AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041243.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041243.01.T01 MTR_7g107280 88.101 395 13 1 293 653 26 420 0.0 712
MsG0780041243.01.T01 MTR_7g107270 74.359 156 37 1 1 153 1 156 1.93e-67 223
MsG0780041243.01.T01 MTR_7g107270 77.551 49 8 1 145 190 223 271 9.91e-16 78.6
MsG0780041243.01.T01 MTR_7g107270 74.359 156 37 1 1 153 1 156 1.10e-66 224
MsG0780041243.01.T01 MTR_7g107270 78.431 51 8 1 145 192 223 273 2.03e-16 82.0
MsG0780041243.01.T01 MTR_8g089370 36.212 359 184 6 297 617 35 386 3.24e-62 212
MsG0780041243.01.T01 MTR_7g018630 28.000 375 222 6 297 634 49 412 5.36e-41 155
MsG0780041243.01.T01 MTR_6g043850 31.765 340 182 6 296 598 27 353 2.06e-40 157
MsG0780041243.01.T01 MTR_4g053720 30.029 343 191 5 295 596 20 354 1.10e-39 149
MsG0780041243.01.T01 MTR_1g072550 27.568 370 217 7 286 613 18 378 3.32e-36 140
MsG0780041243.01.T01 MTR_1g032040 28.177 362 211 6 292 613 26 378 5.24e-34 134
MsG0780041243.01.T01 MTR_1g032380 28.177 362 211 6 292 613 26 378 5.24e-34 134
MsG0780041243.01.T01 MTR_7g088530 27.586 319 184 5 315 599 66 371 1.16e-33 134
MsG0780041243.01.T01 MTR_0153s0070 29.524 315 190 11 333 634 47 342 1.50e-26 112
MsG0780041243.01.T01 MTR_3g063230 28.212 358 199 10 282 589 32 381 3.36e-26 112
MsG0780041243.01.T01 MTR_3g105530 27.515 338 186 10 333 629 70 389 4.12e-25 108
MsG0780041243.01.T01 MTR_8g102038 33.333 186 110 3 374 552 52 230 1.02e-24 103
MsG0780041243.01.T01 MTR_7g117270 25.323 387 241 7 284 634 79 453 1.58e-24 108
MsG0780041243.01.T01 MTR_0153s0070 29.924 264 162 8 333 587 77 326 4.77e-24 104
MsG0780041243.01.T01 MTR_3g029990 27.671 365 198 10 327 650 53 392 4.83e-22 101
MsG0780041243.01.T01 MTR_6g033595 29.023 348 184 11 354 652 104 437 5.43e-22 100
MsG0780041243.01.T01 MTR_3g029990 27.671 365 198 10 327 650 53 392 5.78e-22 100
MsG0780041243.01.T01 MTR_3g030020 27.139 339 183 8 352 650 35 349 2.13e-21 97.1
MsG0780041243.01.T01 MTR_2g067960 28.772 285 155 6 354 596 69 347 4.16e-18 87.8
MsG0780041243.01.T01 MTR_3g074730 23.398 359 208 10 304 616 62 399 1.55e-16 82.8
MsG0780041243.01.T01 MTR_3g083350 27.206 272 174 7 298 556 55 315 1.04e-15 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041243.01.T01 AT3G58520 64.917 362 91 3 293 619 29 389 5.94e-162 471
MsG0780041243.01.T01 AT3G58520 59.780 363 96 5 293 619 29 377 1.09e-141 419
MsG0780041243.01.T01 AT5G48040 34.293 382 196 5 297 638 37 403 5.81e-62 212
MsG0780041243.01.T01 AT3G58490 80.180 111 22 0 52 162 63 173 4.31e-55 194
MsG0780041243.01.T01 AT3G58490 82.051 39 7 0 154 192 243 281 1.86e-13 73.2
MsG0780041243.01.T01 AT1G71850 30.874 366 189 7 286 598 7 361 1.20e-48 177
MsG0780041243.01.T01 AT2G39120 30.458 371 196 8 276 601 7 360 1.71e-42 158
MsG0780041243.01.T01 AT4G24320 31.176 340 191 7 295 596 21 355 1.19e-37 145
MsG0780041243.01.T01 AT5G45790 27.895 380 212 11 300 630 65 431 2.52e-35 139
MsG0780041243.01.T01 AT5G45790 28.732 355 196 9 320 630 5 346 6.65e-35 136
MsG0780041243.01.T01 AT3G58490 82.432 74 13 0 89 162 30 103 1.83e-33 132
MsG0780041243.01.T01 AT3G58490 82.051 39 7 0 154 192 173 211 1.16e-13 73.2
MsG0780041243.01.T01 AT3G63090 27.390 387 229 6 281 624 20 397 2.22e-32 130
MsG0780041243.01.T01 AT1G06440 27.824 363 207 9 286 599 17 373 1.43e-28 118
MsG0780041243.01.T01 AT5G21970 26.074 349 211 7 320 632 76 413 4.44e-27 115
MsG0780041243.01.T01 AT5G21970 26.074 349 211 7 320 632 76 413 4.44e-27 115
MsG0780041243.01.T01 AT2G31290 29.154 319 168 7 319 600 48 345 1.59e-24 107
MsG0780041243.01.T01 AT2G31290 29.154 319 168 7 319 600 48 345 1.59e-24 107
MsG0780041243.01.T01 AT4G01037 25.069 363 230 6 294 619 73 430 1.17e-22 102
MsG0780041243.01.T01 AT1G79120 27.855 359 188 13 291 592 47 391 1.55e-20 95.1
MsG0780041243.01.T01 AT1G79120 27.855 359 188 13 291 592 47 391 1.55e-20 95.1
MsG0780041243.01.T01 AT4G33495 29.078 282 146 9 354 589 104 377 3.64e-20 94.0
MsG0780041243.01.T01 AT4G08940 26.601 203 136 3 351 553 119 308 3.28e-15 78.6
MsG0780041243.01.T01 AT5G62990 24.789 355 204 10 274 581 39 377 1.80e-14 77.0

Find 153 sgRNAs with CRISPR-Local

Find 469 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAATGTTCTTCAGGTTTC+TGG 0.066140 7:-88701697 MsG0780041243.01.T01:intron
CTTAATACAGTTTGCTTATC+TGG 0.089322 7:-88703829 MsG0780041243.01.T01:CDS
TATCAGGATATTTAGGAATT+AGG 0.107101 7:+88697906 None:intergenic
CTTCGATTGTTGTTGGATTT+AGG 0.125241 7:+88698452 None:intergenic
TTCGATTGTTGTTGGATTTA+GGG 0.167873 7:+88698453 None:intergenic
TGGAATTTATCAGGATATTT+AGG 0.181176 7:+88697899 None:intergenic
TATCCTCTTAAATTTGATTT+AGG 0.193754 7:-88697953 MsG0780041243.01.T01:CDS
CAAGAAAATGCTTTGGAATA+TGG 0.194037 7:-88703871 MsG0780041243.01.T01:CDS
TTGGTTGCAGTTACAACTTT+TGG 0.243790 7:-88702776 MsG0780041243.01.T01:intron
ATCAGGATATTTAGGAATTA+GGG 0.244298 7:+88697907 None:intergenic
CGCGAGATTGTAATTGAAAT+TGG 0.255314 7:+88698367 None:intergenic
ATTCTTGGTGAATTCTCTTC+TGG 0.276589 7:-88704541 MsG0780041243.01.T01:CDS
ATAGCAAAAGTACGTTAAAA+TGG 0.277401 7:-88698342 MsG0780041243.01.T01:CDS
TTAACAAACTGGAATTTATC+AGG 0.292488 7:+88697890 None:intergenic
AATTGTGAGAATATCAAAAC+TGG 0.299954 7:+88698499 None:intergenic
TTGCCAATCGGAGAAGGTTT+TGG 0.309291 7:+88698213 None:intergenic
CCTGGATCTGGAGGAGAATT+GGG 0.309427 7:+88704432 None:intergenic
ACCTGGATCTGGAGGAGAAT+TGG 0.317722 7:+88704431 None:intergenic
TCTTCTTCTTCGATTGTTGT+TGG 0.319255 7:+88698445 None:intergenic
GGGATAAAAGCAGTGTAAAA+TGG 0.320919 7:+88704244 None:intergenic
TCAGCATAGGGTGAAATATA+AGG 0.343128 7:+88697647 None:intergenic
CTGGAGGAGAATTGGGGTTC+CGG 0.344682 7:+88704439 None:intergenic
ATGAGGTTTCCTAGAGGTTA+TGG 0.347103 7:-88697716 MsG0780041243.01.T01:CDS
TGAATGTTCTTCAGGTTTCT+GGG 0.347452 7:-88701696 MsG0780041243.01.T01:intron
AAACTTGGAGTTGGAAGTTC+AGG 0.348718 7:+88702714 None:intergenic
TGATCCTAAAAGTGATTTGA+TGG 0.361955 7:-88697612 MsG0780041243.01.T01:CDS
AGGTTATGGTGGGCAGAAAA+AGG 0.367516 7:-88697702 MsG0780041243.01.T01:CDS
ACTGACAGTGCTTGTATTCA+TGG 0.384822 7:-88701614 MsG0780041243.01.T01:CDS
TGATGGAGAAGCGCGTTGTT+GGG 0.386343 7:-88697595 MsG0780041243.01.T01:CDS
CATTACTGGCCTTAACAAAC+TGG 0.386349 7:+88697879 None:intergenic
AATTGCAGAAACACCATTAC+TGG 0.388042 7:+88697865 None:intergenic
CTGCGGATGAAACGGAGAAC+GGG 0.417001 7:+88698169 None:intergenic
AACGAGGGTGAGGGAATTCA+TGG 0.422965 7:+88698131 None:intergenic
AGCATCTTCCCCAAGTTTCA+AGG 0.423549 7:+88697297 None:intergenic
TGATAAATTCCAGTTTGTTA+AGG 0.424397 7:-88697888 MsG0780041243.01.T01:CDS
CTGTGGCGGGCAAGCGGATG+CGG 0.425996 7:+88697373 None:intergenic
ACTGGTGGAGATGCAGGTCT+TGG 0.428353 7:+88703922 None:intergenic
TTGATGGAGAAGCGCGTTGT+TGG 0.428751 7:-88697596 MsG0780041243.01.T01:CDS
CTGTGCCAAGGTGCGATTCT+TGG 0.429962 7:-88704556 MsG0780041243.01.T01:CDS
AGATGGAGATTCGGAGGAAG+AGG 0.433568 7:-88697236 MsG0780041243.01.T01:CDS
GAGTTTCACACTGCTTTCAA+TGG 0.438556 7:-88702690 MsG0780041243.01.T01:CDS
GAAGTTTCAGATTCGGATGA+TGG 0.439153 7:-88697184 MsG0780041243.01.T01:CDS
GCTTTCAATGGTGTTGCATT+GGG 0.446391 7:-88702678 MsG0780041243.01.T01:CDS
AGATGAGCAAGAAAATGCTT+TGG 0.451289 7:-88703878 MsG0780041243.01.T01:CDS
CTCCTCACTGGTGGAGATGC+AGG 0.451870 7:+88703916 None:intergenic
CCGTTCTCCGTTTCATCCGC+AGG 0.452682 7:-88698168 MsG0780041243.01.T01:CDS
TTCTGTGGAGAACGATGAAA+TGG 0.455363 7:-88697260 MsG0780041243.01.T01:CDS
TGAGGGTGAAGTTTCAGATT+CGG 0.455832 7:-88697191 MsG0780041243.01.T01:CDS
ACTGCGCTGTATCGGTTAAA+CGG 0.458072 7:+88698089 None:intergenic
TTAATACAGTTTGCTTATCT+GGG 0.458973 7:-88703828 MsG0780041243.01.T01:intron
CCCAATTCTCCTCCAGATCC+AGG 0.459052 7:-88704432 MsG0780041243.01.T01:intron
TGCTTTCAATGGTGTTGCAT+TGG 0.459262 7:-88702679 MsG0780041243.01.T01:CDS
GTTTCTGCAATTCGCCTTGT+GGG 0.464968 7:-88697854 MsG0780041243.01.T01:CDS
ATTCATGGGAAGAATGCTCT+TGG 0.465240 7:-88701599 MsG0780041243.01.T01:CDS
TAGCAAAAGTACGTTAAAAT+GGG 0.467330 7:-88698341 MsG0780041243.01.T01:CDS
CAGTTTGTTAAGGCCAGTAA+TGG 0.470962 7:-88697878 MsG0780041243.01.T01:CDS
CTGCAATTCGCCTTGTGGGT+TGG 0.471040 7:-88697850 MsG0780041243.01.T01:CDS
AAACCTAAATCAAATTTAAG+AGG 0.472331 7:+88697950 None:intergenic
TTCTTTGATGCTTGATTCTG+TGG 0.475361 7:-88697275 MsG0780041243.01.T01:CDS
TGAAATGGGAGATGGAGATT+CGG 0.480775 7:-88697245 MsG0780041243.01.T01:CDS
GGGTTGGTGTGATGAATTTG+CGG 0.487472 7:-88697834 MsG0780041243.01.T01:CDS
AGACTGAATCGGAACAGTCC+TGG 0.487635 7:+88697979 None:intergenic
TACTTATGATGATGAAATCC+AGG 0.489526 7:-88697997 MsG0780041243.01.T01:CDS
GGGCTTCTTTATCGTGGTGA+TGG 0.489648 7:-88697322 MsG0780041243.01.T01:CDS
TAGGATACCTGCGGATGAAA+CGG 0.492288 7:+88698161 None:intergenic
GTATTAAGTGTGTGAGAAGA+AGG 0.494461 7:+88703844 None:intergenic
AGAGAATTCCAACGAGGGTG+AGG 0.500325 7:+88698121 None:intergenic
GTCACTCACTATGTTCAATC+CGG 0.503422 7:-88704458 MsG0780041243.01.T01:CDS
GTAGAGTGGTCATGGTCAAT+TGG 0.504695 7:-88704135 MsG0780041243.01.T01:intron
GTAGCAGTTACTCTCCTCAC+TGG 0.505620 7:+88703904 None:intergenic
AGAGGATAAAGAGACTGAAT+CGG 0.506544 7:+88697968 None:intergenic
ATACATACCCAGAATAACAT+AGG 0.508465 7:+88704223 None:intergenic
TTATCTAGGGAACTGTATAA+AGG 0.513298 7:-88704078 MsG0780041243.01.T01:intron
GGAGTTGGAAGTTCAGGAGT+TGG 0.515222 7:+88702720 None:intergenic
GGGAATTCATGGAAGAGAGT+AGG 0.516043 7:+88698142 None:intergenic
CTCTTAGAGAAGGGTATGCA+AGG 0.516192 7:-88697411 MsG0780041243.01.T01:CDS
AATCTTAGAACTATCAGCAT+AGG 0.518933 7:+88697634 None:intergenic
ATCTAACAACTGCGCTGTAT+CGG 0.518941 7:+88698081 None:intergenic
GAAATAGTAAGCTGGCTGGC+TGG 0.519695 7:+88704721 None:intergenic
GTAAAACTTATCTCTGTGGC+GGG 0.524387 7:+88697360 None:intergenic
TGAAACTCAAAACTTGGAGT+TGG 0.527338 7:+88702705 None:intergenic
GGTGATGGATCCTTGAAACT+TGG 0.527766 7:-88697307 MsG0780041243.01.T01:CDS
GCAGTGTGAAACTCAAAACT+TGG 0.530399 7:+88702699 None:intergenic
GGCGGTGAGGAAAGAGGTGG+AGG 0.533934 7:+88698234 None:intergenic
TTGGATAAGCAAAGAGCAGT+AGG 0.537394 7:+88702739 None:intergenic
GAAGTTTGAGAGTGAGATTG+AGG 0.540461 7:+88704501 None:intergenic
TTCTGCCCACCATAACCTCT+AGG 0.542187 7:+88697707 None:intergenic
GCTTCTGTGTAGAGTGGTCA+TGG 0.542830 7:-88704143 MsG0780041243.01.T01:intron
CCGCCAAAACCTTCTCCGAT+TGG 0.542849 7:-88698216 MsG0780041243.01.T01:CDS
GATGGAGAAGCGCGTTGTTG+GGG 0.545147 7:-88697594 MsG0780041243.01.T01:CDS
GTTGAAGTGTAAAACAACTA+CGG 0.547330 7:-88697437 MsG0780041243.01.T01:CDS
TTGAAACAGAAATAGTAAGC+TGG 0.549207 7:+88704713 None:intergenic
TAGGCAGATGACGTTGTTGA+TGG 0.550670 7:-88704111 MsG0780041243.01.T01:CDS
TTCATGGGAAGAATGCTCTT+GGG 0.553751 7:-88701598 MsG0780041243.01.T01:CDS
ATGAATTCCCTCACCCTCGT+TGG 0.555573 7:-88698129 MsG0780041243.01.T01:CDS
AACGAAAGATAAAATATCCC+AGG 0.556431 7:+88697457 None:intergenic
GTGATGGATCCTTGAAACTT+GGG 0.557068 7:-88697306 MsG0780041243.01.T01:CDS
TAAGAGAGGGAAAACTGCGT+TGG 0.557183 7:-88697747 MsG0780041243.01.T01:CDS
ATCTTAGAACTATCAGCATA+GGG 0.558595 7:+88697635 None:intergenic
GTGGTCATGGTCAATTGGCT+AGG 0.568631 7:-88704130 MsG0780041243.01.T01:CDS
AGCGTCTTTGAGAAGTGAAG+CGG 0.569250 7:+88698267 None:intergenic
AAAATCTCTATACTGATCAC+TGG 0.573276 7:+88697769 None:intergenic
ACTACGGTTACTCTTAGAGA+AGG 0.573754 7:-88697421 MsG0780041243.01.T01:CDS
TGTTTCTGCAATTCGCCTTG+TGG 0.577886 7:-88697855 MsG0780041243.01.T01:CDS
TTATCTCTGTGGCGGGCAAG+CGG 0.580013 7:+88697367 None:intergenic
GAATGTTCTTCAGGTTTCTG+GGG 0.580420 7:-88701695 MsG0780041243.01.T01:intron
CTGGATCTGGAGGAGAATTG+GGG 0.585063 7:+88704433 None:intergenic
CTGACAGTGCTTGTATTCAT+GGG 0.586833 7:-88701613 MsG0780041243.01.T01:CDS
AATTTCACGATTAGAATCGT+AGG 0.590889 7:+88701571 None:intergenic
ATAACCTCTAGGAAACCTCA+TGG 0.593556 7:+88697718 None:intergenic
GAGAACGATGAAATGGGAGA+TGG 0.593841 7:-88697253 MsG0780041243.01.T01:CDS
GGTAAAACTTATCTCTGTGG+CGG 0.595849 7:+88697359 None:intergenic
GAGAATTCCAACGAGGGTGA+GGG 0.596171 7:+88698122 None:intergenic
CCTGCGGATGAAACGGAGAA+CGG 0.596308 7:+88698168 None:intergenic
AATGGGAGATGGAGATTCGG+AGG 0.596572 7:-88697242 MsG0780041243.01.T01:CDS
AACAGAAATAGTAAGCTGGC+TGG 0.600135 7:+88704717 None:intergenic
GCAGTTACTCTCCTCACTGG+TGG 0.601958 7:+88703907 None:intergenic
TACATACCCAGAATAACATA+GGG 0.604961 7:+88704224 None:intergenic
AGGACGGGGCTTCTTTATCG+TGG 0.607647 7:-88697328 MsG0780041243.01.T01:CDS
TTTGGCGGTGAGGAAAGAGG+TGG 0.608782 7:+88698231 None:intergenic
TTTACCATGTGATGAGGACG+GGG 0.609299 7:-88697342 MsG0780041243.01.T01:CDS
CACTGTTGAAAGATTATCGA+AGG 0.610221 7:-88698020 MsG0780041243.01.T01:CDS
AGGTTTCCTAGAGGTTATGG+TGG 0.611427 7:-88697713 MsG0780041243.01.T01:CDS
CAATTTCAATTACAATCTCG+CGG 0.619064 7:-88698366 MsG0780041243.01.T01:CDS
TCTTAGAGAAGGGTATGCAA+GGG 0.627452 7:-88697410 MsG0780041243.01.T01:CDS
GAAAATTCATCACTGTGCCA+AGG 0.630218 7:-88704568 MsG0780041243.01.T01:CDS
TGAACATAGTGAGTGACGAA+AGG 0.636744 7:+88704464 None:intergenic
GTATCGGTTAAACGGAAACA+AGG 0.638367 7:+88698097 None:intergenic
CTACGGTTACTCTTAGAGAA+GGG 0.642494 7:-88697420 MsG0780041243.01.T01:CDS
TCTGTGGAGAACGATGAAAT+GGG 0.642758 7:-88697259 MsG0780041243.01.T01:CDS
GATGAAACGGAGAACGGGGA+CGG 0.647305 7:+88698174 None:intergenic
CTTAGAGAAGGGTATGCAAG+GGG 0.649655 7:-88697409 MsG0780041243.01.T01:CDS
GAAGCCCCGTCCTCATCACA+TGG 0.651688 7:+88697338 None:intergenic
GGTTTCCTAGAGGTTATGGT+GGG 0.652229 7:-88697712 MsG0780041243.01.T01:CDS
TGAAATTGGAGATTCTGACA+TGG 0.654454 7:+88698381 None:intergenic
ATTCATCACACCAACCCACA+AGG 0.657593 7:+88697840 None:intergenic
ATTCACCAAGAATCGCACCT+TGG 0.658082 7:+88704551 None:intergenic
TAACCTCTAGGAAACCTCAT+GGG 0.659411 7:+88697719 None:intergenic
TTTCCCATGAGGTTTCCTAG+AGG 0.670960 7:-88697722 MsG0780041243.01.T01:CDS
TGCGGATGAAACGGAGAACG+GGG 0.673883 7:+88698170 None:intergenic
CAGTGCTGTGGTGAAACTGA+TGG 0.676045 7:+88701659 None:intergenic
CATGGTAAAACTTATCTCTG+TGG 0.682320 7:+88697356 None:intergenic
ATTGTGAGAATATCAAAACT+GGG 0.683059 7:+88698500 None:intergenic
TGATGGATCCTTGAAACTTG+GGG 0.683960 7:-88697305 MsG0780041243.01.T01:CDS
ACAAACGAGGAACAGTGCTG+TGG 0.694315 7:+88701647 None:intergenic
GGAAGAGAGTAGGATACCTG+CGG 0.696142 7:+88698152 None:intergenic
AAGGAAGAGAATTCCAACGA+GGG 0.699136 7:+88698116 None:intergenic
ACAAGCGATGAATTCTGTGA+GGG 0.713528 7:-88697208 MsG0780041243.01.T01:CDS
TTAGAGAAGGGTATGCAAGG+GGG 0.716012 7:-88697408 MsG0780041243.01.T01:CDS
GACCTGCATCTCCACCAGTG+AGG 0.716851 7:-88703918 MsG0780041243.01.T01:CDS
CAAGGAAGAGAATTCCAACG+AGG 0.727489 7:+88698115 None:intergenic
AACAAGCGATGAATTCTGTG+AGG 0.750668 7:-88697209 MsG0780041243.01.T01:CDS
AGTTCTGAAGAGAACAAACG+AGG 0.763056 7:+88701634 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAACTATAACT+AGG + Chr7:88702628-88702647 None:intergenic 10.0%
!! AAATTAAATAAGTATAAACA+TGG - Chr7:88698486-88698505 MsG0780041243.01.T01:CDS 10.0%
!! ACAAAAATTAAATAAAATAG+AGG + Chr7:88700599-88700618 None:intergenic 10.0%
!!! ATTTTTGTTTTTTGAATTTT+GGG - Chr7:88697575-88697594 MsG0780041243.01.T01:intron 10.0%
!!! TAAATATTATTTGTATGTTT+TGG + Chr7:88703210-88703229 None:intergenic 10.0%
!!! TGAATTTTATAATTCAAATT+GGG - Chr7:88702729-88702748 MsG0780041243.01.T01:CDS 10.0%
!!! TTGAATTTTATAATTCAAAT+TGG - Chr7:88702728-88702747 MsG0780041243.01.T01:CDS 10.0%
!!! TTTTAAGAGAATAAAATTAT+GGG + Chr7:88697521-88697540 None:intergenic 10.0%
!!! TTTTTAAGAGAATAAAATTA+TGG + Chr7:88697522-88697541 None:intergenic 10.0%
!!! TTTTTTTATGTTTTTTTTCA+AGG + Chr7:88701409-88701428 None:intergenic 10.0%
!! AATCAAGATTATATTACAAA+GGG + Chr7:88701747-88701766 None:intergenic 15.0%
!! GAAATGATATACTATAATTT+AGG + Chr7:88703337-88703356 None:intergenic 15.0%
!! TAATCAAGATTATATTACAA+AGG + Chr7:88701748-88701767 None:intergenic 15.0%
!! TTAAAAAACTGTGAATTTAT+TGG - Chr7:88697738-88697757 MsG0780041243.01.T01:CDS 15.0%
!! TTTAAGAGAATAAAATTATG+GGG + Chr7:88697520-88697539 None:intergenic 15.0%
!!! ACAATTCATTTATAGTTTTA+TGG + Chr7:88703155-88703174 None:intergenic 15.0%
!!! ATATTTCTTATCTATTTTCT+GGG - Chr7:88698443-88698462 MsG0780041243.01.T01:CDS 15.0%
!!! GATTTTTGTTTTTTGAATTT+TGG - Chr7:88697574-88697593 MsG0780041243.01.T01:intron 15.0%
!!! TTATTTAATTTTTGTACAGA+GGG - Chr7:88700604-88700623 MsG0780041243.01.T01:intron 15.0%
!!! TTTATTTAATTTTTGTACAG+AGG - Chr7:88700603-88700622 MsG0780041243.01.T01:intron 15.0%
!!! TTTTTTTTTTCTTCATGTTT+AGG - Chr7:88703050-88703069 MsG0780041243.01.T01:intron 15.0%
!! AAACATCGTTAAAAAAACAA+AGG - Chr7:88703268-88703287 MsG0780041243.01.T01:intron 20.0%
!! AAACCTAAATCAAATTTAAG+AGG + Chr7:88703963-88703982 None:intergenic 20.0%
!! AACATCGTTAAAAAAACAAA+GGG - Chr7:88703269-88703288 MsG0780041243.01.T01:intron 20.0%
!! AATCAATTTAAACTGATGAT+CGG + Chr7:88698545-88698564 None:intergenic 20.0%
!! ACTATTGTAGTTATTGTTTA+TGG - Chr7:88701704-88701723 MsG0780041243.01.T01:intron 20.0%
!! ATAAGATAAGTTAGAATACA+AGG + Chr7:88699109-88699128 None:intergenic 20.0%
!! ATATAATCTCGTAATTGTAT+AGG - Chr7:88699339-88699358 MsG0780041243.01.T01:intron 20.0%
!! ATTTAAACATAAACATAGGA+TGG + Chr7:88700828-88700847 None:intergenic 20.0%
!! GATAATAACAAGAACAAAAA+TGG - Chr7:88697320-88697339 MsG0780041243.01.T01:CDS 20.0%
!! GCAAATTTAAACATAAACAT+AGG + Chr7:88700832-88700851 None:intergenic 20.0%
!! TAATTGTCATTCGTTATTTA+AGG - Chr7:88702160-88702179 MsG0780041243.01.T01:intron 20.0%
!! TATAATCTCGTAATTGTATA+GGG - Chr7:88699340-88699359 MsG0780041243.01.T01:intron 20.0%
!! TATTTATATACCAACTTCAT+TGG + Chr7:88700945-88700964 None:intergenic 20.0%
!! TTAAGAGAATAAAATTATGG+GGG + Chr7:88697519-88697538 None:intergenic 20.0%
!!! AAGTATTGTTTGTTAATATG+TGG - Chr7:88701789-88701808 MsG0780041243.01.T01:intron 20.0%
!!! AATATTGTATTTTTCTTTCC+AGG + Chr7:88702309-88702328 None:intergenic 20.0%
!!! ATATTTTTATTCTTCATGCA+AGG - Chr7:88700852-88700871 MsG0780041243.01.T01:intron 20.0%
!!! ATTAGTGTTTGATTTTGAAT+TGG + Chr7:88700884-88700903 None:intergenic 20.0%
!!! CATATTTCTTATCTATTTTC+TGG - Chr7:88698442-88698461 MsG0780041243.01.T01:CDS 20.0%
!!! TAGTTATTGTTTATGGATTA+TGG - Chr7:88701711-88701730 MsG0780041243.01.T01:intron 20.0%
!!! TATCCTCTTAAATTTGATTT+AGG - Chr7:88703957-88703976 MsG0780041243.01.T01:intron 20.0%
!!! TATTTAATTTTTGTACAGAG+GGG - Chr7:88700605-88700624 MsG0780041243.01.T01:intron 20.0%
!!! TTTTAATTGAAAACTTTCCA+TGG - Chr7:88698230-88698249 MsG0780041243.01.T01:CDS 20.0%
! AAACCATGTTAAACTCTAAT+TGG + Chr7:88701114-88701133 None:intergenic 25.0%
! AACAATAACTACAATAGTAC+AGG + Chr7:88701702-88701721 None:intergenic 25.0%
! AACTCCAAAGTAAGTAATAT+AGG + Chr7:88698697-88698716 None:intergenic 25.0%
! AACTGTTGTTAGATGTAAAA+AGG - Chr7:88702489-88702508 MsG0780041243.01.T01:intron 25.0%
! AATCATGTAACTTGAATGTA+AGG + Chr7:88698416-88698435 None:intergenic 25.0%
! AATTGTGAGAATATCAAAAC+TGG + Chr7:88703414-88703433 None:intergenic 25.0%
! ACTGTGAATTTATTGGAATT+TGG - Chr7:88697745-88697764 MsG0780041243.01.T01:CDS 25.0%
! AGATAAATTCTTCCTACAAA+AGG + Chr7:88698840-88698859 None:intergenic 25.0%
! ATATTGGAGAAATCTAATTC+CGG + Chr7:88700501-88700520 None:intergenic 25.0%
! ATCAGGATATTTAGGAATTA+GGG + Chr7:88704006-88704025 None:intergenic 25.0%
! ATTGTGAGAATATCAAAACT+GGG + Chr7:88703413-88703432 None:intergenic 25.0%
! GAAACAATCTAACTATAACT+AGG + Chr7:88702669-88702688 None:intergenic 25.0%
! GTACTTTGACAATATAATTC+TGG + Chr7:88700916-88700935 None:intergenic 25.0%
! GTCAAAATGACATATAATCT+GGG - Chr7:88702874-88702893 MsG0780041243.01.T01:intron 25.0%
! GTTGTTGTATTTGATGTTTA+TGG - Chr7:88697917-88697936 MsG0780041243.01.T01:CDS 25.0%
! TAAAACCTAGTAAACTTATG+AGG + Chr7:88704425-88704444 None:intergenic 25.0%
! TACAAAATGTCGTCAAATAA+TGG - Chr7:88699539-88699558 MsG0780041243.01.T01:intron 25.0%
! TATCAGGATATTTAGGAATT+AGG + Chr7:88704007-88704026 None:intergenic 25.0%
! TATTACTTCTAATCTGTTAG+TGG - Chr7:88698764-88698783 MsG0780041243.01.T01:intron 25.0%
! TGACTTTATCATAAATCACA+CGG - Chr7:88702252-88702271 MsG0780041243.01.T01:intron 25.0%
! TGGAATTTATCAGGATATTT+AGG + Chr7:88704014-88704033 None:intergenic 25.0%
! TGTCAAAATGACATATAATC+TGG - Chr7:88702873-88702892 MsG0780041243.01.T01:intron 25.0%
! TTAACAAACTGGAATTTATC+AGG + Chr7:88704023-88704042 None:intergenic 25.0%
! TTAACTCTTTAGACATCTAT+AGG - Chr7:88698167-88698186 MsG0780041243.01.T01:CDS 25.0%
! TTCAAATTCTGAATGTTTCT+AGG - Chr7:88699703-88699722 MsG0780041243.01.T01:intron 25.0%
! TTGCTAAATAGCACTTATAA+CGG - Chr7:88699456-88699475 MsG0780041243.01.T01:intron 25.0%
! TTTAATTGTGAATGTTCTTC+AGG - Chr7:88700206-88700225 MsG0780041243.01.T01:intron 25.0%
! TTTGTAGGAAGAATTTATCT+TGG - Chr7:88698840-88698859 MsG0780041243.01.T01:intron 25.0%
!! AAAAAATATCCACATTTTGC+TGG - Chr7:88701423-88701442 MsG0780041243.01.T01:intron 25.0%
!! ATAGCAAAAGTACGTTAAAA+TGG - Chr7:88703568-88703587 MsG0780041243.01.T01:intron 25.0%
!! CATTAATATATGTTTTCCCT+TGG - Chr7:88698611-88698630 MsG0780041243.01.T01:intron 25.0%
!! CATTTTTATGCATGTGAAAT+TGG - Chr7:88698110-88698129 MsG0780041243.01.T01:CDS 25.0%
!! CTAACTTATCTTATGTGTTT+TGG - Chr7:88699115-88699134 MsG0780041243.01.T01:intron 25.0%
!! TAGCAAAAGTACGTTAAAAT+GGG - Chr7:88703569-88703588 MsG0780041243.01.T01:intron 25.0%
!! TCAAATTCTGAATGTTTCTA+GGG - Chr7:88699704-88699723 MsG0780041243.01.T01:intron 25.0%
!! TTAATACAGTTTGCTTATCT+GGG - Chr7:88698082-88698101 MsG0780041243.01.T01:CDS 25.0%
!! TTTTATCCCTATGTTATTCT+GGG - Chr7:88697680-88697699 MsG0780041243.01.T01:CDS 25.0%
!!! AATTGTTTGTTACCTTTTGT+AGG - Chr7:88698825-88698844 MsG0780041243.01.T01:intron 25.0%
!!! AGTATAGAGATTTTAAGAGA+GGG - Chr7:88704150-88704169 MsG0780041243.01.T01:intron 25.0%
!!! ATATAGGTGGTTGATTTTAT+TGG + Chr7:88700423-88700442 None:intergenic 25.0%
!!! ATCTTGATGCTATTTTTTCT+GGG - Chr7:88697622-88697641 MsG0780041243.01.T01:CDS 25.0%
!!! ATGAAGTGTCGTATTTTTTT+TGG - Chr7:88702977-88702996 MsG0780041243.01.T01:intron 25.0%
!!! TATAGGTGGTTGATTTTATT+GGG + Chr7:88700422-88700441 None:intergenic 25.0%
!!! TATCTTGATGCTATTTTTTC+TGG - Chr7:88697621-88697640 MsG0780041243.01.T01:CDS 25.0%
!!! TGATAAATTCCAGTTTGTTA+AGG - Chr7:88704022-88704041 MsG0780041243.01.T01:intron 25.0%
!!! TGTTAATTTGCATTCTTATG+CGG + Chr7:88701193-88701212 None:intergenic 25.0%
AAAATCTCTATACTGATCAC+TGG + Chr7:88704144-88704163 None:intergenic 30.0%
AAAATGACATATAATCTGGG+AGG - Chr7:88702877-88702896 MsG0780041243.01.T01:intron 30.0%
AAATGACATATAATCTGGGA+GGG - Chr7:88702878-88702897 MsG0780041243.01.T01:intron 30.0%
AACGAAAGATAAAATATCCC+AGG + Chr7:88704456-88704475 None:intergenic 30.0%
AAGTCGGAAATTATTTCATC+AGG + Chr7:88703364-88703383 None:intergenic 30.0%
AATCTTAGAACTATCAGCAT+AGG + Chr7:88704279-88704298 None:intergenic 30.0%
AATTTCACGATTAGAATCGT+AGG + Chr7:88700342-88700361 None:intergenic 30.0%
AATTTGCCGTTATTCACTTA+CGG + Chr7:88698208-88698227 None:intergenic 30.0%
ACAAGAACATATCCTGAATA+TGG + Chr7:88702233-88702252 None:intergenic 30.0%
ACATTTACATACCAGATCAT+AGG + Chr7:88701854-88701873 None:intergenic 30.0%
AGGCAATTCAATTTCAATCA+TGG - Chr7:88701011-88701030 MsG0780041243.01.T01:intron 30.0%
ATACATACCCAGAATAACAT+AGG + Chr7:88697690-88697709 None:intergenic 30.0%
ATAGACAAAAAGAGGAGTTT+GGG - Chr7:88699416-88699435 MsG0780041243.01.T01:intron 30.0%
ATCTTAGAACTATCAGCATA+GGG + Chr7:88704278-88704297 None:intergenic 30.0%
ATCTTCCTCATAAGTTTACT+AGG - Chr7:88704417-88704436 MsG0780041243.01.T01:intron 30.0%
ATGGTTTATAGAAACATGAC+TGG - Chr7:88701127-88701146 MsG0780041243.01.T01:intron 30.0%
ATGTGTTGAGATGTAAACAA+GGG - Chr7:88701930-88701949 MsG0780041243.01.T01:intron 30.0%
ATTAGATTTCTCCAATATGC+AGG - Chr7:88700503-88700522 MsG0780041243.01.T01:intron 30.0%
ATTTGATGTTTATGGACTCA+AGG - Chr7:88697925-88697944 MsG0780041243.01.T01:CDS 30.0%
CAACATGCTCAAGATTAATA+TGG + Chr7:88699858-88699877 None:intergenic 30.0%
CAATTCAATTTCAATCATGG+TGG - Chr7:88701014-88701033 MsG0780041243.01.T01:intron 30.0%
CAATTTCAATTACAATCTCG+CGG - Chr7:88703544-88703563 MsG0780041243.01.T01:intron 30.0%
CACTTCGATAACATTAAAAG+AGG + Chr7:88699275-88699294 None:intergenic 30.0%
CATATTAATCTTGAGCATGT+TGG - Chr7:88699856-88699875 MsG0780041243.01.T01:intron 30.0%
CGTGCAATAATCTATTCATA+AGG + Chr7:88701831-88701850 None:intergenic 30.0%
CTCTGACCAAATAATTGATT+AGG - Chr7:88698382-88698401 MsG0780041243.01.T01:CDS 30.0%
GAATTACTTGAGAAGTTTGA+GGG - Chr7:88704385-88704404 MsG0780041243.01.T01:intron 30.0%
GTAATGATACATCCATATTC+AGG - Chr7:88702218-88702237 MsG0780041243.01.T01:intron 30.0%
GTCTAAGAAAATTGCTCTTT+AGG - Chr7:88702082-88702101 MsG0780041243.01.T01:intron 30.0%
GTGCTGAAATATTCATTTAG+AGG + Chr7:88698983-88699002 None:intergenic 30.0%
GTTACAATTTGATATGCTTG+AGG - Chr7:88699878-88699897 MsG0780041243.01.T01:intron 30.0%
GTTGAAGTGTAAAACAACTA+CGG - Chr7:88704473-88704492 MsG0780041243.01.T01:CDS 30.0%
TACAAGTAACAAAAATGCTC+AGG + Chr7:88700171-88700190 None:intergenic 30.0%
TACATACCCAGAATAACATA+GGG + Chr7:88697689-88697708 None:intergenic 30.0%
TATACTATTCCAGCAAAATG+TGG + Chr7:88701435-88701454 None:intergenic 30.0%
TATGTGTTGAGATGTAAACA+AGG - Chr7:88701929-88701948 MsG0780041243.01.T01:intron 30.0%
TCATAAGTTACTTCCACAAA+AGG - Chr7:88700991-88701010 MsG0780041243.01.T01:intron 30.0%
TGAGTTAAAAAATCCAGTCA+TGG - Chr7:88701381-88701400 MsG0780041243.01.T01:intron 30.0%
TGATCCTAAAAGTGATTTGA+TGG - Chr7:88704298-88704317 MsG0780041243.01.T01:CDS 30.0%
TGCACACCTAATCAATTATT+TGG + Chr7:88698391-88698410 None:intergenic 30.0%
TGTAAAAACAAAACCAGCTT+CGG + Chr7:88700700-88700719 None:intergenic 30.0%
TTAGAGGATTCATCAAAATC+TGG + Chr7:88699956-88699975 None:intergenic 30.0%
TTATACATCAAAGCAACCTT+TGG - Chr7:88701993-88702012 MsG0780041243.01.T01:intron 30.0%
TTATCTAGGGAACTGTATAA+AGG - Chr7:88697832-88697851 MsG0780041243.01.T01:CDS 30.0%
TTCAAAGGAACAAATGAAAG+AGG - Chr7:88702587-88702606 MsG0780041243.01.T01:intron 30.0%
TTCGTGTATGAAAAGATAGA+TGG + Chr7:88700557-88700576 None:intergenic 30.0%
TTGAAACAGAAATAGTAAGC+TGG + Chr7:88697200-88697219 None:intergenic 30.0%
! AACAAATATCTGAAATGCCT+AGG + Chr7:88698263-88698282 None:intergenic 30.0%
! AATTACCCTTTTACTCTCAA+CGG - Chr7:88702133-88702152 MsG0780041243.01.T01:intron 30.0%
! AATTTGTTCAGATTCCTTCA+CGG + Chr7:88699489-88699508 None:intergenic 30.0%
! AGTTTTCCGTAAGTGAATAA+CGG - Chr7:88698199-88698218 MsG0780041243.01.T01:CDS 30.0%
! ATAAGTTTTACCATGTGATG+AGG - Chr7:88704562-88704581 MsG0780041243.01.T01:CDS 30.0%
! CTTAATACAGTTTGCTTATC+TGG - Chr7:88698081-88698100 MsG0780041243.01.T01:CDS 30.0%
! CTTTTATCCCTATGTTATTC+TGG - Chr7:88697679-88697698 MsG0780041243.01.T01:CDS 30.0%
! GCTCTAGATTACTTAAGTAT+TGG - Chr7:88699664-88699683 MsG0780041243.01.T01:intron 30.0%
! TACTTATGATGATGAAATCC+AGG - Chr7:88703913-88703932 MsG0780041243.01.T01:CDS 30.0%
! TAGGTTTTACTAGATATCCT+GGG - Chr7:88704436-88704455 MsG0780041243.01.T01:CDS 30.0%
! TCATTGTTCTGTTTTGCAAT+AGG + Chr7:88698804-88698823 None:intergenic 30.0%
! TGAAATTGAATTGCCTTTTG+TGG + Chr7:88701007-88701026 None:intergenic 30.0%
! TTCGATTGTTGTTGGATTTA+GGG + Chr7:88703460-88703479 None:intergenic 30.0%
! TTGATAGTCTGATTTACTCT+CGG + Chr7:88702529-88702548 None:intergenic 30.0%
! TTTTGTTGAAACAGGAACAA+AGG + Chr7:88702052-88702071 None:intergenic 30.0%
! TTTTTCCAATCCTTCTTAGT+TGG + Chr7:88698469-88698488 None:intergenic 30.0%
!! AGGAGGTTTTTCAGAAAATT+TGG - Chr7:88701626-88701645 MsG0780041243.01.T01:CDS 30.0%
!! ATTTTACCTGTGTCATTCAA+AGG - Chr7:88702572-88702591 MsG0780041243.01.T01:intron 30.0%
!! CAAATGAAAGAGGTATTTCA+AGG - Chr7:88702597-88702616 MsG0780041243.01.T01:intron 30.0%
!! CAAGAAAATGCTTTGGAATA+TGG - Chr7:88698039-88698058 MsG0780041243.01.T01:CDS 30.0%
!! CAGTATAGAGATTTTAAGAG+AGG - Chr7:88704149-88704168 MsG0780041243.01.T01:intron 30.0%
!! TATGGTGTGTTTTTCAACAA+TGG + Chr7:88703137-88703156 None:intergenic 30.0%
!! TTCTCCATCAAATCACTTTT+AGG + Chr7:88704305-88704324 None:intergenic 30.0%
!!! CTATCCTAGTTTTGCTATTA+GGG - Chr7:88699990-88700009 MsG0780041243.01.T01:intron 30.0%
!!! CTGGTTTTGTTTTTACAAGT+AGG - Chr7:88700703-88700722 MsG0780041243.01.T01:intron 30.0%
!!! TCAAGTGTCTCTTTTTTAAG+AGG - Chr7:88702952-88702971 MsG0780041243.01.T01:intron 30.0%
!!! TTGTTGTTTTGTCACACTAA+AGG - Chr7:88697951-88697970 MsG0780041243.01.T01:CDS 30.0%
AACCTCCTTGTAAACAACAT+AGG + Chr7:88701614-88701633 None:intergenic 35.0%
AACTGACATTGTGAAAACAC+GGG + Chr7:88701509-88701528 None:intergenic 35.0%
AAGTGAAGACATCAAATGTC+TGG - Chr7:88699807-88699826 MsG0780041243.01.T01:intron 35.0%
AATTGCAGAAACACCATTAC+TGG + Chr7:88704048-88704067 None:intergenic 35.0%
AATTGCCGTTGAGAGTAAAA+GGG + Chr7:88702141-88702160 None:intergenic 35.0%
ACTTCTCAAGTAATTCCTCT+TGG + Chr7:88704381-88704400 None:intergenic 35.0%
AGAGGATAAAGAGACTGAAT+CGG + Chr7:88703945-88703964 None:intergenic 35.0%
AGATGAGCAAGAAAATGCTT+TGG - Chr7:88698032-88698051 MsG0780041243.01.T01:CDS 35.0%
AGATTGAAGAACATCTTCGA+TGG + Chr7:88700740-88700759 None:intergenic 35.0%
AGCATTTGCAGAAACTTGAA+CGG + Chr7:88700028-88700047 None:intergenic 35.0%
AGTTTGATTGATGTTGTTGC+TGG - Chr7:88698870-88698889 MsG0780041243.01.T01:intron 35.0%
ATAAACAAGTAGCCTTCGAT+AGG - Chr7:88700783-88700802 MsG0780041243.01.T01:intron 35.0%
ATGAAAAGATAGATGGCACT+AGG + Chr7:88700550-88700569 None:intergenic 35.0%
ATTAAGACGAGTGACTTGAT+AGG + Chr7:88700126-88700145 None:intergenic 35.0%
ATTAGTCCAATTCCTATCGA+AGG + Chr7:88700798-88700817 None:intergenic 35.0%
ATTCTTGGTGAATTCTCTTC+TGG - Chr7:88697369-88697388 MsG0780041243.01.T01:CDS 35.0%
ATTGCCCTAATAGCAAAACT+AGG + Chr7:88699997-88700016 None:intergenic 35.0%
CAACTGACATTGTGAAAACA+CGG + Chr7:88701510-88701529 None:intergenic 35.0%
CACTGTTGAAAGATTATCGA+AGG - Chr7:88703890-88703909 MsG0780041243.01.T01:CDS 35.0%
CAGTTAACTACCATTCACAT+CGG - Chr7:88702454-88702473 MsG0780041243.01.T01:intron 35.0%
CATAAGATTATGACTCCACA+AGG + Chr7:88701461-88701480 None:intergenic 35.0%
CATAGACAAAAAGAGGAGTT+TGG - Chr7:88699415-88699434 MsG0780041243.01.T01:intron 35.0%
CATGGTAAAACTTATCTCTG+TGG + Chr7:88704557-88704576 None:intergenic 35.0%
CGCGAGATTGTAATTGAAAT+TGG + Chr7:88703546-88703565 None:intergenic 35.0%
CTGACTCATACTCAAATTCA+AGG - Chr7:88698669-88698688 MsG0780041243.01.T01:intron 35.0%
CTTGAATTTGAGTATGAGTC+AGG + Chr7:88698671-88698690 None:intergenic 35.0%
GAGGTAAATATGCAAATCAC+AGG + Chr7:88700580-88700599 None:intergenic 35.0%
GGAATTACTTGAGAAGTTTG+AGG - Chr7:88704384-88704403 MsG0780041243.01.T01:intron 35.0%
GGGATAAAAGCAGTGTAAAA+TGG + Chr7:88697669-88697688 None:intergenic 35.0%
GGTGCCTATATTACTTACTT+TGG - Chr7:88698690-88698709 MsG0780041243.01.T01:intron 35.0%
GTAGACAAGGATTGAAGATA+TGG - Chr7:88701555-88701574 MsG0780041243.01.T01:intron 35.0%
GTAGAGTCATAGACAAAAAG+AGG - Chr7:88699408-88699427 MsG0780041243.01.T01:intron 35.0%
GTATTAAGTGTGTGAGAAGA+AGG + Chr7:88698069-88698088 None:intergenic 35.0%
GTTTGCATAAGAAAACCAAG+AGG - Chr7:88704363-88704382 MsG0780041243.01.T01:intron 35.0%
TAAAGCTGCTTGCTTATAGT+GGG - Chr7:88698334-88698353 MsG0780041243.01.T01:CDS 35.0%
TAAGACTGGAGAAAAGTCAA+AGG - Chr7:88700460-88700479 MsG0780041243.01.T01:intron 35.0%
TAATTGCCGTTGAGAGTAAA+AGG + Chr7:88702142-88702161 None:intergenic 35.0%
TCAGCATAGGGTGAAATATA+AGG + Chr7:88704266-88704285 None:intergenic 35.0%
TCTTCTTCTTCGATTGTTGT+TGG + Chr7:88703468-88703487 None:intergenic 35.0%
TGAAACTCAAAACTTGGAGT+TGG + Chr7:88699208-88699227 None:intergenic 35.0%
TGAAATTGGAGATTCTGACA+TGG + Chr7:88703532-88703551 None:intergenic 35.0%
TGAATACATAGACAGTTTCG+TGG - Chr7:88698937-88698956 MsG0780041243.01.T01:intron 35.0%
TGATAGTCTGATTTACTCTC+GGG + Chr7:88702528-88702547 None:intergenic 35.0%
TGGAATAGTATACTTCCTTG+TGG - Chr7:88701443-88701462 MsG0780041243.01.T01:intron 35.0%
TGTTTATTGCTTAGTTCGTC+TGG + Chr7:88700770-88700789 None:intergenic 35.0%
TTAAAGCTGCTTGCTTATAG+TGG - Chr7:88698333-88698352 MsG0780041243.01.T01:CDS 35.0%
TTCACAATGTCAGTTGTATG+TGG - Chr7:88701514-88701533 MsG0780041243.01.T01:intron 35.0%
TTCTTTGATGCTTGATTCTG+TGG - Chr7:88704635-88704654 MsG0780041243.01.T01:five_prime_UTR 35.0%
TTTGTTCCTTTGAATGACAC+AGG + Chr7:88702581-88702600 None:intergenic 35.0%
! AACCTATGTTGTTTACAAGG+AGG - Chr7:88701609-88701628 MsG0780041243.01.T01:CDS 35.0%
! AAGCAAGTGTTGTCAAATAG+CGG - Chr7:88699910-88699929 MsG0780041243.01.T01:intron 35.0%
! AAGTGAAGCGGCTTTTAAAT+CGG + Chr7:88703634-88703653 None:intergenic 35.0%
! AGCATTGTGGTTTTTGTTAG+AGG + Chr7:88699972-88699991 None:intergenic 35.0%
! AGGGTTTTCTCAAATGAATC+AGG + Chr7:88703987-88704006 None:intergenic 35.0%
! AGTTTGTGAATTGATTTCCC+TGG - Chr7:88702390-88702409 MsG0780041243.01.T01:intron 35.0%
! ATATATGTTTTCCCTTGGAC+TGG - Chr7:88698616-88698635 MsG0780041243.01.T01:intron 35.0%
! ATGGCGTTTTGTGATTATCT+AGG - Chr7:88697818-88697837 MsG0780041243.01.T01:CDS 35.0%
! ATTTTCGTGAACTGCGTAAA+TGG + Chr7:88703868-88703887 None:intergenic 35.0%
! CTAGGTTTTACTAGATATCC+TGG - Chr7:88704435-88704454 MsG0780041243.01.T01:CDS 35.0%
! CTTCGATTGTTGTTGGATTT+AGG + Chr7:88703461-88703480 None:intergenic 35.0%
! GTCAACCTATGTTGTTTACA+AGG - Chr7:88701606-88701625 MsG0780041243.01.T01:CDS 35.0%
! TCAAGAGCATGGAGAAATTA+AGG + Chr7:88702282-88702301 None:intergenic 35.0%
! TCAGAATTTGAAGTCTGATC+TGG + Chr7:88699695-88699714 None:intergenic 35.0%
! TGAATGTTCTTCAGGTTTCT+GGG - Chr7:88700214-88700233 MsG0780041243.01.T01:intron 35.0%
! TGGCGTTTTGTGATTATCTA+GGG - Chr7:88697819-88697838 MsG0780041243.01.T01:CDS 35.0%
! TGGTTGCAGTTACAACTTTT+GGG - Chr7:88699135-88699154 MsG0780041243.01.T01:intron 35.0%
! TGTTAGTGGAATCCTACTTT+TGG - Chr7:88698778-88698797 MsG0780041243.01.T01:intron 35.0%
! TTGGTTGCAGTTACAACTTT+TGG - Chr7:88699134-88699153 MsG0780041243.01.T01:intron 35.0%
! TTTTGCAATAGGCCAAAAGT+AGG + Chr7:88698793-88698812 None:intergenic 35.0%
! TTTTGTCACACTAAAGGATG+TGG - Chr7:88697957-88697976 MsG0780041243.01.T01:CDS 35.0%
!! GATATGGTAGTTGATGAGAA+TGG - Chr7:88701571-88701590 MsG0780041243.01.T01:CDS 35.0%
!! GTGCATTGTTTTGTTGAAAC+AGG + Chr7:88702060-88702079 None:intergenic 35.0%
!! TACTGTATCCATTGATAACG+TGG + Chr7:88702026-88702045 None:intergenic 35.0%
!!! GAAAAAGGTTAGGTTTTGGA+TGG - Chr7:88704223-88704242 MsG0780041243.01.T01:intron 35.0%
!!! GCTATCCTAGTTTTGCTATT+AGG - Chr7:88699989-88700008 MsG0780041243.01.T01:intron 35.0%
!!! TGTTTTTTGTTACCTGGATC+TGG + Chr7:88697493-88697512 None:intergenic 35.0%
AAACTTGGAGTTGGAAGTTC+AGG + Chr7:88699199-88699218 None:intergenic 40.0%
AACAAGCGATGAATTCTGTG+AGG - Chr7:88704701-88704720 MsG0780041243.01.T01:five_prime_UTR 40.0%
AACAGAAATAGTAAGCTGGC+TGG + Chr7:88697196-88697215 None:intergenic 40.0%
AAGGAAGAGAATTCCAACGA+GGG + Chr7:88703797-88703816 None:intergenic 40.0%
AAGTAGCCTTCGATAGGAAT+TGG - Chr7:88700789-88700808 MsG0780041243.01.T01:intron 40.0%
ACAACTGGACAATGTTGGAA+GGG + Chr7:88701057-88701076 None:intergenic 40.0%
ACAAGCGATGAATTCTGTGA+GGG - Chr7:88704702-88704721 MsG0780041243.01.T01:five_prime_UTR 40.0%
ACAGTTTATCACGCGTTCTA+CGG - Chr7:88702702-88702721 MsG0780041243.01.T01:CDS 40.0%
ACCTATATCCCCACATTGAA+TGG - Chr7:88700435-88700454 MsG0780041243.01.T01:intron 40.0%
ACTACGGTTACTCTTAGAGA+AGG - Chr7:88704489-88704508 MsG0780041243.01.T01:CDS 40.0%
ACTGACAGTGCTTGTATTCA+TGG - Chr7:88700296-88700315 MsG0780041243.01.T01:intron 40.0%
AGAACGCGTGATAAACTGTT+AGG + Chr7:88702701-88702720 None:intergenic 40.0%
AGTCAGACCTAACATGTGAA+CGG + Chr7:88702783-88702802 None:intergenic 40.0%
AGTCTTAGCCCATTCAATGT+GGG + Chr7:88700447-88700466 None:intergenic 40.0%
ATCTAACAACTGCGCTGTAT+CGG + Chr7:88703832-88703851 None:intergenic 40.0%
ATGAGGTTTCCTAGAGGTTA+TGG - Chr7:88704194-88704213 MsG0780041243.01.T01:intron 40.0%
ATTATTGCACGCCTATGATC+TGG - Chr7:88701840-88701859 MsG0780041243.01.T01:intron 40.0%
ATTCAATGTGGGGATATAGG+TGG + Chr7:88700436-88700455 None:intergenic 40.0%
ATTCATGGGAAGAATGCTCT+TGG - Chr7:88700311-88700330 MsG0780041243.01.T01:intron 40.0%
ATTTGCAGAAACTTGAACGG+CGG + Chr7:88700025-88700044 None:intergenic 40.0%
CAATAGCGTCTAGCTGAATT+AGG - Chr7:88700069-88700088 MsG0780041243.01.T01:intron 40.0%
CCTATATCCCCACATTGAAT+GGG - Chr7:88700436-88700455 MsG0780041243.01.T01:intron 40.0%
CGTCGAGATGAAATTTCACT+GGG + Chr7:88700669-88700688 None:intergenic 40.0%
CTACGGTTACTCTTAGAGAA+GGG - Chr7:88704490-88704509 MsG0780041243.01.T01:CDS 40.0%
CTGACAGTGCTTGTATTCAT+GGG - Chr7:88700297-88700316 MsG0780041243.01.T01:intron 40.0%
CTGATAAACATCCAGTCCAA+GGG + Chr7:88698630-88698649 None:intergenic 40.0%
GAAAATTCATCACTGTGCCA+AGG - Chr7:88697342-88697361 MsG0780041243.01.T01:CDS 40.0%
GAACGCGTGATAAACTGTTA+GGG + Chr7:88702700-88702719 None:intergenic 40.0%
GAAGTTTCAGATTCGGATGA+TGG - Chr7:88704726-88704745 MsG0780041243.01.T01:five_prime_UTR 40.0%
GAAGTTTGAGAGTGAGATTG+AGG + Chr7:88697412-88697431 None:intergenic 40.0%
GAATATCAAAACTGGGTCAC+TGG + Chr7:88703406-88703425 None:intergenic 40.0%
GAGTTTCACACTGCTTTCAA+TGG - Chr7:88699220-88699239 MsG0780041243.01.T01:intron 40.0%
GATAAGTCCGTTCACATGTT+AGG - Chr7:88702773-88702792 MsG0780041243.01.T01:intron 40.0%
GATCATATACGCGCAATAGA+CGG + Chr7:88701899-88701918 None:intergenic 40.0%
GCAAAACTAGGATAGCATTG+TGG + Chr7:88699985-88700004 None:intergenic 40.0%
GCAGTAAGACTCTTGCAAAA+TGG - Chr7:88700364-88700383 MsG0780041243.01.T01:intron 40.0%
GCAGTGTGAAACTCAAAACT+TGG + Chr7:88699214-88699233 None:intergenic 40.0%
GCGCCAATTAGAGTTTAACA+TGG - Chr7:88701108-88701127 MsG0780041243.01.T01:intron 40.0%
GGATTCCGAGTCCAATAAAT+AGG + Chr7:88698896-88698915 None:intergenic 40.0%
GGGAGGGAGATTAACTATTT+AGG - Chr7:88702894-88702913 MsG0780041243.01.T01:intron 40.0%
GGTAAAACTTATCTCTGTGG+CGG + Chr7:88704554-88704573 None:intergenic 40.0%
GTAAAACTTATCTCTGTGGC+GGG + Chr7:88704553-88704572 None:intergenic 40.0%
GTACGTGTATCCAATGAAGT+TGG - Chr7:88700932-88700951 MsG0780041243.01.T01:intron 40.0%
GTCACTCACTATGTTCAATC+CGG - Chr7:88697452-88697471 MsG0780041243.01.T01:CDS 40.0%
TAAAGCAGTGTTGTCGATCT+CGG + Chr7:88699626-88699645 None:intergenic 40.0%
TCCAAAATTGTCTCGACACA+TGG - Chr7:88701076-88701095 MsG0780041243.01.T01:intron 40.0%
TCCGATTGGCAAAAACTTCT+CGG - Chr7:88703708-88703727 MsG0780041243.01.T01:intron 40.0%
TCGTCAAATAATGGCTGTAG+TGG - Chr7:88699548-88699567 MsG0780041243.01.T01:intron 40.0%
TCGTCGAGATGAAATTTCAC+TGG + Chr7:88700670-88700689 None:intergenic 40.0%
TCTATTGCGCGTATATGATC+TGG - Chr7:88701899-88701918 MsG0780041243.01.T01:intron 40.0%
TCTGTGGAGAACGATGAAAT+GGG - Chr7:88704651-88704670 MsG0780041243.01.T01:five_prime_UTR 40.0%
TGAAATGGGAGATGGAGATT+CGG - Chr7:88704665-88704684 MsG0780041243.01.T01:five_prime_UTR 40.0%
TGAACATAGTGAGTGACGAA+AGG + Chr7:88697449-88697468 None:intergenic 40.0%
TGAGGGTGAAGTTTCAGATT+CGG - Chr7:88704719-88704738 MsG0780041243.01.T01:five_prime_UTR 40.0%
TGCAAAATGGATAATTCCCG+TGG - Chr7:88700377-88700396 MsG0780041243.01.T01:intron 40.0%
TTAACTACCATTCACATCGG+CGG - Chr7:88702457-88702476 MsG0780041243.01.T01:intron 40.0%
TTACTTGAGAAGTTTGAGGG+AGG - Chr7:88704388-88704407 MsG0780041243.01.T01:intron 40.0%
TTCATGGGAAGAATGCTCTT+GGG - Chr7:88700312-88700331 MsG0780041243.01.T01:intron 40.0%
TTCTGTGGAGAACGATGAAA+TGG - Chr7:88704650-88704669 MsG0780041243.01.T01:five_prime_UTR 40.0%
TTGGATAAGCAAAGAGCAGT+AGG + Chr7:88699174-88699193 None:intergenic 40.0%
TTGGGTTATGCAGAGTTACA+GGG - Chr7:88697593-88697612 MsG0780041243.01.T01:CDS 40.0%
TTTATTGGACTCGGAATCCT+TGG - Chr7:88698897-88698916 MsG0780041243.01.T01:intron 40.0%
TTTGGACAACTGGACAATGT+TGG + Chr7:88701062-88701081 None:intergenic 40.0%
! AAACGACAGTTAAGTGTCGT+AGG - Chr7:88702422-88702441 MsG0780041243.01.T01:intron 40.0%
! AAGTTTTTGCCAATCGGAGA+AGG + Chr7:88703706-88703725 None:intergenic 40.0%
! AATTTGGCTTCTGTGTAGAG+TGG - Chr7:88697761-88697780 MsG0780041243.01.T01:CDS 40.0%
! ACAACATAGGTTGACAACGA+AGG + Chr7:88701601-88701620 None:intergenic 40.0%
! AGTTGTATGTGGCTGTTTCA+AGG - Chr7:88701525-88701544 MsG0780041243.01.T01:intron 40.0%
! ATAACCTCTAGGAAACCTCA+TGG + Chr7:88704195-88704214 None:intergenic 40.0%
! ATTTTCTGGGCCAACTAAGA+AGG - Chr7:88698456-88698475 MsG0780041243.01.T01:CDS 40.0%
! GAATGTTCTTCAGGTTTCTG+GGG - Chr7:88700215-88700234 MsG0780041243.01.T01:intron 40.0%
! GGCAGAAAAAGGTTAGGTTT+TGG - Chr7:88704219-88704238 MsG0780041243.01.T01:intron 40.0%
! GTGAATGTTCTTCAGGTTTC+TGG - Chr7:88700213-88700232 MsG0780041243.01.T01:intron 40.0%
! GTTGTATGTGGCTGTTTCAA+GGG - Chr7:88701526-88701545 MsG0780041243.01.T01:intron 40.0%
! GTTGTTGCTGGCCTATTTAT+TGG - Chr7:88698882-88698901 MsG0780041243.01.T01:intron 40.0%
! GTTTTACCATGTGATGAGGA+CGG - Chr7:88704566-88704585 MsG0780041243.01.T01:CDS 40.0%
! TAACCTCTAGGAAACCTCAT+GGG + Chr7:88704194-88704213 None:intergenic 40.0%
! TATCTGAAATGCCTAGGCTT+AGG + Chr7:88698257-88698276 None:intergenic 40.0%
! TCCATGTGTCGAGACAATTT+TGG + Chr7:88701080-88701099 None:intergenic 40.0%
! TCGAGACAATTTTGGACAAC+TGG + Chr7:88701072-88701091 None:intergenic 40.0%
! TCTTAGAGAAGGGTATGCAA+GGG - Chr7:88704500-88704519 MsG0780041243.01.T01:CDS 40.0%
! TGATGGATCCTTGAAACTTG+GGG - Chr7:88704605-88704624 MsG0780041243.01.T01:five_prime_UTR 40.0%
! TTTGGGTTATGCAGAGTTAC+AGG - Chr7:88697592-88697611 MsG0780041243.01.T01:CDS 40.0%
! TTTTACCATGTGATGAGGAC+GGG - Chr7:88704567-88704586 MsG0780041243.01.T01:CDS 40.0%
! TTTTTGTTACCTGGATCTGG+AGG + Chr7:88697490-88697509 None:intergenic 40.0%
!! AGTTCTGAAGAGAACAAACG+AGG + Chr7:88700279-88700298 None:intergenic 40.0%
!! ATAACGGCTTTATTCCGTGA+AGG - Chr7:88699472-88699491 MsG0780041243.01.T01:intron 40.0%
!! CAGTTTGTTAAGGCCAGTAA+TGG - Chr7:88704032-88704051 MsG0780041243.01.T01:intron 40.0%
!! CATTACTGGCCTTAACAAAC+TGG + Chr7:88704034-88704053 None:intergenic 40.0%
!! GCTTTCAATGGTGTTGCATT+GGG - Chr7:88699232-88699251 MsG0780041243.01.T01:intron 40.0%
!! GTATCGGTTAAACGGAAACA+AGG + Chr7:88703816-88703835 None:intergenic 40.0%
!! GTGATGGATCCTTGAAACTT+GGG - Chr7:88704604-88704623 MsG0780041243.01.T01:five_prime_UTR 40.0%
!! GTTTTGAACAGTGACGTTTG+AGG - Chr7:88699746-88699765 MsG0780041243.01.T01:intron 40.0%
!! TGCTTTCAATGGTGTTGCAT+TGG - Chr7:88699231-88699250 MsG0780041243.01.T01:intron 40.0%
!!! TTTTTTCAAGGCACCATGAC+TGG + Chr7:88701397-88701416 None:intergenic 40.0%
AAGGCTTTCGACGTTGATAC+CGG - Chr7:88700479-88700498 MsG0780041243.01.T01:intron 45.0%
ACCATGCAAGACCTGCATAT+TGG + Chr7:88700517-88700536 None:intergenic 45.0%
AGCATCTTCCCCAAGTTTCA+AGG + Chr7:88704616-88704635 None:intergenic 45.0%
AGCCACAAACAAGCAAGCAA+GGG + Chr7:88698721-88698740 None:intergenic 45.0%
AGGTTTCCTAGAGGTTATGG+TGG - Chr7:88704197-88704216 MsG0780041243.01.T01:intron 45.0%
ATAACGTGGTTGTCGTCCAA+AGG + Chr7:88702012-88702031 None:intergenic 45.0%
ATAGACAGTTTCGTGGTCTC+AGG - Chr7:88698944-88698963 MsG0780041243.01.T01:intron 45.0%
ATTCACCAAGAATCGCACCT+TGG + Chr7:88697362-88697381 None:intergenic 45.0%
ATTCATCACACCAACCCACA+AGG + Chr7:88704073-88704092 None:intergenic 45.0%
CAAGGAAGAGAATTCCAACG+AGG + Chr7:88703798-88703817 None:intergenic 45.0%
CAGTCTTAGCCCATTCAATG+TGG + Chr7:88700448-88700467 None:intergenic 45.0%
CCCATTCAATGTGGGGATAT+AGG + Chr7:88700439-88700458 None:intergenic 45.0%
CGAGATGAAATTTCACTGGG+TGG + Chr7:88700666-88700685 None:intergenic 45.0%
GACAACTGGACAATGTTGGA+AGG + Chr7:88701058-88701077 None:intergenic 45.0%
GACGACAACCACGTTATCAA+TGG - Chr7:88702015-88702034 MsG0780041243.01.T01:intron 45.0%
GACTTCTGTTGCACTGTACT+CGG - Chr7:88703379-88703398 MsG0780041243.01.T01:intron 45.0%
GAGAACGATGAAATGGGAGA+TGG - Chr7:88704657-88704676 MsG0780041243.01.T01:five_prime_UTR 45.0%
GAGATGCATGAGAACAAAGC+AGG + Chr7:88702111-88702130 None:intergenic 45.0%
GAGCATGGAGAAATTAAGGC+AGG + Chr7:88702278-88702297 None:intergenic 45.0%
GAGTACAGTGCAACAGAAGT+CGG + Chr7:88703380-88703399 None:intergenic 45.0%
GAGTCAGGACATAGTGCAAA+AGG + Chr7:88698656-88698675 None:intergenic 45.0%
GCTGATAAACATCCAGTCCA+AGG + Chr7:88698631-88698650 None:intergenic 45.0%
GGGAATTCATGGAAGAGAGT+AGG + Chr7:88703771-88703790 None:intergenic 45.0%
GGTTTCCTAGAGGTTATGGT+GGG - Chr7:88704198-88704217 MsG0780041243.01.T01:intron 45.0%
GTAGAGTGGTCATGGTCAAT+TGG - Chr7:88697775-88697794 MsG0780041243.01.T01:CDS 45.0%
GTCTTAGCCCATTCAATGTG+GGG + Chr7:88700446-88700465 None:intergenic 45.0%
GTTTCTGCAATTCGCCTTGT+GGG - Chr7:88704056-88704075 MsG0780041243.01.T01:intron 45.0%
GTTTGTGGCTCTTGTGGTTT+AGG - Chr7:88698731-88698750 MsG0780041243.01.T01:intron 45.0%
TAAGAGAGGGAAAACTGCGT+TGG - Chr7:88704163-88704182 MsG0780041243.01.T01:intron 45.0%
TAGACAGTTTCGTGGTCTCA+GGG - Chr7:88698945-88698964 MsG0780041243.01.T01:intron 45.0%
TAGGATACCTGCGGATGAAA+CGG + Chr7:88703752-88703771 None:intergenic 45.0%
TAGGCAGATGACGTTGTTGA+TGG - Chr7:88697799-88697818 MsG0780041243.01.T01:CDS 45.0%
TCACTGTAAGCCAAAGTCCA+AGG + Chr7:88698917-88698936 None:intergenic 45.0%
TCCAATATGCAGGTCTTGCA+TGG - Chr7:88700513-88700532 MsG0780041243.01.T01:intron 45.0%
TCTTATGCGGTCCGCAAATA+TGG + Chr7:88701180-88701199 None:intergenic 45.0%
TTCCAGGCATTTCAAGAGCA+TGG + Chr7:88702293-88702312 None:intergenic 45.0%
TTCCCTTGCTTGCTTGTTTG+TGG - Chr7:88698716-88698735 MsG0780041243.01.T01:intron 45.0%
TTCGTGGTCTCAGGGAAAAA+CGG - Chr7:88698953-88698972 MsG0780041243.01.T01:intron 45.0%
TTGCTTGTTTGTGGCTCTTG+TGG - Chr7:88698725-88698744 MsG0780041243.01.T01:intron 45.0%
TTTACCATGTGATGAGGACG+GGG - Chr7:88704568-88704587 MsG0780041243.01.T01:CDS 45.0%
TTTCCCATGAGGTTTCCTAG+AGG - Chr7:88704188-88704207 MsG0780041243.01.T01:intron 45.0%
! AGCGTCTTTGAGAAGTGAAG+CGG + Chr7:88703646-88703665 None:intergenic 45.0%
! CGACACTTAACTGTCGTTTG+TGG + Chr7:88702421-88702440 None:intergenic 45.0%
! CTCTTAGAGAAGGGTATGCA+AGG - Chr7:88704499-88704518 MsG0780041243.01.T01:CDS 45.0%
! CTTAGAGAAGGGTATGCAAG+GGG - Chr7:88704501-88704520 MsG0780041243.01.T01:CDS 45.0%
! GCCGAGAAGTTTTTGCCAAT+CGG + Chr7:88703712-88703731 None:intergenic 45.0%
! GCTGGCCTATTTATTGGACT+CGG - Chr7:88698888-88698907 MsG0780041243.01.T01:intron 45.0%
! TGTTTCTGCAATTCGCCTTG+TGG - Chr7:88704055-88704074 MsG0780041243.01.T01:intron 45.0%
! TTAGAGAAGGGTATGCAAGG+GGG - Chr7:88704502-88704521 MsG0780041243.01.T01:CDS 45.0%
! TTGCCAATCGGAGAAGGTTT+TGG + Chr7:88703700-88703719 None:intergenic 45.0%
!! ACTGCGCTGTATCGGTTAAA+CGG + Chr7:88703824-88703843 None:intergenic 45.0%
!! AGGTTATGGTGGGCAGAAAA+AGG - Chr7:88704208-88704227 MsG0780041243.01.T01:intron 45.0%
!! ATGGTGGGCAGAAAAAGGTT+AGG - Chr7:88704213-88704232 MsG0780041243.01.T01:intron 45.0%
!! CACATTGAATGGGCTAAGAC+TGG - Chr7:88700446-88700465 MsG0780041243.01.T01:intron 45.0%
!! GCTTATAGTGGGTTGCTGTT+GGG - Chr7:88698345-88698364 MsG0780041243.01.T01:CDS 45.0%
!! GGGTTGGTGTGATGAATTTG+CGG - Chr7:88704076-88704095 MsG0780041243.01.T01:intron 45.0%
!! GGTGATGGATCCTTGAAACT+TGG - Chr7:88704603-88704622 MsG0780041243.01.T01:five_prime_UTR 45.0%
!! TGCTTATAGTGGGTTGCTGT+TGG - Chr7:88698344-88698363 MsG0780041243.01.T01:CDS 45.0%
!!! GGGCTCTGTTTTTTGTTACC+TGG + Chr7:88697499-88697518 None:intergenic 45.0%
!!! TTTTTTTTTTTTTTTTAGAA+AGG - Chr7:88702638-88702657 MsG0780041243.01.T01:intron 5.0%
AACGAGGGTGAGGGAATTCA+TGG + Chr7:88703782-88703801 None:intergenic 50.0%
AATGCCTAGGCTTAGGTCCA+TGG + Chr7:88698250-88698269 None:intergenic 50.0%
AATGGGAGATGGAGATTCGG+AGG - Chr7:88704668-88704687 MsG0780041243.01.T01:five_prime_UTR 50.0%
ACAAACGAGGAACAGTGCTG+TGG + Chr7:88700266-88700285 None:intergenic 50.0%
ACCTGGATCTGGAGGAGAAT+TGG + Chr7:88697482-88697501 None:intergenic 50.0%
AGACTGAATCGGAACAGTCC+TGG + Chr7:88703934-88703953 None:intergenic 50.0%
AGAGAATTCCAACGAGGGTG+AGG + Chr7:88703792-88703811 None:intergenic 50.0%
AGATGGAGATTCGGAGGAAG+AGG - Chr7:88704674-88704693 MsG0780041243.01.T01:five_prime_UTR 50.0%
AGGGTATGCAAGGGGGAAAT+TGG - Chr7:88704509-88704528 MsG0780041243.01.T01:CDS 50.0%
ATGAATTCCCTCACCCTCGT+TGG - Chr7:88703781-88703800 MsG0780041243.01.T01:intron 50.0%
CACGGGTCACGCAATATTCA+CGG + Chr7:88701492-88701511 None:intergenic 50.0%
CAGTGCTGTGGTGAAACTGA+TGG + Chr7:88700254-88700273 None:intergenic 50.0%
CCCGTGGTAGCAAACACATT+GGG - Chr7:88700393-88700412 MsG0780041243.01.T01:intron 50.0%
CCTGGATCTGGAGGAGAATT+GGG + Chr7:88697481-88697500 None:intergenic 50.0%
CGCGTGATAAACTGTTAGGG+TGG + Chr7:88702697-88702716 None:intergenic 50.0%
CGTCTAGCTGAATTAGGCTC+AGG - Chr7:88700075-88700094 MsG0780041243.01.T01:intron 50.0%
CTCCATGCTCTTGAAATGCC+TGG - Chr7:88702288-88702307 MsG0780041243.01.T01:intron 50.0%
CTGGATCTGGAGGAGAATTG+GGG + Chr7:88697480-88697499 None:intergenic 50.0%
CTGGGCCAACTAAGAAGGAT+TGG - Chr7:88698461-88698480 MsG0780041243.01.T01:CDS 50.0%
CTTTCCATGGACCTAAGCCT+AGG - Chr7:88698243-88698262 MsG0780041243.01.T01:CDS 50.0%
GAAATAGTAAGCTGGCTGGC+TGG + Chr7:88697192-88697211 None:intergenic 50.0%
GACTCGGAATCCTTGGACTT+TGG - Chr7:88698904-88698923 MsG0780041243.01.T01:intron 50.0%
GAGAATTCCAACGAGGGTGA+GGG + Chr7:88703791-88703810 None:intergenic 50.0%
GAGCCACAAACAAGCAAGCA+AGG + Chr7:88698722-88698741 None:intergenic 50.0%
GCTTCTGTGTAGAGTGGTCA+TGG - Chr7:88697767-88697786 MsG0780041243.01.T01:CDS 50.0%
GGAAGAGAGTAGGATACCTG+CGG + Chr7:88703761-88703780 None:intergenic 50.0%
GGAGTTGGAAGTTCAGGAGT+TGG + Chr7:88699193-88699212 None:intergenic 50.0%
GGGCTTCTTTATCGTGGTGA+TGG - Chr7:88704588-88704607 MsG0780041243.01.T01:exon 50.0%
GTAGCAGTTACTCTCCTCAC+TGG + Chr7:88698009-88698028 None:intergenic 50.0%
GTATGCAAGGGGGAAATTGG+TGG - Chr7:88704512-88704531 MsG0780041243.01.T01:CDS 50.0%
GTGGCTCTTGTGGTTTAGGT+AGG - Chr7:88698735-88698754 MsG0780041243.01.T01:intron 50.0%
GTGGTCATGGTCAATTGGCT+AGG - Chr7:88697780-88697799 MsG0780041243.01.T01:CDS 50.0%
GTTATGCAGAGTTACAGGGC+TGG - Chr7:88697597-88697616 MsG0780041243.01.T01:CDS 50.0%
TCCCGTGGTAGCAAACACAT+TGG - Chr7:88700392-88700411 MsG0780041243.01.T01:intron 50.0%
TTAACCCGTGCGTATGAGCA+CGG - Chr7:88701957-88701976 MsG0780041243.01.T01:intron 50.0%
TTCTGCCCACCATAACCTCT+AGG + Chr7:88704206-88704225 None:intergenic 50.0%
! CCCAATGTGTTTGCTACCAC+GGG + Chr7:88700396-88700415 None:intergenic 50.0%
! GCCCAATGTGTTTGCTACCA+CGG + Chr7:88700397-88700416 None:intergenic 50.0%
! TGATGGAGAAGCGCGTTGTT+GGG - Chr7:88704315-88704334 MsG0780041243.01.T01:intron 50.0%
! TGTCGTTTGTGGCTTGTCCA+GGG + Chr7:88702410-88702429 None:intergenic 50.0%
! TTGATGGAGAAGCGCGTTGT+TGG - Chr7:88704314-88704333 MsG0780041243.01.T01:intron 50.0%
!! CCAATCGGAGAAGGTTTTGG+CGG + Chr7:88703697-88703716 None:intergenic 50.0%
!!! CTGCGTTGGTTTTTCCCATG+AGG - Chr7:88704177-88704196 MsG0780041243.01.T01:intron 50.0%
ACTGGTGGAGATGCAGGTCT+TGG + Chr7:88697991-88698010 None:intergenic 55.0%
AGGACGGGGCTTCTTTATCG+TGG - Chr7:88704582-88704601 MsG0780041243.01.T01:exon 55.0%
CCCAATTCTCCTCCAGATCC+AGG - Chr7:88697478-88697497 MsG0780041243.01.T01:intron 55.0%
CCGCCAAAACCTTCTCCGAT+TGG - Chr7:88703694-88703713 MsG0780041243.01.T01:intron 55.0%
CCTGCGGATGAAACGGAGAA+CGG + Chr7:88703745-88703764 None:intergenic 55.0%
CGACGAGAATTCACCGAAGC+TGG - Chr7:88700684-88700703 MsG0780041243.01.T01:intron 55.0%
CTCTAGTCCGCCGATGTGAA+TGG + Chr7:88702467-88702486 None:intergenic 55.0%
CTGCAATTCGCCTTGTGGGT+TGG - Chr7:88704060-88704079 MsG0780041243.01.T01:intron 55.0%
CTGCGGATGAAACGGAGAAC+GGG + Chr7:88703744-88703763 None:intergenic 55.0%
CTGGAGGAGAATTGGGGTTC+CGG + Chr7:88697474-88697493 None:intergenic 55.0%
CTGTGCCAAGGTGCGATTCT+TGG - Chr7:88697354-88697373 MsG0780041243.01.T01:CDS 55.0%
GATGAAACGGAGAACGGGGA+CGG + Chr7:88703739-88703758 None:intergenic 55.0%
GCAGTTACTCTCCTCACTGG+TGG + Chr7:88698006-88698025 None:intergenic 55.0%
TAACCCGTGCGTATGAGCAC+GGG - Chr7:88701958-88701977 MsG0780041243.01.T01:intron 55.0%
TCAAGGGTCACGCGTAGACA+AGG - Chr7:88701542-88701561 MsG0780041243.01.T01:intron 55.0%
TGCAGGTCTTGCATGGTCTG+TGG - Chr7:88700520-88700539 MsG0780041243.01.T01:intron 55.0%
TGCGGATGAAACGGAGAACG+GGG + Chr7:88703743-88703762 None:intergenic 55.0%
TTTGGCGGTGAGGAAAGAGG+TGG + Chr7:88703682-88703701 None:intergenic 55.0%
! CTGTCGTTTGTGGCTTGTCC+AGG + Chr7:88702411-88702430 None:intergenic 55.0%
! GATGGAGAAGCGCGTTGTTG+GGG - Chr7:88704316-88704335 MsG0780041243.01.T01:intron 55.0%
!! GGTTTTGGCGGTGAGGAAAG+AGG + Chr7:88703685-88703704 None:intergenic 55.0%
!! TTATCTCTGTGGCGGGCAAG+CGG + Chr7:88704546-88704565 None:intergenic 55.0%
AGACCCGTGCTCATACGCAC+GGG + Chr7:88701964-88701983 None:intergenic 60.0%
CAGACCCGTGCTCATACGCA+CGG + Chr7:88701965-88701984 None:intergenic 60.0%
CCGTTCTCCGTTTCATCCGC+AGG - Chr7:88703742-88703761 MsG0780041243.01.T01:intron 60.0%
CTCCTCACTGGTGGAGATGC+AGG + Chr7:88697997-88698016 None:intergenic 60.0%
GAAGCCCCGTCCTCATCACA+TGG + Chr7:88704575-88704594 None:intergenic 60.0%
GACCTGCATCTCCACCAGTG+AGG - Chr7:88697992-88698011 MsG0780041243.01.T01:CDS 60.0%
!! CGGAGAAGGTTTTGGCGGTG+AGG + Chr7:88703692-88703711 None:intergenic 60.0%
GGCGGTGAGGAAAGAGGTGG+AGG + Chr7:88703679-88703698 None:intergenic 65.0%
!! CTGTGGCGGGCAAGCGGATG+CGG + Chr7:88704540-88704559 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 88697177 88704755 88697177 ID=MsG0780041243.01;Name=MsG0780041243.01
Chr7 mRNA 88697177 88704755 88697177 ID=MsG0780041243.01.T01;Parent=MsG0780041243.01;Name=MsG0780041243.01.T01;_AED=0.49;_eAED=0.51;_QI=162|0.28|0.37|1|0.85|0.75|8|0|653
Chr7 exon 88697177 88697483 88697177 ID=MsG0780041243.01.T01:exon:12192;Parent=MsG0780041243.01.T01
Chr7 exon 88697584 88698525 88697584 ID=MsG0780041243.01.T01:exon:12191;Parent=MsG0780041243.01.T01
Chr7 exon 88701566 88701704 88701566 ID=MsG0780041243.01.T01:exon:12190;Parent=MsG0780041243.01.T01
Chr7 exon 88702670 88702788 88702670 ID=MsG0780041243.01.T01:exon:12189;Parent=MsG0780041243.01.T01
Chr7 exon 88703829 88703959 88703829 ID=MsG0780041243.01.T01:exon:12188;Parent=MsG0780041243.01.T01
Chr7 exon 88704079 88704153 88704079 ID=MsG0780041243.01.T01:exon:12187;Parent=MsG0780041243.01.T01
Chr7 exon 88704231 88704318 88704231 ID=MsG0780041243.01.T01:exon:12186;Parent=MsG0780041243.01.T01
Chr7 exon 88704433 88704755 88704433 ID=MsG0780041243.01.T01:exon:12185;Parent=MsG0780041243.01.T01
Chr7 five_prime_UTR 88704594 88704755 88704594 ID=MsG0780041243.01.T01:five_prime_utr;Parent=MsG0780041243.01.T01
Chr7 CDS 88704433 88704593 88704433 ID=MsG0780041243.01.T01:cds;Parent=MsG0780041243.01.T01
Chr7 CDS 88704231 88704318 88704231 ID=MsG0780041243.01.T01:cds;Parent=MsG0780041243.01.T01
Chr7 CDS 88704079 88704153 88704079 ID=MsG0780041243.01.T01:cds;Parent=MsG0780041243.01.T01
Chr7 CDS 88703829 88703959 88703829 ID=MsG0780041243.01.T01:cds;Parent=MsG0780041243.01.T01
Chr7 CDS 88702670 88702788 88702670 ID=MsG0780041243.01.T01:cds;Parent=MsG0780041243.01.T01
Chr7 CDS 88701566 88701704 88701566 ID=MsG0780041243.01.T01:cds;Parent=MsG0780041243.01.T01
Chr7 CDS 88697584 88698525 88697584 ID=MsG0780041243.01.T01:cds;Parent=MsG0780041243.01.T01
Chr7 CDS 88697177 88697483 88697177 ID=MsG0780041243.01.T01:cds;Parent=MsG0780041243.01.T01
Gene Sequence

>MsG0780041243.01.T01

ATGGAAAATTCATCACTGTGCCAAGGTGCGATTCTTGGTGAATTCTCTTCTGGCTTCTCTCTTCTTCATACCTCAATCTCACTCTCAAACTTCGATCTTTTCTTCAACCTTTCGTCACTCACTATGTTCAATCCGGAACCCCAATTCTCCTCCAGATCCAGGGCTGGATATCTTGATGCTATTTTTTCTGGGTTGTCTTGTGTTGTTTCTGTGCCATTTTACACTGCTTTTATCCCTATGTTATTCTGGAGTGGTCATGGTCAATTGGCTAGGCAGATGACGTTGTTGATGGCGTTTTGTGATTATCTAGGGAACTGTATAAAGGATGTGGTTTCAGCACCAAGACCTGCATCTCCACCAGTGAGGAGAGTAACTGCTACAAAAGATGAGCAAGAAAATGCTTTGGAATATGGATTGCCTTCTTCTCACACACTTAATACAGTTTGCTTATCTGGTTACAACTTTTGGGCTGCTTTGAGCTTCCTACTGCTCTTTGCTTATCCAACTCCTGAACTTCCAACTCCAAGTTTTGAGTTTCACACTGCTTTCAATGGTGTTGCATTGGGAATTGTAAGTTTCTGGGGTACAGCAAACATACCATCAGTTTCACCACAGCACTGTTCCTCGTTTGTTCTCTTCAGAACTGACAGTGCTTGTATTCATGGGAAGAATGCTCTTGGGAATACCTACGATTCTAATCGTGAAATTCTGCATGACCCAGTTTTGATATTCTCACAATTTTACTCTTGCTTCATCAATCAAACCCTAAATCCAACAACAATCGAAGAAGAAGATGATGATGATGATAAACAAGTTCAAAAATGCAATGCTGCTTCCATGTCAGAATCTCCAATTTCAATTACAATCTCGCGGCATAGCAAAAGTACGTTAAAATGGGTTAAAAATCGAAGCATAGATCACATAATCGACAAAGAAACCGATTTAAAAGCCGCTTCACTTCTCAAAGACGCTATCAAACGTTCCTCCACCTCTTTCCTCACCGCCAAAACCTTCTCCGATTGGCAAAAACTTCTCGGCTTAACCGTCCCCGTTCTCCGTTTCATCCGCAGGTATCCTACTCTCTTCCATGAATTCCCTCACCCTCGTTGGAATTCTCTTCCTTGTTTCCGTTTAACCGATACAGCGCAGTTGTTAGATTCTCAAGAACAAACCATTTACGCAGTTCACGAAAATGACACTGTTGAAAGATTATCGAAGGTACTTATGATGATGAAATCCAGGACTGTTCCGATTCAGTCTCTTTATCCTCTTAAATTTGATTTAGGTTTACCTGATTCATTTGAGAAAACCCTAATTCCTAAATATCCTGATAAATTCCAGTTTGTTAAGGCCAGTAATGGTGTTTCTGCAATTCGCCTTGTGGGTTGGTGTGATGAATTTGCGGTTTCTGCTTTGCAGAAGAGTAATGAGTGTGAGAGTGAGAGTGCCAGTGATCAGTATAGAGATTTTAAGAGAGGGAAAACTGCGTTGGTTTTTCCCATGAGGTTTCCTAGAGGTTATGGTGGGCAGAAAAAGGTTAGGTTTTGGATGGATGAGTTTCAGAAATTGCCTTATATTTCACCCTATGCTGATAGTTCTAAGATTGATCCTAAAAGTGATTTGATGGAGAAGCGCGTTGTTGGGGTTTTGCATGAATATCCTGGGATATTTTATCTTTCGTTGAAGTGTAAAACAACTACGGTTACTCTTAGAGAAGGGTATGCAAGGGGGAAATTGGTGGATCCGCATCCGCTTGCCCGCCACAGAGATAAGTTTTACCATGTGATGAGGACGGGGCTTCTTTATCGTGGTGATGGATCCTTGAAACTTGGGGAAGATGCTTCTTTGATGCTTGATTCTGTGGAGAACGATGAAATGGGAGATGGAGATTCGGAGGAAGAGGTTGAAACAAGCGATGAATTCTGTGAGGGTGAAGTTTCAGATTCGGATGATGGTGAATGA
Protein sequence

>MsG0780041243.01.T01

MENSSLCQGAILGEFSSGFSLLHTSISLSNFDLFFNLSSLTMFNPEPQFSSRSRAGYLDAIFSGLSCVVSVPFYTAFIPMLFWSGHGQLARQMTLLMAFCDYLGNCIKDVVSAPRPASPPVRRVTATKDEQENALEYGLPSSHTLNTVCLSGYNFWAALSFLLLFAYPTPELPTPSFEFHTAFNGVALGIVSFWGTANIPSVSPQHCSSFVLFRTDSACIHGKNALGNTYDSNREILHDPVLIFSQFYSCFINQTLNPTTIEEEDDDDDKQVQKCNAASMSESPISITISRHSKSTLKWVKNRSIDHIIDKETDLKAASLLKDAIKRSSTSFLTAKTFSDWQKLLGLTVPVLRFIRRYPTLFHEFPHPRWNSLPCFRLTDTAQLLDSQEQTIYAVHENDTVERLSKVLMMMKSRTVPIQSLYPLKFDLGLPDSFEKTLIPKYPDKFQFVKASNGVSAIRLVGWCDEFAVSALQKSNECESESASDQYRDFKRGKTALVFPMRFPRGYGGQKKVRFWMDEFQKLPYISPYADSSKIDPKSDLMEKRVVGVLHEYPGIFYLSLKCKTTTVTLREGYARGKLVDPHPLARHRDKFYHVMRTGLLYRGDGSLKLGEDASLMLDSVENDEMGDGDSEEEVETSDEFCEGEVSDSDDGE*