Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015805.01.T01 | XP_003601260.2 | 98.81 | 336 | 4 | 0 | 1 | 336 | 1 | 336 | 0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015805.01.T01 | Q9FM03 | 42.748 | 393 | 145 | 23 | 1 | 334 | 1 | 372 | 7.15E-55 | 186 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015805.01.T01 | G7J5F5 | 98.810 | 336 | 4 | 0 | 1 | 336 | 1 | 336 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0380015805.01.T01 | TF | C2C2-Dof |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047974.01 | MsG0380015805.01 | 0.801604 | 8.327159e-49 | 3.993174e-46 |
| MsG0080048291.01 | MsG0380015805.01 | 0.823249 | 1.533458e-53 | 1.313250e-50 |
| MsG0080049140.01 | MsG0380015805.01 | 0.827391 | 1.605608e-54 | 1.548150e-51 |
| MsG0180000024.01 | MsG0380015805.01 | 0.851228 | 1.017121e-60 | 2.044847e-57 |
| MsG0180000983.01 | MsG0380015805.01 | 0.870769 | 1.135832e-66 | 4.471265e-63 |
| MsG0180004099.01 | MsG0380015805.01 | 0.885633 | 6.872786e-72 | 4.753209e-68 |
| MsG0180004101.01 | MsG0380015805.01 | 0.815664 | 8.235206e-52 | 5.713090e-49 |
| MsG0180004754.01 | MsG0380015805.01 | 0.833753 | 4.450658e-56 | 5.173915e-53 |
| MsG0180004970.01 | MsG0380015805.01 | 0.865706 | 4.861297e-65 | 1.596828e-61 |
| MsG0180005575.01 | MsG0380015805.01 | 0.803992 | 2.675555e-49 | 1.363857e-46 |
| MsG0180006024.01 | MsG0380015805.01 | 0.819791 | 9.648248e-53 | 7.498539e-50 |
| MsG0280006311.01 | MsG0380015805.01 | 0.825136 | 5.526636e-54 | 4.994582e-51 |
| MsG0280010554.01 | MsG0380015805.01 | 0.808930 | 2.430867e-50 | 1.407923e-47 |
| MsG0280010907.01 | MsG0380015805.01 | 0.806788 | 6.938682e-50 | 3.800024e-47 |
| MsG0280011003.01 | MsG0380015805.01 | 0.833385 | 5.497532e-56 | 6.321300e-53 |
| MsG0280011013.01 | MsG0380015805.01 | 0.823568 | 1.291171e-53 | 1.115827e-50 |
| MsG0280011014.01 | MsG0380015805.01 | 0.815861 | 7.440191e-52 | 5.189342e-49 |
| MsG0280011258.01 | MsG0380015805.01 | 0.831685 | 1.451090e-55 | 1.586355e-52 |
| MsG0280011282.01 | MsG0380015805.01 | 0.835648 | 1.484659e-56 | 1.826918e-53 |
| MsG0280011472.01 | MsG0380015805.01 | 0.809416 | 1.912881e-50 | 1.122494e-47 |
| MsG0380011640.01 | MsG0380015805.01 | 0.811028 | 8.593830e-51 | 5.262670e-48 |
| MsG0380011648.01 | MsG0380015805.01 | 0.809077 | 2.260889e-50 | 1.314719e-47 |
| MsG0380012471.01 | MsG0380015805.01 | 0.807193 | 5.697501e-50 | 3.153259e-47 |
| MsG0380013636.01 | MsG0380015805.01 | 0.827569 | 1.455253e-54 | 1.410132e-51 |
| MsG0380014289.01 | MsG0380015805.01 | 0.824508 | 7.769785e-54 | 6.896123e-51 |
| MsG0380015185.01 | MsG0380015805.01 | 0.827030 | 1.958756e-54 | 1.868552e-51 |
| MsG0380015190.01 | MsG0380015805.01 | 0.838253 | 3.209692e-57 | 4.274372e-54 |
| MsG0380015736.01 | MsG0380015805.01 | 0.814027 | 1.898298e-51 | 1.259652e-48 |
| MsG0380015805.01 | MsG0380016703.01 | 0.836777 | 7.669152e-57 | 9.764179e-54 |
| MsG0380015805.01 | MsG0380016994.01 | 0.813623 | 2.331162e-51 | 1.530016e-48 |
| MsG0380015805.01 | MsG0380017195.01 | 0.821839 | 3.262193e-53 | 2.684284e-50 |
| MsG0380015805.01 | MsG0380017391.01 | 0.800216 | 1.599047e-48 | 7.403865e-46 |
| MsG0380015805.01 | MsG0480018346.01 | 0.852382 | 4.788746e-61 | 9.988376e-58 |
| MsG0380015805.01 | MsG0480018397.01 | 0.815275 | 1.004696e-51 | 6.895982e-49 |
| MsG0380015805.01 | MsG0480018538.01 | 0.808066 | 3.717807e-50 | 2.104995e-47 |
| MsG0380015805.01 | MsG0480018919.01 | 0.806991 | 6.286001e-50 | 3.460697e-47 |
| MsG0380015805.01 | MsG0480019276.01 | 0.830959 | 2.188539e-55 | 2.341419e-52 |
| MsG0380015805.01 | MsG0480020495.01 | 0.829526 | 4.901609e-55 | 5.029422e-52 |
| MsG0380015805.01 | MsG0480022313.01 | 0.819939 | 8.922243e-53 | 6.962989e-50 |
| MsG0380015805.01 | MsG0480023130.01 | 0.847732 | 9.598760e-60 | 1.722254e-56 |
| MsG0380015805.01 | MsG0480023600.01 | 0.821917 | 3.128105e-53 | 2.579598e-50 |
| MsG0380015805.01 | MsG0480023832.01 | 0.805356 | 1.388682e-49 | 7.331569e-47 |
| MsG0380015805.01 | MsG0580024489.01 | 0.842807 | 2.064148e-58 | 3.165725e-55 |
| MsG0380015805.01 | MsG0580024506.01 | 0.838328 | 3.070231e-57 | 4.098091e-54 |
| MsG0380015805.01 | MsG0580024758.01 | 0.807510 | 4.880469e-50 | 2.723507e-47 |
| MsG0380015805.01 | MsG0580025766.01 | 0.853588 | 2.164367e-61 | 4.700360e-58 |
| MsG0380015805.01 | MsG0580026059.01 | 0.803465 | 3.441179e-49 | 1.730466e-46 |
| MsG0380015805.01 | MsG0580026307.01 | 0.833290 | 5.806923e-56 | 6.657716e-53 |
| MsG0380015805.01 | MsG0580026308.01 | 0.809222 | 2.105693e-50 | 1.229231e-47 |
| MsG0380015805.01 | MsG0580026309.01 | 0.818433 | 1.965692e-52 | 1.471287e-49 |
| MsG0380015805.01 | MsG0580026593.01 | 0.812610 | 3.888507e-51 | 2.483586e-48 |
| MsG0380015805.01 | MsG0580028176.01 | 0.812282 | 4.586283e-51 | 2.903920e-48 |
| MsG0380015805.01 | MsG0580029496.01 | 0.834415 | 3.036975e-56 | 3.601711e-53 |
| MsG0380015805.01 | MsG0580029640.01 | 0.848226 | 7.013004e-60 | 1.278117e-56 |
| MsG0380015805.01 | MsG0580029712.01 | 0.808050 | 3.746505e-50 | 2.120352e-47 |
| MsG0380015805.01 | MsG0580029825.01 | 0.833180 | 6.183472e-56 | 7.066362e-53 |
| MsG0380015805.01 | MsG0680030591.01 | 0.808141 | 3.583967e-50 | 2.033297e-47 |
| MsG0380015805.01 | MsG0680034598.01 | 0.807002 | 6.251982e-50 | 3.443022e-47 |
| MsG0380015805.01 | MsG0680034839.01 | 0.809056 | 2.284420e-50 | 1.327650e-47 |
| MsG0380015805.01 | MsG0680034842.01 | 0.808215 | 3.456229e-50 | 1.964677e-47 |
| MsG0380015805.01 | MsG0680034853.01 | 0.819871 | 9.247960e-53 | 7.203225e-50 |
| MsG0380015805.01 | MsG0680035346.01 | 0.804644 | 1.956747e-49 | 1.014270e-46 |
| MsG0380015805.01 | MsG0780036663.01 | 0.801430 | 9.036028e-49 | 4.314444e-46 |
| MsG0380015805.01 | MsG0780036752.01 | 0.824513 | 7.751265e-54 | 6.880585e-51 |
| MsG0380015805.01 | MsG0780038424.01 | 0.800322 | 1.521888e-48 | 7.065638e-46 |
| MsG0380015805.01 | MsG0780038803.01 | 0.803816 | 2.910107e-49 | 1.476710e-46 |
| MsG0380015805.01 | MsG0780039137.01 | 0.806029 | 1.003142e-49 | 5.388333e-47 |
| MsG0380015805.01 | MsG0780039697.01 | 0.806117 | 9.610755e-50 | 5.174050e-47 |
| MsG0380015805.01 | MsG0780040336.01 | 0.811608 | 6.429598e-51 | 3.997718e-48 |
| MsG0380015805.01 | MsG0780040841.01 | 0.822846 | 1.903858e-53 | 1.612166e-50 |
| MsG0380015805.01 | MsG0780040896.01 | 0.817501 | 3.190964e-52 | 2.327921e-49 |
| MsG0380015805.01 | MsG0780041063.01 | 0.802105 | 6.568586e-49 | 3.190380e-46 |
| MsG0380015805.01 | MsG0780041449.01 | 0.815187 | 1.051085e-51 | 7.196603e-49 |
| MsG0380015805.01 | MsG0780041506.01 | 0.834942 | 2.238191e-56 | 2.696677e-53 |
| MsG0380015805.01 | MsG0780041579.01 | 0.814507 | 1.487431e-51 | 9.999788e-49 |
| MsG0380015805.01 | MsG0780041667.01 | 0.831240 | 1.867149e-55 | 2.014169e-52 |
| MsG0380015805.01 | MsG0780041796.01 | 0.807723 | 4.397845e-50 | 2.467801e-47 |
| MsG0380015805.01 | MsG0880041860.01 | 0.824312 | 8.642981e-54 | 7.627280e-51 |
| MsG0380015805.01 | MsG0880041896.01 | 0.867498 | 1.309347e-65 | 4.581217e-62 |
| MsG0380015805.01 | MsG0880042311.01 | 0.814132 | 1.800251e-51 | 1.197959e-48 |
| MsG0380015805.01 | MsG0880042552.01 | 0.815160 | 1.066047e-51 | 7.293528e-49 |
| MsG0380015805.01 | MsG0880044041.01 | 0.848616 | 5.472691e-60 | 1.010049e-56 |
| MsG0380015805.01 | MsG0880044952.01 | 0.807058 | 6.084652e-50 | 3.355702e-47 |
| MsG0380015805.01 | MsG0880045145.01 | 0.801350 | 9.383566e-49 | 4.471415e-46 |
| MsG0380015805.01 | MsG0880047226.01 | 0.824783 | 6.693618e-54 | 5.988614e-51 |
| MsG0380015805.01 | MsG0880047472.01 | 0.811135 | 8.144045e-51 | 5.001152e-48 |
| MsG0380015805.01 | MsG0880047666.01 | 0.818738 | 1.675550e-52 | 1.264643e-49 |
| MsG0280006591.01 | MsG0380015805.01 | 0.849023 | 4.219647e-60 | 7.893327e-57 |
| MsG0280007452.01 | MsG0380015805.01 | 0.802801 | 4.720599e-49 | 2.333975e-46 |
| MsG0280008280.01 | MsG0380015805.01 | 0.804895 | 1.733968e-49 | 9.047528e-47 |
| MsG0280008321.01 | MsG0380015805.01 | 0.804228 | 2.388616e-49 | 1.224910e-46 |
| MsG0280008909.01 | MsG0380015805.01 | 0.832025 | 1.196014e-55 | 1.320658e-52 |
| MsG0280009234.01 | MsG0380015805.01 | 0.845305 | 4.413439e-59 | 7.323531e-56 |
| MsG0280009493.01 | MsG0380015805.01 | 0.831049 | 2.080023e-55 | 2.231330e-52 |
| MsG0280010491.01 | MsG0380015805.01 | 0.808658 | 2.779151e-50 | 1.598151e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015805.01.T01 | MTR_3g077750 | 98.810 | 336 | 4 | 0 | 1 | 336 | 1 | 336 | 0.0 | 689 |
| MsG0380015805.01.T01 | MTR_3g091820 | 34.320 | 338 | 153 | 17 | 17 | 324 | 5 | 303 | 2.62e-40 | 144 |
| MsG0380015805.01.T01 | MTR_4g461080 | 55.039 | 129 | 42 | 3 | 39 | 159 | 9 | 129 | 4.39e-36 | 132 |
| MsG0380015805.01.T01 | MTR_2g093220 | 54.331 | 127 | 45 | 4 | 38 | 155 | 19 | 141 | 1.33e-35 | 131 |
| MsG0380015805.01.T01 | MTR_8g027295 | 52.800 | 125 | 44 | 4 | 45 | 158 | 10 | 130 | 2.14e-35 | 130 |
| MsG0380015805.01.T01 | MTR_4g063780 | 58.491 | 106 | 37 | 3 | 44 | 142 | 55 | 160 | 2.84e-34 | 128 |
| MsG0380015805.01.T01 | MTR_2g096740 | 72.603 | 73 | 18 | 1 | 50 | 122 | 51 | 121 | 9.63e-34 | 126 |
| MsG0380015805.01.T01 | MTR_2g096740 | 72.603 | 73 | 18 | 1 | 50 | 122 | 66 | 136 | 1.02e-33 | 126 |
| MsG0380015805.01.T01 | MTR_1g077600 | 53.125 | 128 | 46 | 5 | 41 | 163 | 25 | 143 | 1.75e-33 | 125 |
| MsG0380015805.01.T01 | MTR_1g077600 | 53.125 | 128 | 46 | 5 | 41 | 163 | 25 | 143 | 1.86e-33 | 125 |
| MsG0380015805.01.T01 | MTR_8g479350 | 66.197 | 71 | 24 | 0 | 61 | 131 | 68 | 138 | 3.86e-31 | 120 |
| MsG0380015805.01.T01 | MTR_4g022370 | 69.333 | 75 | 20 | 2 | 44 | 115 | 62 | 136 | 1.30e-30 | 119 |
| MsG0380015805.01.T01 | MTR_7g059400 | 60.870 | 92 | 29 | 3 | 27 | 115 | 43 | 130 | 5.23e-30 | 117 |
| MsG0380015805.01.T01 | MTR_7g024670 | 56.122 | 98 | 27 | 3 | 34 | 115 | 34 | 131 | 1.10e-29 | 117 |
| MsG0380015805.01.T01 | MTR_8g068210 | 67.164 | 67 | 22 | 0 | 50 | 116 | 21 | 87 | 1.13e-29 | 116 |
| MsG0380015805.01.T01 | MTR_3g090430 | 71.875 | 64 | 18 | 0 | 52 | 115 | 42 | 105 | 1.20e-29 | 116 |
| MsG0380015805.01.T01 | MTR_2g014060 | 77.049 | 61 | 14 | 0 | 52 | 112 | 16 | 76 | 1.81e-29 | 115 |
| MsG0380015805.01.T01 | MTR_4g088580 | 81.818 | 55 | 10 | 0 | 62 | 116 | 56 | 110 | 2.40e-29 | 116 |
| MsG0380015805.01.T01 | MTR_8g079060 | 55.319 | 94 | 35 | 2 | 52 | 141 | 16 | 106 | 1.54e-28 | 110 |
| MsG0380015805.01.T01 | MTR_5g031440 | 78.571 | 56 | 12 | 0 | 56 | 111 | 38 | 93 | 1.61e-28 | 113 |
| MsG0380015805.01.T01 | MTR_1g056810 | 71.212 | 66 | 19 | 0 | 59 | 124 | 10 | 75 | 3.37e-28 | 111 |
| MsG0380015805.01.T01 | MTR_8g015840 | 74.603 | 63 | 16 | 0 | 56 | 118 | 15 | 77 | 8.88e-28 | 108 |
| MsG0380015805.01.T01 | MTR_4g109980 | 84.314 | 51 | 8 | 0 | 61 | 111 | 40 | 90 | 8.49e-27 | 108 |
| MsG0380015805.01.T01 | MTR_2g014170 | 84.000 | 50 | 8 | 0 | 60 | 109 | 44 | 93 | 5.29e-26 | 105 |
| MsG0380015805.01.T01 | MTR_2g059540 | 82.353 | 51 | 9 | 0 | 59 | 109 | 29 | 79 | 9.49e-26 | 102 |
| MsG0380015805.01.T01 | MTR_3g435480 | 66.667 | 69 | 22 | 1 | 50 | 118 | 126 | 193 | 1.57e-25 | 106 |
| MsG0380015805.01.T01 | MTR_2g013370 | 47.458 | 118 | 42 | 5 | 1 | 116 | 1 | 100 | 2.83e-25 | 103 |
| MsG0380015805.01.T01 | MTR_4g089095 | 76.786 | 56 | 12 | 1 | 61 | 116 | 16 | 70 | 3.26e-25 | 102 |
| MsG0380015805.01.T01 | MTR_4g089095 | 76.786 | 56 | 12 | 1 | 61 | 116 | 50 | 104 | 3.42e-25 | 103 |
| MsG0380015805.01.T01 | MTR_7g010950 | 43.697 | 119 | 59 | 2 | 25 | 136 | 93 | 210 | 5.06e-24 | 102 |
| MsG0380015805.01.T01 | MTR_4g082060 | 60.870 | 69 | 26 | 1 | 50 | 118 | 112 | 179 | 6.06e-24 | 102 |
| MsG0380015805.01.T01 | MTR_6g012450 | 44.545 | 110 | 54 | 1 | 30 | 132 | 98 | 207 | 7.72e-24 | 102 |
| MsG0380015805.01.T01 | MTR_7g086780 | 42.342 | 111 | 58 | 2 | 20 | 130 | 64 | 168 | 1.62e-23 | 100 |
| MsG0380015805.01.T01 | MTR_6g027450 | 42.478 | 113 | 57 | 4 | 7 | 119 | 43 | 147 | 3.11e-23 | 98.6 |
| MsG0380015805.01.T01 | MTR_8g044220 | 53.333 | 75 | 34 | 1 | 41 | 115 | 99 | 172 | 6.24e-23 | 99.4 |
| MsG0380015805.01.T01 | MTR_6g027460 | 50.617 | 81 | 39 | 1 | 50 | 130 | 86 | 165 | 9.19e-23 | 97.8 |
| MsG0380015805.01.T01 | MTR_5g041420 | 41.600 | 125 | 55 | 3 | 12 | 118 | 71 | 195 | 3.71e-22 | 95.5 |
| MsG0380015805.01.T01 | MTR_2g016030 | 66.667 | 54 | 18 | 0 | 61 | 114 | 47 | 100 | 4.83e-22 | 91.3 |
| MsG0380015805.01.T01 | MTR_5g041530 | 63.793 | 58 | 21 | 0 | 57 | 114 | 136 | 193 | 1.98e-20 | 91.3 |
| MsG0380015805.01.T01 | MTR_5g041400 | 45.161 | 93 | 47 | 1 | 26 | 114 | 80 | 172 | 4.08e-20 | 90.5 |
| MsG0380015805.01.T01 | MTR_5g041380 | 68.519 | 54 | 17 | 0 | 61 | 114 | 127 | 180 | 9.28e-20 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015805.01.T01 | AT5G62940 | 42.748 | 393 | 145 | 23 | 1 | 334 | 1 | 372 | 7.29e-56 | 186 |
| MsG0380015805.01.T01 | AT5G60200 | 66.292 | 89 | 27 | 3 | 33 | 121 | 30 | 115 | 2.44e-35 | 129 |
| MsG0380015805.01.T01 | AT1G51700 | 47.656 | 128 | 54 | 2 | 56 | 170 | 28 | 155 | 7.32e-33 | 121 |
| MsG0380015805.01.T01 | AT2G28510 | 56.364 | 110 | 35 | 2 | 63 | 160 | 50 | 158 | 5.37e-32 | 121 |
| MsG0380015805.01.T01 | AT3G45610 | 43.373 | 166 | 68 | 7 | 54 | 212 | 32 | 178 | 2.45e-31 | 118 |
| MsG0380015805.01.T01 | AT4G24060 | 50.000 | 122 | 46 | 2 | 50 | 156 | 42 | 163 | 2.83e-31 | 120 |
| MsG0380015805.01.T01 | AT5G02460 | 70.667 | 75 | 19 | 2 | 44 | 115 | 75 | 149 | 5.09e-31 | 121 |
| MsG0380015805.01.T01 | AT3G55370 | 65.000 | 80 | 25 | 2 | 43 | 119 | 55 | 134 | 7.26e-31 | 119 |
| MsG0380015805.01.T01 | AT3G55370 | 65.000 | 80 | 25 | 2 | 43 | 119 | 55 | 134 | 9.36e-31 | 119 |
| MsG0380015805.01.T01 | AT3G55370 | 65.000 | 80 | 25 | 2 | 43 | 119 | 100 | 179 | 1.34e-30 | 119 |
| MsG0380015805.01.T01 | AT2G37590 | 64.474 | 76 | 24 | 1 | 44 | 116 | 69 | 144 | 1.74e-30 | 118 |
| MsG0380015805.01.T01 | AT1G07640 | 69.444 | 72 | 19 | 1 | 47 | 115 | 4 | 75 | 6.45e-30 | 115 |
| MsG0380015805.01.T01 | AT5G60850 | 66.234 | 77 | 20 | 1 | 50 | 120 | 34 | 110 | 6.56e-30 | 116 |
| MsG0380015805.01.T01 | AT1G07640 | 69.444 | 72 | 19 | 1 | 47 | 115 | 60 | 131 | 1.18e-29 | 116 |
| MsG0380015805.01.T01 | AT1G07640 | 69.444 | 72 | 19 | 1 | 47 | 115 | 68 | 139 | 1.28e-29 | 116 |
| MsG0380015805.01.T01 | AT1G64620 | 52.672 | 131 | 47 | 3 | 45 | 164 | 33 | 159 | 1.67e-29 | 116 |
| MsG0380015805.01.T01 | AT3G61850 | 65.753 | 73 | 23 | 1 | 46 | 118 | 49 | 119 | 3.60e-29 | 114 |
| MsG0380015805.01.T01 | AT3G61850 | 65.753 | 73 | 23 | 1 | 46 | 118 | 49 | 119 | 3.60e-29 | 114 |
| MsG0380015805.01.T01 | AT5G65590 | 62.963 | 81 | 25 | 1 | 35 | 115 | 20 | 95 | 3.83e-29 | 114 |
| MsG0380015805.01.T01 | AT3G61850 | 65.753 | 73 | 23 | 1 | 46 | 118 | 61 | 131 | 4.49e-29 | 114 |
| MsG0380015805.01.T01 | AT3G61850 | 65.753 | 73 | 23 | 1 | 46 | 118 | 49 | 119 | 6.24e-29 | 114 |
| MsG0380015805.01.T01 | AT3G61850 | 65.753 | 73 | 23 | 1 | 46 | 118 | 61 | 131 | 6.47e-29 | 114 |
| MsG0380015805.01.T01 | AT3G52440 | 68.182 | 66 | 21 | 0 | 58 | 123 | 22 | 87 | 1.10e-28 | 111 |
| MsG0380015805.01.T01 | AT1G28310 | 82.143 | 56 | 10 | 0 | 61 | 116 | 27 | 82 | 1.36e-28 | 112 |
| MsG0380015805.01.T01 | AT3G52440 | 68.182 | 66 | 21 | 0 | 58 | 123 | 41 | 106 | 2.06e-28 | 111 |
| MsG0380015805.01.T01 | AT1G28310 | 82.143 | 56 | 10 | 0 | 61 | 116 | 51 | 106 | 2.16e-28 | 112 |
| MsG0380015805.01.T01 | AT1G21340 | 69.444 | 72 | 19 | 1 | 63 | 134 | 40 | 108 | 3.13e-28 | 110 |
| MsG0380015805.01.T01 | AT3G21270 | 54.717 | 106 | 42 | 3 | 61 | 164 | 29 | 130 | 5.03e-28 | 108 |
| MsG0380015805.01.T01 | AT4G21050 | 59.551 | 89 | 33 | 2 | 54 | 142 | 19 | 104 | 5.78e-28 | 108 |
| MsG0380015805.01.T01 | AT2G28810 | 65.152 | 66 | 22 | 1 | 47 | 112 | 64 | 128 | 5.95e-28 | 111 |
| MsG0380015805.01.T01 | AT2G28810 | 65.152 | 66 | 22 | 1 | 47 | 112 | 81 | 145 | 1.07e-27 | 111 |
| MsG0380015805.01.T01 | AT4G00940 | 53.398 | 103 | 31 | 2 | 63 | 151 | 70 | 169 | 8.91e-27 | 107 |
| MsG0380015805.01.T01 | AT4G00940 | 53.398 | 103 | 31 | 2 | 63 | 151 | 70 | 169 | 8.91e-27 | 107 |
| MsG0380015805.01.T01 | AT4G00940 | 53.398 | 103 | 31 | 2 | 63 | 151 | 70 | 169 | 8.91e-27 | 107 |
| MsG0380015805.01.T01 | AT2G46590 | 55.682 | 88 | 36 | 2 | 22 | 108 | 30 | 115 | 2.75e-26 | 107 |
| MsG0380015805.01.T01 | AT4G38000 | 60.256 | 78 | 30 | 1 | 41 | 117 | 21 | 98 | 2.76e-26 | 105 |
| MsG0380015805.01.T01 | AT2G46590 | 55.682 | 88 | 36 | 2 | 22 | 108 | 42 | 127 | 3.03e-26 | 107 |
| MsG0380015805.01.T01 | AT3G50410 | 75.439 | 57 | 14 | 0 | 61 | 117 | 30 | 86 | 7.36e-26 | 104 |
| MsG0380015805.01.T01 | AT5G66940 | 70.968 | 62 | 18 | 0 | 61 | 122 | 32 | 93 | 1.08e-25 | 103 |
| MsG0380015805.01.T01 | AT1G47655 | 73.684 | 57 | 13 | 1 | 55 | 109 | 21 | 77 | 6.23e-25 | 100 |
| MsG0380015805.01.T01 | AT3G47500 | 63.235 | 68 | 24 | 1 | 51 | 118 | 101 | 167 | 5.06e-24 | 102 |
| MsG0380015805.01.T01 | AT5G62430 | 46.087 | 115 | 48 | 3 | 50 | 164 | 44 | 144 | 6.53e-24 | 100 |
| MsG0380015805.01.T01 | AT5G39660 | 63.768 | 69 | 24 | 1 | 50 | 118 | 128 | 195 | 1.00e-23 | 101 |
| MsG0380015805.01.T01 | AT5G39660 | 63.768 | 69 | 24 | 1 | 50 | 118 | 128 | 195 | 1.00e-23 | 101 |
| MsG0380015805.01.T01 | AT5G39660 | 63.768 | 69 | 24 | 1 | 50 | 118 | 128 | 195 | 1.00e-23 | 101 |
| MsG0380015805.01.T01 | AT1G69570 | 64.516 | 62 | 21 | 1 | 53 | 114 | 125 | 185 | 3.99e-23 | 99.4 |
| MsG0380015805.01.T01 | AT1G29160 | 60.000 | 70 | 26 | 1 | 45 | 114 | 48 | 115 | 4.67e-23 | 94.7 |
| MsG0380015805.01.T01 | AT2G34140 | 47.253 | 91 | 36 | 1 | 24 | 114 | 33 | 111 | 1.49e-22 | 93.2 |
| MsG0380015805.01.T01 | AT4G21040 | 57.971 | 69 | 29 | 0 | 63 | 131 | 27 | 95 | 4.27e-22 | 93.6 |
| MsG0380015805.01.T01 | AT1G26790 | 51.852 | 81 | 38 | 1 | 52 | 132 | 103 | 182 | 8.29e-22 | 95.1 |
| MsG0380015805.01.T01 | AT4G21080 | 56.000 | 75 | 30 | 1 | 63 | 134 | 27 | 101 | 4.41e-21 | 91.3 |
| MsG0380015805.01.T01 | AT4G21030 | 55.556 | 63 | 25 | 1 | 50 | 112 | 13 | 72 | 6.90e-15 | 72.8 |
Find 113 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTTGTTCTCCATGAAATT+AGG | 0.146876 | 3:+75264102 | None:intergenic |
| AGTAAGTTAGAAGGCATAAT+TGG | 0.168612 | 3:-75264027 | MsG0380015805.01.T01:CDS |
| TCTCACCTAAGTAACTTATT+TGG | 0.188613 | 3:-75264147 | MsG0380015805.01.T01:CDS |
| TAGCAATGGTGCTTATTTAA+TGG | 0.193039 | 3:-75263845 | MsG0380015805.01.T01:CDS |
| AAAGAAAGCTGAAGATCTTT+AGG | 0.209545 | 3:+75264186 | None:intergenic |
| CATTCAAGTGACAATAGTTT+AGG | 0.231938 | 3:+75263745 | None:intergenic |
| TGCCTTGGTGTGTTTCCTTT+TGG | 0.256108 | 3:-75263370 | MsG0380015805.01.T01:three_prime_UTR |
| TTTGGTGGAATGTCATTTAA+TGG | 0.272373 | 3:-75263877 | MsG0380015805.01.T01:CDS |
| ACTTGTTCTCCATGAAATTA+GGG | 0.276978 | 3:+75264103 | None:intergenic |
| GATATGATGAATGGACAAAA+TGG | 0.284919 | 3:-75263925 | MsG0380015805.01.T01:CDS |
| TTTGGAGCTAATGGAGCATT+AGG | 0.302981 | 3:-75264129 | MsG0380015805.01.T01:CDS |
| TGATCATATGAATATGAATA+TGG | 0.304551 | 3:-75263965 | MsG0380015805.01.T01:CDS |
| AGTAACTTATTTGGAGCTAA+TGG | 0.308114 | 3:-75264138 | MsG0380015805.01.T01:CDS |
| GTTCCTAAGTGTTCCTCCTT+TGG | 0.313562 | 3:+75264329 | None:intergenic |
| TTCTCTTCACGTCTGCAATA+TGG | 0.315298 | 3:-75265067 | MsG0380015805.01.T01:CDS |
| ATTCAAGTGACAATAGTTTA+GGG | 0.332848 | 3:+75263746 | None:intergenic |
| AAGAAAGCTGAAGATCTTTA+GGG | 0.336634 | 3:+75264187 | None:intergenic |
| ACACACCAAGGCAGTAGATT+TGG | 0.347710 | 3:+75263380 | None:intergenic |
| ATGAATATGGGTGTTGGGAT+TGG | 0.368536 | 3:-75263952 | MsG0380015805.01.T01:CDS |
| GCATAATTGGGAGTAGTTCT+AGG | 0.373441 | 3:-75264014 | MsG0380015805.01.T01:CDS |
| CTTTCCATCATGAAGTCAAT+AGG | 0.377139 | 3:+75264048 | None:intergenic |
| GTTGTTGTAATAGCAGAATT+TGG | 0.387536 | 3:+75264404 | None:intergenic |
| TTTCTACAGCCTCCACCAAC+AGG | 0.392353 | 3:+75264303 | None:intergenic |
| AAAGGTCAGTCATTTGGATA+TGG | 0.392934 | 3:-75263691 | MsG0380015805.01.T01:CDS |
| GCAAGACTTGTAGAAGGTAT+TGG | 0.393470 | 3:-75264353 | MsG0380015805.01.T01:CDS |
| AAAGTGATTGATTAGGTCAT+TGG | 0.395429 | 3:+75263578 | None:intergenic |
| GCTGGAAAAGGTCAGTCATT+TGG | 0.395618 | 3:-75263697 | MsG0380015805.01.T01:CDS |
| ATTAGGAAACCCTAATTTCA+TGG | 0.397565 | 3:-75264112 | MsG0380015805.01.T01:CDS |
| CGACACGTCATGGAAGCTTT+AGG | 0.404008 | 3:-75263317 | MsG0380015805.01.T01:three_prime_UTR |
| AGTGACAATAGTTTAGGGTT+TGG | 0.405871 | 3:+75263751 | None:intergenic |
| TCCTCATCATTAGCATCATA+TGG | 0.425855 | 3:+75263799 | None:intergenic |
| GTAAGTTAGAAGGCATAATT+GGG | 0.426365 | 3:-75264026 | MsG0380015805.01.T01:CDS |
| GCGTTTCTTTCTATAAATCA+AGG | 0.427761 | 3:-75263469 | MsG0380015805.01.T01:three_prime_UTR |
| TGTTAAGTGAGAAGAGATAG+AGG | 0.437368 | 3:+75265247 | None:intergenic |
| TATGAAGAAAGTGATTGATT+AGG | 0.437988 | 3:+75263571 | None:intergenic |
| TAGCTCCAAATAAGTTACTT+AGG | 0.442973 | 3:+75264142 | None:intergenic |
| AGGTGAGAGAATTGCACATC+AGG | 0.445358 | 3:+75264162 | None:intergenic |
| ATCTGCAGATCATTGGTTGC+AGG | 0.446436 | 3:-75265040 | MsG0380015805.01.T01:intron |
| ATGTAACATCGAGGAAGATA+TGG | 0.449127 | 3:-75263278 | MsG0380015805.01.T01:three_prime_UTR |
| ATATACATAAAGTCTTTGTA+TGG | 0.454485 | 3:-75263533 | MsG0380015805.01.T01:three_prime_UTR |
| TCTTAGCCTCCTCTCTATCA+TGG | 0.458753 | 3:+75264476 | None:intergenic |
| GATCAAGGTTGCTCTGATGC+TGG | 0.462649 | 3:-75263715 | MsG0380015805.01.T01:CDS |
| ATGATGGAAAGTAAGTTAGA+AGG | 0.467778 | 3:-75264036 | MsG0380015805.01.T01:CDS |
| TGGAATCATCTGCAGATCAT+TGG | 0.469488 | 3:-75265047 | MsG0380015805.01.T01:CDS |
| GAGCTTAGCCGTTGATCAAA+GGG | 0.477519 | 3:+75263623 | None:intergenic |
| AGTGGTATGATGAATGGTTA+TGG | 0.480178 | 3:-75263661 | MsG0380015805.01.T01:CDS |
| TTCACACTCGACCCATCTCT+TGG | 0.480929 | 3:+75263419 | None:intergenic |
| AATATGGGTGTTGGGATTGG+AGG | 0.481246 | 3:-75263949 | MsG0380015805.01.T01:CDS |
| GGTTGCTCTGATGCTGGAAA+AGG | 0.482324 | 3:-75263709 | MsG0380015805.01.T01:CDS |
| GGCACAATTCACGATGAGTC+AGG | 0.484101 | 3:-75264555 | MsG0380015805.01.T01:CDS |
| GATTCATCTTCACCAATGTC+TGG | 0.489933 | 3:-75264528 | MsG0380015805.01.T01:CDS |
| CATAAAGTCTTTGTATGGGA+GGG | 0.490896 | 3:-75263528 | MsG0380015805.01.T01:three_prime_UTR |
| CTTGATCACAACTCTGAGCT+TGG | 0.491446 | 3:-75265108 | MsG0380015805.01.T01:five_prime_UTR |
| GAGAACAAGTATAGCAATGT+TGG | 0.493849 | 3:-75264090 | MsG0380015805.01.T01:CDS |
| CTCCTCTCTATCATGGATGA+TGG | 0.495201 | 3:+75264483 | None:intergenic |
| ACTTCTGCAAGACTTGTAGA+AGG | 0.495701 | 3:-75264359 | MsG0380015805.01.T01:CDS |
| AGAGCTTAGCCGTTGATCAA+AGG | 0.500555 | 3:+75263622 | None:intergenic |
| CTAAACTATTGTCACTTGAA+TGG | 0.500804 | 3:-75263744 | MsG0380015805.01.T01:CDS |
| CTTGAATGGCAGCAAGATCA+AGG | 0.502791 | 3:-75263730 | MsG0380015805.01.T01:CDS |
| ATGAATATGAATATGGGTGT+TGG | 0.503188 | 3:-75263958 | MsG0380015805.01.T01:CDS |
| AGTCATTTGGATATGGATCA+TGG | 0.505387 | 3:-75263684 | MsG0380015805.01.T01:CDS |
| GTGACATGCTAACATGTTCA+AGG | 0.508689 | 3:-75264506 | MsG0380015805.01.T01:CDS |
| TCTTTGTGTGCGACACGTCA+TGG | 0.513722 | 3:-75263327 | MsG0380015805.01.T01:three_prime_UTR |
| TGAATATGAATATGGGTGTT+GGG | 0.514370 | 3:-75263957 | MsG0380015805.01.T01:CDS |
| ATCATGAAGTCAATAGGCCT+AGG | 0.516098 | 3:+75264054 | None:intergenic |
| ACATATTTATATAATCCAAA+AGG | 0.528989 | 3:+75263355 | None:intergenic |
| TTGTGATCAAGCAGTGTAGT+TGG | 0.535204 | 3:+75265120 | None:intergenic |
| CGTTTCTTTCTATAAATCAA+GGG | 0.539763 | 3:-75263468 | MsG0380015805.01.T01:three_prime_UTR |
| ATCCGAGAAGAAAATGAAAG+AGG | 0.539774 | 3:+75265207 | None:intergenic |
| AGAAGAAAATGAAAGAGGAT+AGG | 0.545528 | 3:+75265212 | None:intergenic |
| CTACTGAATTAACCAAGAGA+TGG | 0.548579 | 3:-75263431 | MsG0380015805.01.T01:three_prime_UTR |
| CTTAGGAACATCCCTGTTGG+TGG | 0.550577 | 3:-75264315 | MsG0380015805.01.T01:CDS |
| GGTGGAATGTCATTTAATGG+AGG | 0.555147 | 3:-75263874 | MsG0380015805.01.T01:CDS |
| CAAGTCTTGCAGAAGTACCT+TGG | 0.558008 | 3:+75264366 | None:intergenic |
| AGGAACATCCCTGTTGGTGG+AGG | 0.558859 | 3:-75264312 | MsG0380015805.01.T01:CDS |
| TATACATAAAGTCTTTGTAT+GGG | 0.559157 | 3:-75263532 | MsG0380015805.01.T01:three_prime_UTR |
| CATGTGTTTGTGTTGTGTTG+TGG | 0.559484 | 3:+75265294 | None:intergenic |
| AGAGTCCAAATCTACTGCCT+TGG | 0.559695 | 3:-75263385 | MsG0380015805.01.T01:three_prime_UTR |
| TACTGAATTAACCAAGAGAT+GGG | 0.562851 | 3:-75263430 | MsG0380015805.01.T01:three_prime_UTR |
| ACAACAAACCCTTTGATCAA+CGG | 0.565654 | 3:-75263631 | MsG0380015805.01.T01:CDS |
| ATATGATGAATGGACAAAAT+GGG | 0.566744 | 3:-75263924 | MsG0380015805.01.T01:CDS |
| ATTGGAGGAGATATGATGAA+TGG | 0.570060 | 3:-75263934 | MsG0380015805.01.T01:CDS |
| ACATAAAGTCTTTGTATGGG+AGG | 0.575556 | 3:-75263529 | MsG0380015805.01.T01:three_prime_UTR |
| ACCTATCCCTAAAATGTCCA+AGG | 0.579764 | 3:-75264443 | MsG0380015805.01.T01:CDS |
| GATCATATGAATATGAATAT+GGG | 0.580380 | 3:-75263964 | MsG0380015805.01.T01:CDS |
| TAGGCCTATTGACTTCATGA+TGG | 0.581168 | 3:-75264052 | MsG0380015805.01.T01:CDS |
| TCATGGAGTGGTATGATGAA+TGG | 0.582721 | 3:-75263667 | MsG0380015805.01.T01:CDS |
| TGTAGAAGGTATTGGACCAA+AGG | 0.594254 | 3:-75264345 | MsG0380015805.01.T01:CDS |
| AATTCACGATGAGTCAGGAA+TGG | 0.596611 | 3:-75264550 | MsG0380015805.01.T01:CDS |
| GTTATTGTCATTGCATTGCA+AGG | 0.598961 | 3:+75265180 | None:intergenic |
| GGACCAAAGGAGGAACACTT+AGG | 0.599656 | 3:-75264332 | MsG0380015805.01.T01:CDS |
| AATGCATGATGAAAATTCTG+AGG | 0.599697 | 3:+75263898 | None:intergenic |
| AATGGAGGAAACAATAGCAA+TGG | 0.607650 | 3:-75263859 | MsG0380015805.01.T01:CDS |
| AGGAAGGTACATGATGTGGT+TGG | 0.607867 | 3:+75264220 | None:intergenic |
| TCATGAAGTCAATAGGCCTA+GGG | 0.612063 | 3:+75264055 | None:intergenic |
| GGCCATCATCCATGATAGAG+AGG | 0.614387 | 3:-75264485 | MsG0380015805.01.T01:CDS |
| GTTTCTTTCTATAAATCAAG+GGG | 0.615214 | 3:-75263467 | MsG0380015805.01.T01:three_prime_UTR |
| GGTGAGAGAATTGCACATCA+GGG | 0.615522 | 3:+75264163 | None:intergenic |
| TTGGCATGCTTGAAAACCCT+AGG | 0.618350 | 3:-75264071 | MsG0380015805.01.T01:CDS |
| AGAAGGTATTGGACCAAAGG+AGG | 0.622045 | 3:-75264342 | MsG0380015805.01.T01:CDS |
| GTTAGCATGTCACCAGACAT+TGG | 0.624948 | 3:+75264516 | None:intergenic |
| TTCTACAGCCTCCACCAACA+GGG | 0.626747 | 3:+75264304 | None:intergenic |
| TGGTAGGAAGGTACATGATG+TGG | 0.632743 | 3:+75264216 | None:intergenic |
| ACACTTAGGAACATCCCTGT+TGG | 0.646210 | 3:-75264318 | MsG0380015805.01.T01:CDS |
| TTTGGATATGGATCATGGAG+TGG | 0.646639 | 3:-75263679 | MsG0380015805.01.T01:CDS |
| GTTGATCAAAGGGTTTGTTG+TGG | 0.647747 | 3:+75263633 | None:intergenic |
| TTTAGGGATAGGTCATGTGG+TGG | 0.663306 | 3:+75264453 | None:intergenic |
| ACTACAGTCTCTCTCAGCCA+AGG | 0.663924 | 3:-75264383 | MsG0380015805.01.T01:CDS |
| GTGTGAGTTGAATCACACCT+TGG | 0.665322 | 3:+75264426 | None:intergenic |
| TCCATATGATGCTAATGATG+AGG | 0.665364 | 3:-75263800 | MsG0380015805.01.T01:CDS |
| CATCATCCATGATAGAGAGG+AGG | 0.679330 | 3:-75264482 | MsG0380015805.01.T01:CDS |
| ATCCAAAAGGAAACACACCA+AGG | 0.706145 | 3:+75263368 | None:intergenic |
| TATGCTGTAATGTAACATCG+AGG | 0.752266 | 3:-75263287 | MsG0380015805.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATATTTATATAATCCAAA+AGG | + | Chr3:75265128-75265147 | None:intergenic | 15.0% |
| !!! | AGGAATTTTGATAATTATTT+TGG | - | Chr3:75264486-75264505 | MsG0380015805.01.T01:CDS | 15.0% |
| !! | AACATGATAAACAAAATGAA+AGG | + | Chr3:75263497-75263516 | None:intergenic | 20.0% |
| !! | AAGCTAAGAAAAACAAAATT+AGG | - | Chr3:75263751-75263770 | MsG0380015805.01.T01:CDS | 20.0% |
| !! | ACATGCATTTATCAAATTAA+TGG | - | Chr3:75263531-75263550 | MsG0380015805.01.T01:three_prime_UTR | 20.0% |
| !! | AGCTAAGAAAAACAAAATTA+GGG | - | Chr3:75263752-75263771 | MsG0380015805.01.T01:CDS | 20.0% |
| !! | ATATACATAAAGTCTTTGTA+TGG | - | Chr3:75264947-75264966 | MsG0380015805.01.T01:intron | 20.0% |
| !! | GATCATATGAATATGAATAT+GGG | - | Chr3:75264516-75264535 | MsG0380015805.01.T01:CDS | 20.0% |
| !! | TAAACAAAATGAAAGGAAAA+TGG | + | Chr3:75263490-75263509 | None:intergenic | 20.0% |
| !! | TATACATAAAGTCTTTGTAT+GGG | - | Chr3:75264948-75264967 | MsG0380015805.01.T01:intron | 20.0% |
| !! | TGATCATATGAATATGAATA+TGG | - | Chr3:75264515-75264534 | MsG0380015805.01.T01:CDS | 20.0% |
| !!! | TAAGTGATCATTTGATTTTT+TGG | + | Chr3:75264220-75264239 | None:intergenic | 20.0% |
| !!! | TCTTTTATACAAAATTGTCA+GGG | - | Chr3:75263904-75263923 | MsG0380015805.01.T01:CDS | 20.0% |
| !!! | TTCTTTTATACAAAATTGTC+AGG | - | Chr3:75263903-75263922 | MsG0380015805.01.T01:CDS | 20.0% |
| ! | AAATTAATGGTGTAGTAGTT+TGG | - | Chr3:75263544-75263563 | MsG0380015805.01.T01:three_prime_UTR | 25.0% |
| ! | ATATGATGAATGGACAAAAT+GGG | - | Chr3:75264556-75264575 | MsG0380015805.01.T01:CDS | 25.0% |
| ! | ATTCAAGTGACAATAGTTTA+GGG | + | Chr3:75264737-75264756 | None:intergenic | 25.0% |
| ! | CGTTTCTTTCTATAAATCAA+GGG | - | Chr3:75265012-75265031 | MsG0380015805.01.T01:intron | 25.0% |
| ! | GTTTCTTTCTATAAATCAAG+GGG | - | Chr3:75265013-75265032 | MsG0380015805.01.T01:intron | 25.0% |
| ! | TATGAAGAAAGTGATTGATT+AGG | + | Chr3:75264912-75264931 | None:intergenic | 25.0% |
| !! | GAAAAGAGAATTTTATGCTT+AGG | - | Chr3:75263566-75263585 | MsG0380015805.01.T01:three_prime_UTR | 25.0% |
| !!! | AATGTGTTAATTTGTCTTGT+TGG | + | Chr3:75263843-75263862 | None:intergenic | 25.0% |
| !!! | ATTTTTTGTCTCTATGTTTG+TGG | - | Chr3:75265287-75265306 | MsG0380015805.01.T01:five_prime_UTR | 25.0% |
| !!! | TGGAATTGGATTATTTTACA+TGG | + | Chr3:75263823-75263842 | None:intergenic | 25.0% |
| !!! | TTAATTTGTCTTGTTGGAAT+TGG | + | Chr3:75263837-75263856 | None:intergenic | 25.0% |
| !!! | TTCACTTTTAATCATGAGAT+CGG | + | Chr3:75263706-75263725 | None:intergenic | 25.0% |
| !!! | TTTTTTGTCTCTATGTTTGT+GGG | - | Chr3:75265288-75265307 | MsG0380015805.01.T01:five_prime_UTR | 25.0% |
| AAAATGGTATACATTGTGCA+TGG | + | Chr3:75263474-75263493 | None:intergenic | 30.0% | |
| AAAGAAAGCTGAAGATCTTT+AGG | + | Chr3:75264297-75264316 | None:intergenic | 30.0% | |
| AAAGTGATTGATTAGGTCAT+TGG | + | Chr3:75264905-75264924 | None:intergenic | 30.0% | |
| AAGAAAGCTGAAGATCTTTA+GGG | + | Chr3:75264296-75264315 | None:intergenic | 30.0% | |
| AATGCATGATGAAAATTCTG+AGG | + | Chr3:75264585-75264604 | None:intergenic | 30.0% | |
| ACTTGTTCTCCATGAAATTA+GGG | + | Chr3:75264380-75264399 | None:intergenic | 30.0% | |
| AGAAGAAAATGAAAGAGGAT+AGG | + | Chr3:75263271-75263290 | None:intergenic | 30.0% | |
| ATGAATATGAATATGGGTGT+TGG | - | Chr3:75264522-75264541 | MsG0380015805.01.T01:CDS | 30.0% | |
| ATTAGGAAACCCTAATTTCA+TGG | - | Chr3:75264368-75264387 | MsG0380015805.01.T01:CDS | 30.0% | |
| CATGATCATTTGAATTGCTA+TGG | - | Chr3:75263641-75263660 | MsG0380015805.01.T01:CDS | 30.0% | |
| CATTCAAGTGACAATAGTTT+AGG | + | Chr3:75264738-75264757 | None:intergenic | 30.0% | |
| GATATGATGAATGGACAAAA+TGG | - | Chr3:75264555-75264574 | MsG0380015805.01.T01:CDS | 30.0% | |
| GATCTCATGATTAAAAGTGA+AGG | - | Chr3:75263705-75263724 | MsG0380015805.01.T01:CDS | 30.0% | |
| GCGTTTCTTTCTATAAATCA+AGG | - | Chr3:75265011-75265030 | MsG0380015805.01.T01:intron | 30.0% | |
| GTTGTTGTAATAGCAGAATT+TGG | + | Chr3:75264079-75264098 | None:intergenic | 30.0% | |
| TACTGAATTAACCAAGAGAT+GGG | - | Chr3:75265050-75265069 | MsG0380015805.01.T01:CDS | 30.0% | |
| TACTTGTTCTCCATGAAATT+AGG | + | Chr3:75264381-75264400 | None:intergenic | 30.0% | |
| TAGCAATGGTGCTTATTTAA+TGG | - | Chr3:75264635-75264654 | MsG0380015805.01.T01:intron | 30.0% | |
| TAGCTCCAAATAAGTTACTT+AGG | + | Chr3:75264341-75264360 | None:intergenic | 30.0% | |
| TCTCACCTAAGTAACTTATT+TGG | - | Chr3:75264333-75264352 | MsG0380015805.01.T01:CDS | 30.0% | |
| TGAATATGAATATGGGTGTT+GGG | - | Chr3:75264523-75264542 | MsG0380015805.01.T01:CDS | 30.0% | |
| ! | AATTTTCATCATGCATTTGG+TGG | - | Chr3:75264588-75264607 | MsG0380015805.01.T01:intron | 30.0% |
| ! | AGTAACTTATTTGGAGCTAA+TGG | - | Chr3:75264342-75264361 | MsG0380015805.01.T01:CDS | 30.0% |
| ! | AGTAAGTTAGAAGGCATAAT+TGG | - | Chr3:75264453-75264472 | MsG0380015805.01.T01:CDS | 30.0% |
| ! | ATCCTCTTTCATTTTCTTCT+CGG | - | Chr3:75263271-75263290 | MsG0380015805.01.T01:three_prime_UTR | 30.0% |
| ! | ATGATGGAAAGTAAGTTAGA+AGG | - | Chr3:75264444-75264463 | MsG0380015805.01.T01:CDS | 30.0% |
| ! | CAGAATTTTCATCATGCATT+TGG | - | Chr3:75264585-75264604 | MsG0380015805.01.T01:intron | 30.0% |
| ! | CTAAACTATTGTCACTTGAA+TGG | - | Chr3:75264736-75264755 | MsG0380015805.01.T01:intron | 30.0% |
| ! | GTAAGTTAGAAGGCATAATT+GGG | - | Chr3:75264454-75264473 | MsG0380015805.01.T01:CDS | 30.0% |
| ! | TTTGGTGGAATGTCATTTAA+TGG | - | Chr3:75264603-75264622 | MsG0380015805.01.T01:intron | 30.0% |
| ! | TTTTTGTCTCTATGTTTGTG+GGG | - | Chr3:75265289-75265308 | MsG0380015805.01.T01:five_prime_UTR | 30.0% |
| AAAGGTCAGTCATTTGGATA+TGG | - | Chr3:75264789-75264808 | MsG0380015805.01.T01:intron | 35.0% | |
| AATGGAGGAAACAATAGCAA+TGG | - | Chr3:75264621-75264640 | MsG0380015805.01.T01:intron | 35.0% | |
| ACAACAAACCCTTTGATCAA+CGG | - | Chr3:75264849-75264868 | MsG0380015805.01.T01:intron | 35.0% | |
| ACATAAAGTCTTTGTATGGG+AGG | - | Chr3:75264951-75264970 | MsG0380015805.01.T01:intron | 35.0% | |
| AGTCATTTGGATATGGATCA+TGG | - | Chr3:75264796-75264815 | MsG0380015805.01.T01:intron | 35.0% | |
| AGTGGTATGATGAATGGTTA+TGG | - | Chr3:75264819-75264838 | MsG0380015805.01.T01:intron | 35.0% | |
| ATCCGAGAAGAAAATGAAAG+AGG | + | Chr3:75263276-75263295 | None:intergenic | 35.0% | |
| ATGTAACATCGAGGAAGATA+TGG | - | Chr3:75265202-75265221 | MsG0380015805.01.T01:five_prime_UTR | 35.0% | |
| ATTGGAGGAGATATGATGAA+TGG | - | Chr3:75264546-75264565 | MsG0380015805.01.T01:CDS | 35.0% | |
| CATAAAGTCTTTGTATGGGA+GGG | - | Chr3:75264952-75264971 | MsG0380015805.01.T01:intron | 35.0% | |
| CTACTGAATTAACCAAGAGA+TGG | - | Chr3:75265049-75265068 | MsG0380015805.01.T01:CDS | 35.0% | |
| CTTTCCATCATGAAGTCAAT+AGG | + | Chr3:75264435-75264454 | None:intergenic | 35.0% | |
| GAGAACAAGTATAGCAATGT+TGG | - | Chr3:75264390-75264409 | MsG0380015805.01.T01:CDS | 35.0% | |
| GTTATTGTCATTGCATTGCA+AGG | + | Chr3:75263303-75263322 | None:intergenic | 35.0% | |
| TATGCTGTAATGTAACATCG+AGG | - | Chr3:75265193-75265212 | MsG0380015805.01.T01:five_prime_UTR | 35.0% | |
| TCCATATGATGCTAATGATG+AGG | - | Chr3:75264680-75264699 | MsG0380015805.01.T01:intron | 35.0% | |
| TCCTCATCATTAGCATCATA+TGG | + | Chr3:75264684-75264703 | None:intergenic | 35.0% | |
| TGTTAAGTGAGAAGAGATAG+AGG | + | Chr3:75263236-75263255 | None:intergenic | 35.0% | |
| ! | AATCACACCTTGGACATTTT+AGG | + | Chr3:75264047-75264066 | None:intergenic | 35.0% |
| ! | AGTGACAATAGTTTAGGGTT+TGG | + | Chr3:75264732-75264751 | None:intergenic | 35.0% |
| ! | ATCACACCTTGGACATTTTA+GGG | + | Chr3:75264046-75264065 | None:intergenic | 35.0% |
| !!! | ATCTTTAGGGTTTTGATGGT+AGG | + | Chr3:75264283-75264302 | None:intergenic | 35.0% |
| !!! | GAAGATCTTTAGGGTTTTGA+TGG | + | Chr3:75264287-75264306 | None:intergenic | 35.0% |
| AATTCACGATGAGTCAGGAA+TGG | - | Chr3:75263930-75263949 | MsG0380015805.01.T01:CDS | 40.0% | |
| ACCTATCCCTAAAATGTCCA+AGG | - | Chr3:75264037-75264056 | MsG0380015805.01.T01:CDS | 40.0% | |
| ACTTCTGCAAGACTTGTAGA+AGG | - | Chr3:75264121-75264140 | MsG0380015805.01.T01:CDS | 40.0% | |
| ATCATGAAGTCAATAGGCCT+AGG | + | Chr3:75264429-75264448 | None:intergenic | 40.0% | |
| ATCCAAAAGGAAACACACCA+AGG | + | Chr3:75265115-75265134 | None:intergenic | 40.0% | |
| CATGTGTTTGTGTTGTGTTG+TGG | + | Chr3:75263189-75263208 | None:intergenic | 40.0% | |
| GATTCATCTTCACCAATGTC+TGG | - | Chr3:75263952-75263971 | MsG0380015805.01.T01:CDS | 40.0% | |
| GCATAATTGGGAGTAGTTCT+AGG | - | Chr3:75264466-75264485 | MsG0380015805.01.T01:CDS | 40.0% | |
| GTGACATGCTAACATGTTCA+AGG | - | Chr3:75263974-75263993 | MsG0380015805.01.T01:CDS | 40.0% | |
| TCATGAAGTCAATAGGCCTA+GGG | + | Chr3:75264428-75264447 | None:intergenic | 40.0% | |
| TCATGGAGTGGTATGATGAA+TGG | - | Chr3:75264813-75264832 | MsG0380015805.01.T01:intron | 40.0% | |
| TGGAATCATCTGCAGATCAT+TGG | - | Chr3:75263433-75263452 | MsG0380015805.01.T01:three_prime_UTR | 40.0% | |
| TTCTCTTCACGTCTGCAATA+TGG | - | Chr3:75263413-75263432 | MsG0380015805.01.T01:three_prime_UTR | 40.0% | |
| TTGTGATCAAGCAGTGTAGT+TGG | + | Chr3:75263363-75263382 | None:intergenic | 40.0% | |
| TTTGGATATGGATCATGGAG+TGG | - | Chr3:75264801-75264820 | MsG0380015805.01.T01:intron | 40.0% | |
| ! | GCAAGACTTGTAGAAGGTAT+TGG | - | Chr3:75264127-75264146 | MsG0380015805.01.T01:CDS | 40.0% |
| ! | GGTGGAATGTCATTTAATGG+AGG | - | Chr3:75264606-75264625 | MsG0380015805.01.T01:intron | 40.0% |
| ! | TTTGGAGCTAATGGAGCATT+AGG | - | Chr3:75264351-75264370 | MsG0380015805.01.T01:CDS | 40.0% |
| !! | ACCTTGGACATTTTAGGGAT+AGG | + | Chr3:75264041-75264060 | None:intergenic | 40.0% |
| !! | ATGAATATGGGTGTTGGGAT+TGG | - | Chr3:75264528-75264547 | MsG0380015805.01.T01:CDS | 40.0% |
| !! | CATTTTAGGGATAGGTCATG+TGG | + | Chr3:75264033-75264052 | None:intergenic | 40.0% |
| !! | GTTGATCAAAGGGTTTGTTG+TGG | + | Chr3:75264850-75264869 | None:intergenic | 40.0% |
| !! | TAGGCCTATTGACTTCATGA+TGG | - | Chr3:75264428-75264447 | MsG0380015805.01.T01:CDS | 40.0% |
| !! | TCTGAGCTTGGCTTTTGAAT+GGG | - | Chr3:75263384-75263403 | MsG0380015805.01.T01:three_prime_UTR | 40.0% |
| !! | TGTAGAAGGTATTGGACCAA+AGG | - | Chr3:75264135-75264154 | MsG0380015805.01.T01:CDS | 40.0% |
| !! | TTAGGGTTTTGATGGTAGGA+AGG | + | Chr3:75264279-75264298 | None:intergenic | 40.0% |
| ACACACCAAGGCAGTAGATT+TGG | + | Chr3:75265103-75265122 | None:intergenic | 45.0% | |
| ACACTTAGGAACATCCCTGT+TGG | - | Chr3:75264162-75264181 | MsG0380015805.01.T01:CDS | 45.0% | |
| AGAGCTTAGCCGTTGATCAA+AGG | + | Chr3:75264861-75264880 | None:intergenic | 45.0% | |
| AGAGTCCAAATCTACTGCCT+TGG | - | Chr3:75265095-75265114 | MsG0380015805.01.T01:exon | 45.0% | |
| AGGTGAGAGAATTGCACATC+AGG | + | Chr3:75264321-75264340 | None:intergenic | 45.0% | |
| CATCATCCATGATAGAGAGG+AGG | - | Chr3:75263998-75264017 | MsG0380015805.01.T01:CDS | 45.0% | |
| CTCCTCTCTATCATGGATGA+TGG | + | Chr3:75264000-75264019 | None:intergenic | 45.0% | |
| CTTGAATGGCAGCAAGATCA+AGG | - | Chr3:75264750-75264769 | MsG0380015805.01.T01:intron | 45.0% | |
| CTTGATCACAACTCTGAGCT+TGG | - | Chr3:75263372-75263391 | MsG0380015805.01.T01:three_prime_UTR | 45.0% | |
| GAGCTTAGCCGTTGATCAAA+GGG | + | Chr3:75264860-75264879 | None:intergenic | 45.0% | |
| GCTGGAAAAGGTCAGTCATT+TGG | - | Chr3:75264783-75264802 | MsG0380015805.01.T01:intron | 45.0% | |
| GGTGAGAGAATTGCACATCA+GGG | + | Chr3:75264320-75264339 | None:intergenic | 45.0% | |
| GTTAGCATGTCACCAGACAT+TGG | + | Chr3:75263967-75263986 | None:intergenic | 45.0% | |
| GTTCCTAAGTGTTCCTCCTT+TGG | + | Chr3:75264154-75264173 | None:intergenic | 45.0% | |
| TCTTAGCCTCCTCTCTATCA+TGG | + | Chr3:75264007-75264026 | None:intergenic | 45.0% | |
| TTGGCATGCTTGAAAACCCT+AGG | - | Chr3:75264409-75264428 | MsG0380015805.01.T01:CDS | 45.0% | |
| TTTAGGGATAGGTCATGTGG+TGG | + | Chr3:75264030-75264049 | None:intergenic | 45.0% | |
| ! | AGGAAGGTACATGATGTGGT+TGG | + | Chr3:75264263-75264282 | None:intergenic | 45.0% |
| ! | ATCTGCAGATCATTGGTTGC+AGG | - | Chr3:75263440-75263459 | MsG0380015805.01.T01:three_prime_UTR | 45.0% |
| ! | GTGTGAGTTGAATCACACCT+TGG | + | Chr3:75264057-75264076 | None:intergenic | 45.0% |
| ! | TGGTAGGAAGGTACATGATG+TGG | + | Chr3:75264267-75264286 | None:intergenic | 45.0% |
| !! | AATATGGGTGTTGGGATTGG+AGG | - | Chr3:75264531-75264550 | MsG0380015805.01.T01:CDS | 45.0% |
| !! | AGAAGGTATTGGACCAAAGG+AGG | - | Chr3:75264138-75264157 | MsG0380015805.01.T01:CDS | 45.0% |
| !! | CAAGTCTTGCAGAAGTACCT+TGG | + | Chr3:75264117-75264136 | None:intergenic | 45.0% |
| !! | CTCTGAGCTTGGCTTTTGAA+TGG | - | Chr3:75263383-75263402 | MsG0380015805.01.T01:three_prime_UTR | 45.0% |
| !! | TGCCTTGGTGTGTTTCCTTT+TGG | - | Chr3:75265110-75265129 | MsG0380015805.01.T01:five_prime_UTR | 45.0% |
| !! | AAAAAAAAAAAAAAAATACA+TGG | + | Chr3:75264986-75265005 | None:intergenic | 5.0% |
| ACTACAGTCTCTCTCAGCCA+AGG | - | Chr3:75264097-75264116 | MsG0380015805.01.T01:CDS | 50.0% | |
| CGACACGTCATGGAAGCTTT+AGG | - | Chr3:75265163-75265182 | MsG0380015805.01.T01:five_prime_UTR | 50.0% | |
| CTTAGGAACATCCCTGTTGG+TGG | - | Chr3:75264165-75264184 | MsG0380015805.01.T01:CDS | 50.0% | |
| GATCAAGGTTGCTCTGATGC+TGG | - | Chr3:75264765-75264784 | MsG0380015805.01.T01:intron | 50.0% | |
| GGACCAAAGGAGGAACACTT+AGG | - | Chr3:75264148-75264167 | MsG0380015805.01.T01:CDS | 50.0% | |
| GGCACAATTCACGATGAGTC+AGG | - | Chr3:75263925-75263944 | MsG0380015805.01.T01:CDS | 50.0% | |
| GGCCATCATCCATGATAGAG+AGG | - | Chr3:75263995-75264014 | MsG0380015805.01.T01:CDS | 50.0% | |
| GGTTGCTCTGATGCTGGAAA+AGG | - | Chr3:75264771-75264790 | MsG0380015805.01.T01:intron | 50.0% | |
| TCTTTGTGTGCGACACGTCA+TGG | - | Chr3:75265153-75265172 | MsG0380015805.01.T01:five_prime_UTR | 50.0% | |
| TTCACACTCGACCCATCTCT+TGG | + | Chr3:75265064-75265083 | None:intergenic | 50.0% | |
| TTCTACAGCCTCCACCAACA+GGG | + | Chr3:75264179-75264198 | None:intergenic | 50.0% | |
| TTTCTACAGCCTCCACCAAC+AGG | + | Chr3:75264180-75264199 | None:intergenic | 50.0% | |
| ! | AGGAACATCCCTGTTGGTGG+AGG | - | Chr3:75264168-75264187 | MsG0380015805.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 75263184 | 75265318 | 75263184 | ID=MsG0380015805.01;Name=MsG0380015805.01 |
| Chr3 | mRNA | 75263184 | 75265318 | 75263184 | ID=MsG0380015805.01.T01;Parent=MsG0380015805.01;Name=MsG0380015805.01.T01;_AED=0.19;_eAED=0.19;_QI=218|1|1|1|1|1|2|443|336 |
| Chr3 | exon | 75263184 | 75264577 | 75263184 | ID=MsG0380015805.01.T01:exon:24650;Parent=MsG0380015805.01.T01 |
| Chr3 | exon | 75265041 | 75265318 | 75265041 | ID=MsG0380015805.01.T01:exon:24649;Parent=MsG0380015805.01.T01 |
| Chr3 | five_prime_UTR | 75265101 | 75265318 | 75265101 | ID=MsG0380015805.01.T01:five_prime_utr;Parent=MsG0380015805.01.T01 |
| Chr3 | CDS | 75265041 | 75265100 | 75265041 | ID=MsG0380015805.01.T01:cds;Parent=MsG0380015805.01.T01 |
| Chr3 | CDS | 75263627 | 75264577 | 75263627 | ID=MsG0380015805.01.T01:cds;Parent=MsG0380015805.01.T01 |
| Chr3 | three_prime_UTR | 75263184 | 75263626 | 75263184 | ID=MsG0380015805.01.T01:three_prime_utr;Parent=MsG0380015805.01.T01 |
| Gene Sequence |
| Protein sequence |
