Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047059.01.T01 | AES91885.1 | 91.757 | 461 | 13 | 7 | 1 | 452 | 1 | 445 | 0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047059.01.T01 | G7JLJ0 | 91.757 | 461 | 13 | 7 | 1 | 452 | 1 | 445 | 0.0 | 624 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080049140.01 | MsG0880047059.01 | 0.819229 | 1.295787e-52 | 9.913497e-50 |
| MsG0880045430.01 | MsG0880047059.01 | 0.810169 | 1.317734e-50 | 7.887044e-48 |
| MsG0880045890.01 | MsG0880047059.01 | 0.820063 | 8.361312e-53 | 6.548027e-50 |
| MsG0180003427.01 | MsG0880047059.01 | 0.803090 | 4.115341e-49 | 2.049516e-46 |
| MsG0180004661.01 | MsG0880047059.01 | 0.843172 | 1.650303e-58 | 2.560173e-55 |
| MsG0180005002.01 | MsG0880047059.01 | 0.801216 | 9.995164e-49 | 4.746764e-46 |
| MsG0180006133.01 | MsG0880047059.01 | 0.810643 | 1.040937e-50 | 6.309030e-48 |
| MsG0280006311.01 | MsG0880047059.01 | 0.803846 | 2.868844e-49 | 1.456919e-46 |
| MsG0780040509.01 | MsG0880047059.01 | 0.816026 | 6.837671e-52 | 4.790854e-49 |
| MsG0780040620.01 | MsG0880047059.01 | 0.815888 | 7.339118e-52 | 5.122509e-49 |
| MsG0780041063.01 | MsG0880047059.01 | 0.822817 | 1.933647e-53 | 1.636027e-50 |
| MsG0780041340.01 | MsG0880047059.01 | 0.805455 | 1.324014e-49 | 7.007902e-47 |
| MsG0780041449.01 | MsG0880047059.01 | 0.829030 | 6.465475e-55 | 6.537769e-52 |
| MsG0780041660.01 | MsG0880047059.01 | 0.802806 | 4.709984e-49 | 2.329064e-46 |
| MsG0880042906.01 | MsG0880047059.01 | 0.800850 | 1.187467e-48 | 5.587492e-46 |
| MsG0880043637.01 | MsG0880047059.01 | 0.826993 | 1.999062e-54 | 1.904981e-51 |
| MsG0480019922.01 | MsG0880047059.01 | 0.800560 | 1.360835e-48 | 6.356059e-46 |
| MsG0480020463.01 | MsG0880047059.01 | 0.832430 | 9.498662e-56 | 1.061397e-52 |
| MsG0480020495.01 | MsG0880047059.01 | 0.822633 | 2.134455e-53 | 1.796640e-50 |
| MsG0480020847.01 | MsG0880047059.01 | 0.813788 | 2.143610e-51 | 1.413204e-48 |
| MsG0480022784.01 | MsG0880047059.01 | 0.805533 | 1.274872e-49 | 6.761034e-47 |
| MsG0480022982.01 | MsG0880047059.01 | 0.801065 | 1.073211e-48 | 5.077556e-46 |
| MsG0480022998.01 | MsG0880047059.01 | 0.841412 | 4.826105e-58 | 7.085972e-55 |
| MsG0480023262.01 | MsG0880047059.01 | 0.806255 | 8.989393e-50 | 4.856617e-47 |
| MsG0480023296.01 | MsG0880047059.01 | 0.823478 | 1.355371e-53 | 1.168341e-50 |
| MsG0480023653.01 | MsG0880047059.01 | 0.809165 | 2.165116e-50 | 1.262003e-47 |
| MsG0580024380.01 | MsG0880047059.01 | 0.835575 | 1.549020e-56 | 1.901937e-53 |
| MsG0580024758.01 | MsG0880047059.01 | 0.800903 | 1.158459e-48 | 5.458416e-46 |
| MsG0580024835.01 | MsG0880047059.01 | 0.800019 | 1.753598e-48 | 8.078832e-46 |
| MsG0580025124.01 | MsG0880047059.01 | 0.807711 | 4.423203e-50 | 2.481191e-47 |
| MsG0580025506.01 | MsG0880047059.01 | 0.807264 | 5.503081e-50 | 3.051356e-47 |
| MsG0380015189.01 | MsG0880047059.01 | 0.808096 | 3.663296e-50 | 2.075853e-47 |
| MsG0380015350.01 | MsG0880047059.01 | 0.800703 | 1.272588e-48 | 5.965216e-46 |
| MsG0380016703.01 | MsG0880047059.01 | 0.808289 | 3.332898e-50 | 1.898257e-47 |
| MsG0380017164.01 | MsG0880047059.01 | 0.841535 | 4.478890e-58 | 6.601192e-55 |
| MsG0380017282.01 | MsG0880047059.01 | 0.840345 | 9.197448e-58 | 1.306253e-54 |
| MsG0480018106.01 | MsG0880047059.01 | 0.802042 | 6.769678e-49 | 3.282760e-46 |
| MsG0480018397.01 | MsG0880047059.01 | 0.834133 | 3.575206e-56 | 4.203785e-53 |
| MsG0580028756.01 | MsG0880047059.01 | 0.833106 | 6.450596e-56 | 7.355948e-53 |
| MsG0280006540.01 | MsG0880047059.01 | 0.801888 | 7.279915e-49 | 3.516625e-46 |
| MsG0280006563.01 | MsG0880047059.01 | 0.803428 | 3.501855e-49 | 1.759332e-46 |
| MsG0780035954.01 | MsG0880047059.01 | 0.863600 | 2.216813e-64 | 6.758499e-61 |
| MsG0780038373.01 | MsG0880047059.01 | 0.800548 | 1.368437e-48 | 6.389610e-46 |
| MsG0780039578.01 | MsG0880047059.01 | 0.833882 | 4.130925e-56 | 4.821359e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047059.01.T01 | MTR_4g120050 | 91.757 | 461 | 13 | 7 | 1 | 452 | 1 | 445 | 0.0 | 624 |
| MsG0880047059.01.T01 | MTR_4g120050 | 91.757 | 461 | 13 | 7 | 1 | 452 | 7 | 451 | 0.0 | 623 |
| MsG0880047059.01.T01 | MTR_2g436340 | 47.182 | 479 | 135 | 20 | 1 | 452 | 1 | 388 | 6.41e-86 | 268 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047059.01.T01 | AT3G06868 | 40.397 | 453 | 173 | 13 | 10 | 451 | 2 | 368 | 3.07e-69 | 224 |
| MsG0880047059.01.T01 | AT5G49100 | 77.273 | 44 | 10 | 0 | 15 | 58 | 6 | 49 | 5.50e-18 | 85.9 |
Find 92 sgRNAs with CRISPR-Local
Find 112 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGTTTCAGCATCTGTTTC+TGG | 0.093012 | 8:-81442957 | MsG0880047059.01.T01:CDS |
| ATTCATCAACTTCATCTTAT+TGG | 0.130948 | 8:-81442311 | MsG0880047059.01.T01:CDS |
| TACTACTTTGTTTATCTTCT+GGG | 0.195517 | 8:-81441921 | MsG0880047059.01.T01:three_prime_UTR |
| CTTGCTTCTTGTTAATATTC+AGG | 0.197367 | 8:-81441818 | MsG0880047059.01.T01:three_prime_UTR |
| CTACTACTTTGTTTATCTTC+TGG | 0.199407 | 8:-81441922 | MsG0880047059.01.T01:three_prime_UTR |
| CAAGGTTGGTAAAGAATAAA+AGG | 0.237523 | 8:-81442021 | MsG0880047059.01.T01:three_prime_UTR |
| TTCATCAACTTCATCTTATT+GGG | 0.273852 | 8:-81442310 | MsG0880047059.01.T01:CDS |
| TTCACATGCATACACATGTT+TGG | 0.302026 | 8:-81441517 | MsG0880047059.01.T01:three_prime_UTR |
| ATAAAAGGAGATTTAACATT+TGG | 0.317689 | 8:-81442006 | MsG0880047059.01.T01:three_prime_UTR |
| TTGTTGTTGCTGCTGCTATT+AGG | 0.320807 | 8:+81442636 | None:intergenic |
| GAAAGAATTTCAACTGGGTT+TGG | 0.321464 | 8:-81442528 | MsG0880047059.01.T01:CDS |
| GATGGCATAGCAGATAAATT+TGG | 0.321817 | 8:+81442078 | None:intergenic |
| ATAGAGTTACTACCTCTTCT+TGG | 0.326180 | 8:+81442882 | None:intergenic |
| CTTAAGGAAAAGTGTTGTTC+AGG | 0.342745 | 8:-81442714 | MsG0880047059.01.T01:CDS |
| TACCTACATAGAATCACTTT+TGG | 0.368840 | 8:-81441472 | MsG0880047059.01.T01:three_prime_UTR |
| TTCTTTGAAAGAATTTCAAC+TGG | 0.376508 | 8:-81442534 | MsG0880047059.01.T01:CDS |
| TGTTGCTGATACAGTGTTGA+TGG | 0.397885 | 8:+81443124 | None:intergenic |
| TCACATGCATACACATGTTT+GGG | 0.404113 | 8:-81441516 | MsG0880047059.01.T01:three_prime_UTR |
| ACATAGTGTGCATTACAATA+AGG | 0.412152 | 8:+81441592 | None:intergenic |
| AGTAGCATTATTAAAGCTCT+TGG | 0.412538 | 8:+81442749 | None:intergenic |
| GAAGATGAAACGGCATGAAT+AGG | 0.417575 | 8:+81443227 | None:intergenic |
| TGGTGGAAAGAGTTGGGGTT+GGG | 0.418864 | 8:-81442214 | MsG0880047059.01.T01:CDS |
| GCTCTTGGAATTCAAACTCT+TGG | 0.420196 | 8:+81442764 | None:intergenic |
| GAGAGAGTACTTAGAAGATG+TGG | 0.429448 | 8:-81442378 | MsG0880047059.01.T01:CDS |
| TGTGGTAGCAGAAGCTTCTC+TGG | 0.436507 | 8:-81442561 | MsG0880047059.01.T01:CDS |
| AAACCGTGGTGGAAAGAGTT+GGG | 0.438847 | 8:-81442220 | MsG0880047059.01.T01:CDS |
| CAGAACTCAGAAGTCCTCTA+TGG | 0.439138 | 8:-81441735 | MsG0880047059.01.T01:three_prime_UTR |
| TTTCTCTTAGCTAAGAGAAA+AGG | 0.439645 | 8:+81442993 | None:intergenic |
| AGAAGTCCTCTATGGCATAA+TGG | 0.441851 | 8:-81441727 | MsG0880047059.01.T01:three_prime_UTR |
| TCATGCAATGGTGGTGGTGG+TGG | 0.442897 | 8:+81442403 | None:intergenic |
| CCATCTTTGCTTTCTGCTAG+AGG | 0.444298 | 8:-81442060 | MsG0880047059.01.T01:CDS |
| TGTCTTAATTACTATGACAT+TGG | 0.445835 | 8:-81441637 | MsG0880047059.01.T01:three_prime_UTR |
| TACTGCTTCAGCAAAGCTTA+AGG | 0.447924 | 8:-81442730 | MsG0880047059.01.T01:CDS |
| AAGAAGAGGTAGTAACTCTA+TGG | 0.451639 | 8:-81442880 | MsG0880047059.01.T01:CDS |
| CCACCAGGGTTGTTTCTGTA+AGG | 0.453511 | 8:+81443311 | None:intergenic |
| AGATGAAGAAGGTGCAATAT+CGG | 0.460435 | 8:+81443181 | None:intergenic |
| GTTTCAAGATCTAGATCTGT+TGG | 0.462444 | 8:-81442585 | MsG0880047059.01.T01:CDS |
| AATGCATTGCATGCCATCAA+TGG | 0.463242 | 8:+81443340 | None:intergenic |
| CTTTCATGCAATGGTGGTGG+TGG | 0.470222 | 8:+81442400 | None:intergenic |
| TGTTGTTCAGGTTCTTCTCT+AGG | 0.476919 | 8:-81442702 | MsG0880047059.01.T01:CDS |
| TTGCTACTAAAAGCTCTCAT+AGG | 0.486290 | 8:+81442180 | None:intergenic |
| GGTGAAGATGATTCCATTGA+TGG | 0.500906 | 8:-81443353 | MsG0880047059.01.T01:CDS |
| CTCTCTCTTTCATGCAATGG+TGG | 0.507725 | 8:+81442394 | None:intergenic |
| TCTGCTGATGATGCTGTGAA+TGG | 0.510492 | 8:-81442276 | MsG0880047059.01.T01:CDS |
| TGAAGAAGAAGAAGATGAAA+CGG | 0.520106 | 8:+81443217 | None:intergenic |
| CCTCTAGCAGAAAGCAAAGA+TGG | 0.523438 | 8:+81442060 | None:intergenic |
| CAACGTGAAGGTAAATCAAA+GGG | 0.524007 | 8:-81442477 | MsG0880047059.01.T01:CDS |
| AGAGTACTTAGAAGATGTGG+AGG | 0.530225 | 8:-81442375 | MsG0880047059.01.T01:CDS |
| TCAACGTGAAGGTAAATCAA+AGG | 0.542593 | 8:-81442478 | MsG0880047059.01.T01:CDS |
| AGGAGGACAATGACGAGTAG+TGG | 0.546244 | 8:+81443151 | None:intergenic |
| ACAATGACGAGTAGTGGAAG+TGG | 0.547008 | 8:+81443157 | None:intergenic |
| GTACTCTCTCTTTCATGCAA+TGG | 0.549611 | 8:+81442391 | None:intergenic |
| TCTCTTTCATGCAATGGTGG+TGG | 0.551870 | 8:+81442397 | None:intergenic |
| AAAACCGTGGTGGAAAGAGT+TGG | 0.552394 | 8:-81442221 | MsG0880047059.01.T01:CDS |
| GTGGAAGTGGAAGATGAAGA+AGG | 0.557173 | 8:+81443170 | None:intergenic |
| ATGGAAGCTATGAAAGGAGG+TGG | 0.557344 | 8:-81443392 | MsG0880047059.01.T01:CDS |
| GGTGGTGGTGGTCTTGAGCA+CGG | 0.563918 | 8:+81442418 | None:intergenic |
| TGGGTAGTGTAGAGACAATA+CGG | 0.564697 | 8:-81441497 | MsG0880047059.01.T01:three_prime_UTR |
| GATTGATTACAGAACAAGGT+TGG | 0.566311 | 8:-81442035 | MsG0880047059.01.T01:three_prime_UTR |
| GGAGTAGTTGCTAGTTCTAA+CGG | 0.567503 | 8:-81442456 | MsG0880047059.01.T01:CDS |
| AGATCTAGATCTGTTGGATG+TGG | 0.570100 | 8:-81442579 | MsG0880047059.01.T01:CDS |
| GAAACGGCATGAATAGGAAG+AGG | 0.578837 | 8:+81443233 | None:intergenic |
| GGTGGAAGAGTTAACATTGG+TGG | 0.580786 | 8:-81443374 | MsG0880047059.01.T01:CDS |
| GCAATATCGGATCTGAAAGA+AGG | 0.583095 | 8:+81443194 | None:intergenic |
| AAAGTACCATTATGCCATAG+AGG | 0.583109 | 8:+81441721 | None:intergenic |
| CTCCACATGGAAGCTATGAA+AGG | 0.591526 | 8:-81443398 | None:intergenic |
| GATACAGTGTTGATGGAAGA+AGG | 0.600181 | 8:+81443131 | None:intergenic |
| GATGATGCTGTGAATGGAGG+AGG | 0.601572 | 8:-81442270 | MsG0880047059.01.T01:CDS |
| GTGAATGGAGGAGGAAAACA+AGG | 0.606362 | 8:-81442261 | MsG0880047059.01.T01:CDS |
| TCAACTGCAACACCAAGAAG+AGG | 0.609625 | 8:-81442894 | MsG0880047059.01.T01:CDS |
| GCTGATGATGCTGTGAATGG+AGG | 0.611420 | 8:-81442273 | MsG0880047059.01.T01:CDS |
| GTGGTGGAAAGAGTTGGGGT+TGG | 0.618705 | 8:-81442215 | MsG0880047059.01.T01:CDS |
| AGAGTTGAATCTCAACGTGA+AGG | 0.620108 | 8:-81442489 | MsG0880047059.01.T01:CDS |
| AGAAACAGATGCTGAAACAG+AGG | 0.622276 | 8:+81442959 | None:intergenic |
| AGCCAAAAGTGATTCTATGT+AGG | 0.624760 | 8:+81441470 | None:intergenic |
| AACCGTGGTGGAAAGAGTTG+GGG | 0.625855 | 8:-81442219 | MsG0880047059.01.T01:CDS |
| ATGCATTCTCTGTCATCACG+TGG | 0.626467 | 8:-81441662 | MsG0880047059.01.T01:three_prime_UTR |
| GGAGGTGGAAGAGTTAACAT+TGG | 0.629960 | 8:-81443377 | MsG0880047059.01.T01:CDS |
| AACCCCAACTCTTTCCACCA+CGG | 0.631839 | 8:+81442217 | None:intergenic |
| GGATGATTGATTACAGAACA+AGG | 0.637962 | 8:-81442039 | MsG0880047059.01.T01:exon |
| CACATGGAAGCTATGAAAGG+AGG | 0.640939 | 8:-81443395 | MsG0880047059.01.T01:CDS |
| CTTACAGAAACAACCCTGGT+GGG | 0.650568 | 8:-81443310 | MsG0880047059.01.T01:CDS |
| AGATGTGGAGGAATATTCAG+TGG | 0.663518 | 8:-81442363 | MsG0880047059.01.T01:CDS |
| TCTTTGAAAGAATTTCAACT+GGG | 0.667021 | 8:-81442533 | MsG0880047059.01.T01:CDS |
| TTCTAGAATAGTATTCATGG+TGG | 0.674918 | 8:+81443027 | None:intergenic |
| AAACGGCATGAATAGGAAGA+GGG | 0.675809 | 8:+81443234 | None:intergenic |
| CCTTACAGAAACAACCCTGG+TGG | 0.681499 | 8:-81443311 | MsG0880047059.01.T01:CDS |
| GTAACAGTTTCTCAAAACCG+TGG | 0.681671 | 8:-81442234 | MsG0880047059.01.T01:CDS |
| ACAGTTTCTCAAAACCGTGG+TGG | 0.685632 | 8:-81442231 | MsG0880047059.01.T01:CDS |
| TGTAATGCACACTATGTGTG+TGG | 0.703678 | 8:-81441586 | MsG0880047059.01.T01:three_prime_UTR |
| CATCCTTACAGAAACAACCC+TGG | 0.718016 | 8:-81443314 | MsG0880047059.01.T01:CDS |
| ACAGTGTTGATGGAAGAAGG+AGG | 0.760277 | 8:+81443134 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGAAAAATTACATTTCTT+TGG | + | Chr8:81443268-81443287 | None:intergenic | 15.0% |
| !! | ATAAAAGGAGATTTAACATT+TGG | - | Chr8:81442815-81442834 | MsG0880047059.01.T01:CDS | 20.0% |
| !!! | TTTTTCTAGAATAGTATTCA+TGG | + | Chr8:81441800-81441819 | None:intergenic | 20.0% |
| ! | ATTCATCAACTTCATCTTAT+TGG | - | Chr8:81442510-81442529 | MsG0880047059.01.T01:CDS | 25.0% |
| ! | CCTACAAAAAATGAAAATCA+TGG | - | Chr8:81441762-81441781 | MsG0880047059.01.T01:three_prime_UTR | 25.0% |
| ! | TGTCTTAATTACTATGACAT+TGG | - | Chr8:81443184-81443203 | MsG0880047059.01.T01:CDS | 25.0% |
| ! | TTAGTCCAAGAAAAAGAAAT+GGG | - | Chr8:81441985-81442004 | MsG0880047059.01.T01:three_prime_UTR | 25.0% |
| ! | TTCATCAACTTCATCTTATT+GGG | - | Chr8:81442511-81442530 | MsG0880047059.01.T01:CDS | 25.0% |
| ! | TTTAGTCCAAGAAAAAGAAA+TGG | - | Chr8:81441984-81442003 | MsG0880047059.01.T01:three_prime_UTR | 25.0% |
| !! | TACTACTTTGTTTATCTTCT+GGG | - | Chr8:81442900-81442919 | MsG0880047059.01.T01:CDS | 25.0% |
| !! | TCTTTGAAAGAATTTCAACT+GGG | - | Chr8:81442288-81442307 | MsG0880047059.01.T01:CDS | 25.0% |
| !! | TTCTTTGAAAGAATTTCAAC+TGG | - | Chr8:81442287-81442306 | MsG0880047059.01.T01:CDS | 25.0% |
| !! | TTTTGTCTTCAAGAAAAACT+TGG | - | Chr8:81441543-81441562 | MsG0880047059.01.T01:three_prime_UTR | 25.0% |
| !!! | AATGGTACTTTTTTTGAGAT+GGG | - | Chr8:81443112-81443131 | MsG0880047059.01.T01:CDS | 25.0% |
| !!! | CCATGATTTTCATTTTTTGT+AGG | + | Chr8:81441765-81441784 | None:intergenic | 25.0% |
| !!! | TAATGGTACTTTTTTTGAGA+TGG | - | Chr8:81443111-81443130 | MsG0880047059.01.T01:CDS | 25.0% |
| ACATAGTGTGCATTACAATA+AGG | + | Chr8:81443232-81443251 | None:intergenic | 30.0% | |
| AGTAGCATTATTAAAGCTCT+TGG | + | Chr8:81442075-81442094 | None:intergenic | 30.0% | |
| CTTGCTTCTTGTTAATATTC+AGG | - | Chr8:81443003-81443022 | MsG0880047059.01.T01:CDS | 30.0% | |
| TGAAGAAGAAGAAGATGAAA+CGG | + | Chr8:81441607-81441626 | None:intergenic | 30.0% | |
| TTTCTCTTAGCTAAGAGAAA+AGG | + | Chr8:81441850-81441831 | None:intergenic | 30.0% | |
| ! | CAAAACCCATTTCTTTTTCT+TGG | + | Chr8:81441993-81442012 | None:intergenic | 30.0% |
| ! | CTACTACTTTGTTTATCTTC+TGG | - | Chr8:81442899-81442918 | MsG0880047059.01.T01:CDS | 30.0% |
| ! | TACCTACATAGAATCACTTT+TGG | - | Chr8:81443349-81443368 | MsG0880047059.01.T01:CDS | 30.0% |
| !! | CAAGAAAAAGAAATGGGTTT+TGG | - | Chr8:81441991-81442010 | MsG0880047059.01.T01:three_prime_UTR | 30.0% |
| !! | CAAGGTTGGTAAAGAATAAA+AGG | - | Chr8:81442800-81442819 | MsG0880047059.01.T01:CDS | 30.0% |
| !! | TTCTAGAATAGTATTCATGG+TGG | + | Chr8:81441797-81441816 | None:intergenic | 30.0% |
| !!! | ATGGTACTTTTTTTGAGATG+GGG | - | Chr8:81443113-81443132 | MsG0880047059.01.T01:CDS | 30.0% |
| AAGAAGAGGTAGTAACTCTA+TGG | - | Chr8:81441941-81441960 | MsG0880047059.01.T01:three_prime_UTR | 35.0% | |
| AGCCAAAAGTGATTCTATGT+AGG | + | Chr8:81443354-81443373 | None:intergenic | 35.0% | |
| ATAGAGTTACTACCTCTTCT+TGG | + | Chr8:81441942-81441961 | None:intergenic | 35.0% | |
| CAACGTGAAGGTAAATCAAA+GGG | - | Chr8:81442344-81442363 | MsG0880047059.01.T01:CDS | 35.0% | |
| GAAAGAATTTCAACTGGGTT+TGG | - | Chr8:81442293-81442312 | MsG0880047059.01.T01:CDS | 35.0% | |
| GATGGCATAGCAGATAAATT+TGG | + | Chr8:81442746-81442765 | None:intergenic | 35.0% | |
| GATTGATTACAGAACAAGGT+TGG | - | Chr8:81442786-81442805 | MsG0880047059.01.T01:CDS | 35.0% | |
| GGATGATTGATTACAGAACA+AGG | - | Chr8:81442782-81442801 | MsG0880047059.01.T01:CDS | 35.0% | |
| GTTTCAAGATCTAGATCTGT+TGG | - | Chr8:81442236-81442255 | MsG0880047059.01.T01:CDS | 35.0% | |
| TCAACGTGAAGGTAAATCAA+AGG | - | Chr8:81442343-81442362 | MsG0880047059.01.T01:CDS | 35.0% | |
| TCACATGCATACACATGTTT+GGG | - | Chr8:81443305-81443324 | MsG0880047059.01.T01:CDS | 35.0% | |
| TTCACATGCATACACATGTT+TGG | - | Chr8:81443304-81443323 | MsG0880047059.01.T01:CDS | 35.0% | |
| TTGCTACTAAAAGCTCTCAT+AGG | + | Chr8:81442644-81442663 | None:intergenic | 35.0% | |
| ! | AAAGTACCATTATGCCATAG+AGG | + | Chr8:81443103-81443122 | None:intergenic | 35.0% |
| ! | AGATGAAGAAGGTGCAATAT+CGG | + | Chr8:81441643-81441662 | None:intergenic | 35.0% |
| ! | ATGAGAGCTTTTAGTAGCAA+AGG | - | Chr8:81442644-81442663 | MsG0880047059.01.T01:CDS | 35.0% |
| !! | CTTAAGGAAAAGTGTTGTTC+AGG | - | Chr8:81442107-81442126 | MsG0880047059.01.T01:CDS | 35.0% |
| !!! | TGGTACTTTTTTTGAGATGG+GGG | - | Chr8:81443114-81443133 | MsG0880047059.01.T01:CDS | 35.0% |
| AAACGGCATGAATAGGAAGA+GGG | + | Chr8:81441590-81441609 | None:intergenic | 40.0% | |
| AATGCATTGCATGCCATCAA+TGG | + | Chr8:81441484-81441503 | None:intergenic | 40.0% | |
| AGAAACAGATGCTGAAACAG+AGG | + | Chr8:81441865-81441884 | None:intergenic | 40.0% | |
| AGAAGTCCTCTATGGCATAA+TGG | - | Chr8:81443094-81443113 | MsG0880047059.01.T01:CDS | 40.0% | |
| AGAGTTGAATCTCAACGTGA+AGG | - | Chr8:81442332-81442351 | MsG0880047059.01.T01:CDS | 40.0% | |
| AGATCTAGATCTGTTGGATG+TGG | - | Chr8:81442242-81442261 | MsG0880047059.01.T01:CDS | 40.0% | |
| AGATGTGGAGGAATATTCAG+TGG | - | Chr8:81442458-81442477 | MsG0880047059.01.T01:CDS | 40.0% | |
| AGCAACAACAACAACAACAC+AGG | - | Chr8:81442197-81442216 | MsG0880047059.01.T01:CDS | 40.0% | |
| GAAGATGAAACGGCATGAAT+AGG | + | Chr8:81441597-81441616 | None:intergenic | 40.0% | |
| GCAATATCGGATCTGAAAGA+AGG | + | Chr8:81441630-81441649 | None:intergenic | 40.0% | |
| GCTCTTGGAATTCAAACTCT+TGG | + | Chr8:81442060-81442079 | None:intergenic | 40.0% | |
| GGTGAAGATGATTCCATTGA+TGG | - | Chr8:81441468-81441487 | MsG0880047059.01.T01:three_prime_UTR | 40.0% | |
| GTAACAGTTTCTCAAAACCG+TGG | - | Chr8:81442587-81442606 | MsG0880047059.01.T01:CDS | 40.0% | |
| GTACTCTCTCTTTCATGCAA+TGG | + | Chr8:81442433-81442452 | None:intergenic | 40.0% | |
| TACTGCTTCAGCAAAGCTTA+AGG | - | Chr8:81442091-81442110 | MsG0880047059.01.T01:CDS | 40.0% | |
| TCTGTTTCAGCATCTGTTTC+TGG | - | Chr8:81441864-81441883 | MsG0880047059.01.T01:three_prime_UTR | 40.0% | |
| TGGGTAGTGTAGAGACAATA+CGG | - | Chr8:81443324-81443343 | MsG0880047059.01.T01:CDS | 40.0% | |
| TGTAATGCACACTATGTGTG+TGG | - | Chr8:81443235-81443254 | MsG0880047059.01.T01:CDS | 40.0% | |
| ! | AGAGTACTTAGAAGATGTGG+AGG | - | Chr8:81442446-81442465 | MsG0880047059.01.T01:CDS | 40.0% |
| ! | TGTTGCTGATACAGTGTTGA+TGG | + | Chr8:81441700-81441719 | None:intergenic | 40.0% |
| ! | TGTTGTTCAGGTTCTTCTCT+AGG | - | Chr8:81442119-81442138 | MsG0880047059.01.T01:CDS | 40.0% |
| ! | TTGTTGTTGCTGCTGCTATT+AGG | + | Chr8:81442188-81442207 | None:intergenic | 40.0% |
| !! | AGCTAGCTCTTTCAGTTTTG+TGG | - | Chr8:81442977-81442996 | MsG0880047059.01.T01:CDS | 40.0% |
| !! | GAGAGAGTACTTAGAAGATG+TGG | - | Chr8:81442443-81442462 | MsG0880047059.01.T01:CDS | 40.0% |
| !! | GATACAGTGTTGATGGAAGA+AGG | + | Chr8:81441693-81441712 | None:intergenic | 40.0% |
| !! | GGAGTAGTTGCTAGTTCTAA+CGG | - | Chr8:81442365-81442384 | MsG0880047059.01.T01:CDS | 40.0% |
| !!! | ACTTTTTTTGAGATGGGGGA+GGG | - | Chr8:81443118-81443137 | MsG0880047059.01.T01:CDS | 40.0% |
| !!! | TACTTTTTTTGAGATGGGGG+AGG | - | Chr8:81443117-81443136 | MsG0880047059.01.T01:CDS | 40.0% |
| ACAGTTTCTCAAAACCGTGG+TGG | - | Chr8:81442590-81442609 | MsG0880047059.01.T01:CDS | 45.0% | |
| ATGCATTCTCTGTCATCACG+TGG | - | Chr8:81443159-81443178 | MsG0880047059.01.T01:CDS | 45.0% | |
| ATGGAAGCTATGAAAGGAGG+TGG | - | Chr8:81441429-81441448 | MsG0880047059.01.T01:three_prime_UTR | 45.0% | |
| CAGAACTCAGAAGTCCTCTA+TGG | - | Chr8:81443086-81443105 | MsG0880047059.01.T01:CDS | 45.0% | |
| CATCCTTACAGAAACAACCC+TGG | - | Chr8:81441507-81441526 | MsG0880047059.01.T01:three_prime_UTR | 45.0% | |
| CCATCTTTGCTTTCTGCTAG+AGG | - | Chr8:81442761-81442780 | MsG0880047059.01.T01:CDS | 45.0% | |
| CCTCTAGCAGAAAGCAAAGA+TGG | + | Chr8:81442764-81442783 | None:intergenic | 45.0% | |
| CTCTCTCTTTCATGCAATGG+TGG | + | Chr8:81442430-81442449 | None:intergenic | 45.0% | |
| CTTACAGAAACAACCCTGGT+GGG | - | Chr8:81441511-81441530 | MsG0880047059.01.T01:three_prime_UTR | 45.0% | |
| GAAACGGCATGAATAGGAAG+AGG | + | Chr8:81441591-81441610 | None:intergenic | 45.0% | |
| GGAGGTGGAAGAGTTAACAT+TGG | - | Chr8:81441444-81441463 | MsG0880047059.01.T01:three_prime_UTR | 45.0% | |
| GGTGGAAGAGTTAACATTGG+TGG | - | Chr8:81441447-81441466 | MsG0880047059.01.T01:three_prime_UTR | 45.0% | |
| GTGAATGGAGGAGGAAAACA+AGG | - | Chr8:81442560-81442579 | MsG0880047059.01.T01:CDS | 45.0% | |
| GTGGAAGTGGAAGATGAAGA+AGG | + | Chr8:81441654-81441673 | None:intergenic | 45.0% | |
| TCAACTGCAACACCAAGAAG+AGG | - | Chr8:81441927-81441946 | MsG0880047059.01.T01:three_prime_UTR | 45.0% | |
| TCTCTTTCATGCAATGGTGG+TGG | + | Chr8:81442427-81442446 | None:intergenic | 45.0% | |
| ! | AAAAAGCACAGATCCCACCA+GGG | + | Chr8:81441527-81441546 | None:intergenic | 45.0% |
| ! | AAAACCGTGGTGGAAAGAGT+TGG | - | Chr8:81442600-81442619 | MsG0880047059.01.T01:CDS | 45.0% |
| ! | AAACCGTGGTGGAAAGAGTT+GGG | - | Chr8:81442601-81442620 | MsG0880047059.01.T01:CDS | 45.0% |
| ! | ACAATGACGAGTAGTGGAAG+TGG | + | Chr8:81441667-81441686 | None:intergenic | 45.0% |
| ! | TCTGCTGATGATGCTGTGAA+TGG | - | Chr8:81442545-81442564 | MsG0880047059.01.T01:CDS | 45.0% |
| !! | ACAGTGTTGATGGAAGAAGG+AGG | + | Chr8:81441690-81441709 | None:intergenic | 45.0% |
| !!! | CTTTTTTTGAGATGGGGGAG+GGG | - | Chr8:81443119-81443138 | MsG0880047059.01.T01:CDS | 45.0% |
| AACCCCAACTCTTTCCACCA+CGG | + | Chr8:81442607-81442626 | None:intergenic | 50.0% | |
| AGGAGGACAATGACGAGTAG+TGG | + | Chr8:81441673-81441692 | None:intergenic | 50.0% | |
| CCTTACAGAAACAACCCTGG+TGG | - | Chr8:81441510-81441529 | MsG0880047059.01.T01:three_prime_UTR | 50.0% | |
| GATGATGCTGTGAATGGAGG+AGG | - | Chr8:81442551-81442570 | MsG0880047059.01.T01:CDS | 50.0% | |
| TGGTGGAAAGAGTTGGGGTT+GGG | - | Chr8:81442607-81442626 | MsG0880047059.01.T01:CDS | 50.0% | |
| TGTGGTAGCAGAAGCTTCTC+TGG | - | Chr8:81442260-81442279 | MsG0880047059.01.T01:CDS | 50.0% | |
| ! | AACCGTGGTGGAAAGAGTTG+GGG | - | Chr8:81442602-81442621 | MsG0880047059.01.T01:CDS | 50.0% |
| ! | CAAAAAGCACAGATCCCACC+AGG | + | Chr8:81441528-81441547 | None:intergenic | 50.0% |
| ! | GCTGATGATGCTGTGAATGG+AGG | - | Chr8:81442548-81442567 | MsG0880047059.01.T01:CDS | 50.0% |
| !! | CCACCAGGGTTGTTTCTGTA+AGG | + | Chr8:81441513-81441532 | None:intergenic | 50.0% |
| !! | CTTTCATGCAATGGTGGTGG+TGG | + | Chr8:81442424-81442443 | None:intergenic | 50.0% |
| ! | GTGGTGGAAAGAGTTGGGGT+TGG | - | Chr8:81442606-81442625 | MsG0880047059.01.T01:CDS | 55.0% |
| !! | TCATGCAATGGTGGTGGTGG+TGG | + | Chr8:81442421-81442440 | None:intergenic | 55.0% |
| !! | GGTGGTGGTGGTCTTGAGCA+CGG | + | Chr8:81442406-81442425 | None:intergenic | 60.0% |
| !! | TGCAATGGTGGTGGTGGTGG+TGG | + | Chr8:81442418-81442437 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 81441429 | 81443414 | 81441429 | ID=MsG0880047059.01;Name=MsG0880047059.01 |
| Chr8 | mRNA | 81441429 | 81443414 | 81441429 | ID=MsG0880047059.01.T01;Parent=MsG0880047059.01;Name=MsG0880047059.01.T01;_AED=0.20;_eAED=0.20;_QI=0|-1|1|1|-1|1|1|627|452 |
| Chr8 | exon | 81441429 | 81443414 | 81441429 | ID=MsG0880047059.01.T01:exon:10706;Parent=MsG0880047059.01.T01 |
| Chr8 | CDS | 81442056 | 81443414 | 81442056 | ID=MsG0880047059.01.T01:cds;Parent=MsG0880047059.01.T01 |
| Chr8 | three_prime_UTR | 81441429 | 81442055 | 81441429 | ID=MsG0880047059.01.T01:three_prime_utr;Parent=MsG0880047059.01.T01 |
| Gene Sequence |
| Protein sequence |
