AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041454.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041454.01.T04 MTR_7g111380 96.429 28 1 0 1 28 1 28 2.71e-13 57.4
MsG0780041454.01.T04 MTR_7g111450 89.286 28 3 0 1 28 1 28 3.54e-12 54.7
MsG0780041454.01.T01 MTR_7g111350 94.444 54 3 0 1 54 1 54 5.24e-30 100
MsG0780041454.01.T01 MTR_7g111450 83.333 54 9 0 1 54 1 54 1.49e-26 91.3
MsG0780041454.01.T01 MTR_7g111380 79.630 54 11 0 1 54 1 54 3.19e-25 88.2
MsG0780041454.01.T01 MTR_6g033495 66.667 54 18 0 1 54 1 54 2.87e-20 75.5
MsG0780041454.01.T01 MTR_4g130660 52.632 57 23 2 7 62 9 62 8.86e-13 57.4
MsG0780041454.01.T01 MTR_4g130675 63.830 47 16 1 7 52 9 55 1.94e-12 57.4
MsG0780041454.01.T02 MTR_7g111350 87.037 54 7 0 1 54 1 54 9.06e-29 96.7
MsG0780041454.01.T02 MTR_7g111380 85.185 54 8 0 1 54 1 54 7.34e-27 91.7
MsG0780041454.01.T02 MTR_7g111450 81.481 54 10 0 1 54 1 54 2.71e-26 90.5
MsG0780041454.01.T02 MTR_6g033495 67.308 52 17 0 1 52 1 52 3.46e-20 75.1
MsG0780041454.01.T02 MTR_4g130660 63.830 47 16 1 7 52 9 55 2.48e-13 58.2
MsG0780041454.01.T02 MTR_4g130675 65.957 47 15 1 7 52 9 55 3.97e-13 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041454.01.T01 AT3G05890 81.481 54 10 0 1 54 1 54 1.82e-26 91.3
MsG0780041454.01.T01 AT3G05880 81.481 54 10 0 1 54 1 54 5.52e-26 90.1
MsG0780041454.01.T01 AT2G38905 66.667 54 18 0 1 54 1 54 2.84e-21 78.2
MsG0780041454.01.T01 AT1G57550 56.000 50 22 0 5 54 3 52 8.84e-18 69.3
MsG0780041454.01.T01 AT4G30650 63.158 57 17 2 6 61 8 61 7.64e-16 65.1
MsG0780041454.01.T01 AT4G30660 58.065 62 22 2 2 62 4 62 2.66e-14 61.2
MsG0780041454.01.T01 AT4G30660 58.065 62 22 2 2 62 4 62 2.66e-14 61.2
MsG0780041454.01.T01 AT2G24040 64.583 48 16 1 7 53 9 56 1.08e-13 59.7
MsG0780041454.01.T01 AT4G28088 57.692 52 21 1 2 52 4 55 2.48e-13 58.5
MsG0780041454.01.T02 AT3G05880 81.481 54 10 0 1 54 1 54 1.79e-26 90.9
MsG0780041454.01.T02 AT3G05890 81.481 54 10 0 1 54 1 54 3.14e-26 90.1
MsG0780041454.01.T02 AT2G38905 73.077 52 14 0 1 52 1 52 3.56e-22 80.1
MsG0780041454.01.T02 AT1G57550 52.941 51 24 0 4 54 2 52 2.31e-17 67.8
MsG0780041454.01.T02 AT4G30650 70.833 48 13 1 6 52 8 55 6.38e-16 64.7
MsG0780041454.01.T02 AT2G24040 66.667 48 15 1 7 53 9 56 2.21e-14 60.8
MsG0780041454.01.T02 AT4G30660 73.913 46 11 1 8 52 10 55 2.62e-14 60.8
MsG0780041454.01.T02 AT4G30660 73.913 46 11 1 8 52 10 55 2.62e-14 60.8
MsG0780041454.01.T02 AT4G28088 57.692 52 21 1 2 52 4 55 1.82e-13 58.5

Find 19 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTTGATTCTCACCATTT+TGG 0.172785 7:+91109218 MsG0780041454.01.T02:CDS
TTCCAGGAAGATAGCCAAAA+AGG 0.273866 7:-91101161 None:intergenic
CTTGGTGTCTTCCTCAAGTT+TGG 0.278428 7:+91109082 MsG0780041454.01.T02:intron
TTGGTTGGTAGGTGGAGTTC+TGG 0.323016 7:+91101121 MsG0780041454.01.T01:intron
GCCATCATCCTTCCACCTCT+TGG 0.330206 7:+91109064 MsG0780041454.01.T02:intron
TATAAATACAGGTCGAGTTT+TGG 0.330231 7:+91109193 MsG0780041454.01.T02:intron
ATTATCACTAATGGTGTGTT+TGG 0.334636 7:+91101201 MsG0780041454.01.T01:CDS
TAGATAGCATAGAGAATTCC+AGG 0.399092 7:-91109249 None:intergenic
GCTATCTATATTATCACTAA+TGG 0.406553 7:+91101192 MsG0780041454.01.T01:CDS
CACTAATGGTGTGTTTGGTT+CGG 0.411408 7:+91101206 MsG0780041454.01.T01:CDS
TCCAGGAAGATAGCCCAAAA+TGG 0.427902 7:-91109232 None:intergenic
TAGATAGCATAGATAATTCC+AGG 0.429938 7:-91101177 None:intergenic
GGTGGAGTTCTGGATCTGTT+TGG 0.476430 7:+91101131 MsG0780041454.01.T01:intron
AAAGCAAGAAAGAAGAAAGA+AGG 0.481693 7:-91109128 None:intergenic
ACCAAGAGGTGGAAGGATGA+TGG 0.532473 7:-91109065 None:intergenic
TTACGTTGCAACCAAACTTG+AGG 0.615324 7:-91109093 None:intergenic
GGAAGACACCAAGAGGTGGA+AGG 0.626123 7:-91109072 None:intergenic
TTGAGGAAGACACCAAGAGG+TGG 0.632673 7:-91109076 None:intergenic
AACTTGAGGAAGACACCAAG+AGG 0.673612 7:-91109079 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTTTATTTTATTTT+TGG + Chr7:91108472-91108491 MsG0780041454.01.T02:intron 0.0%
!!! TTTTTTAATTTAAAATATTT+TGG + Chr7:91106742-91106761 MsG0780041454.01.T02:intron 0.0%
!! AAAAAAATATAGTATCATTT+AGG + Chr7:91107073-91107092 MsG0780041454.01.T02:intron 10.0%
!! AAAATAAAAAAAATTTGTGA+AGG - Chr7:91108467-91108486 None:intergenic 10.0%
!! AAAATCAAAATATCAAAAAT+GGG + Chr7:91100913-91100932 MsG0780041454.01.T01:intron 10.0%
!! AAACAATAAAAAAAAGTTAA+AGG + Chr7:91108267-91108286 MsG0780041454.01.T02:intron 10.0%
!! AAATATTGAATATTATTAGA+AGG - Chr7:91102964-91102983 None:intergenic 10.0%
!! AAATTATGAATTTCATTATT+TGG - Chr7:91102517-91102536 None:intergenic 10.0%
!! AATTATGAATTTCATTATTT+GGG - Chr7:91102516-91102535 None:intergenic 10.0%
!! GATTTAGTTATTATAATTAT+AGG + Chr7:91105834-91105853 MsG0780041454.01.T02:intron 10.0%
!! TAAATAATTAAGGTTATTAT+AGG + Chr7:91106407-91106426 MsG0780041454.01.T02:intron 10.0%
!! TGCAATAAATAAATAAATAA+AGG + Chr7:91108096-91108115 MsG0780041454.01.T02:intron 10.0%
!!! AATAGATATTTTTTTATTGT+AGG - Chr7:91101389-91101408 None:intergenic 10.0%
!!! AATGAAGTATTAAATAATTA+AGG + Chr7:91106397-91106416 MsG0780041454.01.T02:intron 10.0%
!!! AATGATACTATATTTTTTTT+TGG - Chr7:91107072-91107091 None:intergenic 10.0%
!!! ACAATTTTACTATTAATTTA+AGG + Chr7:91105889-91105908 MsG0780041454.01.T02:intron 10.0%
!!! ATAGATATTTTTTTATTGTA+GGG - Chr7:91101388-91101407 None:intergenic 10.0%
!!! ATGAATTTTTTAATATCTTT+CGG + Chr7:91103074-91103093 MsG0780041454.01.T02:intron 10.0%
!!! GAAATTCATAATTTTAAATA+AGG + Chr7:91102523-91102542 MsG0780041454.01.T02:intron 10.0%
!!! TCATTTTAACATTTTTTTAT+GGG - Chr7:91107418-91107437 None:intergenic 10.0%
!!! TTAGTATATTACTATTATTT+TGG + Chr7:91105944-91105963 MsG0780041454.01.T02:intron 10.0%
!!! TTCATTTTAACATTTTTTTA+TGG - Chr7:91107419-91107438 None:intergenic 10.0%
!! AATTAATTAGGATATTGTTT+AGG - Chr7:91108760-91108779 None:intergenic 15.0%
!! AGTAATAATTGAAAACATTT+AGG - Chr7:91106821-91106840 None:intergenic 15.0%
!! ATAAAACAAAATATATTTGG+AGG + Chr7:91108671-91108690 MsG0780041454.01.T02:intron 15.0%
!! CAAAATCAAAATATCAAAAA+TGG + Chr7:91100912-91100931 MsG0780041454.01.T01:intron 15.0%
!! TAGTATATATGTATTATGAA+AGG + Chr7:91101641-91101660 MsG0780041454.01.T02:intron 15.0%
!! TATACATTAGTACAAAAATA+TGG - Chr7:91104638-91104657 None:intergenic 15.0%
!! TATATATATATATACACTCA+TGG + Chr7:91103238-91103257 MsG0780041454.01.T02:intron 15.0%
!! TCAAAATATGACAATTAAAA+AGG + Chr7:91106493-91106512 MsG0780041454.01.T02:intron 15.0%
!!! AATATGATCTTTTTATTTGT+TGG - Chr7:91105216-91105235 None:intergenic 15.0%
!!! ACATCATGTTTTTATTTTTA+TGG - Chr7:91108439-91108458 None:intergenic 15.0%
!!! AGTTATATAATTTTTTTGAG+AGG + Chr7:91102170-91102189 MsG0780041454.01.T02:intron 15.0%
!!! ATACTTAAATAACTCTAAAA+CGG + Chr7:91102214-91102233 MsG0780041454.01.T02:intron 15.0%
!!! ATTTAATTTCAAATTCATCA+AGG + Chr7:91105255-91105274 MsG0780041454.01.T02:intron 15.0%
!!! ATTTTTTGATCCAATTTTAT+TGG + Chr7:91105748-91105767 MsG0780041454.01.T02:intron 15.0%
!!! TAGATATTTTTTTATTGTAG+GGG - Chr7:91101387-91101406 None:intergenic 15.0%
!!! TTCATTTTTCAATTAATTCA+AGG - Chr7:91106615-91106634 None:intergenic 15.0%
!! AAAGTGAAATGTATTGTATT+GGG - Chr7:91106218-91106237 None:intergenic 20.0%
!! AAATATGAACAATAGAAGTT+TGG + Chr7:91105420-91105439 MsG0780041454.01.T02:intron 20.0%
!! AAGAAAAAAAAAACGAGAAA+GGG - Chr7:91107814-91107833 None:intergenic 20.0%
!! AATATAGAGATTCTAACTTA+CGG + Chr7:91108413-91108432 MsG0780041454.01.T02:intron 20.0%
!! AATATCCTATAATCAATTGT+TGG - Chr7:91104110-91104129 None:intergenic 20.0%
!! AATTCTTGTGTTATAAATAC+AGG + Chr7:91109182-91109201 MsG0780041454.01.T02:intron 20.0%
!! ACACTATAATGAAATGAATA+AGG - Chr7:91108070-91108089 None:intergenic 20.0%
!! AGAAAATGTTAAAATGTGTA+AGG - Chr7:91108499-91108518 None:intergenic 20.0%
!! AGTGGAATAAAAATAAAAAG+TGG + Chr7:91101747-91101766 MsG0780041454.01.T02:intron 20.0%
!! ATTGAAAAAAAAACGTAGAA+AGG + Chr7:91102590-91102609 MsG0780041454.01.T02:intron 20.0%
!! CAAATAAATGTACATGTATA+GGG + Chr7:91103882-91103901 MsG0780041454.01.T02:intron 20.0%
!! CAACTCAAAATATTGAAAAT+GGG + Chr7:91109013-91109032 MsG0780041454.01.T02:intron 20.0%
!! CTATTGAAATAAATCAAACA+TGG + Chr7:91104451-91104470 MsG0780041454.01.T02:intron 20.0%
!! TAAATATATAGGGGTAATAT+AGG - Chr7:91106355-91106374 None:intergenic 20.0%
!! TAATTAGAGTCATATTGTAT+TGG - Chr7:91106178-91106197 None:intergenic 20.0%
!! TCAAACAAATTATATGTTCA+AGG + Chr7:91103272-91103291 MsG0780041454.01.T02:intron 20.0%
!! TCAACTCAAAATATTGAAAA+TGG + Chr7:91109012-91109031 MsG0780041454.01.T02:intron 20.0%
!! TGAATTGGATGAATAAAATA+GGG - Chr7:91107704-91107723 None:intergenic 20.0%
!! TGTCTTAAAATTTGAATGTT+GGG + Chr7:91102050-91102069 MsG0780041454.01.T02:intron 20.0%
!! TTACTATTAATTTAAGGACT+TGG + Chr7:91105895-91105914 MsG0780041454.01.T02:intron 20.0%
!! TTAGACTTAAACTTAATGAA+TGG + Chr7:91103414-91103433 MsG0780041454.01.T02:intron 20.0%
!! TTCATTCTTTATAGAAGATT+CGG + Chr7:91108031-91108050 MsG0780041454.01.T02:intron 20.0%
!! TTGAAAAAAAAACGTAGAAA+GGG + Chr7:91102591-91102610 MsG0780041454.01.T02:intron 20.0%
!! TTGAATTGGATGAATAAAAT+AGG - Chr7:91107705-91107724 None:intergenic 20.0%
!! TTGTCTTAAAATTTGAATGT+TGG + Chr7:91102049-91102068 MsG0780041454.01.T02:intron 20.0%
!!! AAGTTAGAATCTCTATATTT+TGG - Chr7:91108412-91108431 None:intergenic 20.0%
!!! AATCTACATTTTGAAACAAA+AGG + Chr7:91105623-91105642 MsG0780041454.01.T02:intron 20.0%
!!! CTACGTTTTTTTTTCAATTA+CGG - Chr7:91102588-91102607 None:intergenic 20.0%
!!! CTTTTATTTTAAAGGGTTTT+GGG - Chr7:91107140-91107159 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - Chr7:91106108-91106127 None:intergenic 20.0%
!!! TATTCAATATTTTTGTTGAC+AGG + Chr7:91102972-91102991 MsG0780041454.01.T02:intron 20.0%
!!! TCATGCTTAATTAATTGTTT+TGG + Chr7:91101102-91101121 MsG0780041454.01.T01:intron 20.0%
!!! TCGTTTGAAATATTTTTAAG+TGG - Chr7:91107024-91107043 None:intergenic 20.0%
!!! TCTTTTATTTTAAAGGGTTT+TGG - Chr7:91107141-91107160 None:intergenic 20.0%
!!! TTTGAAATATTTTTAAGTGG+AGG - Chr7:91107021-91107040 None:intergenic 20.0%
!!! TTTTACAAGATTATTGCTAA+CGG + Chr7:91107293-91107312 MsG0780041454.01.T02:intron 20.0%
! AAAAATATCGTGATCTATGT+TGG - Chr7:91106701-91106720 None:intergenic 25.0%
! AAAATATCGTGATCTATGTT+GGG - Chr7:91106700-91106719 None:intergenic 25.0%
! AAAATGAAAATAAGCTACTG+TGG + Chr7:91108638-91108657 MsG0780041454.01.T02:intron 25.0%
! AAACAAAAGGAAAACAAAGA+TGG + Chr7:91105636-91105655 MsG0780041454.01.T02:intron 25.0%
! AAAGAAAAAAGAAAGGAAGA+GGG - Chr7:91101025-91101044 None:intergenic 25.0%
! AAATTGAAGTTGAATCTTGA+TGG + Chr7:91104528-91104547 MsG0780041454.01.T02:intron 25.0%
! AAGATGCATCTTATTGATAT+AGG + Chr7:91105693-91105712 MsG0780041454.01.T02:intron 25.0%
! AAGATGGTATATAGATTGAA+TGG + Chr7:91105652-91105671 MsG0780041454.01.T02:intron 25.0%
! AAGTGACAATTATAAAGGAA+CGG - Chr7:91106263-91106282 None:intergenic 25.0%
! AATAACATGAATGGAATTGA+AGG - Chr7:91107610-91107629 None:intergenic 25.0%
! AGAAAGAAGTGATATACTTA+AGG - Chr7:91100855-91100874 None:intergenic 25.0%
! AGGAATTTAATGCAAAGATA+AGG + Chr7:91104850-91104869 MsG0780041454.01.T02:intron 25.0%
! AGTGATATAAAACAAGAACA+TGG - Chr7:91105160-91105179 None:intergenic 25.0%
! ATAAAGCTAGATTAGTAGAA+AGG + Chr7:91104830-91104849 MsG0780041454.01.T02:intron 25.0%
! ATAGATGTATTTGCATTACA+TGG + Chr7:91107836-91107855 MsG0780041454.01.T02:intron 25.0%
! ATCATCCAACAATTGATTAT+AGG + Chr7:91104102-91104121 MsG0780041454.01.T02:intron 25.0%
! ATGAATTTAGTTGCATGATA+TGG + Chr7:91103678-91103697 MsG0780041454.01.T02:intron 25.0%
! ATGATGTAACGTAAAGTAAA+AGG + Chr7:91102649-91102668 MsG0780041454.01.T02:intron 25.0%
! ATGGTACTTACAATAAATTG+AGG - Chr7:91101980-91101999 None:intergenic 25.0%
! ATGTAATGCAAATACATCTA+TGG - Chr7:91107837-91107856 None:intergenic 25.0%
! ATTGTGGAAAGAAAAAAGAA+AGG - Chr7:91101032-91101051 None:intergenic 25.0%
! CCAAATAAATGTACATGTAT+AGG + Chr7:91103881-91103900 MsG0780041454.01.T02:intron 25.0%
! CCTATACATGTACATTTATT+TGG - Chr7:91103884-91103903 None:intergenic 25.0%
! CTCTCTGCAATAAATATATA+GGG - Chr7:91106365-91106384 None:intergenic 25.0%
! GAAAGTGAAATGTATTGTAT+TGG - Chr7:91106219-91106238 None:intergenic 25.0%
! GAAATTGTAAAGAGAGAAAT+AGG + Chr7:91101233-91101252 MsG0780041454.01.T02:intron 25.0%
! GAAGAAAAAAAAAACGAGAA+AGG - Chr7:91107815-91107834 None:intergenic 25.0%
! GATAATCATGTTACTAATGA+CGG + Chr7:91104347-91104366 MsG0780041454.01.T02:intron 25.0%
! GATATGATGAATAACATGAA+TGG - Chr7:91107619-91107638 None:intergenic 25.0%
! GCTATCTATATTATCACTAA+TGG + Chr7:91101192-91101211 MsG0780041454.01.T01:CDS 25.0%
! GTTCAAAATGTAAATTGTTG+TGG - Chr7:91103919-91103938 None:intergenic 25.0%
! TAGAATATGCTTGAAACATA+AGG - Chr7:91104027-91104046 None:intergenic 25.0%
! TATTTGTATTGTGTACTACA+CGG + Chr7:91101605-91101624 MsG0780041454.01.T02:intron 25.0%
! TCTCTCTGCAATAAATATAT+AGG - Chr7:91106366-91106385 None:intergenic 25.0%
! TCTCTGCAATAAATATATAG+GGG - Chr7:91106364-91106383 None:intergenic 25.0%
! TGAATTTCATTATTTGGGTA+CGG - Chr7:91102511-91102530 None:intergenic 25.0%
! TGACATTGTGAATTCTATAA+AGG + Chr7:91103164-91103183 MsG0780041454.01.T02:intron 25.0%
! TGCAAAAGTGACAATTATAA+AGG - Chr7:91106268-91106287 None:intergenic 25.0%
! TGGTACTTACAATAAATTGA+GGG - Chr7:91101979-91101998 None:intergenic 25.0%
! TGTAGTACACAATACAAATA+CGG - Chr7:91101605-91101624 None:intergenic 25.0%
! TTAAATAAGGGAAAATCTCA+TGG + Chr7:91102536-91102555 MsG0780041454.01.T02:intron 25.0%
!! AATATACATGTTTTCCTGTA+TGG - Chr7:91103640-91103659 None:intergenic 25.0%
!! AGATAAATTTTCACTCATTG+AGG + Chr7:91102261-91102280 MsG0780041454.01.T02:intron 25.0%
!! GATAAATTTTCACTCATTGA+GGG + Chr7:91102262-91102281 MsG0780041454.01.T02:intron 25.0%
!! TGTTTAGGATATCATTATCA+CGG - Chr7:91108745-91108764 None:intergenic 25.0%
!! TTGAAATGACTCAGTTATTT+TGG - Chr7:91106131-91106150 None:intergenic 25.0%
!! TTTCTTCACGATACTTTTAT+TGG - Chr7:91103785-91103804 None:intergenic 25.0%
!!! AAATAAATTAAGGCCTTGTT+TGG + Chr7:91108179-91108198 MsG0780041454.01.T02:intron 25.0%
!!! AATTAATTGTTTTGGTTGGT+AGG + Chr7:91101110-91101129 MsG0780041454.01.T01:intron 25.0%
!!! AGAAAGGGTATTTTATTTTG+AGG + Chr7:91102606-91102625 MsG0780041454.01.T02:intron 25.0%
!!! AGTAAAAGTATTTGTTGTCT+TGG + Chr7:91106457-91106476 MsG0780041454.01.T02:intron 25.0%
!!! ATTGGACATGTATTTTGAAA+CGG - Chr7:91104579-91104598 None:intergenic 25.0%
!!! CCATTTACAATCACTTTTTT+GGG - Chr7:91108845-91108864 None:intergenic 25.0%
!!! GAGAAAGAAAGTGTTAAAAA+AGG - Chr7:91108977-91108996 None:intergenic 25.0%
!!! GCTTAATTAATTGTTTTGGT+TGG + Chr7:91101106-91101125 MsG0780041454.01.T01:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - Chr7:91106109-91106128 None:intergenic 25.0%
!!! TAAAAGTATCGTGAAGAAAA+TGG + Chr7:91103786-91103805 MsG0780041454.01.T02:intron 25.0%
!!! TAAAGGATACATGTTTTTGA+AGG + Chr7:91108284-91108303 MsG0780041454.01.T02:intron 25.0%
!!! TCCATTTACAATCACTTTTT+TGG - Chr7:91108846-91108865 None:intergenic 25.0%
!!! TCTCCTTTAACATACTTTTT+AGG - Chr7:91103853-91103872 None:intergenic 25.0%
!!! TGAAATGACTCAGTTATTTT+GGG - Chr7:91106130-91106149 None:intergenic 25.0%
!!! TTATTTTTACCCAAATGAGT+CGG + Chr7:91108711-91108730 MsG0780041454.01.T02:intron 25.0%
!!! TTTTGCTCTGTTTTTAACTT+CGG + Chr7:91103122-91103141 MsG0780041454.01.T02:intron 25.0%
!!! TTTTTTCAATTACGGAAGTA+GGG - Chr7:91102580-91102599 None:intergenic 25.0%
!!! TTTTTTTCAATTACGGAAGT+AGG - Chr7:91102581-91102600 None:intergenic 25.0%
AAAATCCACTCTCAAAATAC+TGG - Chr7:91107364-91107383 None:intergenic 30.0%
AAAATCTCATGGTTATGTGA+AGG + Chr7:91102547-91102566 MsG0780041454.01.T02:intron 30.0%
AAACTTGCAACAATTTCACA+AGG + Chr7:91101719-91101738 MsG0780041454.01.T02:intron 30.0%
AAAGCAAGAAAGAAGAAAGA+AGG - Chr7:91109131-91109150 None:intergenic 30.0%
AAATCTCATGGTTATGTGAA+GGG + Chr7:91102548-91102567 MsG0780041454.01.T02:intron 30.0%
AAATGAGATAATGCGTTCAA+TGG + Chr7:91107186-91107205 MsG0780041454.01.T02:intron 30.0%
AACTTGCAACAATTTCACAA+GGG + Chr7:91101720-91101739 MsG0780041454.01.T02:intron 30.0%
AAGAACAAGTAGAGACAAAA+AGG - Chr7:91102009-91102028 None:intergenic 30.0%
AAGATGGTTGTATAATCCTT+TGG - Chr7:91104310-91104329 None:intergenic 30.0%
AATGAAGAAATAGAATGAGC+TGG + Chr7:91107433-91107452 MsG0780041454.01.T02:intron 30.0%
ACCATACAATGCTCAATTAT+CGG - Chr7:91105310-91105329 None:intergenic 30.0%
ACTTCATCACATTTAAAGAG+AGG - Chr7:91102834-91102853 None:intergenic 30.0%
AGAACAAGTAGAGACAAAAA+GGG - Chr7:91102008-91102027 None:intergenic 30.0%
AGAGACAAAAAGGGTAAAAA+TGG - Chr7:91101999-91102018 None:intergenic 30.0%
AGCATATTCTAGATCAACAA+AGG + Chr7:91104036-91104055 MsG0780041454.01.T02:intron 30.0%
ATAATCTTCTCTCCTTTACT+AGG - Chr7:91104136-91104155 None:intergenic 30.0%
ATAGAAACGTACATAACATG+TGG + Chr7:91104996-91105015 MsG0780041454.01.T02:intron 30.0%
ATAGAAACGTACATAACATG+TGG - Chr7:91105015-91104996 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG - Chr7:91104597-91104616 None:intergenic 30.0%
ATGCAGTTCATGAAACAATT+TGG + Chr7:91103959-91103978 MsG0780041454.01.T02:intron 30.0%
ATTATCACTAATGGTGTGTT+TGG + Chr7:91101201-91101220 MsG0780041454.01.T01:CDS 30.0%
ATTATTGCGCAAAGATGTAA+AGG + Chr7:91104151-91104170 MsG0780041454.01.T02:intron 30.0%
ATTGAAACTATGATGTTGGT+TGG + Chr7:91104077-91104096 MsG0780041454.01.T02:intron 30.0%
CAAAAAGCAAAGAAACCATA+TGG - Chr7:91107936-91107955 None:intergenic 30.0%
CAAGATTGAAACTATGATGT+TGG + Chr7:91104073-91104092 MsG0780041454.01.T02:intron 30.0%
CATATGTTGCACATAACAAA+TGG + Chr7:91108538-91108557 MsG0780041454.01.T02:intron 30.0%
CATCTTCACACTTTAATCAA+AGG + Chr7:91105353-91105372 MsG0780041454.01.T02:intron 30.0%
CCCAAAAAAGTGATTGTAAA+TGG + Chr7:91108842-91108861 MsG0780041454.01.T02:intron 30.0%
CTTTGATTAAAGTGTGAAGA+TGG - Chr7:91105355-91105374 None:intergenic 30.0%
GAAAGAAAAAAGAAAGGAAG+AGG - Chr7:91101026-91101045 None:intergenic 30.0%
GAATTGGATTCGATAATAGT+TGG + Chr7:91108787-91108806 MsG0780041454.01.T02:intron 30.0%
GACAATTAAAAAGGAACAGA+GGG + Chr7:91106502-91106521 MsG0780041454.01.T02:intron 30.0%
GACCTCTCAAAGAAAAATTA+GGG - Chr7:91102134-91102153 None:intergenic 30.0%
GGTACTTACAATAAATTGAG+GGG - Chr7:91101978-91101997 None:intergenic 30.0%
TAAACATCAATCCTTGAAGA+TGG - Chr7:91104326-91104345 None:intergenic 30.0%
TAATTCAGACGGGATTAATT+CGG + Chr7:91107470-91107489 MsG0780041454.01.T02:intron 30.0%
TAGATAGCATAGATAATTCC+AGG - Chr7:91101180-91101199 None:intergenic 30.0%
TAGGACAAAACGTAAAGTAT+TGG - Chr7:91101689-91101708 None:intergenic 30.0%
TAGGATATTTGACCTAGTAA+AGG + Chr7:91104121-91104140 MsG0780041454.01.T02:intron 30.0%
TATTCATTCCTCACTTTAGA+AGG - Chr7:91103354-91103373 None:intergenic 30.0%
TCAATTTCCTTCTTATCGTA+AGG - Chr7:91104492-91104511 None:intergenic 30.0%
TGAAGGTTCGGAAAAATTAA+AGG + Chr7:91108301-91108320 MsG0780041454.01.T02:intron 30.0%
TGACAATTAAAAAGGAACAG+AGG + Chr7:91106501-91106520 MsG0780041454.01.T02:intron 30.0%
TGACCTCTCAAAGAAAAATT+AGG - Chr7:91102135-91102154 None:intergenic 30.0%
TTACTTCCAAACCAAATTTG+AGG - Chr7:91100996-91101015 None:intergenic 30.0%
TTGAGAGTGAAATGAATTTC+TGG - Chr7:91103547-91103566 None:intergenic 30.0%
TTTGATCAAACATAAGAGAG+TGG + Chr7:91103706-91103725 MsG0780041454.01.T02:intron 30.0%
! AACCCTAATTTTTCTTTGAG+AGG + Chr7:91102129-91102148 MsG0780041454.01.T02:intron 30.0%
! AGTAGATTTGATGTGTTGTT+TGG + Chr7:91101296-91101315 MsG0780041454.01.T02:intron 30.0%
! AGTTGATGTGATGTTTATGT+CGG + Chr7:91106650-91106669 MsG0780041454.01.T02:intron 30.0%
! ATAAGGAGTTGATTATTCTG+AGG + Chr7:91104867-91104886 MsG0780041454.01.T02:intron 30.0%
! ATGACATGTCATGTTTTCAT+TGG + Chr7:91105543-91105562 MsG0780041454.01.T02:intron 30.0%
! ATGTTTGATTCTCACCATTT+TGG + Chr7:91109218-91109237 MsG0780041454.01.T02:CDS 30.0%
! CTTTGAGAAATTCACATTGT+TGG + Chr7:91103739-91103758 MsG0780041454.01.T02:intron 30.0%
! GAAGAAGTGTAATTCTTAGT+TGG - Chr7:91102895-91102914 None:intergenic 30.0%
! GAGCCTAAAAAGTATGTTAA+AGG + Chr7:91103847-91103866 MsG0780041454.01.T02:intron 30.0%
! GAGGGAGTATATAAATAAAG+GGG - Chr7:91106241-91106260 None:intergenic 30.0%
! GGAGGGAGTATATAAATAAA+GGG - Chr7:91106242-91106261 None:intergenic 30.0%
! TATAAATACAGGTCGAGTTT+TGG + Chr7:91109193-91109212 MsG0780041454.01.T02:intron 30.0%
! TCAATGGCGTAAATTTTTAC+AGG + Chr7:91107202-91107221 MsG0780041454.01.T02:intron 30.0%
! TGTTTGATTCTCACCATTTT+GGG + Chr7:91109219-91109238 MsG0780041454.01.T02:CDS 30.0%
! TTAAGGACACTTTAGTTTAC+AGG - Chr7:91100838-91100857 None:intergenic 30.0%
!! ACATACTTTTTAGGCTCATT+TGG - Chr7:91103844-91103863 None:intergenic 30.0%
!! ATATTCCAGTATTTTGAGAG+TGG + Chr7:91107356-91107375 MsG0780041454.01.T02:intron 30.0%
!! ATTTTTCTTTGAGAGGTCAT+TGG + Chr7:91102136-91102155 MsG0780041454.01.T02:intron 30.0%
!! CTTAAATAACTCTAAAACGG+AGG + Chr7:91102217-91102236 MsG0780041454.01.T02:intron 30.0%
!! CTTGGACATGTATTTTGAAA+CGG + Chr7:91104800-91104819 MsG0780041454.01.T02:intron 30.0%
!! GATACATGTTTTTGAAGGTT+CGG + Chr7:91108289-91108308 MsG0780041454.01.T02:intron 30.0%
!! GGGAGTATTATTTAACAAGT+TGG - Chr7:91104555-91104574 None:intergenic 30.0%
!! TAAGTGGAGGCTTTTTATTT+TGG - Chr7:91107008-91107027 None:intergenic 30.0%
!! TCAATATTTTTGTTGACAGG+TGG + Chr7:91102975-91102994 MsG0780041454.01.T02:intron 30.0%
!! TTGTTAGTTGATAAAGACGA+GGG - Chr7:91108922-91108941 None:intergenic 30.0%
!! TTTTATTTCGTCGACGTTTT+TGG + Chr7:91105804-91105823 MsG0780041454.01.T02:intron 30.0%
!!! GATTTTGAGTTCAAGTTAGA+AGG - Chr7:91100899-91100918 None:intergenic 30.0%
!!! GGTATTTTATTTTGAGGACA+GGG + Chr7:91102612-91102631 MsG0780041454.01.T02:intron 30.0%
AAACATTTACGCTCTGTTTG+AGG + Chr7:91103608-91103627 MsG0780041454.01.T02:intron 35.0%
AGAAAATGGGTCAGATATTC+CGG - Chr7:91106095-91106114 None:intergenic 35.0%
AGAACTACCTTACGATAAGA+AGG + Chr7:91104482-91104501 MsG0780041454.01.T02:intron 35.0%
AGAAGAGAGATAAAAACACG+TGG - Chr7:91101826-91101845 None:intergenic 35.0%
AGAGAGGAAAGTGAACAAAA+TGG - Chr7:91104376-91104395 None:intergenic 35.0%
AGTGACCAAATCCAATTTCT+TGG - Chr7:91102763-91102782 None:intergenic 35.0%
ATAGAGAAGAGAGAAAGAGT+AGG - Chr7:91101905-91101924 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG + Chr7:91106538-91106557 MsG0780041454.01.T02:intron 35.0%
ATGAACAAGATTCTTTGAGC+CGG - Chr7:91103198-91103217 None:intergenic 35.0%
ATGACATGTCATGTTTCCAT+TGG - Chr7:91105035-91105054 None:intergenic 35.0%
ATGGTTGTATAATCCTTTGG+AGG - Chr7:91104307-91104326 None:intergenic 35.0%
CACATTAATTCGTCTAACGT+AGG + Chr7:91107668-91107687 MsG0780041454.01.T02:intron 35.0%
CACCAAAACTATTAAGGCAA+CGG - Chr7:91105974-91105993 None:intergenic 35.0%
CATATGTAAAGTGGTTGACT+TGG + Chr7:91104782-91104801 MsG0780041454.01.T02:intron 35.0%
CCTGGTAATTTAATTCAGAC+GGG + Chr7:91107460-91107479 MsG0780041454.01.T02:intron 35.0%
CTATGTCAAACTGTTGCATT+TGG - Chr7:91104207-91104226 None:intergenic 35.0%
CTTGACATCAAATTGACACA+AGG - Chr7:91104964-91104983 None:intergenic 35.0%
GAAGAGAGATAAAAACACGT+GGG - Chr7:91101825-91101844 None:intergenic 35.0%
GACAATTATAAAGGAACGGA+GGG - Chr7:91106259-91106278 None:intergenic 35.0%
GATTGCGTGTTAAAATGTTC+TGG - Chr7:91103471-91103490 None:intergenic 35.0%
GCCTGGTAATTTAATTCAGA+CGG + Chr7:91107459-91107478 MsG0780041454.01.T02:intron 35.0%
GGATTATACAACCATCTTCA+AGG + Chr7:91104312-91104331 MsG0780041454.01.T02:intron 35.0%
GTGAATTTCTCAAAGATGTC+AGG - Chr7:91103734-91103753 None:intergenic 35.0%
GTTACTGCATCAAATCCAAA+TGG + Chr7:91107522-91107541 MsG0780041454.01.T02:intron 35.0%
TAAAGTGATAGGACATAGGA+GGG + Chr7:91107228-91107247 MsG0780041454.01.T02:intron 35.0%
TAACGGTCAAAATTGTGCAT+TGG + Chr7:91104759-91104778 MsG0780041454.01.T02:intron 35.0%
TAGATAGCATAGAGAATTCC+AGG - Chr7:91109252-91109271 None:intergenic 35.0%
TAGGCTCATTTGGATGTTTA+AGG - Chr7:91103834-91103853 None:intergenic 35.0%
TATATTATCCTCTCTTACCC+TGG - Chr7:91108208-91108227 None:intergenic 35.0%
TCTCTTCTCTTTCCTTAAAC+CGG - Chr7:91105465-91105484 None:intergenic 35.0%
TGAACACTGAAAGATAACAC+TGG + Chr7:91104413-91104432 MsG0780041454.01.T02:intron 35.0%
TGAATCACTTACACTGTGTT+TGG - Chr7:91101938-91101957 None:intergenic 35.0%
TGACAATTATAAAGGAACGG+AGG - Chr7:91106260-91106279 None:intergenic 35.0%
TGAGATCATTACATCAGTGA+TGG + Chr7:91104912-91104931 MsG0780041454.01.T02:intron 35.0%
TGGCATTTACAAACATCCAA+TGG + Chr7:91105016-91105035 MsG0780041454.01.T02:intron 35.0%
TGTCTTCCTCAAATTTGGTT+TGG + Chr7:91100987-91101006 MsG0780041454.01.T01:CDS 35.0%
TTCAAGGTGAACACTATAGT+CGG + Chr7:91103288-91103307 MsG0780041454.01.T02:intron 35.0%
TTCTATAAAGGCTGTTACTC+CGG + Chr7:91103176-91103195 MsG0780041454.01.T02:intron 35.0%
TTGTAAATGGAAACGTTAGC+TGG + Chr7:91108855-91108874 MsG0780041454.01.T02:intron 35.0%
TTTACAGGAGGTAAAGTGAT+AGG + Chr7:91107217-91107236 MsG0780041454.01.T02:intron 35.0%
TTTCACTCATTGAGGGTAAA+GGG + Chr7:91102269-91102288 MsG0780041454.01.T02:intron 35.0%
! ACTTTGGAGAGACTAAAATC+AGG + Chr7:91101792-91101811 MsG0780041454.01.T02:intron 35.0%
! ATGAAGTGTCAGTTATTGGT+TGG + Chr7:91102847-91102866 MsG0780041454.01.T02:intron 35.0%
! ATGGCGTAAATTTTTACAGG+AGG + Chr7:91107205-91107224 MsG0780041454.01.T02:intron 35.0%
! ATTGGTTGGTTGTGATTATG+TGG + Chr7:91102861-91102880 MsG0780041454.01.T02:intron 35.0%
! CGGAGGGAGTATATAAATAA+AGG - Chr7:91106243-91106262 None:intergenic 35.0%
! GTAGCATTGGATAGTGAAAA+AGG + Chr7:91104934-91104953 MsG0780041454.01.T02:intron 35.0%
! TCCGATAATTGAGCATTGTA+TGG + Chr7:91105306-91105325 MsG0780041454.01.T02:intron 35.0%
! TGTGATGAAGTGTCAGTTAT+TGG + Chr7:91102843-91102862 MsG0780041454.01.T02:intron 35.0%
! TTTTCACTCATTGAGGGTAA+AGG + Chr7:91102268-91102287 MsG0780041454.01.T02:intron 35.0%
!! AAATCCAAATGGTGTTGTGT+GGG + Chr7:91107533-91107552 MsG0780041454.01.T02:intron 35.0%
!! AAGCATCTTCTAGCTTGAAT+TGG - Chr7:91107719-91107738 None:intergenic 35.0%
!! ATTTCTGGTTATGCAGTTTG+AGG - Chr7:91103532-91103551 None:intergenic 35.0%
!! CAATTTCACAAGGGTATTAG+TGG + Chr7:91101729-91101748 MsG0780041454.01.T02:intron 35.0%
!! GAGAGTGGATTTTGCATAAA+CGG + Chr7:91107371-91107390 MsG0780041454.01.T02:intron 35.0%
!! GTTGTTAGTTGATAAAGACG+AGG - Chr7:91108923-91108942 None:intergenic 35.0%
!! TCAGGTGTTTCCTTTTGTTT+GGG + Chr7:91106039-91106058 MsG0780041454.01.T02:intron 35.0%
!! TTTCTGGTTATGCAGTTTGA+GGG - Chr7:91103531-91103550 None:intergenic 35.0%
!!! GACATGTATTTTGAAACGGA+GGG + Chr7:91104804-91104823 MsG0780041454.01.T02:intron 35.0%
!!! GACATGTATTTTGAAACGGA+GGG - Chr7:91104823-91104804 None:intergenic 35.0%
!!! GGGTATTTTATTTTGAGGAC+AGG + Chr7:91102611-91102630 MsG0780041454.01.T02:intron 35.0%
!!! TAATTGTTTTGGTTGGTAGG+TGG + Chr7:91101113-91101132 MsG0780041454.01.T01:intron 35.0%
!!! TCACAATGTCATTTTCACAC+AGG - Chr7:91103155-91103174 None:intergenic 35.0%
!!! TTTTATTTTGAGGACAGGGA+AGG + Chr7:91102616-91102635 MsG0780041454.01.T02:intron 35.0%
AAAATTACCCCACAGTCACA+AGG - Chr7:91101071-91101090 None:intergenic 40.0%
AACCAAGGACCTTAAAGATC+AGG + Chr7:91102403-91102422 MsG0780041454.01.T02:intron 40.0%
AATTCGTCTAACGTAGGAGT+AGG + Chr7:91107674-91107693 MsG0780041454.01.T02:intron 40.0%
AATTTGAGGAAGACACCAAG+AGG - Chr7:91100982-91101001 None:intergenic 40.0%
ACGAGTCATCTAAGAACGTT+AGG + Chr7:91104000-91104019 MsG0780041454.01.T02:intron 40.0%
ACTTACACTGTGTTTGGTTG+AGG - Chr7:91101932-91101951 None:intergenic 40.0%
ACTTCAGAATCCACAAAGAG+AGG - Chr7:91104392-91104411 None:intergenic 40.0%
AGATATTCTTGGGTAGTCAC+AGG + Chr7:91102736-91102755 MsG0780041454.01.T02:intron 40.0%
AGGAAAGGAAAAGGTCATTG+TGG - Chr7:91101048-91101067 None:intergenic 40.0%
AGGTTTGTGCCTGATCTTTA+AGG - Chr7:91102415-91102434 None:intergenic 40.0%
ATCATGAGTCATCGTTGTGA+GGG + Chr7:91102998-91103017 MsG0780041454.01.T02:intron 40.0%
ATGCTTCGACGAGATATTCT+TGG + Chr7:91102725-91102744 MsG0780041454.01.T02:intron 40.0%
ATTACACTTCTTCGACAGCA+AGG + Chr7:91102902-91102921 MsG0780041454.01.T02:intron 40.0%
ATTGCGCAAAGATGTAAAGG+TGG + Chr7:91104154-91104173 MsG0780041454.01.T02:intron 40.0%
CAATAGAAGTTTGGCGTTTC+TGG + Chr7:91105429-91105448 MsG0780041454.01.T02:intron 40.0%
CACTAATGGTGTGTTTGGTT+CGG + Chr7:91101206-91101225 MsG0780041454.01.T01:CDS 40.0%
CAGGTCCAAGAAATTGGATT+TGG + Chr7:91102755-91102774 MsG0780041454.01.T02:intron 40.0%
CCCGTCTGAATTAAATTACC+AGG - Chr7:91107463-91107482 None:intergenic 40.0%
CCTTGGTTCAAAGATGGTAA+AGG - Chr7:91102391-91102410 None:intergenic 40.0%
CCTTTACCATCTTTGAACCA+AGG + Chr7:91102388-91102407 MsG0780041454.01.T02:intron 40.0%
CGAGTCATCTAAGAACGTTA+GGG + Chr7:91104001-91104020 MsG0780041454.01.T02:intron 40.0%
CTTTCTCTTTGCAACCAAAC+AGG + Chr7:91101848-91101867 MsG0780041454.01.T02:intron 40.0%
GAAAATGGGTCAGATATTCC+GGG - Chr7:91106094-91106113 None:intergenic 40.0%
GAAAGAGTAGGCAGAGAAAA+AGG - Chr7:91101893-91101912 None:intergenic 40.0%
GAGGTAAAGTGATAGGACAT+AGG + Chr7:91107224-91107243 MsG0780041454.01.T02:intron 40.0%
GATCTATACCACGATGCAAA+AGG - Chr7:91105106-91105125 None:intergenic 40.0%
GCAGACCACCAAAACTATTA+AGG - Chr7:91105980-91105999 None:intergenic 40.0%
GGTGAAAAACCCCAAACAAA+AGG - Chr7:91106052-91106071 None:intergenic 40.0%
GTAAAGTGATAGGACATAGG+AGG + Chr7:91107227-91107246 MsG0780041454.01.T02:intron 40.0%
GTACGATCCATATTCACATG+CGG - Chr7:91107908-91107927 None:intergenic 40.0%
GTTCAAAGATGGTAAAGGAG+AGG - Chr7:91102386-91102405 None:intergenic 40.0%
GTTCTTAGATGACTCGTTGT+AGG - Chr7:91103997-91104016 None:intergenic 40.0%
TAACATGCTCATTGAGCGTT+GGG - Chr7:91107262-91107281 None:intergenic 40.0%
TAAGGTCCTTGGTTCAAAGA+TGG - Chr7:91102397-91102416 None:intergenic 40.0%
TACATCAGTGATGGTAGCAT+TGG + Chr7:91104921-91104940 MsG0780041454.01.T02:intron 40.0%
TACCCGTTTGCAATTCTATG+TGG + Chr7:91103505-91103524 MsG0780041454.01.T02:intron 40.0%
TACGATCCATATTCACATGC+GGG - Chr7:91107907-91107926 None:intergenic 40.0%
TAGTCACAGGTCCAAGAAAT+TGG + Chr7:91102749-91102768 MsG0780041454.01.T02:intron 40.0%
TCAAGCTAGAAGATGCTTTG+TGG + Chr7:91107721-91107740 MsG0780041454.01.T02:intron 40.0%
TCAAGGTGAACACTATAGTC+GGG + Chr7:91103289-91103308 MsG0780041454.01.T02:intron 40.0%
TCATTTCACTCTCAACTGCT+AGG + Chr7:91103552-91103571 MsG0780041454.01.T02:intron 40.0%
TCCAGGAAGATAGCCAAAAA+GGG - Chr7:91101163-91101182 None:intergenic 40.0%
TCCTACTTTGATGCTTGAAG+AGG + Chr7:91104229-91104248 MsG0780041454.01.T02:intron 40.0%
TCCTCTTCAAGCATCAAAGT+AGG - Chr7:91104233-91104252 None:intergenic 40.0%
TCGGGGACATCCAATAAAAT+TGG - Chr7:91105761-91105780 None:intergenic 40.0%
TCTCTCTTTCTTCGCTACTT+TGG + Chr7:91101776-91101795 MsG0780041454.01.T02:intron 40.0%
TGCAAGTTTGCAACATGCAT+AGG - Chr7:91101708-91101727 None:intergenic 40.0%
TGCTTCGACGAGATATTCTT+GGG + Chr7:91102726-91102745 MsG0780041454.01.T02:intron 40.0%
TGTGAAAAACCAAACTGGCT+CGG + Chr7:91106543-91106562 MsG0780041454.01.T02:intron 40.0%
TGTTCACTTTCCTCTCTTTG+TGG + Chr7:91104379-91104398 MsG0780041454.01.T02:intron 40.0%
TTAACATGCTCATTGAGCGT+TGG - Chr7:91107263-91107282 None:intergenic 40.0%
TTACGTTGCAACCAAACTTG+AGG - Chr7:91109096-91109115 None:intergenic 40.0%
TTCACTCCACGTCCTATAAA+TGG + Chr7:91108886-91108905 MsG0780041454.01.T02:intron 40.0%
TTCCAGGAAGATAGCCAAAA+AGG - Chr7:91101164-91101183 None:intergenic 40.0%
TTGAAGTAGAAAGCCTCCAA+AGG + Chr7:91104291-91104310 MsG0780041454.01.T02:intron 40.0%
TTTATAGGACGTGGAGTGAA+TGG - Chr7:91108886-91108905 None:intergenic 40.0%
! GACCGTTGCCTTAATAGTTT+TGG + Chr7:91105969-91105988 MsG0780041454.01.T02:intron 40.0%
! GTAAACTGACCGACTCATTT+GGG - Chr7:91108723-91108742 None:intergenic 40.0%
! GTCAGGTGTTTCCTTTTGTT+TGG + Chr7:91106038-91106057 MsG0780041454.01.T02:intron 40.0%
! GTGCATTGGCATATGTAAAG+TGG + Chr7:91104773-91104792 MsG0780041454.01.T02:intron 40.0%
! GTTTGAGGTAGAATCCATAC+AGG + Chr7:91103623-91103642 MsG0780041454.01.T02:intron 40.0%
! TACAGGCTGTTGTTGTTGTT+AGG - Chr7:91100821-91100840 None:intergenic 40.0%
!! AAAGTATTGGCTGTGATTGG+TGG - Chr7:91101676-91101695 None:intergenic 40.0%
!! AGTTCTGAACTTCTCCTGTT+TGG - Chr7:91101865-91101884 None:intergenic 40.0%
!! CAAATCCAAATGGTGTTGTG+TGG + Chr7:91107532-91107551 MsG0780041454.01.T02:intron 40.0%
!! CAGGTGTTTCCTTTTGTTTG+GGG + Chr7:91106040-91106059 MsG0780041454.01.T02:intron 40.0%
!! CATTGAGGGTAAAGGGTATT+TGG + Chr7:91102276-91102295 MsG0780041454.01.T02:intron 40.0%
!! CGTAAAGTATTGGCTGTGAT+TGG - Chr7:91101679-91101698 None:intergenic 40.0%
!! CTTGGTGTCTTCCTCAAATT+TGG + Chr7:91100982-91101001 MsG0780041454.01.T01:CDS 40.0%
!! TTAGTTGATAAAGACGAGGG+AGG - Chr7:91108919-91108938 None:intergenic 40.0%
!!! CGTTGCCTTAATAGTTTTGG+TGG + Chr7:91105972-91105991 MsG0780041454.01.T02:intron 40.0%
!!! GGACATGTATTTTGAAACGG+AGG + Chr7:91104803-91104822 MsG0780041454.01.T02:intron 40.0%
!!! GGACATGTATTTTGAAACGG+AGG - Chr7:91104822-91104803 None:intergenic 40.0%
AACTTGAGGAAGACACCAAG+AGG - Chr7:91109082-91109101 None:intergenic 45.0%
ACAGTTACGGGAAGCAACAT+AGG + Chr7:91107561-91107580 MsG0780041454.01.T02:intron 45.0%
ACCGTAACGTGTTGGAAGAA+TGG + Chr7:91106015-91106034 MsG0780041454.01.T02:intron 45.0%
AGCAAGGAGACTACGTAAAG+TGG + Chr7:91103578-91103597 MsG0780041454.01.T02:intron 45.0%
AGTAAAAGGAAGAAGACGCG+TGG + Chr7:91102663-91102682 MsG0780041454.01.T02:intron 45.0%
ATAGAATGAGCTGGATTGCC+TGG + Chr7:91107442-91107461 MsG0780041454.01.T02:intron 45.0%
ATCTATGTTGGGTACACGTG+GGG - Chr7:91106689-91106708 None:intergenic 45.0%
ATGTCACCCGCATGTGAATA+TGG + Chr7:91107898-91107917 MsG0780041454.01.T02:intron 45.0%
CAGTTACGGGAAGCAACATA+GGG + Chr7:91107562-91107581 MsG0780041454.01.T02:intron 45.0%
CCAACTTCCAAGTGATCTCT+TGG - Chr7:91102442-91102461 None:intergenic 45.0%
CCAAGAGATCACTTGGAAGT+TGG + Chr7:91102439-91102458 MsG0780041454.01.T02:intron 45.0%
CCAAGTGATCTCTTGGTTAG+AGG - Chr7:91102435-91102454 None:intergenic 45.0%
CCCATTCTTCCAACACGTTA+CGG - Chr7:91106019-91106038 None:intergenic 45.0%
CCGTAACGTGTTGGAAGAAT+GGG + Chr7:91106016-91106035 MsG0780041454.01.T02:intron 45.0%
CCTCTAACCAAGAGATCACT+TGG + Chr7:91102432-91102451 MsG0780041454.01.T02:intron 45.0%
CTTCTCTTTCCTTAAACCGG+TGG - Chr7:91105462-91105481 None:intergenic 45.0%
GAAGACGCGTGGATTTCATT+CGG + Chr7:91102674-91102693 MsG0780041454.01.T02:intron 45.0%
GAGAGACTAAAATCAGGCGT+GGG + Chr7:91101798-91101817 MsG0780041454.01.T02:intron 45.0%
GATCACTTGGAAGTTGGAAG+TGG + Chr7:91102445-91102464 MsG0780041454.01.T02:intron 45.0%
GATCATGAGTCATCGTTGTG+AGG + Chr7:91102997-91103016 MsG0780041454.01.T02:intron 45.0%
GATCTATGTTGGGTACACGT+GGG - Chr7:91106690-91106709 None:intergenic 45.0%
GATGGTTATGTCTCATCCAC+TGG - Chr7:91105337-91105356 None:intergenic 45.0%
GGAGGAGTGGTTCCATTTAT+AGG - Chr7:91108901-91108920 None:intergenic 45.0%
GGCAACAATGATATCGACGA+AGG - Chr7:91100947-91100966 None:intergenic 45.0%
GGCCACATAGAATTGCAAAC+GGG - Chr7:91103510-91103529 None:intergenic 45.0%
GGGCCACATAGAATTGCAAA+CGG - Chr7:91103511-91103530 None:intergenic 45.0%
GTAAACGTATAGAAGCCACG+TGG + Chr7:91108818-91108837 MsG0780041454.01.T02:intron 45.0%
GTCACAAGGAGGAAAGGAAA+AGG - Chr7:91101057-91101076 None:intergenic 45.0%
GTGACATTCGCTTGATCAGT+CGG - Chr7:91107885-91107904 None:intergenic 45.0%
GTGGTTCCATTTATAGGACG+TGG - Chr7:91108895-91108914 None:intergenic 45.0%
TCAGACGGGATTAATTCGGA+TGG + Chr7:91107474-91107493 MsG0780041454.01.T02:intron 45.0%
TCCAGGAAGATAGCCCAAAA+TGG - Chr7:91109235-91109254 None:intergenic 45.0%
TGATCTATGTTGGGTACACG+TGG - Chr7:91106691-91106710 None:intergenic 45.0%
TGGATCGTACGTAGACCATA+TGG + Chr7:91107918-91107937 MsG0780041454.01.T02:intron 45.0%
TGTGTGGGATGGTACAGTTA+CGG + Chr7:91107548-91107567 MsG0780041454.01.T02:intron 45.0%
TTATTTGGGTACGGTTGAGC+AGG - Chr7:91102502-91102521 None:intergenic 45.0%
TTTGATGCTTGAAGAGGACG+AGG + Chr7:91104235-91104254 MsG0780041454.01.T02:intron 45.0%
! ACCATTTTGGGCTATCTTCC+TGG + Chr7:91109231-91109250 MsG0780041454.01.T02:CDS 45.0%
! GGTAAACTGACCGACTCATT+TGG - Chr7:91108724-91108743 None:intergenic 45.0%
! GTTGTCATCCTTTTGCATCG+TGG + Chr7:91105095-91105114 MsG0780041454.01.T02:intron 45.0%
!! CAAACTGGCTCGGATAAAAC+GGG + Chr7:91106553-91106572 MsG0780041454.01.T02:intron 45.0%
!! CCAAACTGGCTCGGATAAAA+CGG + Chr7:91106552-91106571 MsG0780041454.01.T02:intron 45.0%
!! CCTCAATGCCTTCTAAAGTG+AGG + Chr7:91103343-91103362 MsG0780041454.01.T02:intron 45.0%
!! CCTCACTTTAGAAGGCATTG+AGG - Chr7:91103346-91103365 None:intergenic 45.0%
!! CTTGGTGTCTTCCTCAAGTT+TGG + Chr7:91109082-91109101 MsG0780041454.01.T02:intron 45.0%
!! TGCCTGATCTTTAAGGTCCT+TGG - Chr7:91102408-91102427 None:intergenic 45.0%
!! TTCTGAGGTGTTTGCTCTTG+TGG + Chr7:91104882-91104901 MsG0780041454.01.T02:intron 45.0%
!!! ACCCTTTTTGGCTATCTTCC+TGG + Chr7:91101159-91101178 MsG0780041454.01.T01:CDS 45.0%
!!! ATCACTTTTTTGGGACCACG+TGG - Chr7:91108836-91108855 None:intergenic 45.0%
!!! TGTTTGGTGCTCACCCTTTT+TGG + Chr7:91101147-91101166 MsG0780041454.01.T01:CDS 45.0%
!! AAAATAAAACAAAATATATT+TGG + Chr7:91108668-91108687 MsG0780041454.01.T02:intron 5.0%
!! AAATTAAATAAATAAAAACA+CGG - Chr7:91105495-91105514 None:intergenic 5.0%
!! AATTCTTATATAAATTAATT+AGG - Chr7:91108772-91108791 None:intergenic 5.0%
!! ATATGATAAAAATAAATTAA+AGG + Chr7:91108233-91108252 MsG0780041454.01.T02:intron 5.0%
!! TAATTAATTTATATAAGAAT+TGG + Chr7:91108771-91108790 MsG0780041454.01.T02:intron 5.0%
!! TAGATAATTAAATATATTAA+CGG + Chr7:91104742-91104761 MsG0780041454.01.T02:intron 5.0%
!! TATTGAATAAAAATAAATTA+AGG + Chr7:91108169-91108188 MsG0780041454.01.T02:intron 5.0%
!! TTAAAAAAATATAATTCAAT+TGG - Chr7:91102479-91102498 None:intergenic 5.0%
!!! AAATTCATAATTTTAAATAA+GGG + Chr7:91102524-91102543 MsG0780041454.01.T02:intron 5.0%
!!! ATAAAAATAGTTTTAAAATA+AGG - Chr7:91107320-91107339 None:intergenic 5.0%
!!! ATATTTTGTTTTATTTTTAT+TGG - Chr7:91108665-91108684 None:intergenic 5.0%
!!! TAAAAATAGTTTTAAAATAA+GGG - Chr7:91107319-91107338 None:intergenic 5.0%
!!! TATTTTAAAACTATTTTTAT+TGG + Chr7:91107320-91107339 MsG0780041454.01.T02:intron 5.0%
!!! TTTTTATCTTTTATTTTAAA+GGG - Chr7:91107147-91107166 None:intergenic 5.0%
!!! TTTTTTATCTTTTATTTTAA+AGG - Chr7:91107148-91107167 None:intergenic 5.0%
ACATAGGGCAGGAATCGAGA+CGG + Chr7:91107577-91107596 MsG0780041454.01.T02:intron 50.0%
ACCAAGAGGTGGAAGGATGA+TGG - Chr7:91109068-91109087 None:intergenic 50.0%
ACCCATTTCCTAACGTGGCA+GGG - Chr7:91107763-91107782 None:intergenic 50.0%
ACGTGTTGGAAGAATGGGTC+AGG + Chr7:91106021-91106040 MsG0780041454.01.T02:intron 50.0%
ATCGGCAAACCGTAACGTGT+TGG + Chr7:91106007-91106026 MsG0780041454.01.T02:intron 50.0%
ATGAGTCATCGTTGTGAGGG+AGG + Chr7:91103001-91103020 MsG0780041454.01.T02:intron 50.0%
ATGGGTCAGATATTCCGGGA+CGG - Chr7:91106090-91106109 None:intergenic 50.0%
ATTACCCCACAGTCACAAGG+AGG - Chr7:91101068-91101087 None:intergenic 50.0%
ATTTCCTAACGTGGCAGGGA+CGG - Chr7:91107759-91107778 None:intergenic 50.0%
CCATCCCACACAACACCATT+TGG - Chr7:91107540-91107559 None:intergenic 50.0%
CCTTTCCTCCTTGTGACTGT+GGG + Chr7:91101060-91101079 MsG0780041454.01.T01:intron 50.0%
CTCAACTGCTAGGAAGAGCA+AGG + Chr7:91103562-91103581 MsG0780041454.01.T02:intron 50.0%
CTTACCCTGGCTACCAAACA+AGG - Chr7:91108195-91108214 None:intergenic 50.0%
CTTTCCTCCTTGTGACTGTG+GGG + Chr7:91101061-91101080 MsG0780041454.01.T01:intron 50.0%
GAAAGGGAAAGTTCACGAGC+TGG - Chr7:91107798-91107817 None:intergenic 50.0%
GATGGACCCATTTCCTAACG+TGG - Chr7:91107768-91107787 None:intergenic 50.0%
GCGCAAAGATGTAAAGGTGG+TGG + Chr7:91104157-91104176 MsG0780041454.01.T02:intron 50.0%
GGAGAGACTAAAATCAGGCG+TGG + Chr7:91101797-91101816 MsG0780041454.01.T02:intron 50.0%
GTGTGGGATGGTACAGTTAC+GGG + Chr7:91107549-91107568 MsG0780041454.01.T02:intron 50.0%
TCCCTGCCACGTTAGGAAAT+GGG + Chr7:91107759-91107778 MsG0780041454.01.T02:intron 50.0%
TCCTTTCCTCCTTGTGACTG+TGG + Chr7:91101059-91101078 MsG0780041454.01.T01:intron 50.0%
TCGCTTGATCAGTCGGCAAT+GGG - Chr7:91107878-91107897 None:intergenic 50.0%
TGAGTCATCGTTGTGAGGGA+GGG + Chr7:91103002-91103021 MsG0780041454.01.T02:intron 50.0%
TGATAAAGACGAGGGAGGAG+TGG - Chr7:91108914-91108933 None:intergenic 50.0%
TTCGCTTGATCAGTCGGCAA+TGG - Chr7:91107879-91107898 None:intergenic 50.0%
TTGAGGAAGACACCAAGAGG+TGG - Chr7:91100979-91100998 None:intergenic 50.0%
! CCGTTTTATCCGAGCCAGTT+TGG - Chr7:91106555-91106574 None:intergenic 50.0%
! TTTGGTAGCCAGGGTAAGAG+AGG + Chr7:91108197-91108216 MsG0780041454.01.T02:intron 50.0%
!! AAGGCCTTGTTTGGTAGCCA+GGG + Chr7:91108188-91108207 MsG0780041454.01.T02:intron 50.0%
!! CCAAATGGTGTTGTGTGGGA+TGG + Chr7:91107537-91107556 MsG0780041454.01.T02:intron 50.0%
!! CGTTTCTGGAAGTGTTCCAC+CGG + Chr7:91105443-91105462 MsG0780041454.01.T02:intron 50.0%
!! GGAAGTGTTCCACCGGTTTA+AGG + Chr7:91105450-91105469 MsG0780041454.01.T02:intron 50.0%
!! GGTGGAGTTCTGGATCTGTT+TGG + Chr7:91101131-91101150 MsG0780041454.01.T01:intron 50.0%
!! TAAGGCCTTGTTTGGTAGCC+AGG + Chr7:91108187-91108206 MsG0780041454.01.T02:intron 50.0%
!! TTGGTTGGTAGGTGGAGTTC+TGG + Chr7:91101121-91101140 MsG0780041454.01.T01:intron 50.0%
ACCAAGAGGTGGTAGGAGGA+TGG - Chr7:91100968-91100987 None:intergenic 55.0%
AGACACCAAGAGGTGGTAGG+AGG - Chr7:91100972-91100991 None:intergenic 55.0%
AGTCATCGTTGTGAGGGAGG+GGG + Chr7:91103004-91103023 MsG0780041454.01.T02:intron 55.0%
CATAGGGCAGGAATCGAGAC+GGG + Chr7:91107578-91107597 MsG0780041454.01.T02:intron 55.0%
CCCACAGTCACAAGGAGGAA+AGG - Chr7:91101063-91101082 None:intergenic 55.0%
CTCGGATAAAACGGGACGGA+GGG + Chr7:91106561-91106580 MsG0780041454.01.T02:intron 55.0%
CTTTCTTACTCCCTCCGTCC+CGG + Chr7:91106073-91106092 MsG0780041454.01.T02:intron 55.0%
GACCCATTTCCTAACGTGGC+AGG - Chr7:91107764-91107783 None:intergenic 55.0%
GAGTCATCGTTGTGAGGGAG+GGG + Chr7:91103003-91103022 MsG0780041454.01.T02:intron 55.0%
GCCATCATCCTTCCACCTCT+TGG + Chr7:91109064-91109083 MsG0780041454.01.T02:intron 55.0%
GGAAGACACCAAGAGGTGGA+AGG - Chr7:91109075-91109094 None:intergenic 55.0%
GGAAGACACCAAGAGGTGGT+AGG - Chr7:91100975-91100994 None:intergenic 55.0%
GGACGGAGGGAGTAAGAAAG+AGG - Chr7:91106073-91106092 None:intergenic 55.0%
GTCAGATATTCCGGGACGGA+GGG - Chr7:91106086-91106105 None:intergenic 55.0%
GTCCCTGCCACGTTAGGAAA+TGG + Chr7:91107758-91107777 MsG0780041454.01.T02:intron 55.0%
TACGGGAAGCAACATAGGGC+AGG + Chr7:91107566-91107585 MsG0780041454.01.T02:intron 55.0%
TATGTTGGGTACACGTGGGG+AGG - Chr7:91106686-91106705 None:intergenic 55.0%
TCACGAGCTGGTACACGTGA+TGG - Chr7:91107786-91107805 None:intergenic 55.0%
TGGTGGTCTGCGTCGTCTAT+CGG + Chr7:91105989-91106008 MsG0780041454.01.T02:intron 55.0%
!! CTGGCTCGGATAAAACGGGA+CGG + Chr7:91106557-91106576 MsG0780041454.01.T02:intron 55.0%
!! GCATTGTATGGTGCTGCCAG+TGG + Chr7:91105318-91105337 MsG0780041454.01.T02:intron 55.0%
CTAACCGTCCCTGCCACGTT+AGG + Chr7:91107752-91107771 MsG0780041454.01.T02:intron 60.0%
GCCATCCTCCTACCACCTCT+TGG + Chr7:91100964-91100983 MsG0780041454.01.T01:CDS 60.0%
GCTCGGATAAAACGGGACGG+AGG + Chr7:91106560-91106579 MsG0780041454.01.T02:intron 60.0%
GGTCAGATATTCCGGGACGG+AGG - Chr7:91106087-91106106 None:intergenic 60.0%
TTGGGTACACGTGGGGAGGT+GGG - Chr7:91106682-91106701 None:intergenic 60.0%
GTTGGGTACACGTGGGGAGG+TGG - Chr7:91106683-91106702 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 91100784 91109287 91100784 ID=MsG0780041454.01;Name=MsG0780041454.01
Chr7 mRNA 91100784 91101242 91100784 ID=MsG0780041454.01.T01;Parent=MsG0780041454.01;Name=MsG0780041454.01.T01;_AED=0.46;_eAED=0.51;_QI=147|1|0.5|1|0|0|2|0|63
Chr7 exon 91101132 91101242 91101132 ID=MsG0780041454.01.T01:exon:3954;Parent=MsG0780041454.01.T01
Chr7 five_prime_UTR 91100784 91100930 91100784 ID=MsG0780041454.01.T01:five_prime_utr;Parent=MsG0780041454.01.T01
Chr7 CDS 91100931 91101011 91100931 ID=MsG0780041454.01.T01:cds;Parent=MsG0780041454.01.T01
Chr7 CDS 91101132 91101242 91101132 ID=MsG0780041454.01.T01:cds;Parent=MsG0780041454.01.T01
Chr7 mRNA 91100784 91109287 91100784 ID=MsG0780041454.01.T02;Parent=MsG0780041454.01;Name=MsG0780041454.01.T02;_AED=0.46;_eAED=0.47;_QI=147|0|0.5|1|0|0|2|0|54
Chr7 exon 91109204 91109287 91109204 ID=MsG0780041454.01.T02:exon:3955;Parent=MsG0780041454.01.T02
Chr7 five_prime_UTR 91100784 91100930 91100784 ID=MsG0780041454.01.T02:five_prime_utr;Parent=MsG0780041454.01.T02
Chr7 CDS 91100931 91101011 91100931 ID=MsG0780041454.01.T02:cds;Parent=MsG0780041454.01.T02
Chr7 CDS 91109204 91109287 91109204 ID=MsG0780041454.01.T02:cds;Parent=MsG0780041454.01.T02
Chr7 mRNA 91109045 91109283 91109045 ID=MsG0780041454.01.T03;Parent=MsG0780041454.01;Name=MsG0780041454.01.T03;_AED=0.48;_eAED=1.00;_QI=0|0|0|1|0|0|2|0|48
Chr7 exon 91109045 91109111 91109045 ID=MsG0780041454.01.T03:exon:3956;Parent=MsG0780041454.01.T03
Chr7 exon 91109204 91109283 91109204 ID=MsG0780041454.01.T03:exon:3957;Parent=MsG0780041454.01.T03
Chr7 CDS 91109045 91109111 91109045 ID=MsG0780041454.01.T03:cds;Parent=MsG0780041454.01.T03
Chr7 CDS 91109204 91109283 91109204 ID=MsG0780041454.01.T03:cds;Parent=MsG0780041454.01.T03
Chr7 mRNA 91109031 91109183 91109031 ID=MsG0780041454.01.T04;Parent=MsG0780041454.01;Name=MsG0780041454.01.T04;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|0|1|0|50
Chr7 exon 91109031 91109183 91109031 ID=MsG0780041454.01.T04:exon:3958;Parent=MsG0780041454.01.T04
Chr7 CDS 91109031 91109183 91109031 ID=MsG0780041454.01.T04:cds;Parent=MsG0780041454.01.T04
Gene Sequence

>MsG0780041454.01.T04

ATGGGCACTGCTACATGCGTCGATATTATTCTTGCCATCATCCTTCCACCTCTTGGTGTCTTCCTCAAGTTTGGTTGCAACGTAATAATCTATAAAACCTTCTTTCTTCTTTCTTGCTTTTCTTGTATATATGTTTTTTATGCTAATTATTAA

>MsG0780041454.01.T01

ATGGGCACAGCTACCTTCGTCGATATCATTGTTGCCATCCTCCTACCACCTCTTGGTGTCTTCCTCAAATTTGGTTTGGAAGTGGAGTTCTGGATCTGTTTGGTGCTCACCCTTTTTGGCTATCTTCCTGGAATTATCTATGCTATCTATATTATCACTAATGGTGTGTTTGGTTCGGAAGAGAAATTGTAA

>MsG0780041454.01.T02

ATGGGCACAGCTACCTTCGTCGATATCATTGTTGCCATCCTCCTACCACCTCTTGGTGTCTTCCTCAAATTTGGTTTGGAAGTCGAGTTTTGGATATGTTTGATTCTCACCATTTTGGGCTATCTTCCTGGAATTCTCTATGCTATCTATGTTATCACTAAGTGA

>MsG0780041454.01.T03

ATGCGTCGATATTATTCTTGCCATCATCCTTCCACCTCTTGGTGTCTTCCTCAAGTTTGGTTGCAACGTCGAGTTTTGGATATGTTTGATTCTCACCATTTTGGGCTATCTTCCTGGAATTCTCTATGCTATCTATGTTATCACTAA
Protein sequence

>MsG0780041454.01.T04

MGTATCVDIILAIILPPLGVFLKFGCNVIIYKTFFLLSCFSCIYVFYANY*

>MsG0780041454.01.T01

MGTATFVDIIVAILLPPLGVFLKFGLEVEFWICLVLTLFGYLPGIIYAIYIITNGVFGSEEKL*

>MsG0780041454.01.T02

MGTATFVDIIVAILLPPLGVFLKFGLEVEFWICLILTILGYLPGILYAIYVITK*

>MsG0780041454.01.T03

MRRYYSCHHPSTSWCLPQVWLQRRVLDMFDSHHFGLSSWNSLCYLCYH*