Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041449.01.T01 | XP_003626125.1 | 95.305 | 426 | 12 | 3 | 1 | 425 | 1 | 419 | 0 | 843 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041449.01.T01 | Q9SFF6 | 67.866 | 417 | 128 | 2 | 8 | 424 | 4 | 414 | 0 | 619 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041449.01.T01 | Q2HRU2 | 95.305 | 426 | 12 | 3 | 1 | 425 | 1 | 419 | 0.0 | 843 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002936.01 | MsG0780041449.01 | 0.810489 | 1.123832e-50 | 6.783407e-48 |
| MsG0180004099.01 | MsG0780041449.01 | 0.825515 | 4.495704e-54 | 4.106555e-51 |
| MsG0780041449.01 | MsG0880047059.01 | 0.829030 | 6.465475e-55 | 6.537769e-52 |
| MsG0480020495.01 | MsG0780041449.01 | 0.801460 | 8.911780e-49 | 4.258263e-46 |
| MsG0380015805.01 | MsG0780041449.01 | 0.815187 | 1.051085e-51 | 7.196603e-49 |
| MsG0480018397.01 | MsG0780041449.01 | 0.803913 | 2.777601e-49 | 1.413068e-46 |
| MsG0780035954.01 | MsG0780041449.01 | 0.828897 | 6.962094e-55 | 7.012644e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041449.01.T01 | MTR_7g111280 | 95.305 | 426 | 12 | 3 | 1 | 425 | 1 | 419 | 0.0 | 843 |
| MsG0780041449.01.T01 | MTR_1g085070 | 72.706 | 425 | 91 | 5 | 1 | 424 | 1 | 401 | 0.0 | 629 |
| MsG0780041449.01.T01 | MTR_7g110900 | 71.390 | 367 | 105 | 0 | 59 | 425 | 49 | 415 | 0.0 | 589 |
| MsG0780041449.01.T01 | MTR_7g110900 | 71.585 | 366 | 104 | 0 | 59 | 424 | 49 | 414 | 0.0 | 586 |
| MsG0780041449.01.T01 | MTR_1g085620 | 69.430 | 386 | 116 | 1 | 41 | 424 | 17 | 402 | 0.0 | 584 |
| MsG0780041449.01.T01 | MTR_4g124320 | 65.023 | 426 | 130 | 2 | 3 | 425 | 12 | 421 | 0.0 | 582 |
| MsG0780041449.01.T01 | MTR_1g085620 | 71.380 | 297 | 85 | 0 | 128 | 424 | 1 | 297 | 9.99e-168 | 473 |
| MsG0780041449.01.T01 | MTR_8g072010 | 51.733 | 375 | 177 | 2 | 52 | 424 | 19 | 391 | 3.15e-148 | 427 |
| MsG0780041449.01.T01 | MTR_8g072000 | 51.771 | 367 | 175 | 1 | 60 | 424 | 26 | 392 | 4.46e-146 | 421 |
| MsG0780041449.01.T01 | MTR_8g072000 | 51.771 | 367 | 175 | 1 | 60 | 424 | 57 | 423 | 1.83e-145 | 421 |
| MsG0780041449.01.T01 | MTR_1g101000 | 53.930 | 369 | 165 | 3 | 60 | 423 | 37 | 405 | 1.21e-144 | 418 |
| MsG0780041449.01.T01 | MTR_1g101000 | 53.930 | 369 | 165 | 3 | 60 | 423 | 37 | 405 | 2.70e-144 | 418 |
| MsG0780041449.01.T01 | MTR_4g124320 | 64.194 | 310 | 92 | 2 | 3 | 309 | 12 | 305 | 3.50e-144 | 414 |
| MsG0780041449.01.T01 | MTR_1g101020 | 53.659 | 369 | 166 | 3 | 60 | 423 | 37 | 405 | 2.02e-142 | 412 |
| MsG0780041449.01.T01 | MTR_7g060760 | 50.409 | 367 | 176 | 2 | 61 | 425 | 56 | 418 | 7.58e-139 | 404 |
| MsG0780041449.01.T01 | MTR_5g042650 | 50.137 | 365 | 176 | 2 | 61 | 423 | 28 | 388 | 5.70e-137 | 398 |
| MsG0780041449.01.T01 | MTR_1g101000 | 52.819 | 337 | 154 | 3 | 60 | 391 | 37 | 373 | 5.62e-126 | 370 |
| MsG0780041449.01.T01 | MTR_1g036590 | 60.000 | 80 | 32 | 0 | 243 | 322 | 271 | 350 | 1.98e-24 | 104 |
| MsG0780041449.01.T01 | MTR_7g006750 | 50.000 | 94 | 47 | 0 | 201 | 294 | 467 | 560 | 3.37e-23 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041449.01.T01 | AT3G05910 | 67.866 | 417 | 128 | 2 | 8 | 424 | 4 | 414 | 0.0 | 619 |
| MsG0780041449.01.T01 | AT5G26670 | 68.706 | 425 | 122 | 3 | 1 | 424 | 1 | 415 | 0.0 | 613 |
| MsG0780041449.01.T01 | AT1G57590 | 73.352 | 364 | 97 | 0 | 61 | 424 | 79 | 442 | 0.0 | 590 |
| MsG0780041449.01.T01 | AT3G62060 | 61.916 | 428 | 142 | 4 | 4 | 424 | 5 | 418 | 0.0 | 567 |
| MsG0780041449.01.T01 | AT3G62060 | 61.916 | 428 | 142 | 4 | 4 | 424 | 5 | 418 | 0.0 | 566 |
| MsG0780041449.01.T01 | AT2G46930 | 60.714 | 420 | 147 | 3 | 5 | 424 | 14 | 415 | 0.0 | 556 |
| MsG0780041449.01.T01 | AT5G26670 | 72.391 | 297 | 82 | 0 | 128 | 424 | 1 | 297 | 3.32e-169 | 476 |
| MsG0780041449.01.T01 | AT5G26670 | 72.391 | 297 | 82 | 0 | 128 | 424 | 1 | 297 | 3.32e-169 | 476 |
| MsG0780041449.01.T01 | AT5G26670 | 72.391 | 297 | 82 | 0 | 128 | 424 | 1 | 297 | 3.32e-169 | 476 |
| MsG0780041449.01.T01 | AT1G09550 | 59.128 | 367 | 146 | 2 | 40 | 403 | 17 | 382 | 3.98e-163 | 464 |
| MsG0780041449.01.T01 | AT4G19420 | 54.377 | 377 | 170 | 1 | 51 | 425 | 14 | 390 | 4.45e-156 | 447 |
| MsG0780041449.01.T01 | AT4G19420 | 54.377 | 377 | 170 | 1 | 51 | 425 | 14 | 390 | 4.45e-156 | 447 |
| MsG0780041449.01.T01 | AT5G23870 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 6.75e-150 | 432 |
| MsG0780041449.01.T01 | AT5G23870 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 6.75e-150 | 432 |
| MsG0780041449.01.T01 | AT5G23870 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 9.00e-150 | 432 |
| MsG0780041449.01.T01 | AT5G23870 | 54.076 | 368 | 163 | 4 | 62 | 423 | 35 | 402 | 1.14e-149 | 432 |
| MsG0780041449.01.T01 | AT4G19420 | 50.000 | 412 | 169 | 2 | 51 | 425 | 14 | 425 | 1.24e-149 | 432 |
| MsG0780041449.01.T01 | AT3G05910 | 64.725 | 309 | 103 | 2 | 8 | 316 | 4 | 306 | 4.93e-149 | 426 |
| MsG0780041449.01.T01 | AT3G09410 | 47.307 | 427 | 207 | 4 | 2 | 425 | 16 | 427 | 7.91e-144 | 417 |
| MsG0780041449.01.T01 | AT3G09405 | 45.606 | 421 | 202 | 4 | 2 | 419 | 13 | 409 | 4.64e-136 | 396 |
| MsG0780041449.01.T01 | AT5G45280 | 49.307 | 361 | 180 | 2 | 62 | 419 | 24 | 384 | 6.94e-135 | 393 |
| MsG0780041449.01.T01 | AT4G19410 | 49.030 | 361 | 181 | 2 | 62 | 419 | 24 | 384 | 1.70e-134 | 392 |
| MsG0780041449.01.T01 | AT4G19410 | 49.128 | 344 | 173 | 1 | 62 | 403 | 24 | 367 | 2.38e-127 | 378 |
| MsG0780041449.01.T01 | AT3G09410 | 51.796 | 334 | 158 | 1 | 61 | 391 | 60 | 393 | 1.66e-125 | 369 |
| MsG0780041449.01.T01 | AT5G45280 | 52.128 | 282 | 133 | 1 | 62 | 341 | 24 | 305 | 4.15e-109 | 326 |
| MsG0780041449.01.T01 | AT3G09405 | 49.175 | 303 | 149 | 2 | 120 | 419 | 2 | 302 | 3.31e-108 | 322 |
| MsG0780041449.01.T01 | AT4G19420 | 56.522 | 230 | 98 | 1 | 51 | 278 | 14 | 243 | 2.86e-90 | 276 |
Find 124 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATCACCAACTTGGTTTA+TGG | 0.071657 | 7:+91033699 | MsG0780041449.01.T01:CDS |
| AATTCAGAGGACAGCGAATT+TGG | 0.187648 | 7:+91034857 | MsG0780041449.01.T01:CDS |
| GCTAATCAGGCTCTTCTTTC+CGG | 0.191020 | 7:+91034922 | MsG0780041449.01.T01:CDS |
| ATACATCACCTTGCAGAAAT+TGG | 0.207626 | 7:-91035973 | None:intergenic |
| CAGACAATTCTCCGGTTATT+AGG | 0.224305 | 7:+91036215 | MsG0780041449.01.T01:CDS |
| ATCTTTATAATCAAGCTAAA+AGG | 0.236684 | 7:-91036746 | None:intergenic |
| AATGGAAGATTTGATGTTAA+AGG | 0.242008 | 7:+91034888 | MsG0780041449.01.T01:CDS |
| TGTGATGGTGGCTCATTTAC+TGG | 0.246928 | 7:+91034470 | MsG0780041449.01.T01:CDS |
| TACCATTTGCATCGTGGATA+TGG | 0.251407 | 7:+91033987 | MsG0780041449.01.T01:CDS |
| TTGGTTTATGGGTTTGAATT+AGG | 0.260228 | 7:+91033711 | MsG0780041449.01.T01:CDS |
| TATGGGTTTGAATTAGGATA+TGG | 0.270691 | 7:+91033717 | MsG0780041449.01.T01:CDS |
| TTGATTGTCATCGGTGAAAT+TGG | 0.280151 | 7:+91036602 | MsG0780041449.01.T01:three_prime_UTR |
| TTATATATTGTACCTCTTCC+TGG | 0.282763 | 7:+91033576 | MsG0780041449.01.T01:five_prime_UTR |
| CACAAAACGCAGAGAGTTTA+CGG | 0.284986 | 7:-91033538 | None:intergenic |
| TTATCACCAACTTGGTTTAT+GGG | 0.298292 | 7:+91033700 | MsG0780041449.01.T01:CDS |
| TCAATACTGCTTATGATTCA+TGG | 0.299224 | 7:+91035614 | MsG0780041449.01.T01:CDS |
| TGAAGAACTCTTTCTGTTAG+AGG | 0.300195 | 7:+91033770 | MsG0780041449.01.T01:CDS |
| CAGTTGGCTTGTTAATTTAG+AGG | 0.330535 | 7:+91034022 | MsG0780041449.01.T01:CDS |
| AATTATAGGATTGATATATC+TGG | 0.336116 | 7:+91035164 | MsG0780041449.01.T01:intron |
| TAGCAGCTGCATTGTGGATA+AGG | 0.344441 | 7:-91033854 | None:intergenic |
| ATGGAAGATTTGATGTTAAA+GGG | 0.348581 | 7:+91034889 | MsG0780041449.01.T01:CDS |
| CACTTCACTTTAGTAGTCCT+TGG | 0.363666 | 7:-91035003 | None:intergenic |
| TATGATGTTAAGGAACAAAA+AGG | 0.371526 | 7:-91036661 | None:intergenic |
| CCTTGCAGAAATTGGATTTG+TGG | 0.382065 | 7:-91035965 | None:intergenic |
| TTCACCTTGTTCCTAATAAC+CGG | 0.384001 | 7:-91036226 | None:intergenic |
| TGATAATACATGTCACCATT+TGG | 0.393033 | 7:+91036473 | MsG0780041449.01.T01:CDS |
| CAGCAGATCCCCATGGCTAT+TGG | 0.396660 | 7:+91035906 | MsG0780041449.01.T01:CDS |
| CTTCTTTCCGGATGTTCAGC+GGG | 0.402249 | 7:+91034934 | MsG0780041449.01.T01:CDS |
| ATTCAGAGGACAGCGAATTT+GGG | 0.404061 | 7:+91034858 | MsG0780041449.01.T01:CDS |
| CAACACCACTGTACATATTC+CGG | 0.405411 | 7:-91035199 | None:intergenic |
| TTACTAAGTATTCCTGTGAA+TGG | 0.407702 | 7:-91034288 | None:intergenic |
| ATGTATCTTGCCTCTCGGTT+TGG | 0.417685 | 7:-91036186 | None:intergenic |
| AGCAGCTGCATTGTGGATAA+GGG | 0.417871 | 7:-91033853 | None:intergenic |
| TATTACTATCACGGCACGTT+TGG | 0.417905 | 7:-91033497 | None:intergenic |
| GCATCCTTTCTTGAGGGTAA+TGG | 0.436523 | 7:+91033807 | MsG0780041449.01.T01:CDS |
| TAGGTAATTGCTTTAGCTGT+TGG | 0.437321 | 7:+91036396 | MsG0780041449.01.T01:intron |
| GCTGCATACTTATGATGTTA+AGG | 0.437924 | 7:-91036671 | None:intergenic |
| TTGGTTTCTTGCAGTGTGCT+TGG | 0.438110 | 7:+91033947 | MsG0780041449.01.T01:intron |
| AATATGTACAGTGGTGTTGT+AGG | 0.448233 | 7:+91035203 | MsG0780041449.01.T01:CDS |
| TAGGCCACCCGCTGAACATC+CGG | 0.448568 | 7:-91034941 | None:intergenic |
| GCGAATTTGGGCAGCTGCAA+TGG | 0.455500 | 7:+91034870 | MsG0780041449.01.T01:CDS |
| TACTGGAGATGGTGAAGATC+AGG | 0.456973 | 7:+91034487 | MsG0780041449.01.T01:CDS |
| TTTCTTGCAGTGTGCTTGGA+TGG | 0.462046 | 7:+91033951 | MsG0780041449.01.T01:intron |
| TTGCTTTAGCTGTTGGAGAC+TGG | 0.466598 | 7:+91036403 | MsG0780041449.01.T01:CDS |
| GTCTCTTGAATACAGGGTTC+AGG | 0.466892 | 7:+91036083 | MsG0780041449.01.T01:intron |
| AATAAACCTGAAGAAAATCC+AGG | 0.477981 | 7:+91034309 | MsG0780041449.01.T01:CDS |
| ATCCACAATGCAGCTGCTAA+AGG | 0.480879 | 7:+91033858 | MsG0780041449.01.T01:CDS |
| GTGAAGTGTCTTAGCGATGC+AGG | 0.481043 | 7:+91035018 | MsG0780041449.01.T01:CDS |
| ATTTCCATTACCCTCAAGAA+AGG | 0.487996 | 7:-91033811 | None:intergenic |
| TAACTTGATTTGATTGTCAT+CGG | 0.489011 | 7:+91036593 | MsG0780041449.01.T01:three_prime_UTR |
| TTCTCAAGATCAAACAAGAA+TGG | 0.489491 | 7:+91036133 | MsG0780041449.01.T01:CDS |
| TCTTTATAATCAAGCTAAAA+GGG | 0.494899 | 7:-91036745 | None:intergenic |
| TTGCATCGTGGATATGGATC+AGG | 0.495342 | 7:+91033993 | MsG0780041449.01.T01:CDS |
| AATTTCGAGGTCTCTTTCCA+AGG | 0.497114 | 7:+91034986 | MsG0780041449.01.T01:CDS |
| ATCATCATTATACATGGAAA+AGG | 0.501178 | 7:+91034260 | MsG0780041449.01.T01:CDS |
| TGGCTCAACTGAAAACCAAA+TGG | 0.503838 | 7:-91036488 | None:intergenic |
| CTCCTTTAGCAGCTGCATTG+TGG | 0.510189 | 7:-91033860 | None:intergenic |
| TGCATTCATGCCAATAGCCA+TGG | 0.510756 | 7:-91035916 | None:intergenic |
| ATCCATATCCACGATGCAAA+TGG | 0.517887 | 7:-91033989 | None:intergenic |
| CATGCAGCATCCTTTCTTGA+GGG | 0.518276 | 7:+91033801 | MsG0780041449.01.T01:CDS |
| ATACACTGTGATGAATTTCG+AGG | 0.519543 | 7:+91034973 | MsG0780041449.01.T01:CDS |
| ACCCAGAAAAGTTTAGCCAT+TGG | 0.528435 | 7:-91033657 | None:intergenic |
| TAGCCATGGGGATCTGCTGA+TGG | 0.530490 | 7:-91035902 | None:intergenic |
| TCGTACATGATCATCATCAA+TGG | 0.532122 | 7:+91036515 | MsG0780041449.01.T01:three_prime_UTR |
| AGGACTTGTTATCACCAACT+TGG | 0.533797 | 7:+91033692 | MsG0780041449.01.T01:CDS |
| TGATGATCATGTACGAACTT+TGG | 0.542070 | 7:-91036508 | None:intergenic |
| CCACGATGCAAATGGTAACC+AGG | 0.545374 | 7:-91033981 | None:intergenic |
| GCATTCATGCCAATAGCCAT+GGG | 0.548266 | 7:-91035915 | None:intergenic |
| TATCTGGCGAGCGCACCCTC+CGG | 0.549827 | 7:+91035180 | MsG0780041449.01.T01:CDS |
| GTAAAGCTTCGTTATTGTGA+TGG | 0.550885 | 7:+91034455 | MsG0780041449.01.T01:CDS |
| CAGTGGTGTTGTAGGGATGC+AGG | 0.553790 | 7:+91035211 | MsG0780041449.01.T01:CDS |
| TGCTTGGATGGAACATTACC+TGG | 0.558834 | 7:+91033963 | MsG0780041449.01.T01:CDS |
| TTCAAACCCATAAACCAAGT+TGG | 0.559248 | 7:-91033706 | None:intergenic |
| AATGCAGCTGCTAAAGGAGC+AGG | 0.563358 | 7:+91033864 | MsG0780041449.01.T01:CDS |
| AAACCGAGAGGCAAGATACA+TGG | 0.565165 | 7:+91036188 | MsG0780041449.01.T01:CDS |
| GCGTGGATCATCATTATACA+TGG | 0.565339 | 7:+91034254 | MsG0780041449.01.T01:CDS |
| TACTGCTTATGATTCATGGC+AGG | 0.565480 | 7:+91035618 | MsG0780041449.01.T01:CDS |
| TCTTCTTTCCGGATGTTCAG+CGG | 0.565522 | 7:+91034933 | MsG0780041449.01.T01:CDS |
| GTGGCCTTGTGCATTTAGCA+TGG | 0.567737 | 7:-91035946 | None:intergenic |
| GTGTTTATCGCAAGAAAACA+CGG | 0.570483 | 7:+91034232 | MsG0780041449.01.T01:CDS |
| AAACAACACTCACCAGGAAG+AGG | 0.574538 | 7:-91033588 | None:intergenic |
| AGAAACATTGTCATCGCCAA+TGG | 0.576057 | 7:+91033641 | MsG0780041449.01.T01:exon |
| ACATGCAGCATCCTTTCTTG+AGG | 0.576567 | 7:+91033800 | MsG0780041449.01.T01:CDS |
| CACAGTGTATAATAGTAGCT+AGG | 0.579094 | 7:-91034960 | None:intergenic |
| AAACGCAGAGAGTTTACGGC+GGG | 0.579161 | 7:-91033534 | None:intergenic |
| GGTGGCTCATTTACTGGAGA+TGG | 0.581728 | 7:+91034476 | MsG0780041449.01.T01:CDS |
| TCTAACTGTCATCAGGGAGG+TGG | 0.582270 | 7:+91034186 | MsG0780041449.01.T01:intron |
| ACACTGGCAATCAAATTCTG+AGG | 0.583315 | 7:-91035571 | None:intergenic |
| ATGATTATGATTACCGAGGT+AGG | 0.584023 | 7:-91035406 | None:intergenic |
| AGAAAGAAACAACACTCACC+AGG | 0.585702 | 7:-91033594 | None:intergenic |
| CATGTATTATCACAAGGGTA+AGG | 0.587582 | 7:-91036462 | None:intergenic |
| ATGGATCAGGAGCAAACAGT+TGG | 0.589134 | 7:+91034006 | MsG0780041449.01.T01:CDS |
| TTCACTATTTGGGAATGCTG+AGG | 0.589472 | 7:+91036633 | MsG0780041449.01.T01:three_prime_UTR |
| CACTGGCAATCAAATTCTGA+GGG | 0.591267 | 7:-91035570 | None:intergenic |
| CTTTCCGGATGTTCAGCGGG+TGG | 0.596559 | 7:+91034937 | MsG0780041449.01.T01:CDS |
| GAAAAGGAGATACCATTCAC+AGG | 0.596897 | 7:+91034276 | MsG0780041449.01.T01:CDS |
| AAACCATGTATCTTGCCTCT+CGG | 0.596928 | 7:-91036191 | None:intergenic |
| AAGCTTCGTTATTGTGATGG+TGG | 0.600562 | 7:+91034458 | MsG0780041449.01.T01:CDS |
| CATCATAAGTATGCAGCCGT+AGG | 0.608287 | 7:+91036677 | MsG0780041449.01.T01:three_prime_UTR |
| TGGTGACATGTATTATCACA+AGG | 0.608610 | 7:-91036468 | None:intergenic |
| TGAAGTGTCTTAGCGATGCA+GGG | 0.608865 | 7:+91035019 | MsG0780041449.01.T01:CDS |
| CCTGGTTACCATTTGCATCG+TGG | 0.609738 | 7:+91033981 | MsG0780041449.01.T01:CDS |
| TGATTACCGAGGTAGGATCA+AGG | 0.612410 | 7:-91035399 | None:intergenic |
| ATATGTACAGTGGTGTTGTA+GGG | 0.613917 | 7:+91035204 | MsG0780041449.01.T01:CDS |
| CCATGGGGATCTGCTGATGG+AGG | 0.617825 | 7:-91035899 | None:intergenic |
| ACTGTCATCAGGGAGGTGGA+TGG | 0.626588 | 7:+91034190 | MsG0780041449.01.T01:intron |
| AGGGTGAGTCCTACGAGCAG+AGG | 0.626989 | 7:-91033834 | None:intergenic |
| TTCTCCGGTTATTAGGAACA+AGG | 0.636482 | 7:+91036222 | MsG0780041449.01.T01:CDS |
| CACCACTGTACATATTCCGG+AGG | 0.638914 | 7:-91035196 | None:intergenic |
| AATGGAAATCCTCTGCTCGT+AGG | 0.640827 | 7:+91033825 | MsG0780041449.01.T01:CDS |
| CCTCCATCAGCAGATCCCCA+TGG | 0.647413 | 7:+91035899 | MsG0780041449.01.T01:CDS |
| CCACAAATCCAATTTCTGCA+AGG | 0.649408 | 7:+91035965 | MsG0780041449.01.T01:CDS |
| TACATGATCATCATCAATGG+AGG | 0.650804 | 7:+91036518 | MsG0780041449.01.T01:three_prime_UTR |
| TAATCACCTTGATCCTACCT+CGG | 0.661838 | 7:+91035393 | MsG0780041449.01.T01:CDS |
| GAAGCAGAACTGCAATTCAG+AGG | 0.664323 | 7:+91034844 | MsG0780041449.01.T01:CDS |
| ACCACTGTACATATTCCGGA+GGG | 0.680732 | 7:-91035195 | None:intergenic |
| TATCGCAAGAAAACACGGCG+TGG | 0.683797 | 7:+91034237 | MsG0780041449.01.T01:CDS |
| AGGTGATTAGTACAAATCTG+TGG | 0.684849 | 7:-91035379 | None:intergenic |
| TCGCTCACTGCCAAACCGAG+AGG | 0.692246 | 7:+91036176 | MsG0780041449.01.T01:CDS |
| TAAACCATGCTAAATGCACA+AGG | 0.692567 | 7:+91035942 | MsG0780041449.01.T01:CDS |
| GGTGACATGTATTATCACAA+GGG | 0.699950 | 7:-91036467 | None:intergenic |
| ACCCTCCGGAATATGTACAG+TGG | 0.725020 | 7:+91035194 | MsG0780041449.01.T01:CDS |
| CATTCATGCCAATAGCCATG+GGG | 0.744235 | 7:-91035914 | None:intergenic |
| AAAACGCAGAGAGTTTACGG+CGG | 0.775087 | 7:-91033535 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATGTAAAATTTGATATTT+TGG | + | Chr7:91034599-91034618 | MsG0780041449.01.T01:intron | 10.0% |
| !!! | TATGTAAAATTTGATATTTT+GGG | + | Chr7:91034600-91034619 | MsG0780041449.01.T01:intron | 10.0% |
| !!! | TTAGAAATAATTAAAGTTTT+AGG | + | Chr7:91034160-91034179 | MsG0780041449.01.T01:intron | 10.0% |
| !! | AAAAACAATATTGAAAAGTT+TGG | + | Chr7:91033468-91033487 | MsG0780041449.01.T01:five_prime_UTR | 15.0% |
| !! | AAATAGTTTATATTCTTTCA+TGG | + | Chr7:91035271-91035290 | MsG0780041449.01.T01:intron | 15.0% |
| !! | AATGAAATGATTAAATGTAT+CGG | + | Chr7:91035769-91035788 | MsG0780041449.01.T01:intron | 15.0% |
| !! | ACATTTAATCATTTCATTAT+CGG | - | Chr7:91035767-91035786 | None:intergenic | 15.0% |
| !! | ATAAACTATTTGTAATAAGT+TGG | - | Chr7:91035262-91035281 | None:intergenic | 15.0% |
| !! | ATGTAAAAATTAATTACACT+AGG | + | Chr7:91034519-91034538 | MsG0780041449.01.T01:intron | 15.0% |
| !! | CAAAAATATTTAATATTGAG+AGG | - | Chr7:91033930-91033949 | None:intergenic | 15.0% |
| !! | TACAATATATAAAAAGAAAG+TGG | - | Chr7:91033568-91033587 | None:intergenic | 15.0% |
| !! | TTATTACTATATTATTCAGT+TGG | + | Chr7:91036045-91036064 | MsG0780041449.01.T01:intron | 15.0% |
| !!! | CTCTCAATATTAAATATTTT+TGG | + | Chr7:91033928-91033947 | MsG0780041449.01.T01:intron | 15.0% |
| !!! | GATTAATTTTTTTGTAATGA+TGG | - | Chr7:91035112-91035131 | None:intergenic | 15.0% |
| !!! | TTGCTTTTTTAATTTGTTAT+AGG | + | Chr7:91034370-91034389 | MsG0780041449.01.T01:intron | 15.0% |
| !! | AAATAATAGTATATGAGATG+TGG | + | Chr7:91035694-91035713 | MsG0780041449.01.T01:intron | 20.0% |
| !! | AATTATAGGATTGATATATC+TGG | + | Chr7:91035164-91035183 | MsG0780041449.01.T01:intron | 20.0% |
| !! | AATTGAATGAAAATTAAACC+TGG | - | Chr7:91034330-91034349 | None:intergenic | 20.0% |
| !! | ATATTTAATATTGAGAGGAA+AGG | - | Chr7:91033925-91033944 | None:intergenic | 20.0% |
| !! | TTTGTTTGCATTGAAATTAT+AGG | + | Chr7:91035150-91035169 | MsG0780041449.01.T01:intron | 20.0% |
| !!! | AATTTGCAGATTTTTTCAAT+TGG | + | Chr7:91034426-91034445 | MsG0780041449.01.T01:intron | 20.0% |
| !!! | AGTTAACTTTTATGCAAAAA+AGG | - | Chr7:91034664-91034683 | None:intergenic | 20.0% |
| !!! | TCTTTTCTTTTCTTTTCTTT+TGG | + | Chr7:91034074-91034093 | MsG0780041449.01.T01:intron | 20.0% |
| !!! | TTCAAGTTTTATTACTATCA+CGG | - | Chr7:91033509-91033528 | None:intergenic | 20.0% |
| ! | AATATCCTAAGTTTGTCAAT+TGG | + | Chr7:91035643-91035662 | MsG0780041449.01.T01:intron | 25.0% |
| ! | AATGGAAGATTTGATGTTAA+AGG | + | Chr7:91034888-91034907 | MsG0780041449.01.T01:CDS | 25.0% |
| ! | ATCATCATTATACATGGAAA+AGG | + | Chr7:91034260-91034279 | MsG0780041449.01.T01:CDS | 25.0% |
| ! | ATGGAAGATTTGATGTTAAA+GGG | + | Chr7:91034889-91034908 | MsG0780041449.01.T01:CDS | 25.0% |
| ! | ATTATTTGTTTGATCACTGT+AGG | + | Chr7:91035339-91035358 | MsG0780041449.01.T01:intron | 25.0% |
| ! | TATGATGTTAAGGAACAAAA+AGG | - | Chr7:91036664-91036683 | None:intergenic | 25.0% |
| ! | TGAAAAAGGAGTAATAAAAC+AGG | - | Chr7:91035541-91035560 | None:intergenic | 25.0% |
| !! | ATTTTCAGTTAATTATGCCA+TGG | - | Chr7:91034138-91034157 | None:intergenic | 25.0% |
| !! | TAACTTGATTTGATTGTCAT+CGG | + | Chr7:91036593-91036612 | MsG0780041449.01.T01:three_prime_UTR | 25.0% |
| !! | TACATACATTGACTAAATGT+AGG | + | Chr7:91036377-91036396 | MsG0780041449.01.T01:intron | 25.0% |
| !! | TAGATTTTAGATCAATCCTA+CGG | - | Chr7:91036696-91036715 | None:intergenic | 25.0% |
| !! | TTTTATGCAAAAAAGGATAC+AGG | - | Chr7:91034657-91034676 | None:intergenic | 25.0% |
| !! | TTTTGTAATGATGGTAGAAA+TGG | - | Chr7:91035103-91035122 | None:intergenic | 25.0% |
| !!! | TAGAGGTATTTCTTCTTATT+TGG | + | Chr7:91034039-91034058 | MsG0780041449.01.T01:intron | 25.0% |
| !!! | TTCAGTTTTGTCAAATAGTT+AGG | + | Chr7:91035440-91035459 | MsG0780041449.01.T01:intron | 25.0% |
| AACATTGGACACTATACTAA+CGG | + | Chr7:91035727-91035746 | MsG0780041449.01.T01:intron | 30.0% | |
| AATAAACCTGAAGAAAATCC+AGG | + | Chr7:91034309-91034328 | MsG0780041449.01.T01:CDS | 30.0% | |
| ACATGGTTGTAACATTTGTA+AGG | + | Chr7:91035306-91035325 | MsG0780041449.01.T01:intron | 30.0% | |
| AGGTTGTATTGTTTGTTTGT+AGG | - | Chr7:91033895-91033914 | None:intergenic | 30.0% | |
| ATCAATGATTATGATTACCG+AGG | - | Chr7:91035413-91035432 | None:intergenic | 30.0% | |
| TATGGGTTTGAATTAGGATA+TGG | + | Chr7:91033717-91033736 | MsG0780041449.01.T01:CDS | 30.0% | |
| TCAATACTGCTTATGATTCA+TGG | + | Chr7:91035614-91035633 | MsG0780041449.01.T01:CDS | 30.0% | |
| TGATAATACATGTCACCATT+TGG | + | Chr7:91036473-91036492 | MsG0780041449.01.T01:CDS | 30.0% | |
| TTACTAAGTATTCCTGTGAA+TGG | - | Chr7:91034291-91034310 | None:intergenic | 30.0% | |
| TTATATATTGTACCTCTTCC+TGG | + | Chr7:91033576-91033595 | MsG0780041449.01.T01:five_prime_UTR | 30.0% | |
| TTATCACCAACTTGGTTTAT+GGG | + | Chr7:91033700-91033719 | MsG0780041449.01.T01:CDS | 30.0% | |
| TTCTCAAGATCAAACAAGAA+TGG | + | Chr7:91036133-91036152 | MsG0780041449.01.T01:CDS | 30.0% | |
| TTGGTTTATGGGTTTGAATT+AGG | + | Chr7:91033711-91033730 | MsG0780041449.01.T01:CDS | 30.0% | |
| TTTAATATTGAGAGGAAAGG+TGG | - | Chr7:91033922-91033941 | None:intergenic | 30.0% | |
| ! | ATTAAACCTGGATTTTCTTC+AGG | - | Chr7:91034318-91034337 | None:intergenic | 30.0% |
| ! | CATGGCTATGTTATTTAACA+TGG | + | Chr7:91035289-91035308 | MsG0780041449.01.T01:intron | 30.0% |
| ! | CTTTATTTACGTATGTTGTC+TGG | + | Chr7:91034813-91034832 | MsG0780041449.01.T01:intron | 30.0% |
| !!! | GGAAGTGTTTTTCACTATTT+GGG | + | Chr7:91036623-91036642 | MsG0780041449.01.T01:three_prime_UTR | 30.0% |
| !!! | TGGAAGTGTTTTTCACTATT+TGG | + | Chr7:91036622-91036641 | MsG0780041449.01.T01:three_prime_UTR | 30.0% |
| AAAAAGTGGTGTTCTAACAC+TGG | - | Chr7:91035590-91035609 | None:intergenic | 35.0% | |
| AATGATGGTAGAAATGGCAT+TGG | - | Chr7:91035097-91035116 | None:intergenic | 35.0% | |
| AGGATTTCTAACTGTCATCA+GGG | + | Chr7:91034180-91034199 | MsG0780041449.01.T01:intron | 35.0% | |
| AGGTGATTAGTACAAATCTG+TGG | - | Chr7:91035382-91035401 | None:intergenic | 35.0% | |
| ATACACTGTGATGAATTTCG+AGG | + | Chr7:91034973-91034992 | MsG0780041449.01.T01:CDS | 35.0% | |
| ATACATCACCTTGCAGAAAT+TGG | - | Chr7:91035976-91035995 | None:intergenic | 35.0% | |
| ATGAGCAACAATAACATGAG+AGG | - | Chr7:91034402-91034421 | None:intergenic | 35.0% | |
| ATGATTATGATTACCGAGGT+AGG | - | Chr7:91035409-91035428 | None:intergenic | 35.0% | |
| ATTTCCATTACCCTCAAGAA+AGG | - | Chr7:91033814-91033833 | None:intergenic | 35.0% | |
| CAAAAAAGGATACAGGTCTA+CGG | - | Chr7:91034650-91034669 | None:intergenic | 35.0% | |
| CAAGTCATGTATCTCAACAA+TGG | - | Chr7:91034749-91034768 | None:intergenic | 35.0% | |
| CACAGTGTATAATAGTAGCT+AGG | - | Chr7:91034963-91034982 | None:intergenic | 35.0% | |
| CATGTATTATCACAAGGGTA+AGG | - | Chr7:91036465-91036484 | None:intergenic | 35.0% | |
| CTTGACTGAATCTGATAACA+AGG | - | Chr7:91035872-91035891 | None:intergenic | 35.0% | |
| GACTACCAATTGACAAACTT+AGG | - | Chr7:91035651-91035670 | None:intergenic | 35.0% | |
| GCTGCATACTTATGATGTTA+AGG | - | Chr7:91036674-91036693 | None:intergenic | 35.0% | |
| GGTGACATGTATTATCACAA+GGG | - | Chr7:91036470-91036489 | None:intergenic | 35.0% | |
| GTAAAGCTTCGTTATTGTGA+TGG | + | Chr7:91034455-91034474 | MsG0780041449.01.T01:CDS | 35.0% | |
| GTGTTTATCGCAAGAAAACA+CGG | + | Chr7:91034232-91034251 | MsG0780041449.01.T01:CDS | 35.0% | |
| GTTATCACCAACTTGGTTTA+TGG | + | Chr7:91033699-91033718 | MsG0780041449.01.T01:CDS | 35.0% | |
| TAAACCATGCTAAATGCACA+AGG | + | Chr7:91035942-91035961 | MsG0780041449.01.T01:CDS | 35.0% | |
| TACATGATCATCATCAATGG+AGG | + | Chr7:91036518-91036537 | MsG0780041449.01.T01:three_prime_UTR | 35.0% | |
| TAGGATTTCTAACTGTCATC+AGG | + | Chr7:91034179-91034198 | MsG0780041449.01.T01:intron | 35.0% | |
| TAGGTAATTGCTTTAGCTGT+TGG | + | Chr7:91036396-91036415 | MsG0780041449.01.T01:intron | 35.0% | |
| TCGTACATGATCATCATCAA+TGG | + | Chr7:91036515-91036534 | MsG0780041449.01.T01:three_prime_UTR | 35.0% | |
| TGAAGAACTCTTTCTGTTAG+AGG | + | Chr7:91033770-91033789 | MsG0780041449.01.T01:CDS | 35.0% | |
| TGATGATCATGTACGAACTT+TGG | - | Chr7:91036511-91036530 | None:intergenic | 35.0% | |
| TGGTATTCTTGTGATTAGTG+TGG | - | Chr7:91035242-91035261 | None:intergenic | 35.0% | |
| TGGTGACATGTATTATCACA+AGG | - | Chr7:91036471-91036490 | None:intergenic | 35.0% | |
| TGTAACATGCATATATGCCA+TGG | + | Chr7:91034118-91034137 | MsG0780041449.01.T01:intron | 35.0% | |
| TTAGTACCATTCATTGCAAG+TGG | + | Chr7:91036001-91036020 | MsG0780041449.01.T01:intron | 35.0% | |
| TTCAAACCCATAAACCAAGT+TGG | - | Chr7:91033709-91033728 | None:intergenic | 35.0% | |
| TTCACCTTGTTCCTAATAAC+CGG | - | Chr7:91036229-91036248 | None:intergenic | 35.0% | |
| TTGATTGTCATCGGTGAAAT+TGG | + | Chr7:91036602-91036621 | MsG0780041449.01.T01:three_prime_UTR | 35.0% | |
| ! | ATGGTTTTCAGACAATTCTC+CGG | + | Chr7:91036207-91036226 | MsG0780041449.01.T01:CDS | 35.0% |
| ! | GCAGTATTGAGAAGAAAAAG+TGG | - | Chr7:91035604-91035623 | None:intergenic | 35.0% |
| ! | TTCTGGGTTTTCATTGCAAT+AGG | + | Chr7:91033672-91033691 | MsG0780041449.01.T01:CDS | 35.0% |
| ! | TTTTCTCCACTTGCAATGAA+TGG | - | Chr7:91036010-91036029 | None:intergenic | 35.0% |
| !! | AATATGTACAGTGGTGTTGT+AGG | + | Chr7:91035203-91035222 | MsG0780041449.01.T01:CDS | 35.0% |
| !! | ATATGTACAGTGGTGTTGTA+GGG | + | Chr7:91035204-91035223 | MsG0780041449.01.T01:CDS | 35.0% |
| !! | CAGTTGGCTTGTTAATTTAG+AGG | + | Chr7:91034022-91034041 | MsG0780041449.01.T01:CDS | 35.0% |
| !!! | TTTTGATCGAGAAGGTGTTA+AGG | + | Chr7:91036428-91036447 | MsG0780041449.01.T01:CDS | 35.0% |
| AAACCATGTATCTTGCCTCT+CGG | - | Chr7:91036194-91036213 | None:intergenic | 40.0% | |
| AAGCTTCGTTATTGTGATGG+TGG | + | Chr7:91034458-91034477 | MsG0780041449.01.T01:CDS | 40.0% | |
| AATTCAGAGGACAGCGAATT+TGG | + | Chr7:91034857-91034876 | MsG0780041449.01.T01:CDS | 40.0% | |
| AATTTCGAGGTCTCTTTCCA+AGG | + | Chr7:91034986-91035005 | MsG0780041449.01.T01:CDS | 40.0% | |
| ACACTGGCAATCAAATTCTG+AGG | - | Chr7:91035574-91035593 | None:intergenic | 40.0% | |
| ACCCAGAAAAGTTTAGCCAT+TGG | - | Chr7:91033660-91033679 | None:intergenic | 40.0% | |
| AGAAACATTGTCATCGCCAA+TGG | + | Chr7:91033641-91033660 | MsG0780041449.01.T01:exon | 40.0% | |
| AGAAAGAAACAACACTCACC+AGG | - | Chr7:91033597-91033616 | None:intergenic | 40.0% | |
| AGCAGAAACTTGTAAGAGCA+AGG | + | Chr7:91034702-91034721 | MsG0780041449.01.T01:intron | 40.0% | |
| ATCCATATCCACGATGCAAA+TGG | - | Chr7:91033992-91034011 | None:intergenic | 40.0% | |
| ATTCAGAGGACAGCGAATTT+GGG | + | Chr7:91034858-91034877 | MsG0780041449.01.T01:CDS | 40.0% | |
| ATTTCTAACTGTCATCAGGG+AGG | + | Chr7:91034183-91034202 | MsG0780041449.01.T01:intron | 40.0% | |
| CAACACCACTGTACATATTC+CGG | - | Chr7:91035202-91035221 | None:intergenic | 40.0% | |
| CACAAAACGCAGAGAGTTTA+CGG | - | Chr7:91033541-91033560 | None:intergenic | 40.0% | |
| CACTGGCAATCAAATTCTGA+GGG | - | Chr7:91035573-91035592 | None:intergenic | 40.0% | |
| CACTTCACTTTAGTAGTCCT+TGG | - | Chr7:91035006-91035025 | None:intergenic | 40.0% | |
| CAGACAATTCTCCGGTTATT+AGG | + | Chr7:91036215-91036234 | MsG0780041449.01.T01:CDS | 40.0% | |
| CCACAAATCCAATTTCTGCA+AGG | + | Chr7:91035965-91035984 | MsG0780041449.01.T01:CDS | 40.0% | |
| CCTTGCAGAAATTGGATTTG+TGG | - | Chr7:91035968-91035987 | None:intergenic | 40.0% | |
| GAAAAGGAGATACCATTCAC+AGG | + | Chr7:91034276-91034295 | MsG0780041449.01.T01:CDS | 40.0% | |
| GACTGAATCTGATAACAAGG+AGG | - | Chr7:91035869-91035888 | None:intergenic | 40.0% | |
| GAGGGAAGAAACACTGAAAA+AGG | - | Chr7:91035555-91035574 | None:intergenic | 40.0% | |
| GCGTGGATCATCATTATACA+TGG | + | Chr7:91034254-91034273 | MsG0780041449.01.T01:CDS | 40.0% | |
| TAATCACCTTGATCCTACCT+CGG | + | Chr7:91035393-91035412 | MsG0780041449.01.T01:CDS | 40.0% | |
| TACCATTTGCATCGTGGATA+TGG | + | Chr7:91033987-91034006 | MsG0780041449.01.T01:CDS | 40.0% | |
| TACTGCTTATGATTCATGGC+AGG | + | Chr7:91035618-91035637 | MsG0780041449.01.T01:CDS | 40.0% | |
| TAGGTAACTGACTGACAAAC+TGG | + | Chr7:91034538-91034557 | MsG0780041449.01.T01:intron | 40.0% | |
| TATTACTATCACGGCACGTT+TGG | - | Chr7:91033500-91033519 | None:intergenic | 40.0% | |
| TGAACCCTGTATTCAAGAGA+CGG | - | Chr7:91036084-91036103 | None:intergenic | 40.0% | |
| TGGCTCAACTGAAAACCAAA+TGG | - | Chr7:91036491-91036510 | None:intergenic | 40.0% | |
| TGTGGCAGTAACACAAACAT+TGG | + | Chr7:91035712-91035731 | MsG0780041449.01.T01:intron | 40.0% | |
| TTCACTATTTGGGAATGCTG+AGG | + | Chr7:91036633-91036652 | MsG0780041449.01.T01:three_prime_UTR | 40.0% | |
| TTCTCCGGTTATTAGGAACA+AGG | + | Chr7:91036222-91036241 | MsG0780041449.01.T01:CDS | 40.0% | |
| ! | GCCAATGGCTAAACTTTTCT+GGG | + | Chr7:91033656-91033675 | MsG0780041449.01.T01:exon | 40.0% |
| ! | GGGAATGCATTTTGCTAATC+AGG | + | Chr7:91034909-91034928 | MsG0780041449.01.T01:CDS | 40.0% |
| !! | AGGACTTGTTATCACCAACT+TGG | + | Chr7:91033692-91033711 | MsG0780041449.01.T01:CDS | 40.0% |
| !!! | GACTGGTATTTTGATCGAGA+AGG | + | Chr7:91036420-91036439 | MsG0780041449.01.T01:CDS | 40.0% |
| AAAACGCAGAGAGTTTACGG+CGG | - | Chr7:91033538-91033557 | None:intergenic | 45.0% | |
| AAACAACACTCACCAGGAAG+AGG | - | Chr7:91033591-91033610 | None:intergenic | 45.0% | |
| AAACCGAGAGGCAAGATACA+TGG | + | Chr7:91036188-91036207 | MsG0780041449.01.T01:CDS | 45.0% | |
| AATGGAAATCCTCTGCTCGT+AGG | + | Chr7:91033825-91033844 | MsG0780041449.01.T01:CDS | 45.0% | |
| ACATGCAGCATCCTTTCTTG+AGG | + | Chr7:91033800-91033819 | MsG0780041449.01.T01:CDS | 45.0% | |
| ACCACTGTACATATTCCGGA+GGG | - | Chr7:91035198-91035217 | None:intergenic | 45.0% | |
| AGCAGCTGCATTGTGGATAA+GGG | - | Chr7:91033856-91033875 | None:intergenic | 45.0% | |
| AGTGTCGTGTCAATGCTACA+TGG | + | Chr7:91035800-91035819 | MsG0780041449.01.T01:intron | 45.0% | |
| ATCCACAATGCAGCTGCTAA+AGG | + | Chr7:91033858-91033877 | MsG0780041449.01.T01:CDS | 45.0% | |
| ATGGATCAGGAGCAAACAGT+TGG | + | Chr7:91034006-91034025 | MsG0780041449.01.T01:CDS | 45.0% | |
| ATGTATCTTGCCTCTCGGTT+TGG | - | Chr7:91036189-91036208 | None:intergenic | 45.0% | |
| CATCATAAGTATGCAGCCGT+AGG | + | Chr7:91036677-91036696 | MsG0780041449.01.T01:three_prime_UTR | 45.0% | |
| CATGCAGCATCCTTTCTTGA+GGG | + | Chr7:91033801-91033820 | MsG0780041449.01.T01:CDS | 45.0% | |
| CATTCATGCCAATAGCCATG+GGG | - | Chr7:91035917-91035936 | None:intergenic | 45.0% | |
| GAAGCAGAACTGCAATTCAG+AGG | + | Chr7:91034844-91034863 | MsG0780041449.01.T01:CDS | 45.0% | |
| GCATCCTTTCTTGAGGGTAA+TGG | + | Chr7:91033807-91033826 | MsG0780041449.01.T01:CDS | 45.0% | |
| GCATTCATGCCAATAGCCAT+GGG | - | Chr7:91035918-91035937 | None:intergenic | 45.0% | |
| GCTAATCAGGCTCTTCTTTC+CGG | + | Chr7:91034922-91034941 | MsG0780041449.01.T01:CDS | 45.0% | |
| GTCTCTTGAATACAGGGTTC+AGG | + | Chr7:91036083-91036102 | MsG0780041449.01.T01:intron | 45.0% | |
| TACTGGAGATGGTGAAGATC+AGG | + | Chr7:91034487-91034506 | MsG0780041449.01.T01:CDS | 45.0% | |
| TAGCAGCTGCATTGTGGATA+AGG | - | Chr7:91033857-91033876 | None:intergenic | 45.0% | |
| TCTTCTTTCCGGATGTTCAG+CGG | + | Chr7:91034933-91034952 | MsG0780041449.01.T01:CDS | 45.0% | |
| TGATTACCGAGGTAGGATCA+AGG | - | Chr7:91035402-91035421 | None:intergenic | 45.0% | |
| TGCATTCATGCCAATAGCCA+TGG | - | Chr7:91035919-91035938 | None:intergenic | 45.0% | |
| TGCTTGGATGGAACATTACC+TGG | + | Chr7:91033963-91033982 | MsG0780041449.01.T01:CDS | 45.0% | |
| TTCGCCGTCTCTTGAATACA+GGG | + | Chr7:91036077-91036096 | MsG0780041449.01.T01:intron | 45.0% | |
| TTGAGAGGAAAGGTGGAGAA+AGG | - | Chr7:91033915-91033934 | None:intergenic | 45.0% | |
| TTGCATCGTGGATATGGATC+AGG | + | Chr7:91033993-91034012 | MsG0780041449.01.T01:CDS | 45.0% | |
| TTGCTTTAGCTGTTGGAGAC+TGG | + | Chr7:91036403-91036422 | MsG0780041449.01.T01:CDS | 45.0% | |
| TTGGTTTCTTGCAGTGTGCT+TGG | + | Chr7:91033947-91033966 | MsG0780041449.01.T01:intron | 45.0% | |
| TTTCGCCGTCTCTTGAATAC+AGG | + | Chr7:91036076-91036095 | MsG0780041449.01.T01:intron | 45.0% | |
| TTTCTTGCAGTGTGCTTGGA+TGG | + | Chr7:91033951-91033970 | MsG0780041449.01.T01:intron | 45.0% | |
| ! | CGCCAATGGCTAAACTTTTC+TGG | + | Chr7:91033655-91033674 | MsG0780041449.01.T01:exon | 45.0% |
| ! | TGAAGTGTCTTAGCGATGCA+GGG | + | Chr7:91035019-91035038 | MsG0780041449.01.T01:CDS | 45.0% |
| !! | TGTGATGGTGGCTCATTTAC+TGG | + | Chr7:91034470-91034489 | MsG0780041449.01.T01:CDS | 45.0% |
| AAACGCAGAGAGTTTACGGC+GGG | - | Chr7:91033537-91033556 | None:intergenic | 50.0% | |
| AATGCAGCTGCTAAAGGAGC+AGG | + | Chr7:91033864-91033883 | MsG0780041449.01.T01:CDS | 50.0% | |
| ACCCTCCGGAATATGTACAG+TGG | + | Chr7:91035194-91035213 | MsG0780041449.01.T01:CDS | 50.0% | |
| CACCACTGTACATATTCCGG+AGG | - | Chr7:91035199-91035218 | None:intergenic | 50.0% | |
| CCACGATGCAAATGGTAACC+AGG | - | Chr7:91033984-91034003 | None:intergenic | 50.0% | |
| CCTGGTTACCATTTGCATCG+TGG | + | Chr7:91033981-91034000 | MsG0780041449.01.T01:CDS | 50.0% | |
| CGTATGTTGTCTGGTGAGAC+AGG | + | Chr7:91034822-91034841 | MsG0780041449.01.T01:intron | 50.0% | |
| CTCCTTTAGCAGCTGCATTG+TGG | - | Chr7:91033863-91033882 | None:intergenic | 50.0% | |
| CTTCTTTCCGGATGTTCAGC+GGG | + | Chr7:91034934-91034953 | MsG0780041449.01.T01:CDS | 50.0% | |
| GGTGGCTCATTTACTGGAGA+TGG | + | Chr7:91034476-91034495 | MsG0780041449.01.T01:CDS | 50.0% | |
| TATCGCAAGAAAACACGGCG+TGG | + | Chr7:91034237-91034256 | MsG0780041449.01.T01:CDS | 50.0% | |
| TCTAACTGTCATCAGGGAGG+TGG | + | Chr7:91034186-91034205 | MsG0780041449.01.T01:intron | 50.0% | |
| ! | GTGAAGTGTCTTAGCGATGC+AGG | + | Chr7:91035018-91035037 | MsG0780041449.01.T01:CDS | 50.0% |
| !! | GTGGCCTTGTGCATTTAGCA+TGG | - | Chr7:91035949-91035968 | None:intergenic | 50.0% |
| ACTGTCATCAGGGAGGTGGA+TGG | + | Chr7:91034190-91034209 | MsG0780041449.01.T01:intron | 55.0% | |
| CAGCAGATCCCCATGGCTAT+TGG | + | Chr7:91035906-91035925 | MsG0780041449.01.T01:CDS | 55.0% | |
| GCGAATTTGGGCAGCTGCAA+TGG | + | Chr7:91034870-91034889 | MsG0780041449.01.T01:CDS | 55.0% | |
| TAGCCATGGGGATCTGCTGA+TGG | - | Chr7:91035905-91035924 | None:intergenic | 55.0% | |
| !! | CAGTGGTGTTGTAGGGATGC+AGG | + | Chr7:91035211-91035230 | MsG0780041449.01.T01:CDS | 55.0% |
| AGGGTGAGTCCTACGAGCAG+AGG | - | Chr7:91033837-91033856 | None:intergenic | 60.0% | |
| CCATGGGGATCTGCTGATGG+AGG | - | Chr7:91035902-91035921 | None:intergenic | 60.0% | |
| CCTCCATCAGCAGATCCCCA+TGG | + | Chr7:91035899-91035918 | MsG0780041449.01.T01:CDS | 60.0% | |
| CTTTCCGGATGTTCAGCGGG+TGG | + | Chr7:91034937-91034956 | MsG0780041449.01.T01:CDS | 60.0% | |
| TAGGCCACCCGCTGAACATC+CGG | - | Chr7:91034944-91034963 | None:intergenic | 60.0% | |
| TCGCTCACTGCCAAACCGAG+AGG | + | Chr7:91036176-91036195 | MsG0780041449.01.T01:CDS | 60.0% | |
| TATCTGGCGAGCGCACCCTC+CGG | + | Chr7:91035180-91035199 | MsG0780041449.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 91033454 | 91036765 | 91033454 | ID=MsG0780041449.01;Name=MsG0780041449.01 |
| Chr7 | mRNA | 91033454 | 91036765 | 91033454 | ID=MsG0780041449.01.T01;Parent=MsG0780041449.01;Name=MsG0780041449.01.T01;_AED=0.30;_eAED=0.30;_QI=206|1|1|1|1|1|11|259|425 |
| Chr7 | exon | 91033454 | 91033885 | 91033454 | ID=MsG0780041449.01.T01:exon:3929;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91033961 | 91034043 | 91033961 | ID=MsG0780041449.01.T01:exon:3930;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91034201 | 91034330 | 91034201 | ID=MsG0780041449.01.T01:exon:3931;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91034435 | 91034508 | 91034435 | ID=MsG0780041449.01.T01:exon:3932;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91034844 | 91035055 | 91034844 | ID=MsG0780041449.01.T01:exon:3933;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91035172 | 91035232 | 91035172 | ID=MsG0780041449.01.T01:exon:3934;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91035361 | 91035414 | 91035361 | ID=MsG0780041449.01.T01:exon:3935;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91035562 | 91035639 | 91035562 | ID=MsG0780041449.01.T01:exon:3936;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91035881 | 91035986 | 91035881 | ID=MsG0780041449.01.T01:exon:3937;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91036098 | 91036243 | 91036098 | ID=MsG0780041449.01.T01:exon:3938;Parent=MsG0780041449.01.T01 |
| Chr7 | exon | 91036399 | 91036765 | 91036399 | ID=MsG0780041449.01.T01:exon:3939;Parent=MsG0780041449.01.T01 |
| Chr7 | five_prime_UTR | 91033454 | 91033659 | 91033454 | ID=MsG0780041449.01.T01:five_prime_utr;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91033660 | 91033885 | 91033660 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91033961 | 91034043 | 91033961 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91034201 | 91034330 | 91034201 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91034435 | 91034508 | 91034435 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91034844 | 91035055 | 91034844 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91035172 | 91035232 | 91035172 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91035361 | 91035414 | 91035361 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91035562 | 91035639 | 91035562 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91035881 | 91035986 | 91035881 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91036098 | 91036243 | 91036098 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | CDS | 91036399 | 91036506 | 91036399 | ID=MsG0780041449.01.T01:cds;Parent=MsG0780041449.01.T01 |
| Chr7 | three_prime_UTR | 91036507 | 91036765 | 91036507 | ID=MsG0780041449.01.T01:three_prime_utr;Parent=MsG0780041449.01.T01 |
| Gene Sequence |
| Protein sequence |
