AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040639.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040639.01.T01 MTR_7g094880 97.727 220 5 0 68 287 14 233 1.34e-159 443
MsG0780040639.01.T01 MTR_7g094880 97.706 218 5 0 70 287 1 218 8.80e-159 441
MsG0780040639.01.T01 MTR_7g081130 48.780 164 81 2 90 252 1 162 6.11e-58 184
MsG0780040639.01.T01 MTR_8g007380 51.266 158 72 3 99 255 9 162 1.58e-54 176
MsG0780040639.01.T01 MTR_2g088860 43.781 201 97 3 97 281 23 223 2.56e-42 145
MsG0780040639.01.T01 MTR_4g028060 41.772 158 87 3 100 252 29 186 1.56e-31 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040639.01.T01 AT3G63120 52.036 221 94 6 75 286 4 221 8.25e-65 202
MsG0780040639.01.T01 AT3G63120 52.036 221 94 6 75 286 4 221 8.25e-65 202
MsG0780040639.01.T01 AT2G44740 44.103 195 100 3 90 279 1 191 7.53e-56 179
MsG0780040639.01.T01 AT3G05327 46.597 191 93 3 73 254 1 191 2.71e-55 178
MsG0780040639.01.T01 AT5G07450 46.452 155 82 1 99 252 20 174 2.14e-48 160
MsG0780040639.01.T01 AT3G21870 44.503 191 91 4 89 264 6 196 6.35e-47 156
MsG0780040639.01.T01 AT5G61650 44.848 165 84 3 91 252 12 172 2.81e-46 155
MsG0780040639.01.T01 AT2G45080 39.674 184 107 2 70 252 1 181 3.38e-41 142
MsG0780040639.01.T01 AT3G60550 37.634 186 107 4 72 252 6 187 5.06e-38 134

Find 78 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGTATCCGGGTATAATAAA+TGG 0.163374 7:+80459427 MsG0780040639.01.T01:CDS
TTTGACTACCCATTATTATA+TGG 0.223027 7:+80459453 MsG0780040639.01.T01:CDS
TTCACTGGGGCTTAAAGATT+TGG 0.261445 7:+80464032 MsG0780040639.01.T01:CDS
TCATCCCTTGCGGTTTGTTT+TGG 0.284493 7:+80465175 MsG0780040639.01.T01:three_prime_UTR
TGTCTGTGTCCATATAATAA+TGG 0.287621 7:-80459462 None:intergenic
GGGCTTAAAGATTTGGATAA+AGG 0.324795 7:+80464039 MsG0780040639.01.T01:CDS
GATGTTGTTACAGTATTTCA+TGG 0.324850 7:+80464156 MsG0780040639.01.T01:CDS
ATTTCTTTGCAGCTTGGATA+TGG 0.326959 7:+80463963 MsG0780040639.01.T01:intron
GGGAAACGCCGAGAAATCTT+TGG 0.335953 7:+80460482 MsG0780040639.01.T01:CDS
CAAATGATATATTGCTTTCA+AGG 0.359711 7:-80465232 None:intergenic
TCATAAATATTGTTGGCAAT+TGG 0.381390 7:+80464809 MsG0780040639.01.T01:CDS
ACACATTTCATAAATATTGT+TGG 0.395209 7:+80464802 MsG0780040639.01.T01:CDS
CTCAGATTTATACCTTTCAC+TGG 0.395474 7:+80464017 MsG0780040639.01.T01:CDS
GTCTGTGTCCATATAATAAT+GGG 0.398722 7:-80459461 None:intergenic
GTAACAACCACATGCACTAT+AGG 0.403608 7:-80465201 None:intergenic
CAGCTTGGATATGGTGACTT+TGG 0.407331 7:+80463972 MsG0780040639.01.T01:intron
TCTTGAAGAGAAAGCATCTA+AGG 0.410279 7:+80460398 MsG0780040639.01.T01:CDS
TTCACCACCCAAAGATTTCT+CGG 0.418456 7:-80460490 None:intergenic
GTGGGTAGCTAAACGGTATC+CGG 0.420161 7:+80459414 MsG0780040639.01.T01:CDS
GACATGTGAATTAAACAGAT+TGG 0.420515 7:+80464731 MsG0780040639.01.T01:CDS
CTTGTAGAATTAAAGAAAGT+TGG 0.426464 7:+80464877 MsG0780040639.01.T01:CDS
TATGCTAGCGGCGAAGTTCA+TGG 0.428220 7:+80464350 MsG0780040639.01.T01:CDS
GCATCTAAGGATGACTTTAG+AGG 0.446637 7:+80460411 MsG0780040639.01.T01:CDS
AAAGATTTGGATAAAGGTGT+TGG 0.457268 7:+80464045 MsG0780040639.01.T01:CDS
AGAAATCTTTGGGTGGTGAA+TGG 0.462292 7:+80460493 MsG0780040639.01.T01:CDS
TATGTGTGCCACAACAAAAC+AGG 0.462557 7:-80464250 None:intergenic
GGTATCCGGGTATAATAAAT+GGG 0.466601 7:+80459428 MsG0780040639.01.T01:CDS
GCTTACTATGCAAGAGTTGG+AGG 0.469306 7:+80464702 MsG0780040639.01.T01:CDS
GGAAACGCCGAGAAATCTTT+GGG 0.470348 7:+80460483 MsG0780040639.01.T01:CDS
TAAATATTGTTGGCAATTGG+AGG 0.475426 7:+80464812 MsG0780040639.01.T01:CDS
AATTGCAAGGTAACAACTGC+TGG 0.487345 7:+80460456 MsG0780040639.01.T01:CDS
TAAATCTGAGCTTGCATCAT+CGG 0.488124 7:-80464004 None:intergenic
ATTACAAACAAGGGCAAAGC+AGG 0.495204 7:-80465114 None:intergenic
GCAAGGTAACAACTGCTGGC+AGG 0.496049 7:+80460460 MsG0780040639.01.T01:CDS
CAAGGTAACAACTGCTGGCA+GGG 0.496914 7:+80460461 MsG0780040639.01.T01:CDS
TCAAATTGAAAGGCCAATGC+AGG 0.503145 7:+80464854 MsG0780040639.01.T01:CDS
GATCGTATCTTTAAGTACTC+AGG 0.504174 7:+80464216 MsG0780040639.01.T01:CDS
TTAATTCTACAAGCCTGCAT+TGG 0.523085 7:-80464867 None:intergenic
CTGAACTGATCTCTCAAGAA+GGG 0.524272 7:-80464097 None:intergenic
TCTTTGAATTCATTTAATTG+TGG 0.526056 7:-80464981 None:intergenic
TCTGAACTGATCTCTCAAGA+AGG 0.529138 7:-80464098 None:intergenic
CATGATTGCAATTACAAACA+AGG 0.529477 7:-80465124 None:intergenic
CACACAAGACTTTAATTGCA+AGG 0.529819 7:+80460443 MsG0780040639.01.T01:CDS
GTATGGAGTGGGTAGCTAAA+CGG 0.533045 7:+80459407 None:intergenic
TGTTGTGGCACACATATATG+TGG 0.538379 7:+80464257 MsG0780040639.01.T01:CDS
TAGAAACACTTCAAATTGAA+AGG 0.539163 7:+80464844 MsG0780040639.01.T01:CDS
AATGCTTACTATGCAAGAGT+TGG 0.539995 7:+80464699 MsG0780040639.01.T01:CDS
ATATTGTTGGCAATTGGAGG+AGG 0.543541 7:+80464815 MsG0780040639.01.T01:CDS
TGACCTCACTTAATGTGCAT+CGG 0.548730 7:+80464310 MsG0780040639.01.T01:CDS
AATCTTTAAGCCCCAGTGAA+AGG 0.550301 7:-80464029 None:intergenic
GGATAGACTACTTCAGCAAA+CGG 0.553574 7:+80464278 MsG0780040639.01.T01:CDS
CTTCGCCGCTAGCATAATGC+TGG 0.553964 7:-80464343 None:intergenic
TAAAGGTGTTGGAGTTCCGC+GGG 0.560704 7:+80464056 MsG0780040639.01.T01:CDS
TCAGATTTATACCTTTCACT+GGG 0.561119 7:+80464018 MsG0780040639.01.T01:CDS
ATAAAGGTGTTGGAGTTCCG+CGG 0.563652 7:+80464055 MsG0780040639.01.T01:CDS
TGGGTAGCTAAACGGTATCC+GGG 0.570907 7:+80459415 MsG0780040639.01.T01:CDS
ACACTACCATCTTGCAATTG+TGG 0.572742 7:-80464928 None:intergenic
TTGGTTTCCTATAGTGCATG+TGG 0.579634 7:+80465194 MsG0780040639.01.T01:three_prime_UTR
AAATACCCATTTATTATACC+CGG 0.580872 7:-80459433 None:intergenic
ATGATTGCAATTACAAACAA+GGG 0.583457 7:-80465123 None:intergenic
AAGGTAACAACTGCTGGCAG+GGG 0.589193 7:+80460462 MsG0780040639.01.T01:CDS
GATGAAACTTTCATCCCTTG+CGG 0.596220 7:+80465165 MsG0780040639.01.T01:three_prime_UTR
ATTCGTCACGGGTATGGAGT+GGG 0.598927 7:+80459396 None:intergenic
TGTTGGCAATTGGAGGAGGA+AGG 0.604021 7:+80464819 MsG0780040639.01.T01:CDS
AATTCGTCACGGGTATGGAG+TGG 0.606178 7:+80459395 None:intergenic
GTGCCACAACAAAACAGGAC+GGG 0.608490 7:-80464245 None:intergenic
GTGCTTCCACAATTGCAAGA+TGG 0.623442 7:+80464922 MsG0780040639.01.T01:CDS
GGAAACCAAAACAAACCGCA+AGG 0.630708 7:-80465180 None:intergenic
TACTTACGAAGACTCAAAGT+AGG 0.637029 7:-80464189 None:intergenic
TTATTATATGGACACAGACA+CGG 0.638115 7:+80459465 MsG0780040639.01.T01:CDS
GATAACCAGCATTATGCTAG+CGG 0.654270 7:+80464338 MsG0780040639.01.T01:CDS
TGTGCCACAACAAAACAGGA+CGG 0.669162 7:-80464246 None:intergenic
AACAGAAATGATACATTGCG+TGG 0.676271 7:-80464958 None:intergenic
AAGCCGATGCACATTAAGTG+AGG 0.679082 7:-80464313 None:intergenic
GAAACCAAAACAAACCGCAA+GGG 0.680921 7:-80465179 None:intergenic
AACGCCGAGAAATCTTTGGG+TGG 0.694410 7:+80460486 MsG0780040639.01.T01:CDS
GAGAGAAGTGACAAAACCCG+CGG 0.721682 7:-80464072 None:intergenic
CAGATTTATACCTTTCACTG+GGG 0.725959 7:+80464019 MsG0780040639.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAAATTTAAAATAAAAAT+AGG - Chr7:80459640-80459659 None:intergenic 0.0%
!! AATTTACTTAATTTATTATC+GGG - Chr7:80459524-80459543 None:intergenic 10.0%
!! ATTCATAATAAAATATTTAG+AGG + Chr7:80461838-80461857 MsG0780040639.01.T01:intron 10.0%
!! TATTTACTTCAAAAAAAAAA+AGG - Chr7:80461719-80461738 None:intergenic 10.0%
!! TCTAATATTTAAATATTTGT+GGG + Chr7:80464469-80464488 MsG0780040639.01.T01:intron 10.0%
!!! ACAATTTTTTAGTAATTTAA+TGG - Chr7:80460978-80460997 None:intergenic 10.0%
!!! CTATTTTATCTTTTTTTTTA+GGG - Chr7:80461294-80461313 None:intergenic 10.0%
!!! GTTTTGAATTTATTTATTTT+TGG - Chr7:80459836-80459855 None:intergenic 10.0%
!!! TCTATTTTATCTTTTTTTTT+AGG - Chr7:80461295-80461314 None:intergenic 10.0%
!!! TTATCAAATGATTTTTTTTT+TGG + Chr7:80463196-80463215 MsG0780040639.01.T01:intron 10.0%
!! AATTATAAATTTAATCGAAC+TGG + Chr7:80460918-80460937 MsG0780040639.01.T01:intron 15.0%
!! ATAAAAATAGGTTATTATTG+AGG - Chr7:80459628-80459647 None:intergenic 15.0%
!! ATACTTACCAATATTAATTA+TGG + Chr7:80462007-80462026 MsG0780040639.01.T01:intron 15.0%
!! ATTATAAATTTAATCGAACT+GGG + Chr7:80460919-80460938 MsG0780040639.01.T01:intron 15.0%
!! GTCTAATATTTAAATATTTG+TGG + Chr7:80464468-80464487 MsG0780040639.01.T01:intron 15.0%
!! GTGTAAATGAAATTAAAATA+AGG - Chr7:80462162-80462181 None:intergenic 15.0%
!! TACTTACCAATATTAATTAT+GGG + Chr7:80462008-80462027 MsG0780040639.01.T01:intron 15.0%
!! TTTAAACCCATAATTAATAT+TGG - Chr7:80462017-80462036 None:intergenic 15.0%
!!! AACATATTTTAATATTGCTA+AGG - Chr7:80464580-80464599 None:intergenic 15.0%
!!! AATTCAACCATATTTTTTTA+AGG + Chr7:80465034-80465053 MsG0780040639.01.T01:three_prime_UTR 15.0%
!!! ATAAGAATCATGTTATTTTA+AGG + Chr7:80462134-80462153 MsG0780040639.01.T01:intron 15.0%
!!! ATTTTGTATAAAATGAAATG+TGG - Chr7:80460353-80460372 None:intergenic 15.0%
!!! TGTTTAAAATTGAAGTTTTT+TGG + Chr7:80459786-80459805 MsG0780040639.01.T01:intron 15.0%
!!! TTATTTAATTTACTTACTCT+GGG - Chr7:80462247-80462266 None:intergenic 15.0%
!!! TTTATTTAATTTACTTACTC+TGG - Chr7:80462248-80462267 None:intergenic 15.0%
!! AAATAAATTCAAAACTCCAT+GGG + Chr7:80459841-80459860 MsG0780040639.01.T01:intron 20.0%
!! AAGTAAAAGATTAAAGTCTA+CGG + Chr7:80461034-80461053 MsG0780040639.01.T01:intron 20.0%
!! ACACATTTCATAAATATTGT+TGG + Chr7:80464802-80464821 MsG0780040639.01.T01:CDS 20.0%
!! AGTAAATGTGAAAATATAGA+TGG - Chr7:80461805-80461824 None:intergenic 20.0%
!! ATAATAACAATGAGCAAATT+TGG + Chr7:80462954-80462973 MsG0780040639.01.T01:intron 20.0%
!! ATTCACATCATAAAACATAT+TGG + Chr7:80459694-80459713 MsG0780040639.01.T01:intron 20.0%
!! ATTTGTGAATTATTCCTTAT+AGG + Chr7:80463585-80463604 MsG0780040639.01.T01:intron 20.0%
!! CTTATATGAAATATTAGTCA+GGG - Chr7:80462119-80462138 None:intergenic 20.0%
!! GTTAATAATATAAAAAGCCA+TGG - Chr7:80460780-80460799 None:intergenic 20.0%
!! TAAATAAATTCAAAACTCCA+TGG + Chr7:80459840-80459859 MsG0780040639.01.T01:intron 20.0%
!! TATTAATATCTCCAATTACA+GGG + Chr7:80460178-80460197 MsG0780040639.01.T01:intron 20.0%
!! TATTACACTAACTAGTAATT+AGG + Chr7:80462187-80462206 MsG0780040639.01.T01:intron 20.0%
!! TCATTATTAAAAGAAAGATG+AGG - Chr7:80461690-80461709 None:intergenic 20.0%
!! TCTTATATGAAATATTAGTC+AGG - Chr7:80462120-80462139 None:intergenic 20.0%
!! TCTTTGAATTCATTTAATTG+TGG - Chr7:80464984-80465003 None:intergenic 20.0%
!! TTATTAATATCTCCAATTAC+AGG + Chr7:80460177-80460196 MsG0780040639.01.T01:intron 20.0%
!! TTTCGTATTCCATTAAATTA+CGG + Chr7:80461425-80461444 MsG0780040639.01.T01:intron 20.0%
!!! AAAGTGTCCTTAAAAAAATA+TGG - Chr7:80465044-80465063 None:intergenic 20.0%
!!! AAGGATTTTATAACATAGTA+AGG + Chr7:80463368-80463387 MsG0780040639.01.T01:intron 20.0%
!!! AATAGAATTTTGACCATATA+TGG - Chr7:80464495-80464514 None:intergenic 20.0%
!!! ACAACCAAAATTTTAAATCA+CGG + Chr7:80464544-80464563 MsG0780040639.01.T01:intron 20.0%
!!! AGGATTTTATAACATAGTAA+GGG + Chr7:80463369-80463388 MsG0780040639.01.T01:intron 20.0%
!!! CATTTGATATTTTTCTGATT+AGG + Chr7:80465249-80465268 MsG0780040639.01.T01:three_prime_UTR 20.0%
!!! TATGATTTTGAAATTTTGAG+TGG + Chr7:80459751-80459770 MsG0780040639.01.T01:intron 20.0%
!!! TATGTAATCTTTTTGTTGTT+AGG + Chr7:80462977-80462996 MsG0780040639.01.T01:intron 20.0%
!!! TATTTAATTTACTTACTCTG+GGG - Chr7:80462246-80462265 None:intergenic 20.0%
! AAAAGACTTGAGAAGTAATT+TGG + Chr7:80463521-80463540 MsG0780040639.01.T01:intron 25.0%
! AAACATAGGATTTCTATTCA+AGG - Chr7:80463168-80463187 None:intergenic 25.0%
! AAATACCCATTTATTATACC+CGG - Chr7:80459436-80459455 None:intergenic 25.0%
! AAGAAACTCACAAATTATGA+AGG - Chr7:80462583-80462602 None:intergenic 25.0%
! ACTTAATTTATTATCGGGTA+TGG - Chr7:80459519-80459538 None:intergenic 25.0%
! ATGATTGCAATTACAAACAA+GGG - Chr7:80465126-80465145 None:intergenic 25.0%
! ATTATTGTCCCGTAATTTAA+TGG - Chr7:80461437-80461456 None:intergenic 25.0%
! ATTCAAGGTAACTTTATGTT+TGG - Chr7:80463153-80463172 None:intergenic 25.0%
! ATTGATCTGTACAATTAAGT+GGG - Chr7:80461762-80461781 None:intergenic 25.0%
! CAAATGATATATTGCTTTCA+AGG - Chr7:80465235-80465254 None:intergenic 25.0%
! CAACTTTAAGTGATAAGATA+TGG - Chr7:80459566-80459585 None:intergenic 25.0%
! CATATCTTATCACTTAAAGT+TGG + Chr7:80459564-80459583 MsG0780040639.01.T01:intron 25.0%
! CCAAAAAAAGAAAACAAAGA+TGG + Chr7:80462452-80462471 MsG0780040639.01.T01:intron 25.0%
! CTTAATTTATTATCGGGTAT+GGG - Chr7:80459518-80459537 None:intergenic 25.0%
! CTTGTAGAATTAAAGAAAGT+TGG + Chr7:80464877-80464896 MsG0780040639.01.T01:CDS 25.0%
! GTGAAAATATAGATGGATAT+TGG - Chr7:80461798-80461817 None:intergenic 25.0%
! TAACAATGACTAATCTTTGT+TGG + Chr7:80463264-80463283 MsG0780040639.01.T01:intron 25.0%
! TAGAAACACTTCAAATTGAA+AGG + Chr7:80464844-80464863 MsG0780040639.01.T01:CDS 25.0%
! TAGCATGCTTATGAAATTTA+GGG + Chr7:80461229-80461248 MsG0780040639.01.T01:intron 25.0%
! TAGGAGTAGTTAATTTATCT+TGG + Chr7:80462206-80462225 MsG0780040639.01.T01:intron 25.0%
! TCATAAATATTGTTGGCAAT+TGG + Chr7:80464809-80464828 MsG0780040639.01.T01:CDS 25.0%
! TCTAAGTAGCTTCTTAATTT+AGG - Chr7:80463124-80463143 None:intergenic 25.0%
! TTCAAGGTAACTTTATGTTT+GGG - Chr7:80463152-80463171 None:intergenic 25.0%
! TTCGTATTCCATTAAATTAC+GGG + Chr7:80461426-80461445 MsG0780040639.01.T01:intron 25.0%
! TTTGACTACCCATTATTATA+TGG + Chr7:80459453-80459472 MsG0780040639.01.T01:CDS 25.0%
!! CAACCAAAATTTTAAATCAC+GGG + Chr7:80464545-80464564 MsG0780040639.01.T01:intron 25.0%
!! CGGTAAAATTTTCTTCAATA+AGG - Chr7:80459592-80459611 None:intergenic 25.0%
!! GGTTATTATTGAGGATTTTT+AGG - Chr7:80459619-80459638 None:intergenic 25.0%
!! TACTGCAAAGATTTCATTTT+GGG - Chr7:80460106-80460125 None:intergenic 25.0%
!! TTGATGTTAGTTTATGGTTT+GGG + Chr7:80463050-80463069 MsG0780040639.01.T01:intron 25.0%
!! TTGCAAACACATATTTGTTA+CGG - Chr7:80460837-80460856 None:intergenic 25.0%
!! TTGTTGTTGATGTTAGTTTA+TGG + Chr7:80463044-80463063 MsG0780040639.01.T01:intron 25.0%
!!! AATGAAGTTATTTTGAAGCA+TGG + Chr7:80461497-80461516 MsG0780040639.01.T01:intron 25.0%
!!! AATTTTGAGTGGATTATGTA+TGG + Chr7:80459762-80459781 MsG0780040639.01.T01:intron 25.0%
!!! ACTATTTGTTTTCCTAATGA+TGG + Chr7:80464430-80464449 MsG0780040639.01.T01:intron 25.0%
!!! ATCTCTTCTTTTTTGTTTTC+TGG + Chr7:80462733-80462752 MsG0780040639.01.T01:intron 25.0%
!!! ATTATTGAGGATTTTTAGGT+GGG - Chr7:80459615-80459634 None:intergenic 25.0%
!!! CCATCTTTGTTTTCTTTTTT+TGG - Chr7:80462455-80462474 None:intergenic 25.0%
!!! GATTTTATTTGATTGAGATG+CGG - Chr7:80461463-80461482 None:intergenic 25.0%
!!! TATTATTGAGGATTTTTAGG+TGG - Chr7:80459616-80459635 None:intergenic 25.0%
!!! TCTCTTCTTTTTTGTTTTCT+GGG + Chr7:80462734-80462753 MsG0780040639.01.T01:intron 25.0%
AAATACAAACAAAAGCAACC+TGG - Chr7:80460033-80460052 None:intergenic 30.0%
AAATATTTGTGGGCCATATA+TGG + Chr7:80464479-80464498 MsG0780040639.01.T01:intron 30.0%
AATCAAGTGTTTGCTTAAAG+TGG - Chr7:80461395-80461414 None:intergenic 30.0%
ATAACATGACTATGTTAGAG+TGG - Chr7:80461899-80461918 None:intergenic 30.0%
ATAGAATCTTCATTCCTTCA+CGG + Chr7:80461353-80461372 MsG0780040639.01.T01:intron 30.0%
ATTGATTACACTATTCGAGA+AGG - Chr7:80461159-80461178 None:intergenic 30.0%
CATGATTGCAATTACAAACA+AGG - Chr7:80465127-80465146 None:intergenic 30.0%
CCAGTAAAATAAACGCAAAA+AGG - Chr7:80462711-80462730 None:intergenic 30.0%
GAATTATTCCTTATAGGTGT+TGG + Chr7:80463591-80463610 MsG0780040639.01.T01:intron 30.0%
GACATGTGAATTAAACAGAT+TGG + Chr7:80464731-80464750 MsG0780040639.01.T01:CDS 30.0%
GAGTAGTTAATTTATCTTGG+TGG + Chr7:80462209-80462228 MsG0780040639.01.T01:intron 30.0%
GATGTTGTTACAGTATTTCA+TGG + Chr7:80464156-80464175 MsG0780040639.01.T01:CDS 30.0%
GATTGATCTGTACAATTAAG+TGG - Chr7:80461763-80461782 None:intergenic 30.0%
GTAGCATGCTTATGAAATTT+AGG + Chr7:80461228-80461247 MsG0780040639.01.T01:intron 30.0%
GTCTGTGTCCATATAATAAT+GGG - Chr7:80459464-80459483 None:intergenic 30.0%
GTTAAACGACAATTGATACA+TGG - Chr7:80463248-80463267 None:intergenic 30.0%
TAAATATTGTTGGCAATTGG+AGG + Chr7:80464812-80464831 MsG0780040639.01.T01:CDS 30.0%
TCAGATTTATACCTTTCACT+GGG + Chr7:80464018-80464037 MsG0780040639.01.T01:CDS 30.0%
TCCTAATCAAATATCCAGAA+GGG + Chr7:80460375-80460394 MsG0780040639.01.T01:intron 30.0%
TGTCTGTGTCCATATAATAA+TGG - Chr7:80459465-80459484 None:intergenic 30.0%
TGTTAACATTGTTCTCTATC+TGG + Chr7:80464658-80464677 MsG0780040639.01.T01:intron 30.0%
TGTTCATTGCTAACAAAAGT+AGG - Chr7:80462297-80462316 None:intergenic 30.0%
TTATACATCGCATATAAAGC+TGG + Chr7:80461526-80461545 MsG0780040639.01.T01:intron 30.0%
TTATTATATGGACACAGACA+CGG + Chr7:80459465-80459484 MsG0780040639.01.T01:CDS 30.0%
TTCCTAATCAAATATCCAGA+AGG + Chr7:80460374-80460393 MsG0780040639.01.T01:intron 30.0%
TTGATCTGTACAATTAAGTG+GGG - Chr7:80461761-80461780 None:intergenic 30.0%
! AAAGATTTGGATAAAGGTGT+TGG + Chr7:80464045-80464064 MsG0780040639.01.T01:CDS 30.0%
! ACTGCAAAGATTTCATTTTG+GGG - Chr7:80460105-80460124 None:intergenic 30.0%
! ACTTTTGTTAGCAATGAACA+TGG + Chr7:80462297-80462316 MsG0780040639.01.T01:intron 30.0%
! ATGCACATTTTCAACACTAT+TGG - Chr7:80463925-80463944 None:intergenic 30.0%
! ATGTTGCATAACTTCTGTTT+TGG + Chr7:80460711-80460730 MsG0780040639.01.T01:intron 30.0%
! CTATAACTTGCGTTAATCTT+TGG + Chr7:80462855-80462874 MsG0780040639.01.T01:intron 30.0%
! GTACTGCAAAGATTTCATTT+TGG - Chr7:80460107-80460126 None:intergenic 30.0%
! GTTGATGTTAGTTTATGGTT+TGG + Chr7:80463049-80463068 MsG0780040639.01.T01:intron 30.0%
! GTTTTATGATGTGAATGAAG+TGG - Chr7:80459690-80459709 None:intergenic 30.0%
! TCTAAAGTAGTTGTGTTTGA+TGG - Chr7:80460687-80460706 None:intergenic 30.0%
! TGCACATTTTCAACACTATT+GGG - Chr7:80463924-80463943 None:intergenic 30.0%
! TGGTATAGATTTTAGACTTC+AGG + Chr7:80464770-80464789 MsG0780040639.01.T01:CDS 30.0%
! TTATCTTGGTGGATATTTGT+GGG + Chr7:80462220-80462239 MsG0780040639.01.T01:intron 30.0%
! TTGGAAATGAGCTTTTTGTT+TGG + Chr7:80464750-80464769 MsG0780040639.01.T01:CDS 30.0%
! TTTATCTTGGTGGATATTTG+TGG + Chr7:80462219-80462238 MsG0780040639.01.T01:intron 30.0%
!! CTTTCTAAAATCACTTGCAT+TGG + Chr7:80462621-80462640 MsG0780040639.01.T01:intron 30.0%
!! GTTACTTTGGAATTGAATGA+TGG + Chr7:80460635-80460654 MsG0780040639.01.T01:intron 30.0%
!! TAAAGAAAGCACGTTGATTT+AGG + Chr7:80462264-80462283 MsG0780040639.01.T01:intron 30.0%
!! TAGGGTTCTAAAACATTGTT+TGG + Chr7:80461247-80461266 MsG0780040639.01.T01:intron 30.0%
!! TCACCCGTGATTTAAAATTT+TGG - Chr7:80464551-80464570 None:intergenic 30.0%
!! TTTCCTAATGATGGATATCT+TGG + Chr7:80464439-80464458 MsG0780040639.01.T01:intron 30.0%
!!! AATCTTTGGTTTTTGACTTC+TGG + Chr7:80462869-80462888 MsG0780040639.01.T01:intron 30.0%
!!! ATCTTTGGTTTTTGACTTCT+GGG + Chr7:80462870-80462889 MsG0780040639.01.T01:intron 30.0%
!!! CATGTGTCACAATTTTTTAG+GGG + Chr7:80463414-80463433 MsG0780040639.01.T01:intron 30.0%
!!! CCTTTTTGCGTTTATTTTAC+TGG + Chr7:80462708-80462727 MsG0780040639.01.T01:intron 30.0%
!!! GCATGTGTCACAATTTTTTA+GGG + Chr7:80463413-80463432 MsG0780040639.01.T01:intron 30.0%
!!! TGCATGTGTCACAATTTTTT+AGG + Chr7:80463412-80463431 MsG0780040639.01.T01:intron 30.0%
!!! TGGTTTTTGATTTGTGGTTT+GGG - Chr7:80460078-80460097 None:intergenic 30.0%
!!! TTCTGTTTTGGTTTCGTTTA+TGG + Chr7:80460723-80460742 MsG0780040639.01.T01:intron 30.0%
!!! TTCTTTTTTGTTTTCTGGGT+GGG + Chr7:80462738-80462757 MsG0780040639.01.T01:intron 30.0%
!!! TTGGTTTTTGATTTGTGGTT+TGG - Chr7:80460079-80460098 None:intergenic 30.0%
!!! TTTAACCTGTTTTTACAGTG+AGG - Chr7:80462051-80462070 None:intergenic 30.0%
AACAAAAGCAACCTGGTAAT+AGG - Chr7:80460026-80460045 None:intergenic 35.0%
AACAGAAATGATACATTGCG+TGG - Chr7:80464961-80464980 None:intergenic 35.0%
AAGCTTGTCAATCAAGATTG+AGG + Chr7:80461181-80461200 MsG0780040639.01.T01:intron 35.0%
AATATTAGTCAGGGCTATAG+AGG - Chr7:80462110-80462129 None:intergenic 35.0%
AATCAGAGATCGAAGATCAA+AGG + Chr7:80463349-80463368 MsG0780040639.01.T01:intron 35.0%
AATGCTTACTATGCAAGAGT+TGG + Chr7:80464699-80464718 MsG0780040639.01.T01:CDS 35.0%
ACAAAAGCAACCTGGTAATA+GGG - Chr7:80460025-80460044 None:intergenic 35.0%
ACACCAAGATATCCATCATT+AGG - Chr7:80464445-80464464 None:intergenic 35.0%
ACCCTTCTGGATATTTGATT+AGG - Chr7:80460379-80460398 None:intergenic 35.0%
ACTATCTGTCCAATTGAAGT+TGG - Chr7:80461874-80461893 None:intergenic 35.0%
AGATTAAAGTCTACGGAATC+AGG + Chr7:80461041-80461060 MsG0780040639.01.T01:intron 35.0%
ATATTAGTCAGGGCTATAGA+GGG - Chr7:80462109-80462128 None:intergenic 35.0%
ATCATATTATCCGTACCCAT+GGG + Chr7:80459967-80459986 MsG0780040639.01.T01:intron 35.0%
ATCTTTGTTGGAGAACCTAT+AGG + Chr7:80463276-80463295 MsG0780040639.01.T01:intron 35.0%
ATTTCTTTGCAGCTTGGATA+TGG + Chr7:80463963-80463982 MsG0780040639.01.T01:intron 35.0%
CACACAAGACTTTAATTGCA+AGG + Chr7:80460443-80460462 MsG0780040639.01.T01:CDS 35.0%
CAGAAAAAGCTACAGAGAAA+TGG - Chr7:80465084-80465103 None:intergenic 35.0%
CAGATTTATACCTTTCACTG+GGG + Chr7:80464019-80464038 MsG0780040639.01.T01:CDS 35.0%
CGGGTATCATATTTATCCAA+CGG + Chr7:80459931-80459950 MsG0780040639.01.T01:intron 35.0%
CGTTTATGGTAGAACTATCT+AGG + Chr7:80460737-80460756 MsG0780040639.01.T01:intron 35.0%
CTACACACAAGAAAAAGTAG+TGG - Chr7:80461646-80461665 None:intergenic 35.0%
CTCAGATTTATACCTTTCAC+TGG + Chr7:80464017-80464036 MsG0780040639.01.T01:CDS 35.0%
GAAATGGAGAATTTCTTCCA+TGG + Chr7:80463470-80463489 MsG0780040639.01.T01:intron 35.0%
GATCGTATCTTTAAGTACTC+AGG + Chr7:80464216-80464235 MsG0780040639.01.T01:CDS 35.0%
GGGCTTAAAGATTTGGATAA+AGG + Chr7:80464039-80464058 MsG0780040639.01.T01:CDS 35.0%
GGGTATCATATTTATCCAAC+GGG + Chr7:80459932-80459951 MsG0780040639.01.T01:intron 35.0%
GGTATCATATTTATCCAACG+GGG + Chr7:80459933-80459952 MsG0780040639.01.T01:intron 35.0%
GGTATCCGGGTATAATAAAT+GGG + Chr7:80459428-80459447 MsG0780040639.01.T01:CDS 35.0%
GTAGATTTCTTAGCTAAAGC+TGG - Chr7:80461126-80461145 None:intergenic 35.0%
GTAGTGAGGAGATAGAAATT+TGG + Chr7:80463005-80463024 MsG0780040639.01.T01:intron 35.0%
TAAATCTGAGCTTGCATCAT+CGG - Chr7:80464007-80464026 None:intergenic 35.0%
TACTTACGAAGACTCAAAGT+AGG - Chr7:80464192-80464211 None:intergenic 35.0%
TATCATATTATCCGTACCCA+TGG + Chr7:80459966-80459985 MsG0780040639.01.T01:intron 35.0%
TCGTAGTTACCAACTTCAAT+TGG + Chr7:80461862-80461881 MsG0780040639.01.T01:intron 35.0%
TCTCTCGTTAAACTTCTACA+AGG - Chr7:80463617-80463636 None:intergenic 35.0%
TCTTTCTCTATATGTGCTTG+CGG + Chr7:80463743-80463762 MsG0780040639.01.T01:intron 35.0%
TGAACGGAGAAAACTCAATT+GGG - Chr7:80463325-80463344 None:intergenic 35.0%
TGATAAGTACGCACAAACAT+AGG - Chr7:80463182-80463201 None:intergenic 35.0%
TGATCTGTACAATTAAGTGG+GGG - Chr7:80461760-80461779 None:intergenic 35.0%
TGATGTGAATGAAGTGGAAA+CGG - Chr7:80459684-80459703 None:intergenic 35.0%
TTAATTCTACAAGCCTGCAT+TGG - Chr7:80464870-80464889 None:intergenic 35.0%
TTGTTAGCAATGAACATGGA+AGG + Chr7:80462301-80462320 MsG0780040639.01.T01:intron 35.0%
TTGTTCATTTCTTTGCAGCT+TGG + Chr7:80463957-80463976 MsG0780040639.01.T01:intron 35.0%
! AAGAATATTTTTCGCCGTGA+AGG - Chr7:80461370-80461389 None:intergenic 35.0%
! ATCTAGGATTTGGCATGTTA+TGG + Chr7:80460753-80460772 MsG0780040639.01.T01:intron 35.0%
! CACATTTTCAACACTATTGG+GGG - Chr7:80463922-80463941 None:intergenic 35.0%
! GAATTGAATGATGGAAACGT+TGG + Chr7:80460644-80460663 MsG0780040639.01.T01:intron 35.0%
! GCACATTTTCAACACTATTG+GGG - Chr7:80463923-80463942 None:intergenic 35.0%
! GTTTGGTTCAAGTTAGCAAA+GGG + Chr7:80460288-80460307 MsG0780040639.01.T01:intron 35.0%
! TGGTAGAACTATCTAGGATT+TGG + Chr7:80460743-80460762 MsG0780040639.01.T01:intron 35.0%
! TTTTATGCATTCCAGTCGTT+TGG + Chr7:80460271-80460290 MsG0780040639.01.T01:intron 35.0%
!! ATGAAGTATCGACTTAACCA+TGG - Chr7:80463490-80463509 None:intergenic 35.0%
!! CTAACTCATGAGAGTGTTTA+TGG + Chr7:80463557-80463576 MsG0780040639.01.T01:intron 35.0%
!! GAAATTGATCTCTGAGATCT+GGG + Chr7:80462909-80462928 MsG0780040639.01.T01:intron 35.0%
!! TACGTTGATTCAAGACATCA+AGG - Chr7:80461211-80461230 None:intergenic 35.0%
!! TCTTGAAGAGAAAGCATCTA+AGG + Chr7:80460398-80460417 MsG0780040639.01.T01:CDS 35.0%
!! TGAAATTGATCTCTGAGATC+TGG + Chr7:80462908-80462927 MsG0780040639.01.T01:intron 35.0%
!!! AGATTTCATTTTGGGGTGTT+TGG - Chr7:80460098-80460117 None:intergenic 35.0%
!!! CACTACTTTTTCTTGTGTGT+AGG + Chr7:80461644-80461663 MsG0780040639.01.T01:intron 35.0%
!!! CTTCTTTTTTGTTTTCTGGG+TGG + Chr7:80462737-80462756 MsG0780040639.01.T01:intron 35.0%
!!! GGTGTTTGGTTTTTGATTTG+TGG - Chr7:80460084-80460103 None:intergenic 35.0%
!!! GTTGTTTTGTTTCTACACAG+TGG - Chr7:80462427-80462446 None:intergenic 35.0%
!!! TCTTTGGTTTTTGACTTCTG+GGG + Chr7:80462871-80462890 MsG0780040639.01.T01:intron 35.0%
AATCTTTAAGCCCCAGTGAA+AGG - Chr7:80464032-80464051 None:intergenic 40.0%
AATTGCAAGGTAACAACTGC+TGG + Chr7:80460456-80460475 MsG0780040639.01.T01:CDS 40.0%
ACACACCTCACTGTAAAAAC+AGG + Chr7:80462043-80462062 MsG0780040639.01.T01:intron 40.0%
ACACTACCATCTTGCAATTG+TGG - Chr7:80464931-80464950 None:intergenic 40.0%
AGAAATCTTTGGGTGGTGAA+TGG + Chr7:80460493-80460512 MsG0780040639.01.T01:CDS 40.0%
AGTGAAGCTTAGAGCCAATT+TGG - Chr7:80463776-80463795 None:intergenic 40.0%
ATAGACTGCGACTTACAAGA+GGG + Chr7:80460529-80460548 MsG0780040639.01.T01:intron 40.0%
ATATTGTTGGCAATTGGAGG+AGG + Chr7:80464815-80464834 MsG0780040639.01.T01:CDS 40.0%
ATCATATTTATCCAACGGGG+CGG + Chr7:80459936-80459955 MsG0780040639.01.T01:intron 40.0%
ATTACAAACAAGGGCAAAGC+AGG - Chr7:80465117-80465136 None:intergenic 40.0%
ATTTGGCATGTTATGGACCA+TGG + Chr7:80460760-80460779 MsG0780040639.01.T01:intron 40.0%
CGATCTCTGATTCTTGTGAA+CGG - Chr7:80463341-80463360 None:intergenic 40.0%
CGGTATCCGGGTATAATAAA+TGG + Chr7:80459427-80459446 MsG0780040639.01.T01:CDS 40.0%
CTCGAAAGAACAATCTCTGA+TGG + Chr7:80461954-80461973 MsG0780040639.01.T01:intron 40.0%
CTGAACTGATCTCTCAAGAA+GGG - Chr7:80464100-80464119 None:intergenic 40.0%
CTTGCGGAGTTTATCCAAAT+TGG + Chr7:80463759-80463778 MsG0780040639.01.T01:intron 40.0%
GAAACCAAAACAAACCGCAA+GGG - Chr7:80465182-80465201 None:intergenic 40.0%
GATAACCAGCATTATGCTAG+CGG + Chr7:80464338-80464357 MsG0780040639.01.T01:CDS 40.0%
GATGAAACTTTCATCCCTTG+CGG + Chr7:80465165-80465184 MsG0780040639.01.T01:three_prime_UTR 40.0%
GATGAATGAAGCGCAAAAAG+CGG - Chr7:80462521-80462540 None:intergenic 40.0%
GCATCTAAGGATGACTTTAG+AGG + Chr7:80460411-80460430 MsG0780040639.01.T01:CDS 40.0%
GCTATAGAGGGACACTAAAA+TGG - Chr7:80462097-80462116 None:intergenic 40.0%
GGATAGACTACTTCAGCAAA+CGG + Chr7:80464278-80464297 MsG0780040639.01.T01:CDS 40.0%
GGATGTCAATGAATACCCAT+GGG - Chr7:80459985-80460004 None:intergenic 40.0%
GTAACAACCACATGCACTAT+AGG - Chr7:80465204-80465223 None:intergenic 40.0%
GTGAACGGAGAAAACTCAAT+TGG - Chr7:80463326-80463345 None:intergenic 40.0%
GTTGTTAGGAGTTTGTAGTG+AGG + Chr7:80462991-80463010 MsG0780040639.01.T01:intron 40.0%
TATGATCGTATCCATACCCA+CGG + Chr7:80459489-80459508 MsG0780040639.01.T01:intron 40.0%
TATGTGTGCCACAACAAAAC+AGG - Chr7:80464253-80464272 None:intergenic 40.0%
TCAAATTGAAAGGCCAATGC+AGG + Chr7:80464854-80464873 MsG0780040639.01.T01:CDS 40.0%
TCAATGAATACCCATGGGTA+CGG - Chr7:80459980-80459999 None:intergenic 40.0%
TCTGAACTGATCTCTCAAGA+AGG - Chr7:80464101-80464120 None:intergenic 40.0%
TGACCTCACTTAATGTGCAT+CGG + Chr7:80464310-80464329 MsG0780040639.01.T01:CDS 40.0%
TGTTGTGGCACACATATATG+TGG + Chr7:80464257-80464276 MsG0780040639.01.T01:CDS 40.0%
TTCACCACCCAAAGATTTCT+CGG - Chr7:80460493-80460512 None:intergenic 40.0%
TTCACTGGGGCTTAAAGATT+TGG + Chr7:80464032-80464051 MsG0780040639.01.T01:CDS 40.0%
TTGACATACATCTTGGTTGG+TGG - Chr7:80460581-80460600 None:intergenic 40.0%
TTGAGATCTAGGCACTTGTT+GGG + Chr7:80463082-80463101 MsG0780040639.01.T01:intron 40.0%
TTGCTGAAAACCCTATTACC+AGG + Chr7:80460012-80460031 MsG0780040639.01.T01:intron 40.0%
TTGGTTTCCTATAGTGCATG+TGG + Chr7:80465194-80465213 MsG0780040639.01.T01:three_prime_UTR 40.0%
TTGTTCTTTCGAGAACTCGA+CGG - Chr7:80461947-80461966 None:intergenic 40.0%
! CATAAAGCTTTTTGCTGCGT+TGG + Chr7:80460131-80460150 MsG0780040639.01.T01:intron 40.0%
! CGTTTGGTTCAAGTTAGCAA+AGG + Chr7:80460287-80460306 MsG0780040639.01.T01:intron 40.0%
! GAACATGGAAGGTATAGTAG+CGG + Chr7:80462312-80462331 MsG0780040639.01.T01:intron 40.0%
! GGATGTGTTGACATACATCT+TGG - Chr7:80460588-80460607 None:intergenic 40.0%
! GGTAATAGGGTTTTCAGCAA+AGG - Chr7:80460012-80460031 None:intergenic 40.0%
! GTGTTGACATACATCTTGGT+TGG - Chr7:80460584-80460603 None:intergenic 40.0%
!! TTTGCTGCGTTGGTTTAAAC+TGG + Chr7:80460141-80460160 MsG0780040639.01.T01:intron 40.0%
!!! AATTTTTTAGGGGAGAGGAG+AGG + Chr7:80463424-80463443 MsG0780040639.01.T01:intron 40.0%
!!! ATTGAGGATTTTTAGGTGGG+CGG - Chr7:80459612-80459631 None:intergenic 40.0%
!!! ATTTTTTAGGGGAGAGGAGA+GGG + Chr7:80463425-80463444 MsG0780040639.01.T01:intron 40.0%
!!! GTCACAATTTTTTAGGGGAG+AGG + Chr7:80463419-80463438 MsG0780040639.01.T01:intron 40.0%
!!! TTTTTGTTTTCTGGGTGGGA+TGG + Chr7:80462742-80462761 MsG0780040639.01.T01:intron 40.0%
AACCTATAGGACACTCAAGG+TGG + Chr7:80463289-80463308 MsG0780040639.01.T01:intron 45.0%
AAGCCGATGCACATTAAGTG+AGG - Chr7:80464316-80464335 None:intergenic 45.0%
AAGTAGTGGTCATGCCTTCA+TGG - Chr7:80461632-80461651 None:intergenic 45.0%
ACCTATAGGACACTCAAGGT+GGG + Chr7:80463290-80463309 MsG0780040639.01.T01:intron 45.0%
ACGAAAGGAGGTGGTTACTT+TGG + Chr7:80460622-80460641 MsG0780040639.01.T01:intron 45.0%
ACGGAGAAAACTCAATTGGG+AGG - Chr7:80463322-80463341 None:intergenic 45.0%
AGTAGTGGTCATGCCTTCAT+GGG - Chr7:80461631-80461650 None:intergenic 45.0%
ATGACGCGTAAGTGCAAGTT+TGG + Chr7:80464373-80464392 MsG0780040639.01.T01:intron 45.0%
ATGATCGTATCCATACCCAC+GGG + Chr7:80459490-80459509 MsG0780040639.01.T01:intron 45.0%
ATGCACTTCAGCCCTGTAAT+TGG - Chr7:80460192-80460211 None:intergenic 45.0%
ATGGATACCTCAATACCCAC+GGG + Chr7:80459869-80459888 MsG0780040639.01.T01:intron 45.0%
CACCTCCTTTCGTTGTTTAC+TGG - Chr7:80460615-80460634 None:intergenic 45.0%
CAGCTTGGATATGGTGACTT+TGG + Chr7:80463972-80463991 MsG0780040639.01.T01:intron 45.0%
CAGGTTCCGCATAATCTTGT+CGG + Chr7:80461060-80461079 MsG0780040639.01.T01:intron 45.0%
CAGTAAACAACGAAAGGAGG+TGG + Chr7:80460613-80460632 MsG0780040639.01.T01:intron 45.0%
CATAGACTGCGACTTACAAG+AGG + Chr7:80460528-80460547 MsG0780040639.01.T01:intron 45.0%
CATGGATACCTCAATACCCA+CGG + Chr7:80459868-80459887 MsG0780040639.01.T01:intron 45.0%
CGGAGAAAACTCAATTGGGA+GGG - Chr7:80463321-80463340 None:intergenic 45.0%
CTACAAGGCCAACACCTATA+AGG - Chr7:80463602-80463621 None:intergenic 45.0%
CTTGAGATCTAGGCACTTGT+TGG + Chr7:80463081-80463100 MsG0780040639.01.T01:intron 45.0%
CTTTCTCTTCAAGACCCTTC+TGG - Chr7:80460392-80460411 None:intergenic 45.0%
GAGAACCTATAGGACACTCA+AGG + Chr7:80463286-80463305 MsG0780040639.01.T01:intron 45.0%
GATGTATGTCAACACATCCG+CGG + Chr7:80460589-80460608 MsG0780040639.01.T01:intron 45.0%
GCTAACTTGAACCAAACGAC+TGG - Chr7:80460285-80460304 None:intergenic 45.0%
GCTTACTATGCAAGAGTTGG+AGG + Chr7:80464702-80464721 MsG0780040639.01.T01:CDS 45.0%
GGAAACCAAAACAAACCGCA+AGG - Chr7:80465183-80465202 None:intergenic 45.0%
GGAAACGCCGAGAAATCTTT+GGG + Chr7:80460483-80460502 MsG0780040639.01.T01:CDS 45.0%
GGACAAGAGACTTGAGATCT+AGG + Chr7:80463071-80463090 MsG0780040639.01.T01:intron 45.0%
GGAGAAAACTCAATTGGGAG+GGG - Chr7:80463320-80463339 None:intergenic 45.0%
GGGATGTCAATGAATACCCA+TGG - Chr7:80459986-80460005 None:intergenic 45.0%
GGTGACAGGTGATCTTGATT+TGG + Chr7:80460550-80460569 MsG0780040639.01.T01:intron 45.0%
GTGCTTCCACAATTGCAAGA+TGG + Chr7:80464922-80464941 MsG0780040639.01.T01:CDS 45.0%
TCATATTTATCCAACGGGGC+GGG + Chr7:80459937-80459956 MsG0780040639.01.T01:intron 45.0%
TCTAGCCACAAAACCCATGA+AGG + Chr7:80461615-80461634 MsG0780040639.01.T01:intron 45.0%
TGTGCCACAACAAAACAGGA+CGG - Chr7:80464249-80464268 None:intergenic 45.0%
TTCCGCATAATCTTGTCGGA+GGG + Chr7:80461064-80461083 MsG0780040639.01.T01:intron 45.0%
TTGTGAGTGAGGTGTGGAAA+TGG + Chr7:80463454-80463473 MsG0780040639.01.T01:intron 45.0%
! ACAATTAAGTGGGGGAGTAC+AGG - Chr7:80461752-80461771 None:intergenic 45.0%
! AGGGTTTTCAGCAAAGGCTA+GGG - Chr7:80460006-80460025 None:intergenic 45.0%
! CGGGGGGATTTTCTTTTTCT+CGG - Chr7:80460869-80460888 None:intergenic 45.0%
! GGCTGAAGTGCATGTTGATT+AGG + Chr7:80460199-80460218 MsG0780040639.01.T01:intron 45.0%
! TAGGGTTTTCAGCAAAGGCT+AGG - Chr7:80460007-80460026 None:intergenic 45.0%
! TCATGCCTTCATGGGTTTTG+TGG - Chr7:80461623-80461642 None:intergenic 45.0%
!! ATAAAGGTGTTGGAGTTCCG+CGG + Chr7:80464055-80464074 MsG0780040639.01.T01:CDS 45.0%
!! ATTGATCTCTGAGATCTGGG+TGG + Chr7:80462912-80462931 MsG0780040639.01.T01:intron 45.0%
!! GGTTTTGTGGCTAGAGTGAA+AGG - Chr7:80461610-80461629 None:intergenic 45.0%
!! GTGGGTATTGAGGTATCCAT+GGG - Chr7:80459869-80459888 None:intergenic 45.0%
!! TCATCCCTTGCGGTTTGTTT+TGG + Chr7:80465175-80465194 MsG0780040639.01.T01:three_prime_UTR 45.0%
!! TTGATCTCTGAGATCTGGGT+GGG + Chr7:80462913-80462932 MsG0780040639.01.T01:intron 45.0%
!!! TTGGTTTTTGACTTCTGGGG+TGG + Chr7:80462874-80462893 MsG0780040639.01.T01:intron 45.0%
!!! TTTTTGACTTCTGGGGTGGT+GGG + Chr7:80462878-80462897 MsG0780040639.01.T01:intron 45.0%
!! TAATTTACTTAATTTATTAT+CGG - Chr7:80459525-80459544 None:intergenic 5.0%
AACGCCGAGAAATCTTTGGG+TGG + Chr7:80460486-80460505 MsG0780040639.01.T01:CDS 50.0%
AAGGTAACAACTGCTGGCAG+GGG + Chr7:80460462-80460481 MsG0780040639.01.T01:CDS 50.0%
ACCCACCTTGAGTGTCCTAT+AGG - Chr7:80463294-80463313 None:intergenic 50.0%
AGTGAGTTGTGAGTGAGGTG+TGG + Chr7:80463448-80463467 MsG0780040639.01.T01:intron 50.0%
CAAAACTCCATGGGTACCCA+TGG + Chr7:80459850-80459869 MsG0780040639.01.T01:intron 50.0%
CAAGGTAACAACTGCTGGCA+GGG + Chr7:80460461-80460480 MsG0780040639.01.T01:CDS 50.0%
CATATTTATCCAACGGGGCG+GGG + Chr7:80459938-80459957 MsG0780040639.01.T01:intron 50.0%
CTTTCGTTGTTTACTGGCCG+CGG - Chr7:80460609-80460628 None:intergenic 50.0%
GAGAGAAGTGACAAAACCCG+CGG - Chr7:80464075-80464094 None:intergenic 50.0%
GGCCAGTAAACAACGAAAGG+AGG + Chr7:80460610-80460629 MsG0780040639.01.T01:intron 50.0%
GGGAAACGCCGAGAAATCTT+TGG + Chr7:80460482-80460501 MsG0780040639.01.T01:CDS 50.0%
GTGCCACAACAAAACAGGAC+GGG - Chr7:80464248-80464267 None:intergenic 50.0%
GTGGGTAGCTAAACGGTATC+CGG + Chr7:80459414-80459433 MsG0780040639.01.T01:CDS 50.0%
GTTCCGCATAATCTTGTCGG+AGG + Chr7:80461063-80461082 MsG0780040639.01.T01:intron 50.0%
TATGCTAGCGGCGAAGTTCA+TGG + Chr7:80464350-80464369 MsG0780040639.01.T01:CDS 50.0%
TCCCCTCCGACAAGATTATG+CGG - Chr7:80461069-80461088 None:intergenic 50.0%
TCCGCATAATCTTGTCGGAG+GGG + Chr7:80461065-80461084 MsG0780040639.01.T01:intron 50.0%
TGGGTAGCTAAACGGTATCC+GGG + Chr7:80459415-80459434 MsG0780040639.01.T01:CDS 50.0%
TGTTGGCAATTGGAGGAGGA+AGG + Chr7:80464819-80464838 MsG0780040639.01.T01:CDS 50.0%
TTTCTGGGTGGGATGGTTCA+GGG + Chr7:80462749-80462768 MsG0780040639.01.T01:intron 50.0%
! TTTTCTGGGTGGGATGGTTC+AGG + Chr7:80462748-80462767 MsG0780040639.01.T01:intron 50.0%
!! CGTGGGTATTGAGGTATCCA+TGG - Chr7:80459870-80459889 None:intergenic 50.0%
!! TAAAGGTGTTGGAGTTCCGC+GGG + Chr7:80464056-80464075 MsG0780040639.01.T01:CDS 50.0%
!! TGATCTCTGAGATCTGGGTG+GGG + Chr7:80462914-80462933 MsG0780040639.01.T01:intron 50.0%
!!! GTTTTTGACTTCTGGGGTGG+TGG + Chr7:80462877-80462896 MsG0780040639.01.T01:intron 50.0%
!!! TTTTGACTTCTGGGGTGGTG+GGG + Chr7:80462879-80462898 MsG0780040639.01.T01:intron 50.0%
AGTGGGTACCCACGAGCATA+CGG + Chr7:80459901-80459920 MsG0780040639.01.T01:intron 55.0%
CGCGGCCAGTAAACAACGAA+AGG + Chr7:80460607-80460626 MsG0780040639.01.T01:intron 55.0%
CTCGTGGGTACCCACTATAC+GGG - Chr7:80459897-80459916 None:intergenic 55.0%
CTTCGCCGCTAGCATAATGC+TGG - Chr7:80464346-80464365 None:intergenic 55.0%
GAGGGAGTGAGTTGTGAGTG+AGG + Chr7:80463443-80463462 MsG0780040639.01.T01:intron 55.0%
GCAAGGTAACAACTGCTGGC+AGG + Chr7:80460460-80460479 MsG0780040639.01.T01:CDS 55.0%
GCGACTTACAAGAGGGTGAC+AGG + Chr7:80460536-80460555 MsG0780040639.01.T01:intron 55.0%
GCTCGTGGGTACCCACTATA+CGG - Chr7:80459898-80459917 None:intergenic 55.0%
TATCGGGTATGGGTACCCGT+GGG - Chr7:80459508-80459527 None:intergenic 55.0%
TTATCGGGTATGGGTACCCG+TGG - Chr7:80459509-80459528 None:intergenic 55.0%
! GAGGTATCCATGGGTACCCA+TGG - Chr7:80459860-80459879 None:intergenic 55.0%
!! CAGCCCGTCCTGTTTTGTTG+TGG + Chr7:80464242-80464261 MsG0780040639.01.T01:CDS 55.0%
AAATCCCCCCGTGCGAAGCA+CGG + Chr7:80460878-80460897 MsG0780040639.01.T01:intron 60.0%
ACCCACGGGTACCCGTATAG+TGG + Chr7:80459883-80459902 MsG0780040639.01.T01:intron 60.0%
ACCCACTATACGGGTACCCG+TGG - Chr7:80459888-80459907 None:intergenic 60.0%
CCCACGGGTACCCGTATAGT+GGG + Chr7:80459884-80459903 MsG0780040639.01.T01:intron 60.0%
CCCACTATACGGGTACCCGT+GGG - Chr7:80459887-80459906 None:intergenic 60.0%
GGTATGGGTACCCGTGGGTA+TGG - Chr7:80459503-80459522 None:intergenic 60.0%
GTGGGTACCCACGAGCATAC+GGG + Chr7:80459902-80459921 MsG0780040639.01.T01:intron 60.0%
GTGTCAACCCGTGCTTCGCA+CGG - Chr7:80460889-80460908 None:intergenic 60.0%
TGTCAACCCGTGCTTCGCAC+GGG - Chr7:80460888-80460907 None:intergenic 60.0%
! ACGGGTACCCGTGGGTATTG+AGG - Chr7:80459879-80459898 None:intergenic 60.0%
AATCCCCCCGTGCGAAGCAC+GGG + Chr7:80460879-80460898 MsG0780040639.01.T01:intron 65.0%
GATACTTGTCCCCGCCCCGT+TGG - Chr7:80459950-80459969 None:intergenic 65.0%
GGTACCCACGAGCATACGGG+CGG + Chr7:80459905-80459924 MsG0780040639.01.T01:intron 65.0%
GTACCCACGAGCATACGGGC+GGG + Chr7:80459906-80459925 MsG0780040639.01.T01:intron 65.0%
GTCAACCCGTGCTTCGCACG+GGG - Chr7:80460887-80460906 None:intergenic 65.0%
TCAACCCGTGCTTCGCACGG+GGG - Chr7:80460886-80460905 None:intergenic 65.0%
!! TGACTTCTGGGGTGGTGGGG+TGG + Chr7:80462882-80462901 MsG0780040639.01.T01:intron 65.0%
ACGAGCATACGGGCGGGCAC+GGG + Chr7:80459912-80459931 MsG0780040639.01.T01:intron 70.0%
CAACCCGTGCTTCGCACGGG+GGG - Chr7:80460885-80460904 None:intergenic 70.0%
CACGAGCATACGGGCGGGCA+CGG + Chr7:80459911-80459930 MsG0780040639.01.T01:intron 70.0%
GTGCCCGCCCGTATGCTCGT+GGG - Chr7:80459912-80459931 None:intergenic 70.0%
CGTGCCCGCCCGTATGCTCG+TGG - Chr7:80459913-80459932 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 80459409 80465280 80459409 ID=MsG0780040639.01;Name=MsG0780040639.01
Chr7 mRNA 80459409 80465280 80459409 ID=MsG0780040639.01.T01;Parent=MsG0780040639.01;Name=MsG0780040639.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0.33|0.5|0.5|1|1|4|333|287
Chr7 exon 80459409 80459486 80459409 ID=MsG0780040639.01.T01:exon:18460;Parent=MsG0780040639.01.T01
Chr7 exon 80460393 80460514 80460393 ID=MsG0780040639.01.T01:exon:18461;Parent=MsG0780040639.01.T01
Chr7 exon 80463975 80464379 80463975 ID=MsG0780040639.01.T01:exon:18462;Parent=MsG0780040639.01.T01
Chr7 exon 80464689 80465280 80464689 ID=MsG0780040639.01.T01:exon:18463;Parent=MsG0780040639.01.T01
Chr7 CDS 80459409 80459486 80459409 ID=MsG0780040639.01.T01:cds;Parent=MsG0780040639.01.T01
Chr7 CDS 80460393 80460514 80460393 ID=MsG0780040639.01.T01:cds;Parent=MsG0780040639.01.T01
Chr7 CDS 80463975 80464379 80463975 ID=MsG0780040639.01.T01:cds;Parent=MsG0780040639.01.T01
Chr7 CDS 80464689 80464947 80464689 ID=MsG0780040639.01.T01:cds;Parent=MsG0780040639.01.T01
Chr7 three_prime_UTR 80464948 80465280 80464948 ID=MsG0780040639.01.T01:three_prime_utr;Parent=MsG0780040639.01.T01
Gene Sequence

>MsG0780040639.01.T01

ATGGAGTGGGTAGCTAAACGGTATCCGGGTATAATAAATGGGTATTTGACTACCCATTATTATATGGACACAGACACGAAGGGTCTTGAAGAGAAAGCATCTAAGGATGACTTTAGAGGATGTCGAGACACACAAGACTTTAATTGCAAGGTAACAACTGCTGGCAGGGGAAACGCCGAGAAATCTTTGGGTGGTGAATGCTTGGATATGGTGACTTTGGAGCTTGAAACCGATGATGCAAGCTCAGATTTATACCTTTCACTGGGGCTTAAAGATTTGGATAAAGGTGTTGGAGTTCCGCGGGTTTTGTCACTTCTCTCATCCCTTCTTGAGAGATCAGTTCAGAAAAATGAAATGCTAGTAGAGACAAAACATATAGAAGATGTTGTTACAGTATTTCATGGTTTAAGTGCACCTACTTTGAGTCTTCGTAAGTACATTGATCGTATCTTTAAGTACTCAGGTTGCAGCCCGTCCTGTTTTGTTGTGGCACACATATATGTGGATAGACTACTTCAGCAAACGGAGATCAAATTGACCTCACTTAATGTGCATCGGCTTCTGATAACCAGCATTATGCTAGCGGCGAAGTTCATGGATGACGCATTCTTCAACAATGCTTACTATGCAAGAGTTGGAGGAGTAAAGACATGTGAATTAAACAGATTGGAAATGAGCTTTTTGTTTGGTATAGATTTTAGACTTCAGGTTAGTGTAGACACATTTCATAAATATTGTTGGCAATTGGAGGAGGAAGGTCTAGAAACACTTCAAATTGAAAGGCCAATGCAGGCTTGTAGAATTAAAGAAAGTTGGTCAAACAAAGATGACTCTTCATGTGCTTCCACAATTGCAAGATGGTAG
Protein sequence

>MsG0780040639.01.T01

MEWVAKRYPGIINGYLTTHYYMDTDTKGLEEKASKDDFRGCRDTQDFNCKVTTAGRGNAEKSLGGECLDMVTLELETDDASSDLYLSLGLKDLDKGVGVPRVLSLLSSLLERSVQKNEMLVETKHIEDVVTVFHGLSAPTLSLRKYIDRIFKYSGCSPSCFVVAHIYVDRLLQQTEIKLTSLNVHRLLITSIMLAAKFMDDAFFNNAYYARVGGVKTCELNRLEMSFLFGIDFRLQVSVDTFHKYCWQLEEEGLETLQIERPMQACRIKESWSNKDDSSCASTIARW*