AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045141.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045141.01.T01 MTR_8g066340 99.635 274 1 0 1 274 1 274 0.0 555
MsG0880045141.01.T01 MTR_5g029650 83.206 262 38 1 1 262 1 256 1.78e-146 411
MsG0880045141.01.T01 MTR_7g084590 59.191 272 103 2 1 272 1 264 3.86e-106 309
MsG0880045141.01.T01 MTR_1g083790 24.296 284 184 9 2 270 52 319 1.55e-12 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045141.01.T01 AT5G46860 77.099 262 54 2 1 262 1 256 4.33e-145 407
MsG0880045141.01.T01 AT4G17730 72.308 260 67 2 1 257 1 258 2.53e-119 342
MsG0880045141.01.T01 AT4G17730 75.510 245 57 1 1 242 1 245 7.47e-119 341
MsG0880045141.01.T01 AT5G16830 63.569 269 89 3 1 262 1 267 6.86e-116 334
MsG0880045141.01.T01 AT1G32270 54.772 241 88 5 33 258 107 341 6.47e-76 234
MsG0880045141.01.T01 AT1G32270 54.348 230 84 5 33 247 107 330 2.34e-69 220
MsG0880045141.01.T01 AT5G26980 27.928 222 136 6 56 271 114 317 1.39e-13 70.1
MsG0880045141.01.T01 AT5G26980 27.928 222 136 6 56 271 114 317 1.39e-13 70.1
MsG0880045141.01.T01 AT5G26980 27.928 222 136 6 56 271 114 317 1.39e-13 70.1
MsG0880045141.01.T01 AT3G05710 28.378 222 136 6 56 271 122 326 3.71e-13 68.9
MsG0880045141.01.T01 AT3G05710 28.378 222 136 6 56 271 121 325 4.30e-13 68.6
MsG0880045141.01.T01 AT4G02195 33.333 87 58 0 186 272 232 318 5.60e-12 65.5

Find 93 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTCTTATGTTGGTGTT+TGG 0.231337 8:-54859859 MsG0880045141.01.T01:three_prime_UTR
CGAAGCTCAGGGGTATCTTT+GGG 0.233346 8:+54864518 None:intergenic
TCTCTCTTATGTTGGTGTTT+GGG 0.269260 8:-54859858 MsG0880045141.01.T01:three_prime_UTR
AAACCTGAAGCTTTCAGTTT+TGG 0.279648 8:+54859652 None:intergenic
ACGAAGCTCAGGGGTATCTT+TGG 0.288713 8:+54864517 None:intergenic
CAATCATGGTTCCTTGTTCA+TGG 0.303623 8:+54861309 None:intergenic
TTTCCAAAACTGAAAGCTTC+AGG 0.304637 8:-54859655 MsG0880045141.01.T01:three_prime_UTR
ACAAAGATCAAATTCATCTT+TGG 0.317195 8:-54861105 MsG0880045141.01.T01:intron
TCTTAAGGCATGCTTGCTTT+TGG 0.320741 8:-54860127 MsG0880045141.01.T01:intron
CAAGAAATACAGCAGCAAAT+TGG 0.361872 8:-54861371 MsG0880045141.01.T01:CDS
CACAAGCAGTTCTTCCTTCG+AGG 0.364366 8:-54862384 MsG0880045141.01.T01:intron
ACAAAATCACAATATACTTA+AGG 0.368205 8:+54859896 None:intergenic
TTTACTGAGTCTCGGTTGAT+TGG 0.371529 8:-54859959 MsG0880045141.01.T01:three_prime_UTR
CTGAAAGCTTCAGGTTTGCT+TGG 0.372167 8:-54859646 MsG0880045141.01.T01:three_prime_UTR
TGCTTGTGCAGTTGCTGCAT+GGG 0.379673 8:+54861157 None:intergenic
ACAAGAAGGGCACGCTGTTC+TGG 0.388742 8:+54862059 None:intergenic
TCAGAGAATTATGAGCTTCC+AGG 0.393794 8:-54864687 MsG0880045141.01.T01:exon
AAATCAATGTCTTGCTGAAA+AGG 0.400320 8:+54859713 None:intergenic
ATTGAAGCTGGCCGGCCGTT+CGG 0.402656 8:-54864662 MsG0880045141.01.T01:CDS
GGTGTTACATTTACAAGTAA+AGG 0.406881 8:+54859755 None:intergenic
TGTTATGTTCTCTCTTATGT+TGG 0.413888 8:-54859866 MsG0880045141.01.T01:three_prime_UTR
ACAGCTAGTGAAATGGATAT+TGG 0.419510 8:-54862095 MsG0880045141.01.T01:CDS
AAGAAATAAGTTACCAATCA+TGG 0.419678 8:+54861295 None:intergenic
CCGGCAGCCACCGCTTGCGT+TGG 0.420644 8:+54864602 None:intergenic
CAGAGACTCGTTAATACCCT+TGG 0.421043 8:-54864545 MsG0880045141.01.T01:CDS
CAAAATCACAATATACTTAA+GGG 0.422706 8:+54859897 None:intergenic
CACAAGACAAGACAACATAT+TGG 0.424638 8:-54862930 MsG0880045141.01.T01:CDS
GAAAGAAGAAAATGAAGATT+CGG 0.427038 8:+54864846 None:intergenic
CGGCAGCCACCGCTTGCGTT+GGG 0.428451 8:+54864603 None:intergenic
AGTTTGGATCATCGAATTGT+AGG 0.432370 8:-54864729 MsG0880045141.01.T01:five_prime_UTR
GGAGTCAGCACTGCGAATTT+CGG 0.433074 8:+54859734 None:intergenic
GTCACTAGCTTGTTTAAGCT+TGG 0.437547 8:+54862884 None:intergenic
CAGCTACACAGCTAGTGAAA+TGG 0.437903 8:-54862102 MsG0880045141.01.T01:CDS
CATGAACAAGGAACCATGAT+TGG 0.438688 8:-54861308 MsG0880045141.01.T01:intron
CTCTCTTATGTTGGTGTTTG+GGG 0.441582 8:-54859857 MsG0880045141.01.T01:three_prime_UTR
GAAGCTCAGGGGTATCTTTG+GGG 0.447352 8:+54864519 None:intergenic
GCCGGCCAGCTTCAATATCC+TGG 0.456879 8:+54864669 None:intergenic
AGAAAATGAAGATTCGGATT+CGG 0.460739 8:+54864852 None:intergenic
TTGCTTGTGCAGTTGCTGCA+TGG 0.462390 8:+54861156 None:intergenic
TGTTGATGTTGTCACTTAAG+TGG 0.463435 8:-54859985 MsG0880045141.01.T01:three_prime_UTR
ACAAGACAAGACAACATATT+GGG 0.464117 8:-54862929 MsG0880045141.01.T01:CDS
GGGTCTTGCTTTCCGTTGAT+CGG 0.466640 8:+54864623 None:intergenic
TGAAAGCTTCAGGTTTGCTT+GGG 0.471110 8:-54859645 MsG0880045141.01.T01:three_prime_UTR
AGAACTGCTTGTGGAACAAA+AGG 0.482721 8:+54862394 None:intergenic
TGAGGCAATCATTGAGGAAA+GGG 0.485569 8:-54861405 MsG0880045141.01.T01:CDS
GTAGGTCTTAAGACTATGTA+TGG 0.485957 8:-54859623 MsG0880045141.01.T01:three_prime_UTR
CGCGTCTCGAACCGAACGGC+CGG 0.491628 8:+54864651 None:intergenic
CCAACGCAAGCGGTGGCTGC+CGG 0.505864 8:-54864602 MsG0880045141.01.T01:CDS
GAGTCTCTGAAACGTCGAAA+CGG 0.519182 8:+54864559 None:intergenic
AGTGTAAGCTGTTTCCCTCT+CGG 0.528417 8:+54862417 None:intergenic
CTGTTTCCCTCTCGGCTGAA+AGG 0.528840 8:+54862425 None:intergenic
AGCTTCCAGGATATTGAAGC+TGG 0.537286 8:-54864674 MsG0880045141.01.T01:CDS
CGGCCGTTCGGTTCGAGACG+CGG 0.540976 8:-54864650 MsG0880045141.01.T01:CDS
TTCGGATTCGGTGATGTGGT+TGG 0.544162 8:+54864864 None:intergenic
TCCAGGATATTGAAGCTGGC+CGG 0.545584 8:-54864670 MsG0880045141.01.T01:CDS
AGAACAGCGTGCCCTTCTTG+TGG 0.549690 8:-54862057 MsG0880045141.01.T01:CDS
AAGACAACATATTGGGCAGT+TGG 0.551926 8:-54862922 MsG0880045141.01.T01:CDS
AGCTTCAGGTTTGCTTGGGT+AGG 0.552580 8:-54859641 MsG0880045141.01.T01:three_prime_UTR
ATCATTGAGGAAAGGGAGCA+AGG 0.557562 8:-54861398 MsG0880045141.01.T01:CDS
ATTCAATGAGGCAATCATTG+AGG 0.560547 8:-54861411 MsG0880045141.01.T01:CDS
ACCTTCTGGATTCCACAAGA+AGG 0.564781 8:+54862045 None:intergenic
CGCAACGCCTTTCAGCCGAG+AGG 0.571050 8:-54862432 MsG0880045141.01.T01:CDS
AAAGCAAGACCCAACGCAAG+CGG 0.572914 8:-54864612 MsG0880045141.01.T01:CDS
TGCATGGGAGTTCTCAATGT+TGG 0.577781 8:+54861172 None:intergenic
ATGAGGCAATCATTGAGGAA+AGG 0.583047 8:-54861406 MsG0880045141.01.T01:CDS
ACATATTGGGCAGTTGGTGA+AGG 0.585467 8:-54862916 MsG0880045141.01.T01:CDS
CCCTTCTTGTGGAATCCAGA+AGG 0.586067 8:-54862046 MsG0880045141.01.T01:intron
GCAACGCCTTTCAGCCGAGA+GGG 0.592602 8:-54862431 MsG0880045141.01.T01:CDS
AGACGCGGCGGACCGATCAA+CGG 0.600554 8:-54864635 MsG0880045141.01.T01:CDS
GCAGATTTCAGTGCATGATG+TGG 0.601693 8:-54859925 MsG0880045141.01.T01:three_prime_UTR
CAGATTTCAGTGCATGATGT+GGG 0.604262 8:-54859924 MsG0880045141.01.T01:three_prime_UTR
TCAATTCTCCTACGTTGACG+TGG 0.607102 8:+54864914 None:intergenic
GCTGTGCTTGTCCATGAACA+AGG 0.607400 8:-54861320 MsG0880045141.01.T01:CDS
CCTTCTGGATTCCACAAGAA+GGG 0.608055 8:+54862046 None:intergenic
AGTGTTGAAAGAGTTTCAGA+AGG 0.608769 8:-54862455 MsG0880045141.01.T01:CDS
GCAAGACCCAACGCAAGCGG+TGG 0.613262 8:-54864609 MsG0880045141.01.T01:CDS
GAATATATGCATTAGTACCA+TGG 0.613477 8:+54860033 None:intergenic
GTCTAAACTTACATTAACAT+CGG 0.614459 8:+54862848 None:intergenic
AAGCTCAGGGGTATCTTTGG+GGG 0.617180 8:+54864520 None:intergenic
CTTAAGTGACAACATCAACA+AGG 0.623523 8:+54859988 None:intergenic
CTCGAAGGAAGAACTGCTTG+TGG 0.627768 8:+54862385 None:intergenic
AACTTACATTAACATCGGCA+TGG 0.628855 8:+54862853 None:intergenic
AAGATTCGGATTCGGTGATG+TGG 0.630677 8:+54864860 None:intergenic
CCGCCGCGTCTCGAACCGAA+CGG 0.635407 8:+54864647 None:intergenic
TTATTCATGCTACAGGCAGG+AGG 0.657704 8:-54861459 MsG0880045141.01.T01:intron
TGATTGATAAATCACCTCGA+AGG 0.669232 8:+54862370 None:intergenic
TCAAATGTCCACGTCAACGT+AGG 0.671078 8:-54864922 None:intergenic
TAATGAGATTGCATTCAATG+AGG 0.677503 8:-54861423 MsG0880045141.01.T01:CDS
CGATTCTATCAATTCCACCA+TGG 0.683706 8:-54860050 MsG0880045141.01.T01:three_prime_UTR
TATATGCATTAGTACCATGG+TGG 0.696255 8:+54860036 None:intergenic
TTAAGTGACAACATCAACAA+GGG 0.716744 8:+54859989 None:intergenic
TCTCTGAAACGTCGAAACGG+CGG 0.722781 8:+54864562 None:intergenic
CCGTTCGGTTCGAGACGCGG+CGG 0.734218 8:-54864647 MsG0880045141.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATCTTAATTGAAATTTAT+CGG - Chr8:54860990-54861009 MsG0880045141.01.T01:intron 10.0%
!!! CCAAATTAAAATTTTAAAAT+GGG + Chr8:54861450-54861469 None:intergenic 10.0%
!!! TCCAAATTAAAATTTTAAAA+TGG + Chr8:54861451-54861470 None:intergenic 10.0%
!! AAATAATAGTATTACTTATC+TGG - Chr8:54862669-54862688 MsG0880045141.01.T01:intron 15.0%
!! AAATATAAAAATTCATGTCA+TGG + Chr8:54863465-54863484 None:intergenic 15.0%
!! ACAAAATCAAAATAAAAAAC+AGG + Chr8:54860044-54860063 None:intergenic 15.0%
!! TATCTTAATTGAAATTTATC+GGG - Chr8:54860991-54861010 MsG0880045141.01.T01:intron 15.0%
!! TATTTGTGAATTTAAGTAAA+GGG + Chr8:54861311-54861330 None:intergenic 15.0%
!! TCAATTAAGATATAACAAAA+GGG + Chr8:54860983-54861002 None:intergenic 15.0%
!! TTCAATTAAGATATAACAAA+AGG + Chr8:54860984-54861003 None:intergenic 15.0%
!!! AATTAAAATTTTAAAATGGG+AGG + Chr8:54861447-54861466 None:intergenic 15.0%
!!! ATATATTTTGTAGATGATAT+TGG - Chr8:54863292-54863311 MsG0880045141.01.T01:intron 15.0%
!!! ATATCCAACTTAAATTTTTT+AGG + Chr8:54862582-54862601 None:intergenic 15.0%
!!! ATGACATGAATTTTTATATT+TGG - Chr8:54863464-54863483 MsG0880045141.01.T01:intron 15.0%
!!! ATTAAAATTTTAAAATGGGA+GGG + Chr8:54861446-54861465 None:intergenic 15.0%
!!! CAAATTTTAAAAAAATCGAT+AGG + Chr8:54862788-54862807 None:intergenic 15.0%
!!! CCCATTTTAAAATTTTAATT+TGG - Chr8:54861447-54861466 MsG0880045141.01.T01:CDS 15.0%
!!! TATCCAACTTAAATTTTTTA+GGG + Chr8:54862581-54862600 None:intergenic 15.0%
!!! TATGTATTTGAAATTTGATT+CGG - Chr8:54860163-54860182 MsG0880045141.01.T01:intron 15.0%
!!! TATTGTATATTTTGTATCTT+CGG - Chr8:54861919-54861938 MsG0880045141.01.T01:intron 15.0%
!!! TCATTTTTTCAAATTATTAC+TGG - Chr8:54860670-54860689 MsG0880045141.01.T01:intron 15.0%
!!! TGACATGAATTTTTATATTT+GGG - Chr8:54863465-54863484 MsG0880045141.01.T01:intron 15.0%
!!! TTTTTATTTTGATTTTGTTG+TGG - Chr8:54860046-54860065 MsG0880045141.01.T01:three_prime_UTR 15.0%
!! AAATAAGGTAAAAGACATTA+AGG + Chr8:54861954-54861973 None:intergenic 20.0%
!! AATGAAAAATGTATTACAAG+AGG + Chr8:54864177-54864196 None:intergenic 20.0%
!! ACAAAATCACAATATACTTA+AGG + Chr8:54864596-54864615 None:intergenic 20.0%
!! AGAAAAGAAAAAACGATTAT+TGG + Chr8:54859695-54859714 None:intergenic 20.0%
!! ATTTGTGAATTTAAGTAAAG+GGG + Chr8:54861310-54861329 None:intergenic 20.0%
!! CAAAATCACAATATACTTAA+GGG + Chr8:54864595-54864614 None:intergenic 20.0%
!! GAAAAGAAAAAACGATTATT+GGG + Chr8:54859694-54859713 None:intergenic 20.0%
!! GTATTTGTGAATTTAAGTAA+AGG + Chr8:54861312-54861331 None:intergenic 20.0%
!! TCATAAAGTGATAAAACAAT+AGG + Chr8:54863702-54863721 None:intergenic 20.0%
!! TTAATTTAAATAGTCTGTGA+GGG - Chr8:54860925-54860944 MsG0880045141.01.T01:intron 20.0%
!! TTTCTCTGTTCATATTTATT+CGG - Chr8:54864217-54864236 MsG0880045141.01.T01:intron 20.0%
!!! AAATAATGCAATTTGTTGAA+TGG + Chr8:54862992-54863011 None:intergenic 20.0%
!!! AAATCAATCGTCTTTTTATT+CGG + Chr8:54863542-54863561 None:intergenic 20.0%
!!! AATTGGAAGAAAAACTTTTA+TGG + Chr8:54862836-54862855 None:intergenic 20.0%
!!! AGTATATTGTGATTTTGTTA+TGG - Chr8:54864598-54864617 MsG0880045141.01.T01:CDS 20.0%
!!! GTACTATTTTTGATAATTTG+TGG - Chr8:54864901-54864920 MsG0880045141.01.T01:five_prime_UTR 20.0%
!!! GTATATTGTGATTTTGTTAT+GGG - Chr8:54864599-54864618 MsG0880045141.01.T01:CDS 20.0%
!!! TATATTGTGATTTTGTTATG+GGG - Chr8:54864600-54864619 MsG0880045141.01.T01:CDS 20.0%
!!! TATTTTTGATAATTTGTGGA+AGG - Chr8:54864905-54864924 MsG0880045141.01.T01:five_prime_UTR 20.0%
!!! TGTAAACTTTTTTATCTGTA+AGG - Chr8:54860503-54860522 MsG0880045141.01.T01:intron 20.0%
!!! TTAAAATTTTAAAATGGGAG+GGG + Chr8:54861445-54861464 None:intergenic 20.0%
!!! TTAAACAAGATTTTCAAAAC+AGG + Chr8:54860808-54860827 None:intergenic 20.0%
!!! TTTTTTTTTTCCTGTTCTTA+AGG - Chr8:54864347-54864366 MsG0880045141.01.T01:intron 20.0%
! AAGAAATAAGTTACCAATCA+TGG + Chr8:54863197-54863216 None:intergenic 25.0%
! ACAAAGATCAAATTCATCTT+TGG - Chr8:54863384-54863403 MsG0880045141.01.T01:intron 25.0%
! AGTGAAATCATTAATCAAGA+TGG + Chr8:54864272-54864291 None:intergenic 25.0%
! ATTGTGAGGTAATGTTAAAT+TGG + Chr8:54862853-54862872 None:intergenic 25.0%
! ATTGTGGAATTCTACTTTAT+AGG - Chr8:54860192-54860211 MsG0880045141.01.T01:intron 25.0%
! CACAAATAAAAAAACAACCT+TGG + Chr8:54861032-54861051 None:intergenic 25.0%
! GAAAGAAGAAAATGAAGATT+CGG + Chr8:54859646-54859665 None:intergenic 25.0%
! GATTTAAATTGCAAGTTTGA+TGG - Chr8:54860302-54860321 MsG0880045141.01.T01:intron 25.0%
! GTCTAAACTTACATTAACAT+CGG + Chr8:54861644-54861663 None:intergenic 25.0%
! GTTAATTTAAATAGTCTGTG+AGG - Chr8:54860924-54860943 MsG0880045141.01.T01:intron 25.0%
! TAATATGAGAAATAACCTTC+TGG + Chr8:54862461-54862480 None:intergenic 25.0%
! TAGAGAATTATAGATGAGTT+GGG - Chr8:54860359-54860378 MsG0880045141.01.T01:intron 25.0%
! TGATATATGGCACAAAATAA+AGG + Chr8:54861666-54861685 None:intergenic 25.0%
! TTAGAGAATTATAGATGAGT+TGG - Chr8:54860358-54860377 MsG0880045141.01.T01:intron 25.0%
! TTATGGTAAATAACTGACAT+CGG + Chr8:54862819-54862838 None:intergenic 25.0%
! TTCTCTGTTCATATTTATTC+GGG - Chr8:54864218-54864237 MsG0880045141.01.T01:intron 25.0%
!! ATTGATCTGTTTGTTAGTTT+CGG - Chr8:54864084-54864103 MsG0880045141.01.T01:intron 25.0%
!! CTCTGTTCATATATATTTTG+TGG - Chr8:54862894-54862913 MsG0880045141.01.T01:CDS 25.0%
!! GAATTCTACTTTATAGGTTT+TGG - Chr8:54860198-54860217 MsG0880045141.01.T01:intron 25.0%
!! TGTTTCTGATAAGAAAGTAA+AGG - Chr8:54862530-54862549 MsG0880045141.01.T01:intron 25.0%
!! TTATTTTCTGTACTTGTTCA+TGG - Chr8:54863253-54863272 MsG0880045141.01.T01:intron 25.0%
!! TTCAACTTTTCATGTTAACA+AGG + Chr8:54863597-54863616 None:intergenic 25.0%
!!! GATTTTTTGAATGTGGTTTT+AGG - Chr8:54860407-54860426 MsG0880045141.01.T01:intron 25.0%
!!! TAAAATTTTAAAATGGGAGG+GGG + Chr8:54861444-54861463 None:intergenic 25.0%
!!! TATAGGTTTTGGAATTGTAA+AGG - Chr8:54860209-54860228 MsG0880045141.01.T01:intron 25.0%
!!! TTTGATTCGGTTAATTATTG+TGG - Chr8:54860176-54860195 MsG0880045141.01.T01:intron 25.0%
AAATCAATGTCTTGCTGAAA+AGG + Chr8:54864779-54864798 None:intergenic 30.0%
AAATTGCAAGTTTGATGGAA+TGG - Chr8:54860307-54860326 MsG0880045141.01.T01:intron 30.0%
AATTGGAAGGAATTGAATGT+TGG - Chr8:54860280-54860299 MsG0880045141.01.T01:intron 30.0%
ACAAGAACAATCAAAGTGAT+AGG + Chr8:54864246-54864265 None:intergenic 30.0%
ACAAGACAAGACAACATATT+GGG - Chr8:54861560-54861579 MsG0880045141.01.T01:intron 30.0%
AGAAAATGAAGATTCGGATT+CGG + Chr8:54859640-54859659 None:intergenic 30.0%
AGAGAATTATAGATGAGTTG+GGG - Chr8:54860360-54860379 MsG0880045141.01.T01:intron 30.0%
ATAAAATGTCAACTGCTGAT+TGG - Chr8:54861378-54861397 MsG0880045141.01.T01:CDS 30.0%
ATAGTTGTAGGTAATTGGAA+TGG - Chr8:54863645-54863664 MsG0880045141.01.T01:intron 30.0%
ATTAGAGTTCCTAAAAGAGA+AGG - Chr8:54862144-54862163 MsG0880045141.01.T01:intron 30.0%
CCTCCCTAAAAAATTTAAGT+TGG - Chr8:54862575-54862594 MsG0880045141.01.T01:intron 30.0%
GAATATATGCATTAGTACCA+TGG + Chr8:54864459-54864478 None:intergenic 30.0%
GACGCAAAAAATGTTAAATG+AGG + Chr8:54861090-54861109 None:intergenic 30.0%
GAGAGGGATTATTTATTTGT+TGG - Chr8:54863767-54863786 MsG0880045141.01.T01:intron 30.0%
GTAAAAGACATTAAGGTCAT+AGG + Chr8:54861947-54861966 None:intergenic 30.0%
TAAATAATCCCTCTCTCAAA+AGG + Chr8:54863762-54863781 None:intergenic 30.0%
TAATGAGATTGCATTCAATG+AGG - Chr8:54863066-54863085 MsG0880045141.01.T01:intron 30.0%
TCTTTGATTATTCATGCTAC+AGG - Chr8:54863023-54863042 MsG0880045141.01.T01:intron 30.0%
TGTTATGTTCTCTCTTATGT+TGG - Chr8:54864623-54864642 MsG0880045141.01.T01:CDS 30.0%
TTAAGTGACAACATCAACAA+GGG + Chr8:54864503-54864522 None:intergenic 30.0%
TTAGAGTTCCTAAAAGAGAA+GGG - Chr8:54862145-54862164 MsG0880045141.01.T01:intron 30.0%
! AACAGAGAAATAACAGCTTT+TGG + Chr8:54862881-54862900 None:intergenic 30.0%
! CTAATTTTCTCGAGAAAGTT+TGG - Chr8:54859744-54859763 MsG0880045141.01.T01:three_prime_UTR 30.0%
! GGTGTTACATTTACAAGTAA+AGG + Chr8:54864737-54864756 None:intergenic 30.0%
! TAAAATGTCAACTGCTGATT+GGG - Chr8:54861379-54861398 MsG0880045141.01.T01:CDS 30.0%
! TAGATTTTCTACCATCTTCT+AGG - Chr8:54863860-54863879 MsG0880045141.01.T01:intron 30.0%
! TATTGGGATCTGTGATTTTA+GGG + Chr8:54859678-54859697 None:intergenic 30.0%
! TCTTGTTTAAGTTACTGAAC+TGG - Chr8:54860818-54860837 MsG0880045141.01.T01:intron 30.0%
! TTATTGGGATCTGTGATTTT+AGG + Chr8:54859679-54859698 None:intergenic 30.0%
! TTGATCTGTTTGTTAGTTTC+GGG - Chr8:54864085-54864104 MsG0880045141.01.T01:intron 30.0%
! TTGGGATTTAAGGTTAATGT+TGG - Chr8:54860334-54860353 MsG0880045141.01.T01:intron 30.0%
!! ACTATTTTACCTTTTGAGAG+AGG - Chr8:54863750-54863769 MsG0880045141.01.T01:intron 30.0%
!! CTATTTTACCTTTTGAGAGA+GGG - Chr8:54863751-54863770 MsG0880045141.01.T01:intron 30.0%
!! GAAGTTTTCAAATCTGAAAC+AGG - Chr8:54861254-54861273 MsG0880045141.01.T01:intron 30.0%
!! GGAAACTGATAACTTTTTCT+TGG - Chr8:54861400-54861419 MsG0880045141.01.T01:CDS 30.0%
!! TTTTTATATTTGGGACCATG+AGG - Chr8:54863474-54863493 MsG0880045141.01.T01:intron 30.0%
!!! AAAATTTTAAAATGGGAGGG+GGG + Chr8:54861443-54861462 None:intergenic 30.0%
!!! CCAACTTAAATTTTTTAGGG+AGG + Chr8:54862578-54862597 None:intergenic 30.0%
!!! GAGTTGAGATTTTTTGAATG+TGG - Chr8:54860400-54860419 MsG0880045141.01.T01:intron 30.0%
!!! TAGTTATTTTGAGTTTGGTG+TGG - Chr8:54860851-54860870 MsG0880045141.01.T01:intron 30.0%
!!! TGGGTTAGTTATTTTGAGTT+TGG - Chr8:54860846-54860865 MsG0880045141.01.T01:intron 30.0%
!!! TTAAATTTTTTAGGGAGGCA+GGG + Chr8:54862573-54862592 None:intergenic 30.0%
AAAATTCATGTCATGGAAGC+AGG + Chr8:54863458-54863477 None:intergenic 35.0%
AACTTACATTAACATCGGCA+TGG + Chr8:54861639-54861658 None:intergenic 35.0%
AAGTTACTGAACTGGTGAAA+TGG - Chr8:54860826-54860845 MsG0880045141.01.T01:intron 35.0%
ACACAAAAAGTGGAAGATCT+CGG + Chr8:54860607-54860626 None:intergenic 35.0%
ACAGCTAGTGAAATGGATAT+TGG - Chr8:54862394-54862413 MsG0880045141.01.T01:CDS 35.0%
ACGATTATCTGTTTGACAGA+GGG + Chr8:54861846-54861865 None:intergenic 35.0%
AGTTACTGAACTGGTGAAAT+GGG - Chr8:54860827-54860846 MsG0880045141.01.T01:intron 35.0%
AGTTGGGGTTTAGAGAATTA+TGG - Chr8:54860375-54860394 MsG0880045141.01.T01:intron 35.0%
AGTTTGATGGAATGGTGATT+TGG - Chr8:54860315-54860334 MsG0880045141.01.T01:intron 35.0%
AGTTTGGATCATCGAATTGT+AGG - Chr8:54859760-54859779 MsG0880045141.01.T01:three_prime_UTR 35.0%
ATATATCATCTGCATGTGCA+GGG - Chr8:54861678-54861697 MsG0880045141.01.T01:intron 35.0%
ATCTTAGAATAGACCTACTC+AGG + Chr8:54863505-54863524 None:intergenic 35.0%
ATTCAATGAGGCAATCATTG+AGG - Chr8:54863078-54863097 MsG0880045141.01.T01:intron 35.0%
ATTTAAATAGTCTGTGAGGG+AGG - Chr8:54860928-54860947 MsG0880045141.01.T01:intron 35.0%
CAAGAAATACAGCAGCAAAT+TGG - Chr8:54863118-54863137 MsG0880045141.01.T01:intron 35.0%
CACAAGACAAGACAACATAT+TGG - Chr8:54861559-54861578 MsG0880045141.01.T01:intron 35.0%
CATGTGCAGGGTAATTTATA+TGG - Chr8:54861690-54861709 MsG0880045141.01.T01:intron 35.0%
CCAAAAAGAACAACAGAATG+TGG + Chr8:54862735-54862754 None:intergenic 35.0%
CGTGCTTAGATAAATATAGC+TGG - Chr8:54863676-54863695 MsG0880045141.01.T01:intron 35.0%
CTACAAACTCACACAAAAAG+TGG + Chr8:54860617-54860636 None:intergenic 35.0%
CTTAAGTGACAACATCAACA+AGG + Chr8:54864504-54864523 None:intergenic 35.0%
GATATCTAGCCTAACAATGT+CGG + Chr8:54860548-54860567 None:intergenic 35.0%
GATTGAGCTCAATTGGATTT+GGG - Chr8:54860068-54860087 MsG0880045141.01.T01:exon 35.0%
GCATGAATAATCAAAGAGTC+AGG + Chr8:54863020-54863039 None:intergenic 35.0%
GGTTCATAGTTGTAGGTAAT+TGG - Chr8:54863640-54863659 MsG0880045141.01.T01:intron 35.0%
GGTTTCATCAAATGGAACTT+GGG - Chr8:54861208-54861227 MsG0880045141.01.T01:intron 35.0%
GTAGGTCTTAAGACTATGTA+TGG - Chr8:54864866-54864885 MsG0880045141.01.T01:five_prime_UTR 35.0%
GTTTGATGGAATGGTGATTT+GGG - Chr8:54860316-54860335 MsG0880045141.01.T01:intron 35.0%
TACTGTAAAATGAAACTCGC+TGG - Chr8:54861329-54861348 MsG0880045141.01.T01:CDS 35.0%
TAGAGTTCCTAAAAGAGAAG+GGG - Chr8:54862146-54862165 MsG0880045141.01.T01:intron 35.0%
TAGGATACGGTAACATCATT+TGG - Chr8:54863879-54863898 MsG0880045141.01.T01:intron 35.0%
TATATGCATTAGTACCATGG+TGG + Chr8:54864456-54864475 None:intergenic 35.0%
TATGCGTAAAACTTACATGG+CGG + Chr8:54861504-54861523 None:intergenic 35.0%
TATTGCTTATGCAATGACCA+AGG - Chr8:54861169-54861188 MsG0880045141.01.T01:CDS 35.0%
TGATTGATAAATCACCTCGA+AGG + Chr8:54862122-54862141 None:intergenic 35.0%
TGGTTTCATCAAATGGAACT+TGG - Chr8:54861207-54861226 MsG0880045141.01.T01:intron 35.0%
TGTAAAGGAGAGAGAGAATT+GGG - Chr8:54860224-54860243 MsG0880045141.01.T01:intron 35.0%
TGTTCTATAATCTGTGTCCA+TGG - Chr8:54863619-54863638 MsG0880045141.01.T01:intron 35.0%
TTACCTACAACTATGAACCA+TGG + Chr8:54863639-54863658 None:intergenic 35.0%
TTGTAAAGGAGAGAGAGAAT+TGG - Chr8:54860223-54860242 MsG0880045141.01.T01:intron 35.0%
TTTAAATAGTCTGTGAGGGA+GGG - Chr8:54860929-54860948 MsG0880045141.01.T01:intron 35.0%
TTTCCAAAACTGAAAGCTTC+AGG - Chr8:54864834-54864853 MsG0880045141.01.T01:five_prime_UTR 35.0%
! AAACCTGAAGCTTTCAGTTT+TGG + Chr8:54864840-54864859 None:intergenic 35.0%
! ACCTTATTTCTTGTGTTTCC+AGG - Chr8:54861965-54861984 MsG0880045141.01.T01:intron 35.0%
! AGAACAACAGAATGTGGTTT+TGG + Chr8:54862729-54862748 None:intergenic 35.0%
! AGTGTTGAAAGAGTTTCAGA+AGG - Chr8:54862034-54862053 MsG0880045141.01.T01:intron 35.0%
! ATAGGTCCTAAGGAACTTTT+TGG - Chr8:54860732-54860751 MsG0880045141.01.T01:intron 35.0%
! CACGCAATGGTTTTTAACAT+GGG - Chr8:54862347-54862366 MsG0880045141.01.T01:intron 35.0%
! CCACATTCTGTTGTTCTTTT+TGG - Chr8:54862732-54862751 MsG0880045141.01.T01:intron 35.0%
! CTTTTTGTGTGAGTTTGTAG+TGG - Chr8:54860617-54860636 MsG0880045141.01.T01:intron 35.0%
! GAATGGTGATTTGGGATTTA+AGG - Chr8:54860324-54860343 MsG0880045141.01.T01:intron 35.0%
! GCACACTGATGTGTAATTTT+AGG - Chr8:54862644-54862663 MsG0880045141.01.T01:intron 35.0%
! TAGGTCCTAAGGAACTTTTT+GGG - Chr8:54860733-54860752 MsG0880045141.01.T01:intron 35.0%
! TCTCTCTTATGTTGGTGTTT+GGG - Chr8:54864631-54864650 MsG0880045141.01.T01:CDS 35.0%
! TGGTAGATGATGATGAAAAG+TGG - Chr8:54860094-54860113 MsG0880045141.01.T01:CDS 35.0%
! TGTTGATGTTGTCACTTAAG+TGG - Chr8:54864504-54864523 MsG0880045141.01.T01:intron 35.0%
! TTAACATGGGCTTTTCTTTC+TGG - Chr8:54862360-54862379 MsG0880045141.01.T01:intron 35.0%
! TTCTCTCTTATGTTGGTGTT+TGG - Chr8:54864630-54864649 MsG0880045141.01.T01:CDS 35.0%
! TTCTTTTCTCTCTCTTTCTC+AGG - Chr8:54859706-54859725 MsG0880045141.01.T01:three_prime_UTR 35.0%
!! GCTTGCTTTTGGTCATATTT+GGG - Chr8:54864373-54864392 MsG0880045141.01.T01:intron 35.0%
!! GGTGTTGATCTGAAAAATTC+CGG + Chr8:54859909-54859928 None:intergenic 35.0%
!! TATTACTGGTGTTGATGTGT+CGG - Chr8:54860684-54860703 MsG0880045141.01.T01:intron 35.0%
!! TGATTGATGATGACGAAAGA+GGG - Chr8:54860247-54860266 MsG0880045141.01.T01:intron 35.0%
!! TGCTTGCTTTTGGTCATATT+TGG - Chr8:54864372-54864391 MsG0880045141.01.T01:intron 35.0%
!! TGTTCTTTTTGGCAGTTCAA+AGG - Chr8:54862743-54862762 MsG0880045141.01.T01:intron 35.0%
!! TTCTACCATCTTCTAGGATA+CGG - Chr8:54863866-54863885 MsG0880045141.01.T01:intron 35.0%
!!! AACTTTTTGGGTTTGGATGT+AGG - Chr8:54860745-54860764 MsG0880045141.01.T01:intron 35.0%
!!! ATTTTGAGTTTGGTGTGGTT+CGG - Chr8:54860856-54860875 MsG0880045141.01.T01:intron 35.0%
!!! CTTAAATTTTTTAGGGAGGC+AGG + Chr8:54862574-54862593 None:intergenic 35.0%
!!! TAAATTTTTTAGGGAGGCAG+GGG + Chr8:54862572-54862591 None:intergenic 35.0%
!!! TCTTTGTTTTGTAGACGAAG+TGG + Chr8:54860649-54860668 None:intergenic 35.0%
AACAATGTCGGTATTACCGA+TGG + Chr8:54860536-54860555 None:intergenic 40.0%
AACTGCTCACCAATCCAATT+CGG + Chr8:54860775-54860794 None:intergenic 40.0%
AAGACAACATATTGGGCAGT+TGG - Chr8:54861567-54861586 MsG0880045141.01.T01:intron 40.0%
AAGAGGGGATTAGGTGTAAT+TGG - Chr8:54860263-54860282 MsG0880045141.01.T01:intron 40.0%
AGAACTGCTTGTGGAACAAA+AGG + Chr8:54862098-54862117 None:intergenic 40.0%
AGCTGTAGTTTCCTACATAC+AGG - Chr8:54863829-54863848 MsG0880045141.01.T01:intron 40.0%
AGGATTTATGAGGTGTGAGA+AGG - Chr8:54864029-54864048 MsG0880045141.01.T01:intron 40.0%
ATGAGGCAATCATTGAGGAA+AGG - Chr8:54863083-54863102 MsG0880045141.01.T01:intron 40.0%
CAATCATGGTTCCTTGTTCA+TGG + Chr8:54863183-54863202 None:intergenic 40.0%
CACAAAAAGTGGAAGATCTC+GGG + Chr8:54860606-54860625 None:intergenic 40.0%
CAGATTTCAGTGCATGATGT+GGG - Chr8:54864565-54864584 MsG0880045141.01.T01:CDS 40.0%
CATATATCATCTGCATGTGC+AGG - Chr8:54861677-54861696 MsG0880045141.01.T01:intron 40.0%
CATGAACAAGGAACCATGAT+TGG - Chr8:54863181-54863200 MsG0880045141.01.T01:intron 40.0%
CATTTGATGAAACCACCAGA+GGG + Chr8:54861202-54861221 None:intergenic 40.0%
CCAAACCCAAAAAGTTCCTT+AGG + Chr8:54860741-54860760 None:intergenic 40.0%
CGATTATCTGTTTGACAGAG+GGG + Chr8:54861845-54861864 None:intergenic 40.0%
CGATTCTATCAATTCCACCA+TGG - Chr8:54864439-54864458 MsG0880045141.01.T01:intron 40.0%
CTACAACAACTCCTGTATGT+AGG + Chr8:54863843-54863862 None:intergenic 40.0%
CTGCACATGCAGATGATATA+TGG + Chr8:54861679-54861698 None:intergenic 40.0%
GACGATTATCTGTTTGACAG+AGG + Chr8:54861847-54861866 None:intergenic 40.0%
GCCTATGCGTAAAACTTACA+TGG + Chr8:54861507-54861526 None:intergenic 40.0%
GCCTGGAAACACAAGAAATA+AGG + Chr8:54861969-54861988 None:intergenic 40.0%
GGATTGAGCTCAATTGGATT+TGG - Chr8:54860067-54860086 MsG0880045141.01.T01:exon 40.0%
GGATTTATGAGGTGTGAGAA+GGG - Chr8:54864030-54864049 MsG0880045141.01.T01:intron 40.0%
GTAAAATGAAACTCGCTGGA+TGG - Chr8:54861333-54861352 MsG0880045141.01.T01:CDS 40.0%
GTGGAAAAAGGGTTTGTGAT+AGG - Chr8:54863923-54863942 MsG0880045141.01.T01:intron 40.0%
GTTAGGCTAGATATCTTCCT+TGG - Chr8:54860553-54860572 MsG0880045141.01.T01:intron 40.0%
TCAGAGAATTATGAGCTTCC+AGG - Chr8:54859802-54859821 MsG0880045141.01.T01:three_prime_UTR 40.0%
TCGGTAATACCGACATTGTT+AGG - Chr8:54860536-54860555 MsG0880045141.01.T01:intron 40.0%
TGAAAGCTCAGTTGCTACAT+AGG + Chr8:54862943-54862962 None:intergenic 40.0%
TGAGGCAATCATTGAGGAAA+GGG - Chr8:54863084-54863103 MsG0880045141.01.T01:intron 40.0%
TGATTATTCATGCTACAGGC+AGG - Chr8:54863027-54863046 MsG0880045141.01.T01:intron 40.0%
TGTCCATGGTTCATAGTTGT+AGG - Chr8:54863633-54863652 MsG0880045141.01.T01:intron 40.0%
TGTGCTTCTTTAGTCGCAAT+TGG - Chr8:54862292-54862311 MsG0880045141.01.T01:intron 40.0%
TGTTACCGTATCCTAGAAGA+TGG + Chr8:54863874-54863893 None:intergenic 40.0%
TTTACTGAGTCTCGGTTGAT+TGG - Chr8:54864530-54864549 MsG0880045141.01.T01:CDS 40.0%
! AGCTTTTGGCATCAATTGTG+AGG + Chr8:54862867-54862886 None:intergenic 40.0%
! AGTGGTGTTTTACTGAGTCT+CGG - Chr8:54864522-54864541 MsG0880045141.01.T01:CDS 40.0%
! CCTTTGAGCATTTTTGCTCT+GGG - Chr8:54864137-54864156 MsG0880045141.01.T01:intron 40.0%
! CTCTCTTATGTTGGTGTTTG+GGG - Chr8:54864632-54864651 MsG0880045141.01.T01:CDS 40.0%
! CTTTGAGCATTTTTGCTCTG+GGG - Chr8:54864138-54864157 MsG0880045141.01.T01:intron 40.0%
! GCACGCAATGGTTTTTAACA+TGG - Chr8:54862346-54862365 MsG0880045141.01.T01:intron 40.0%
! GCATAGGCTCTAACAATGTT+AGG - Chr8:54861519-54861538 MsG0880045141.01.T01:intron 40.0%
! GCCATGTAAGTTTTACGCAT+AGG - Chr8:54861503-54861522 MsG0880045141.01.T01:intron 40.0%
! GCTCAATTGGATTTGGGATT+TGG - Chr8:54860074-54860093 MsG0880045141.01.T01:exon 40.0%
! TCCTTTGAGCATTTTTGCTC+TGG - Chr8:54864136-54864155 MsG0880045141.01.T01:intron 40.0%
! TCTTAAGGCATGCTTGCTTT+TGG - Chr8:54864362-54864381 MsG0880045141.01.T01:intron 40.0%
! TGAAAGCTTCAGGTTTGCTT+GGG - Chr8:54864844-54864863 MsG0880045141.01.T01:five_prime_UTR 40.0%
! TGTTGTGGATTGAGCTCAAT+TGG - Chr8:54860061-54860080 MsG0880045141.01.T01:exon 40.0%
! TTGGTTTCGCGTTTTTCTTG+TGG + Chr8:54859609-54859628 None:intergenic 40.0%
!! GATTGATGATGACGAAAGAG+GGG - Chr8:54860248-54860267 MsG0880045141.01.T01:intron 40.0%
!! GGTTGTTGTTTAGTGAACCA+AGG - Chr8:54861012-54861031 MsG0880045141.01.T01:intron 40.0%
!! GTCACTAGCTTGTTTAAGCT+TGG + Chr8:54861608-54861627 None:intergenic 40.0%
!! GTGATTGATGATGACGAAAG+AGG - Chr8:54860246-54860265 MsG0880045141.01.T01:intron 40.0%
!! GTGATTTTGATGATTGTGCG+TGG - Chr8:54860116-54860135 MsG0880045141.01.T01:CDS 40.0%
!! TCTTTTTGGCAGTTCAAAGG+AGG - Chr8:54862746-54862765 MsG0880045141.01.T01:intron 40.0%
!! TGTTGGTGTTTGGGGTTTTA+AGG - Chr8:54864640-54864659 MsG0880045141.01.T01:CDS 40.0%
!!! AAATTTTTTAGGGAGGCAGG+GGG + Chr8:54862571-54862590 None:intergenic 40.0%
!!! CCTAAGGAACTTTTTGGGTT+TGG - Chr8:54860738-54860757 MsG0880045141.01.T01:intron 40.0%
!!! GTTTATTTTGCCTGTCCAGT+TGG + Chr8:54861141-54861160 None:intergenic 40.0%
AATATAGCCACTCCACTTGG+TGG - Chr8:54863904-54863923 MsG0880045141.01.T01:intron 45.0%
ACCTTCTGGATTCCACAAGA+AGG + Chr8:54862447-54862466 None:intergenic 45.0%
AGAGAAAAGCCCAAAGTGAG+AGG - Chr8:54863954-54863973 MsG0880045141.01.T01:intron 45.0%
AGCAAGCATGCCTTAAGAAC+AGG + Chr8:54864360-54864379 None:intergenic 45.0%
AGCTTCCAGGATATTGAAGC+TGG - Chr8:54859815-54859834 MsG0880045141.01.T01:three_prime_UTR 45.0%
ATCATTGAGGAAAGGGAGCA+AGG - Chr8:54863091-54863110 MsG0880045141.01.T01:intron 45.0%
CAGAGACTCGTTAATACCCT+TGG - Chr8:54859944-54859963 MsG0880045141.01.T01:three_prime_UTR 45.0%
CAGCTACACAGCTAGTGAAA+TGG - Chr8:54862387-54862406 MsG0880045141.01.T01:CDS 45.0%
CCATTTGATGAAACCACCAG+AGG + Chr8:54861203-54861222 None:intergenic 45.0%
CCCAGAGCAAAAATGCTCAA+AGG + Chr8:54864140-54864159 None:intergenic 45.0%
CCTCTGGTGGTTTCATCAAA+TGG - Chr8:54861200-54861219 MsG0880045141.01.T01:intron 45.0%
CCTTCTGGATTCCACAAGAA+GGG + Chr8:54862446-54862465 None:intergenic 45.0%
GATTGTGCGTGGTTTATAGC+TGG - Chr8:54860127-54860146 MsG0880045141.01.T01:intron 45.0%
GCAGATTTCAGTGCATGATG+TGG - Chr8:54864564-54864583 MsG0880045141.01.T01:CDS 45.0%
GGGGATTAGGTGTAATTGGA+AGG - Chr8:54860267-54860286 MsG0880045141.01.T01:intron 45.0%
GTCAATATAGCCACTCCACT+TGG - Chr8:54863901-54863920 MsG0880045141.01.T01:intron 45.0%
TGAGGTGTGAGAAGGGAATT+CGG - Chr8:54864037-54864056 MsG0880045141.01.T01:intron 45.0%
TGCATGAGTGCAAGGATAGA+AGG - Chr8:54861055-54861074 MsG0880045141.01.T01:intron 45.0%
TGCATGGGAGTTCTCAATGT+TGG + Chr8:54863320-54863339 None:intergenic 45.0%
TTATTCATGCTACAGGCAGG+AGG - Chr8:54863030-54863049 MsG0880045141.01.T01:intron 45.0%
TTGTGCAATGCATGAGTGCA+AGG - Chr8:54861047-54861066 MsG0880045141.01.T01:intron 45.0%
! AACAGCTTTTCACGAAGCTC+AGG + Chr8:54859986-54860005 None:intergenic 45.0%
! AAGCTTGCCCCTTCTCTTTT+AGG + Chr8:54862156-54862175 None:intergenic 45.0%
! ACAGCTTTTCACGAAGCTCA+GGG + Chr8:54859985-54860004 None:intergenic 45.0%
! AGTGTAAGCTGTTTCCCTCT+CGG + Chr8:54862075-54862094 None:intergenic 45.0%
! CAAACCCTTTTTCCACCAAG+TGG + Chr8:54863919-54863938 None:intergenic 45.0%
! CACTCCACTTGGTGGAAAAA+GGG - Chr8:54863912-54863931 MsG0880045141.01.T01:intron 45.0%
! CTGAAAGCTTCAGGTTTGCT+TGG - Chr8:54864843-54864862 MsG0880045141.01.T01:five_prime_UTR 45.0%
! GTAGGTTAGCCGAATTGGAT+TGG - Chr8:54860763-54860782 MsG0880045141.01.T01:intron 45.0%
! GTTTCGCGTTTTTCTTGTGG+TGG + Chr8:54859606-54859625 None:intergenic 45.0%
! TCGGTGTCTATTCTGTGAGT+CGG - Chr8:54860703-54860722 MsG0880045141.01.T01:intron 45.0%
! TGATGACGAAAGAGGGGATT+AGG - Chr8:54860254-54860273 MsG0880045141.01.T01:intron 45.0%
! TGGATGTAGGTTAGCCGAAT+TGG - Chr8:54860758-54860777 MsG0880045141.01.T01:intron 45.0%
! TTGATGACTTCTGCACGCAA+TGG - Chr8:54862334-54862353 MsG0880045141.01.T01:intron 45.0%
!! AAGATTCGGATTCGGTGATG+TGG + Chr8:54859632-54859651 None:intergenic 45.0%
!! ACATATTGGGCAGTTGGTGA+AGG - Chr8:54861573-54861592 MsG0880045141.01.T01:intron 45.0%
!! AGATATCTTCCTTGGTGTCC+TGG - Chr8:54860561-54860580 MsG0880045141.01.T01:intron 45.0%
!! GAGTCTCTGAAACGTCGAAA+CGG + Chr8:54859933-54859952 None:intergenic 45.0%
!! GATATCTTCCTTGGTGTCCT+GGG - Chr8:54860562-54860581 MsG0880045141.01.T01:intron 45.0%
!!! ATTTTAAAATGGGAGGGGGG+TGG + Chr8:54861440-54861459 None:intergenic 45.0%
!!! CATTTTTGCTCTGGGGTTAC+AGG - Chr8:54864145-54864164 MsG0880045141.01.T01:intron 45.0%
!!! CTTACATGGCGGTTTTGTTG+TGG + Chr8:54861493-54861512 None:intergenic 45.0%
!!! TTTTAAAATGGGAGGGGGGT+GGG + Chr8:54861439-54861458 None:intergenic 45.0%
AAAGAGAAGGGGCAAGCTTG+TGG - Chr8:54862157-54862176 MsG0880045141.01.T01:intron 50.0%
AAAGCAAGACCCAACGCAAG+CGG - Chr8:54859877-54859896 MsG0880045141.01.T01:three_prime_UTR 50.0%
ACCAGCTCACCTCTCACTTT+GGG + Chr8:54863966-54863985 None:intergenic 50.0%
AGCCACATGACCAGAAACAG+AGG + Chr8:54862187-54862206 None:intergenic 50.0%
AGGTGTGAGAAGGGAATTCG+GGG - Chr8:54864039-54864058 MsG0880045141.01.T01:intron 50.0%
ATCAACCACTACCCCTGCAA+GGG + Chr8:54863796-54863815 None:intergenic 50.0%
CACAAGCAGTTCTTCCTTCG+AGG - Chr8:54862105-54862124 MsG0880045141.01.T01:intron 50.0%
CCCTTCTTGTGGAATCCAGA+AGG - Chr8:54862443-54862462 MsG0880045141.01.T01:CDS 50.0%
CGCATGTGTCAGTGTGATGT+CGG + Chr8:54860469-54860488 None:intergenic 50.0%
CTCGAAGGAAGAACTGCTTG+TGG + Chr8:54862107-54862126 None:intergenic 50.0%
GAGGTGTGAGAAGGGAATTC+GGG - Chr8:54864038-54864057 MsG0880045141.01.T01:intron 50.0%
GCCACATGACCAGAAACAGA+GGG + Chr8:54862186-54862205 None:intergenic 50.0%
GCTGTGCTTGTCCATGAACA+AGG - Chr8:54863169-54863188 MsG0880045141.01.T01:intron 50.0%
GGAGTCAGCACTGCGAATTT+CGG + Chr8:54864758-54864777 None:intergenic 50.0%
GGGTCTTGCTTTCCGTTGAT+CGG + Chr8:54859869-54859888 None:intergenic 50.0%
TACCAGCTCACCTCTCACTT+TGG + Chr8:54863967-54863986 None:intergenic 50.0%
TCAAACCCAAGCACAAACCC+AGG + Chr8:54860582-54860601 None:intergenic 50.0%
TCCAGGATATTGAAGCTGGC+CGG - Chr8:54859819-54859838 MsG0880045141.01.T01:three_prime_UTR 50.0%
TCGGTATTACCGATGGTGCT+AGG + Chr8:54860529-54860548 None:intergenic 50.0%
TCTGTAAGGCCTAGCACCAT+CGG - Chr8:54860517-54860536 MsG0880045141.01.T01:intron 50.0%
TGAAACCACCAGAGGGAAGA+AGG + Chr8:54861195-54861214 None:intergenic 50.0%
TGAGAGGTGAGCTGGTAAGT+TGG - Chr8:54863970-54863989 MsG0880045141.01.T01:intron 50.0%
TGCTTGTGCAGTTGCTGCAT+GGG + Chr8:54863335-54863354 None:intergenic 50.0%
TTGCTTGTGCAGTTGCTGCA+TGG + Chr8:54863336-54863355 None:intergenic 50.0%
TTGTGGTGTCCCTCTGTTTC+TGG - Chr8:54862174-54862193 MsG0880045141.01.T01:intron 50.0%
! AGCTTCAGGTTTGCTTGGGT+AGG - Chr8:54864848-54864867 MsG0880045141.01.T01:five_prime_UTR 50.0%
! ATTTGTTGGCACCCCTTGCA+GGG - Chr8:54863781-54863800 MsG0880045141.01.T01:intron 50.0%
! CAGCTTTTCACGAAGCTCAG+GGG + Chr8:54859984-54860003 None:intergenic 50.0%
! CCACTCCACTTGGTGGAAAA+AGG - Chr8:54863911-54863930 MsG0880045141.01.T01:intron 50.0%
! CCTTTTTCCACCAAGTGGAG+TGG + Chr8:54863914-54863933 None:intergenic 50.0%
! CTGTTTGTTAGTTTCGGGCC+AGG - Chr8:54864090-54864109 MsG0880045141.01.T01:intron 50.0%
! GGTATCTTTGGGGGTTCCAA+GGG + Chr8:54859963-54859982 None:intergenic 50.0%
! TATTTGTTGGCACCCCTTGC+AGG - Chr8:54863780-54863799 MsG0880045141.01.T01:intron 50.0%
! TCGGTGCTTCATAGGTCCTA+AGG - Chr8:54860722-54860741 MsG0880045141.01.T01:intron 50.0%
! TCTGTGAGTCGGTGCTTCAT+AGG - Chr8:54860714-54860733 MsG0880045141.01.T01:intron 50.0%
!! AAGCTCAGGGGTATCTTTGG+GGG + Chr8:54859972-54859991 None:intergenic 50.0%
!! ACGAAGCTCAGGGGTATCTT+TGG + Chr8:54859975-54859994 None:intergenic 50.0%
!! AGGTGAGCTGGTAAGTTGGT+TGG - Chr8:54863974-54863993 MsG0880045141.01.T01:intron 50.0%
!! CGAAGCTCAGGGGTATCTTT+GGG + Chr8:54859974-54859993 None:intergenic 50.0%
!! GAAGCTCAGGGGTATCTTTG+GGG + Chr8:54859973-54859992 None:intergenic 50.0%
!! GAGCTGGTAAGTTGGTTGGA+GGG - Chr8:54863978-54863997 MsG0880045141.01.T01:intron 50.0%
!! TCCCTCTGTTTCTGGTCATG+TGG - Chr8:54862182-54862201 MsG0880045141.01.T01:intron 50.0%
!! TCTCTGAAACGTCGAAACGG+CGG + Chr8:54859930-54859949 None:intergenic 50.0%
!! TGAGCTGGTAAGTTGGTTGG+AGG - Chr8:54863977-54863996 MsG0880045141.01.T01:intron 50.0%
!! TTCGGATTCGGTGATGTGGT+TGG + Chr8:54859628-54859647 None:intergenic 50.0%
AGAACAGCGTGCCCTTCTTG+TGG - Chr8:54862432-54862451 MsG0880045141.01.T01:CDS 55.0%
AGCACAAACCCAGGACACCA+AGG + Chr8:54860573-54860592 None:intergenic 55.0%
AGCAGAGACACACACGGAGT+GGG - Chr8:54864005-54864024 MsG0880045141.01.T01:intron 55.0%
CATCAACCACTACCCCTGCA+AGG + Chr8:54863797-54863816 None:intergenic 55.0%
CGGAGTGGGGAGGATTTATG+AGG - Chr8:54864019-54864038 MsG0880045141.01.T01:intron 55.0%
CTATTCCATCTGCCCAAGCC+TGG + Chr8:54864111-54864130 None:intergenic 55.0%
CTGCGATCTTCTTGCTTGCC+TGG + Chr8:54861986-54862005 None:intergenic 55.0%
CTGTTTCCCTCTCGGCTGAA+AGG + Chr8:54862067-54862086 None:intergenic 55.0%
GAGTCGATTGCCAACTGGAC+AGG - Chr8:54861128-54861147 MsG0880045141.01.T01:CDS 55.0%
GGAGAGAGCAGAGACACACA+CGG - Chr8:54863999-54864018 MsG0880045141.01.T01:intron 55.0%
GGGGACAGCAAGAAGTTCAG+TGG + Chr8:54861826-54861845 None:intergenic 55.0%
GGTGTCCTGGGTTTGTGCTT+GGG - Chr8:54860574-54860593 MsG0880045141.01.T01:intron 55.0%
GGTGTGAGAAGGGAATTCGG+GGG - Chr8:54864040-54864059 MsG0880045141.01.T01:intron 55.0%
GTCAGTGTGATGTCGGACAC+TGG + Chr8:54860462-54860481 None:intergenic 55.0%
GTGTGAGAAGGGAATTCGGG+GGG - Chr8:54864041-54864060 MsG0880045141.01.T01:intron 55.0%
TCAACCACTACCCCTGCAAG+GGG + Chr8:54863795-54863814 None:intergenic 55.0%
TGGTGTCCTGGGTTTGTGCT+TGG - Chr8:54860573-54860592 MsG0880045141.01.T01:intron 55.0%
TTTGTTGGCACCCCTTGCAG+GGG - Chr8:54863782-54863801 MsG0880045141.01.T01:intron 55.0%
! ACAAGAAGGGCACGCTGTTC+TGG + Chr8:54862433-54862452 None:intergenic 55.0%
! CTTGCAGGGGTAGTGGTTGA+TGG - Chr8:54863795-54863814 MsG0880045141.01.T01:intron 55.0%
! GGGTATCTTTGGGGGTTCCA+AGG + Chr8:54859964-54859983 None:intergenic 55.0%
! GTTAGTTTCGGGCCAGGCTT+GGG - Chr8:54864096-54864115 MsG0880045141.01.T01:intron 55.0%
! TCCAGTTGGCAATCGACTCC+TGG + Chr8:54861127-54861146 None:intergenic 55.0%
! TGTTAGTTTCGGGCCAGGCT+TGG - Chr8:54864095-54864114 MsG0880045141.01.T01:intron 55.0%
!!! TTTTTTAGGGAGGCAGGGGG+TGG + Chr8:54862568-54862587 None:intergenic 55.0%
ATTGAAGCTGGCCGGCCGTT+CGG - Chr8:54859827-54859846 MsG0880045141.01.T01:three_prime_UTR 60.0%
CAAGGCCTTCTTCCCTCTGG+TGG - Chr8:54861187-54861206 MsG0880045141.01.T01:CDS 60.0%
CACCAGAGGGAAGAAGGCCT+TGG + Chr8:54861189-54861208 None:intergenic 60.0%
CCATGAGGCAGCTCCTGAGT+AGG - Chr8:54863489-54863508 MsG0880045141.01.T01:intron 60.0%
CCTACTCAGGAGCTGCCTCA+TGG + Chr8:54863492-54863511 None:intergenic 60.0%
GACCAAGGCCTTCTTCCCTC+TGG - Chr8:54861184-54861203 MsG0880045141.01.T01:CDS 60.0%
GAGAAGGGAATTCGGGGGGT+GGG - Chr8:54864045-54864064 MsG0880045141.01.T01:intron 60.0%
GAGCAGAGACACACACGGAG+TGG - Chr8:54864004-54864023 MsG0880045141.01.T01:intron 60.0%
GCAACGCCTTTCAGCCGAGA+GGG - Chr8:54862058-54862077 MsG0880045141.01.T01:CDS 60.0%
GCAGAGACACACACGGAGTG+GGG - Chr8:54864006-54864025 MsG0880045141.01.T01:intron 60.0%
GCCAGGAGTCGATTGCCAAC+TGG - Chr8:54861123-54861142 MsG0880045141.01.T01:CDS 60.0%
GCCCAAAGTGAGAGGTGAGC+TGG - Chr8:54863962-54863981 MsG0880045141.01.T01:intron 60.0%
GCCGGCCAGCTTCAATATCC+TGG + Chr8:54859823-54859842 None:intergenic 60.0%
TGAGAAGGGAATTCGGGGGG+TGG - Chr8:54864044-54864063 MsG0880045141.01.T01:intron 60.0%
! GGCAATCGACTCCTGGCAGT+GGG + Chr8:54861120-54861139 None:intergenic 60.0%
! TGGCAATCGACTCCTGGCAG+TGG + Chr8:54861121-54861140 None:intergenic 60.0%
AAGGGAATTCGGGGGGTGGG+CGG - Chr8:54864048-54864067 MsG0880045141.01.T01:intron 65.0%
AGACGCGGCGGACCGATCAA+CGG - Chr8:54859854-54859873 MsG0880045141.01.T01:three_prime_UTR 65.0%
CGCAACGCCTTTCAGCCGAG+AGG - Chr8:54862057-54862076 MsG0880045141.01.T01:CDS 65.0%
CGTCACTTGCTCCCACTGCC+AGG - Chr8:54861106-54861125 MsG0880045141.01.T01:CDS 65.0%
GAGACACACACGGAGTGGGG+AGG - Chr8:54864009-54864028 MsG0880045141.01.T01:intron 65.0%
GCAAGACCCAACGCAAGCGG+TGG - Chr8:54859880-54859899 MsG0880045141.01.T01:three_prime_UTR 65.0%
AGGGAGGCAGGGGGTGGAGT+GGG + Chr8:54862562-54862581 None:intergenic 70.0%
CCAACGCAAGCGGTGGCTGC+CGG - Chr8:54859887-54859906 MsG0880045141.01.T01:three_prime_UTR 70.0%
CCGCCGCGTCTCGAACCGAA+CGG + Chr8:54859845-54859864 None:intergenic 70.0%
CGCGTCTCGAACCGAACGGC+CGG + Chr8:54859841-54859860 None:intergenic 70.0%
CGGCAGCCACCGCTTGCGTT+GGG + Chr8:54859889-54859908 None:intergenic 70.0%
GGCACCCCTTGCAGGGGTAG+TGG - Chr8:54863788-54863807 MsG0880045141.01.T01:intron 70.0%
TAGGGAGGCAGGGGGTGGAG+TGG + Chr8:54862563-54862582 None:intergenic 70.0%
TCGGGCCAGGCTTGGGCAGA+TGG - Chr8:54864103-54864122 MsG0880045141.01.T01:intron 70.0%
! CCGTTCGGTTCGAGACGCGG+CGG - Chr8:54859842-54859861 MsG0880045141.01.T01:three_prime_UTR 70.0%
! CGGCCGTTCGGTTCGAGACG+CGG - Chr8:54859839-54859858 MsG0880045141.01.T01:three_prime_UTR 70.0%
CCGGCAGCCACCGCTTGCGT+TGG + Chr8:54859890-54859909 None:intergenic 75.0%
GGAATTCGGGGGGTGGGCGG+CGG - Chr8:54864051-54864070 MsG0880045141.01.T01:intron 75.0%
GGGAGGCAGGGGGTGGAGTG+GGG + Chr8:54862561-54862580 None:intergenic 75.0%
! ATTCGGGGGGTGGGCGGCGG+CGG - Chr8:54864054-54864073 MsG0880045141.01.T01:intron 80.0%
! CGGGGGGTGGGCGGCGGCGG+CGG - Chr8:54864057-54864076 MsG0880045141.01.T01:intron 95.0%
! GGGGTGGGCGGCGGCGGCGG+CGG - Chr8:54864060-54864079 MsG0880045141.01.T01:intron 95.0%
Chromosome Type Strat End Strand Name
Chr8 gene 54859577 54864934 54859577 ID=MsG0880045141.01;Name=MsG0880045141.01
Chr8 mRNA 54859577 54864934 54859577 ID=MsG0880045141.01.T01;Parent=MsG0880045141.01;Name=MsG0880045141.01.T01;_AED=0.37;_eAED=0.37;_QI=235|1|1|1|1|1|7|500|274
Chr8 exon 54859577 54860142 54859577 ID=MsG0880045141.01.T01:exon:23667;Parent=MsG0880045141.01.T01
Chr8 exon 54861106 54861206 54861106 ID=MsG0880045141.01.T01:exon:23666;Parent=MsG0880045141.01.T01
Chr8 exon 54861309 54861466 54861309 ID=MsG0880045141.01.T01:exon:23665;Parent=MsG0880045141.01.T01
Chr8 exon 54862047 54862121 54862047 ID=MsG0880045141.01.T01:exon:23664;Parent=MsG0880045141.01.T01
Chr8 exon 54862385 54862524 54862385 ID=MsG0880045141.01.T01:exon:23663;Parent=MsG0880045141.01.T01
Chr8 exon 54862860 54862953 54862860 ID=MsG0880045141.01.T01:exon:23662;Parent=MsG0880045141.01.T01
Chr8 exon 54864509 54864934 54864509 ID=MsG0880045141.01.T01:exon:23661;Parent=MsG0880045141.01.T01
Chr8 five_prime_UTR 54864700 54864934 54864700 ID=MsG0880045141.01.T01:five_prime_utr;Parent=MsG0880045141.01.T01
Chr8 CDS 54864509 54864699 54864509 ID=MsG0880045141.01.T01:cds;Parent=MsG0880045141.01.T01
Chr8 CDS 54862860 54862953 54862860 ID=MsG0880045141.01.T01:cds;Parent=MsG0880045141.01.T01
Chr8 CDS 54862385 54862524 54862385 ID=MsG0880045141.01.T01:cds;Parent=MsG0880045141.01.T01
Chr8 CDS 54862047 54862121 54862047 ID=MsG0880045141.01.T01:cds;Parent=MsG0880045141.01.T01
Chr8 CDS 54861309 54861466 54861309 ID=MsG0880045141.01.T01:cds;Parent=MsG0880045141.01.T01
Chr8 CDS 54861106 54861206 54861106 ID=MsG0880045141.01.T01:cds;Parent=MsG0880045141.01.T01
Chr8 CDS 54860077 54860142 54860077 ID=MsG0880045141.01.T01:cds;Parent=MsG0880045141.01.T01
Chr8 three_prime_UTR 54859577 54860076 54859577 ID=MsG0880045141.01.T01:three_prime_utr;Parent=MsG0880045141.01.T01
Gene Sequence

>MsG0880045141.01.T01

ATGAGCTTCCAGGATATTGAAGCTGGCCGGCCGTTCGGTTCGAGACGCGGCGGACCGATCAACGGAAAGCAAGACCCAACGCAAGCGGTGGCTGCCGGAATTTTTCAGATCAACACCGCCGTTTCGACGTTTCAGAGACTCGTTAATACCCTTGGAACCCCCAAAGATACCCCTGAGCTTCGTGAAAAGCTTCACAAGACAAGACAACATATTGGGCAGTTGGTGAAGGATACATCAGCCAAGCTTAAACAAGCTAGTGACATTGATCACCATGCCGATGTTAATGCAAGCAAGAAGATCGCAGATGCTAAACTTGCGAAAGATTTTCAAGCAGTGTTGAAAGAGTTTCAGAAGGCGCAACGCCTTTCAGCCGAGAGGGAAACAGCTTACACTCCTTTTGTTCCACAAGCAGTTCTTCCTTCGAGCTACACAGCTAGTGAAATGGATATTGGTACTGATAAGACACCAGAACAGCGTGCCCTTCTTGTGGAATCCAGAAGGCAGGAGGTTTTATTCTTAGATAATGAGATTGCATTCAATGAGGCAATCATTGAGGAAAGGGAGCAAGGCATTCAAGAAATACAGCAGCAAATTGGTGAAGTTAATGAAATTTTCAAAGATCTTGCTGTGCTTGTCCATGAACAAGGAACCATGATTGATGATATTGGTTCCAACATTGAGAACTCCCATGCAGCAACTGCACAAGCAAAGTCTCAACTTGCAAAAGCTTCAAAAACACAAAGATCAAATTCATCTTTGGCATGCTTGCTTTTGGTCATATTTGGGATTGTGCTTCTCATCGTGATCATAGTTCTTGCTGCTTAG
Protein sequence

>MsG0880045141.01.T01

MSFQDIEAGRPFGSRRGGPINGKQDPTQAVAAGIFQINTAVSTFQRLVNTLGTPKDTPELREKLHKTRQHIGQLVKDTSAKLKQASDIDHHADVNASKKIADAKLAKDFQAVLKEFQKAQRLSAERETAYTPFVPQAVLPSSYTASEMDIGTDKTPEQRALLVESRRQEVLFLDNEIAFNEAIIEEREQGIQEIQQQIGEVNEIFKDLAVLVHEQGTMIDDIGSNIENSHAATAQAKSQLAKASKTQRSNSSLACLLLVIFGIVLLIVIIVLAA*