None:intergenic 25.0%
!!! ATAATTTTGTTTCTTAGTGG+AGG + Chr7:75088812-75088831 MsG0780040263.01.T01:intron 25.0%
!!! TCTCTTGCAATGTTTTTTTA+AGG + Chr7:75090885-75090904 MsG0780040263.01.T01:three_prime_UTR 25.0%
AACGAGACTGTATTGAAATT+TGG + Chr7:75090105-75090124 MsG0780040263.01.T01:CDS 30.0%
ACAACAAATTCTCACATAAC+AGG - Chr7:75089497-75089516 None:intergenic 30.0%
AGAACTGTTTGAATTTGCAT+CGG - Chr7:75090196-75090215 None:intergenic 30.0%
AGACAATTCTTCTGATTCAA+TGG + Chr7:75089696-75089715 MsG0780040263.01.T01:CDS 30.0%
CAAATTATAGTAACCACGAA+TGG + Chr7:75090021-75090040 MsG0780040263.01.T01:CDS 30.0%
CTTAGTTTATCACTAATTCG+TGG + Chr7:75089596-75089615 MsG0780040263.01.T01:intron 30.0%
GACTAAAGATTGTTATAGTC+CGG - Chr7:75088912-75088931 None:intergenic 30.0%
GATCATGGTATTATGCTATT+TGG + Chr7:75088512-75088531 MsG0780040263.01.T01:CDS 30.0%
TAGACAGAGAAATGAAATCA+AGG - Chr7:75089545-75089564 None:intergenic 30.0%
TCATTTCTCTGTCTATTCTT+AGG + Chr7:75089550-75089569 MsG0780040263.01.T01:intron 30.0%
TCCAATAGAAGTAAAAGATC+AGG + Chr7:75089408-75089427 MsG0780040263.01.T01:intron 30.0%
TGTTATGCTTGCAAAATTTG+AGG + Chr7:75089449-75089468 MsG0780040263.01.T01:intron 30.0%
TTTATCTTGATCCGTATTAC+CGG - Chr7:75089794-75089813 None:intergenic 30.0%
! AGGACACAAGTATAACTTTT+TGG - Chr7:75089477-75089496 None:intergenic 30.0%
! ATGACTCTAAGAAAATGAAG+AGG - Chr7:75089220-75089239 None:intergenic 30.0%
! ATGGTATTATGCTATTTGGT+TGG + Chr7:75088516-75088535 MsG0780040263.01.T01:CDS 30.0%
! CGCCTTTGTTTACATTATAT+TGG - Chr7:75088991-75089010 None:intergenic 30.0%
! TAAACCCTCTGAAAGTAAAA+AGG - Chr7:75088259-75088278 None:intergenic 30.0%
! TCCTGATCTTTTACTTCTAT+TGG - Chr7:75089412-75089431 None:intergenic 30.0%
! TTGGAATAATGTTGCTTCAA+TGG + Chr7:75090359-75090378 MsG0780040263.01.T01:CDS 30.0%
!! ATTTTAATGAGCTTGAGGTA+AGG + Chr7:75088855-75088874 MsG0780040263.01.T01:intron 30.0%
!! CAAAATCTTCTGAAGTTTGA+AGG + Chr7:75088789-75088808 MsG0780040263.01.T01:intron 30.0%
!! GATTCATTTTAATGAGCTTG+AGG + Chr7:75088850-75088869 MsG0780040263.01.T01:intron 30.0%
!! GTTCTAATTGTTTTTCGAAC+CGG - Chr7:75090633-75090652 None:intergenic 30.0%
!! TTTAAGGTAGCATTGATTTG+TGG + Chr7:75090901-75090920 MsG0780040263.01.T01:three_prime_UTR 30.0%
!!! GTTTTAATTGTGATGGAAGA+TGG + Chr7:75089094-75089113 MsG0780040263.01.T01:intron 30.0%
AAACATTGCAAGAGAAACGA+AGG - Chr7:75090880-75090899 None:intergenic 35.0%
ACAAGAGTCTATACCAGAAA+AGG + Chr7:75089726-75089745 MsG0780040263.01.T01:CDS 35.0%
ATCTCTATTGTGCTTTCCTA+GGG - Chr7:75090571-75090590 None:intergenic 35.0%
CAGAACACAATGCATCAAAT+TGG + Chr7:75090289-75090308 MsG0780040263.01.T01:CDS 35.0%
CCTAATGAAGAAGGAAAAGA+CGG + Chr7:75090711-75090730 MsG0780040263.01.T01:CDS 35.0%
GAAGAAAGACATAAGCTGAA+AGG - Chr7:75088631-75088650 None:intergenic 35.0%
TAAAACAGACAAGTGTGTTC+CGG + Chr7:75090611-75090630 MsG0780040263.01.T01:CDS 35.0%
TACTTCATTTCCTTGATTGC+CGG - Chr7:75090268-75090287 None:intergenic 35.0%
TAGTAATCCAGAGTTTAGCT+GGG - Chr7:75088950-75088969 None:intergenic 35.0%
TATCTCTATTGTGCTTTCCT+AGG - Chr7:75090572-75090591 None:intergenic 35.0%
TGTAAACAAAGGCGGTATTT+AGG + Chr7:75088997-75089016 MsG0780040263.01.T01:intron 35.0%
TGTTGCATATGAAAATGGGT+TGG + Chr7:75088681-75088700 MsG0780040263.01.T01:intron 35.0%
TTATTCCAACCTGGATTCAT+TGG - Chr7:75090348-75090367 None:intergenic 35.0%
TTGATGTGAACCAAAGGATT+TGG + Chr7:75089187-75089206 MsG0780040263.01.T01:intron 35.0%
! AAGATCAGGACTAGTGAAAT+AGG + Chr7:75089422-75089441 MsG0780040263.01.T01:intron 35.0%
! AGAAGAATTGTCTTGTTGCT+CGG - Chr7:75089689-75089708 None:intergenic 35.0%
! ATATTTTGTGGCTGAATTCC+TGG - Chr7:75090444-75090463 None:intergenic 35.0%
! GGAACCTTTTTACTTTCAGA+GGG + Chr7:75088252-75088271 MsG0780040263.01.T01:five_prime_UTR 35.0%
! TATAATTTGCCGGTATTGAG+AGG - Chr7:75090010-75090029 None:intergenic 35.0%
! TATGGGGTTGTTGAGATTTT+TGG + Chr7:75088739-75088758 MsG0780040263.01.T01:intron 35.0%
! TCGTGGTTACTATAATTTGC+CGG - Chr7:75090020-75090039 None:intergenic 35.0%
!! ATTCCATTGATTCGCAAAGA+GGG - Chr7:75090140-75090159 None:intergenic 35.0%
!!! AATGGGTTGGACGTAAATTT+TGG + Chr7:75088694-75088713 MsG0780040263.01.T01:intron 35.0%
!!! TTTACTATTGGCTCCTTTTC+TGG - Chr7:75089742-75089761 None:intergenic 35.0%
AACTTGTAGCAGCATCACAT+TGG + Chr7:75090472-75090491 MsG0780040263.01.T01:CDS 40.0%
ACAAATTGTTCCGTAGAACC+CGG + Chr7:75088878-75088897 MsG0780040263.01.T01:intron 40.0%
ACCAAGAAGCCTAATGAAGA+AGG + Chr7:75090702-75090721 MsG0780040263.01.T01:CDS 40.0%
ACGATGAGAAATGTTCCGAT+AGG + Chr7:75089955-75089974 MsG0780040263.01.T01:CDS 40.0%
AGGATCAAGACCAAATCCTT+TGG - Chr7:75089200-75089219 None:intergenic 40.0%
ATTCCTGGAATTGCCAACAT+AGG - Chr7:75090429-75090448 None:intergenic 40.0%
ATTTCTGCAAGAACTGCCAA+AGG + Chr7:75089914-75089933 MsG0780040263.01.T01:CDS 40.0%
CAATACAGTCTCGTTATCCA+TGG - Chr7:75090100-75090119 None:intergenic 40.0%
CAGTACAAGGAAAACAGAAG+TGG + Chr7:75089642-75089661 MsG0780040263.01.T01:CDS 40.0%
CTAGTAATCCAGAGTTTAGC+TGG - Chr7:75088951-75088970 None:intergenic 40.0%
CTGGATTACTAGAGAGTAGA+GGG + Chr7:75088959-75088978 MsG0780040263.01.T01:intron 40.0%
CTTGGATTGATGTGAACCAA+AGG + Chr7:75089181-75089200 MsG0780040263.01.T01:intron 40.0%
GAAGCAACATTATTCCAACC+TGG - Chr7:75090357-75090376 None:intergenic 40.0%
GATGCTGCTACAAGTTGTAA+AGG - Chr7:75090468-75090487 None:intergenic 40.0%
GCTATTTGGTTGGAAGATTC+CGG + Chr7:75088526-75088545 MsG0780040263.01.T01:CDS 40.0%
GGATCTTCTGTAACAAACAC+CGG + Chr7:75090246-75090265 MsG0780040263.01.T01:CDS 40.0%
GTGGGCTTGGAATTTACTAT+TGG - Chr7:75089754-75089773 None:intergenic 40.0%
TACTACCAATGAATCCAGGT+TGG + Chr7:75090340-75090359 MsG0780040263.01.T01:CDS 40.0%
TCCTTCTTCATTAGGCTTCT+TGG - Chr7:75090706-75090725 None:intergenic 40.0%
TCTGGATTACTAGAGAGTAG+AGG + Chr7:75088958-75088977 MsG0780040263.01.T01:intron 40.0%
TGTTACAGAAGATCCACACA+AGG - Chr7:75090241-75090260 None:intergenic 40.0%
TTATAGTCCGGATTCAAACC+CGG - Chr7:75088900-75088919 None:intergenic 40.0%
TTCTCATGCTCATACAATCC+AGG + Chr7:75090779-75090798 MsG0780040263.01.T01:CDS 40.0%
! AGAAGGAAAAGACGGTGTTT+TGG + Chr7:75090719-75090738 MsG0780040263.01.T01:CDS 40.0%
! AGTGTTATCCTGTTTCTCCA+TGG + Chr7:75090316-75090335 MsG0780040263.01.T01:CDS 40.0%
! CAACTGTTACTTGTAGAGGA+AGG - Chr7:75090525-75090544 None:intergenic 40.0%
! CCGTCTTTTCCTTCTTCATT+AGG - Chr7:75090714-75090733 None:intergenic 40.0%
! GAAGGAAAAGACGGTGTTTT+GGG + Chr7:75090720-75090739 MsG0780040263.01.T01:CDS 40.0%
! GGGAACCTTTTTACTTTCAG+AGG + Chr7:75088251-75088270 MsG0780040263.01.T01:five_prime_UTR 40.0%
! GTGTTATCCTGTTTCTCCAT+GGG + Chr7:75090317-75090336 MsG0780040263.01.T01:CDS 40.0%
! TCTGAGATAAGCAGAAGTTG+AGG + Chr7:75089373-75089392 MsG0780040263.01.T01:intron 40.0%
!! GATTCCATTGATTCGCAAAG+AGG - Chr7:75090141-75090160 None:intergenic 40.0%
!! TTCCATTGATTCGCAAAGAG+GGG - Chr7:75090139-75090158 None:intergenic 40.0%
!!! GGGTTGTTGAGATTTTTGGT+TGG + Chr7:75088743-75088762 MsG0780040263.01.T01:intron 40.0%
!!! TTGCATCGGCACTTCTTTTT+TGG - Chr7:75090182-75090201 None:intergenic 40.0%
AACAGTTGCTGCTCAGGAAA+TGG + Chr7:75090537-75090556 MsG0780040263.01.T01:CDS 45.0%
ACAAGTAACAGTTGCTGCTC+AGG + Chr7:75090531-75090550 MsG0780040263.01.T01:CDS 45.0%
ACACCTATGTTGGCAATTCC+AGG + Chr7:75090423-75090442 MsG0780040263.01.T01:CDS 45.0%
ACAGAAGATCCACACAAGGA+CGG - Chr7:75090237-75090256 None:intergenic 45.0%
AGAAATGTTCCGATAGGTGC+TGG + Chr7:75089961-75089980 MsG0780040263.01.T01:CDS 45.0%
AGGATACTTGCAGCAGTACA+AGG + Chr7:75089629-75089648 MsG0780040263.01.T01:intron 45.0%
AGTCTCGAAAAGTCCTATCC+GGG + Chr7:75090668-75090687 MsG0780040263.01.T01:CDS 45.0%
ATGAGAAATAGCTCCTGAGC+TGG - Chr7:75090766-75090785 None:intergenic 45.0%
ATGGTGTCCAACACCTATGT+TGG + Chr7:75090413-75090432 MsG0780040263.01.T01:CDS 45.0%
ATGTACCATGGGTCCAGAAT+TGG - Chr7:75088573-75088592 None:intergenic 45.0%
CAAATTGTTCCGTAGAACCC+GGG + Chr7:75088879-75088898 MsG0780040263.01.T01:intron 45.0%
CAGTCTCGAAAAGTCCTATC+CGG + Chr7:75090667-75090686 MsG0780040263.01.T01:CDS 45.0%
CAGTTCTGTGCAACATAGAG+AGG + Chr7:75090209-75090228 MsG0780040263.01.T01:CDS 45.0%
CAGTTCTTGCAGAAATGTCG+AGG - Chr7:75089910-75089929 None:intergenic 45.0%
CTATTGTGCTTTCCTAGGGT+TGG - Chr7:75090567-75090586 None:intergenic 45.0%
CTTACTTCCCAGCTAAACTC+TGG + Chr7:75088940-75088959 MsG0780040263.01.T01:intron 45.0%
GAAATGTTCCGATAGGTGCT+GGG + Chr7:75089962-75089981 MsG0780040263.01.T01:CDS 45.0%
GAACATGTCTCAGACTCAGA+AGG + Chr7:75088490-75088509 MsG0780040263.01.T01:CDS 45.0%
GGAATTGCCAACATAGGTGT+TGG - Chr7:75090423-75090442 None:intergenic 45.0%
GGACACTGAACAATCTTGTC+TGG - Chr7:75089829-75089848 None:intergenic 45.0%
GTAACAAACACCGGCAATCA+AGG + Chr7:75090255-75090274 MsG0780040263.01.T01:CDS 45.0%
TAACACGGAGACCGGTAATA+CGG + Chr7:75089780-75089799 MsG0780040263.01.T01:CDS 45.0%
TACCCCTCTTTGCGAATCAA+TGG + Chr7:75090134-75090153 MsG0780040263.01.T01:CDS 45.0%
TATAGTCCGGATTCAAACCC+GGG - Chr7:75088899-75088918 None:intergenic 45.0%
TCTCAGACTCAGAAGGATCA+TGG + Chr7:75088497-75088516 MsG0780040263.01.T01:CDS 45.0%
TCTCGTTATCCATGGATGTG+TGG - Chr7:75090092-75090111 None:intergenic 45.0%
TGGGTACTACCAATGAATCC+AGG + Chr7:75090336-75090355 MsG0780040263.01.T01:CDS 45.0%
! CTGTTACTTGTAGAGGAAGG+CGG - Chr7:75090522-75090541 None:intergenic 45.0%
! GCAGCAACTGTTACTTGTAG+AGG - Chr7:75090529-75090548 None:intergenic 45.0%
! GGATTCATTGGTAGTACCCA+TGG - Chr7:75090336-75090355 None:intergenic 45.0%
! TCTTGGTAGCTAATGTAGCC+CGG - Chr7:75090689-75090708 None:intergenic 45.0%
! TTTGGGTGGCTCTCAGATTT+TGG + Chr7:75090737-75090756 MsG0780040263.01.T01:CDS 45.0%
!! GTTTGTAGTTTCTAGCCTCG+TGG - Chr7:75090055-75090074 None:intergenic 45.0%
!!! TGCTCGGTTTTTTCTGCACA+AGG - Chr7:75089673-75089692 None:intergenic 45.0%
ACCGAAGATAACACGGAGAC+CGG + Chr7:75089772-75089791 MsG0780040263.01.T01:CDS 50.0%
ACCGGTCTCCGTGTTATCTT+CGG - Chr7:75089776-75089795 None:intergenic 50.0%
AGCACCTAGCCTCTCAATAC+CGG + Chr7:75089998-75090017 MsG0780040263.01.T01:CDS 50.0%
CAAGCCCACCGAAGATAACA+CGG + Chr7:75089765-75089784 MsG0780040263.01.T01:CDS 50.0%
CATTGCATGGATGCCGAAGT+CGG - Chr7:75090396-75090415 None:intergenic 50.0%
CGTTATCCATGGATGTGTGG+TGG - Chr7:75090089-75090108 None:intergenic 50.0%
GGATTCAAACCCGGGTTCTA+CGG - Chr7:75088891-75088910 None:intergenic 50.0%
GGTAGTACCCATGGAGAAAC+AGG - Chr7:75090327-75090346 None:intergenic 50.0%
GTAGAACCCGGGTTTGAATC+CGG + Chr7:75088890-75088909 MsG0780040263.01.T01:intron 50.0%
GTAGCAGCATCACATTGGAG+TGG + Chr7:75090477-75090496 MsG0780040263.01.T01:CDS 50.0%
GTAGCTAATGTAGCCCGGAT+AGG - Chr7:75090684-75090703 None:intergenic 50.0%
GTCTCCGTGTTATCTTCGGT+GGG - Chr7:75089772-75089791 None:intergenic 50.0%
TGTCCAATTCCGGCCAATTC+TGG + Chr7:75088557-75088576 MsG0780040263.01.T01:CDS 50.0%
TTGGCCGGAATTGGACATTC+CGG - Chr7:75088554-75088573 None:intergenic 50.0%
! CATGGATGTGTGGTGGTGAT+CGG - Chr7:75090082-75090101 None:intergenic 50.0%
! GCAAGAACTGCCAAAGGTAC+TGG + Chr7:75089920-75089939 MsG0780040263.01.T01:CDS 50.0%
! TTTGCCGGTATTGAGAGGCT+AGG - Chr7:75090005-75090024 None:intergenic 50.0%
!! AGGTGTTGGACACCATTGCA+TGG - Chr7:75090409-75090428 None:intergenic 50.0%
!! CAGATTTTGGAAGCCAGCTC+AGG + Chr7:75090750-75090769 MsG0780040263.01.T01:CDS 50.0%
!! GATTCGCAAAGAGGGGTATC+AGG - Chr7:75090132-75090151 None:intergenic 50.0%
!! GGAAAAGACGGTGTTTTGGG+TGG + Chr7:75090723-75090742 MsG0780040263.01.T01:CDS 50.0%
!! GTAGTTTCTAGCCTCGTGGT+TGG - Chr7:75090051-75090070 None:intergenic 50.0%
ACCATGGGTCCAGAATTGGC+CGG - Chr7:75088569-75088588 None:intergenic 55.0%
AGAGAGGAACCGTCCTTGTG+TGG + Chr7:75090225-75090244 MsG0780040263.01.T01:CDS 55.0%
AGTGTCCGCGATGCAACAGT+TGG + Chr7:75089842-75089861 MsG0780040263.01.T01:CDS 55.0%
CACCAGCAGTCCAGTACCTT+TGG - Chr7:75089933-75089952 None:intergenic 55.0%
CGAATGGAGTTCCAACCACG+AGG + Chr7:75090037-75090056 MsG0780040263.01.T01:CDS 55.0%
CGACTTCGGCATCCATGCAA+TGG + Chr7:75090394-75090413 MsG0780040263.01.T01:CDS 55.0%
CGATCACCACCACACATCCA+TGG + Chr7:75090080-75090099 MsG0780040263.01.T01:CDS 55.0%
CGTGGTTGGAACTCCATTCG+TGG - Chr7:75090037-75090056 None:intergenic 55.0%
GGAAATGGCTCACCAACCCT+AGG + Chr7:75090552-75090571 MsG0780040263.01.T01:CDS 55.0%
GGAATTGGACATTCCGGCAC+CGG - Chr7:75088548-75088567 None:intergenic 55.0%
GGCAGCAGTTCATCCGACTT+CGG + Chr7:75090380-75090399 MsG0780040263.01.T01:CDS 55.0%
GGTCCAGAATTGGCCGGAAT+TGG - Chr7:75088563-75088582 None:intergenic 55.0%
GGTCTCCGTGTTATCTTCGG+TGG - Chr7:75089773-75089792 None:intergenic 55.0%
GTGTCCCAACTGTTGCATCG+CGG - Chr7:75089850-75089869 None:intergenic 55.0%
GTGTCCGCGATGCAACAGTT+GGG + Chr7:75089843-75089862 MsG0780040263.01.T01:CDS 55.0%
TGGTTGGAAGATTCCGGTGC+CGG + Chr7:75088532-75088551 MsG0780040263.01.T01:CDS 55.0%
! CGTGTTATCTTCGGTGGGCT+TGG - Chr7:75089767-75089786 None:intergenic 55.0%
! GGTGCCGGAATGTCCAATTC+CGG + Chr7:75088547-75088566 MsG0780040263.01.T01:CDS 55.0%
!! ATGTTCCGATAGGTGCTGGG+AGG + Chr7:75089965-75089984 MsG0780040263.01.T01:CDS 55.0%
!! CAAAGGTACTGGACTGCTGG+TGG + Chr7:75089931-75089950 MsG0780040263.01.T01:CDS 55.0%
!! TGCCAAAGGTACTGGACTGC+TGG + Chr7:75089928-75089947 MsG0780040263.01.T01:CDS 55.0%
TCCGGCCAATTCTGGACCCA+TGG + Chr7:75088565-75088584 MsG0780040263.01.T01:CDS 60.0%
TTCCGCCTCCCAGCACCTAT+CGG - Chr7:75089973-75089992 None:intergenic 60.0%
TTGTAGAGGAAGGCGGCGAG+AGG - Chr7:75090515-75090534 None:intergenic 60.0%
!! TTCCGATAGGTGCTGGGAGG+CGG + Chr7:75089968-75089987 MsG0780040263.01.T01:CDS 60.0%
GGCGGCGAGAGGCAAAGTGA+TGG - Chr7:75090504-75090523 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 75088240 75090982 75088240 ID=MsG0780040263.01;Name=MsG0780040263.01
Chr7 mRNA 75088240 75090982 75088240 ID=MsG0780040263.01.T01;Parent=MsG0780040263.01;Name=MsG0780040263.01.T01;_AED=0.49;_eAED=0.49;_QI=248|1|1|1|1|1|2|170|426
Chr7 exon 75088240 75088586 75088240 ID=MsG0780040263.01.T01:exon:14194;Parent=MsG0780040263.01.T01
Chr7 exon 75089631 75090982 75089631 ID=MsG0780040263.01.T01:exon:14195;Parent=MsG0780040263.01.T01
Chr7 five_prime_UTR 75088240 75088487 75088240 ID=MsG0780040263.01.T01:five_prime_utr;Parent=MsG0780040263.01.T01
Chr7 CDS 75088488 75088586 75088488 ID=MsG0780040263.01.T01:cds;Parent=MsG0780040263.01.T01
Chr7 CDS 75089631 75090812 75089631 ID=MsG0780040263.01.T01:cds;Parent=MsG0780040263.01.T01
Chr7 three_prime_UTR 75090813 75090982 75090813 ID=MsG0780040263.01.T01:three_prime_utr;Parent=MsG0780040263.01.T01
Gene Sequence

>MsG0780040263.01.T01

ATGAACATGTCTCAGACTCAGAAGGATCATGGTATTATGCTATTTGGTTGGAAGATTCCGGTGCCGGAATGTCCAATTCCGGCCAATTCTGGACCCATGGATACTTGCAGCAGTACAAGGAAAACAGAAGTGGAAATACCTTGTGCAGAAAAAACCGAGCAACAAGACAATTCTTCTGATTCAATGGATAGTAAACAAGAGTCTATACCAGAAAAGGAGCCAATAGTAAATTCCAAGCCCACCGAAGATAACACGGAGACCGGTAATACGGATCAAGATAAACTCTTAAAGAAACCAGACAAGATTGTTCAGTGTCCGCGATGCAACAGTTGGGACACCAAGTTTTGTTATTTCAACAACTATAACGTCAATCAACCTCGACATTTCTGCAAGAACTGCCAAAGGTACTGGACTGCTGGTGGAACGATGAGAAATGTTCCGATAGGTGCTGGGAGGCGGAAGAATAAGCACCTAGCCTCTCAATACCGGCAAATTATAGTAACCACGAATGGAGTTCCAACCACGAGGCTAGAAACTACAAACTCATCCGATCACCACCACACATCCATGGATAACGAGACTGTATTGAAATTTGGTCCTGATACCCCTCTTTGCGAATCAATGGAATCAATGCTTCATCTTAGAGACCAAAAAAGAAGTGCCGATGCAAATTCAAACAGTTCTGTGCAACATAGAGAGGAACCGTCCTTGTGTGGATCTTCTGTAACAAACACCGGCAATCAAGGAAATGAAGTATCAGAACACAATGCATCAAATTGGTTGCAGTGTTATCCTGTTTCTCCATGGGTACTACCAATGAATCCAGGTTGGAATAATGTTGCTTCAATGGCAGCAGTTCATCCGACTTCGGCATCCATGCAATGGTGTCCAACACCTATGTTGGCAATTCCAGGAATTCAGCCACAAAATATACCTTTACAACTTGTAGCAGCATCACATTGGAGTGGACCATCACTTTGCCTCTCGCCGCCTTCCTCTACAAGTAACAGTTGCTGCTCAGGAAATGGCTCACCAACCCTAGGAAAGCACAATAGAGATACAGTTTTCGCAGATGAAGATAAAACAGACAAGTGTGTTCCGGTTCGAAAAACAATTAGAACTGATGTCACAGATGCAGTCTCGAAAAGTCCTATCCGGGCTACATTAGCTACCAAGAAGCCTAATGAAGAAGGAAAAGACGGTGTTTTGGGTGGCTCTCAGATTTTGGAAGCCAGCTCAGGAGCTATTTCTCATGCTCATACAATCCAGGAAAGCATATAA
Protein sequence

>MsG0780040263.01.T01

MNMSQTQKDHGIMLFGWKIPVPECPIPANSGPMDTCSSTRKTEVEIPCAEKTEQQDNSSDSMDSKQESIPEKEPIVNSKPTEDNTETGNTDQDKLLKKPDKIVQCPRCNSWDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPIGAGRRKNKHLASQYRQIIVTTNGVPTTRLETTNSSDHHHTSMDNETVLKFGPDTPLCESMESMLHLRDQKRSADANSNSSVQHREEPSLCGSSVTNTGNQGNEVSEHNASNWLQCYPVSPWVLPMNPGWNNVASMAAVHPTSASMQWCPTPMLAIPGIQPQNIPLQLVAASHWSGPSLCLSPPSSTSNSCCSGNGSPTLGKHNRDTVFADEDKTDKCVPVRKTIRTDVTDAVSKSPIRATLATKKPNEEGKDGVLGGSQILEASSGAISHAHTIQESI*