AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880041979.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041979.01.T01 MTR_8g008505 87.701 187 22 1 1 186 1 187 7.62e-119 338
MsG0880041979.01.T01 MTR_8g008500 86.772 189 21 2 1 185 1 189 4.11e-117 334
MsG0880041979.01.T01 MTR_8g008660 79.032 186 37 1 1 186 1 184 4.00e-103 298
MsG0880041979.01.T01 MTR_3g464040 80.114 176 33 1 10 185 2 175 1.05e-96 282
MsG0880041979.01.T01 MTR_8g007675 67.702 161 51 1 27 186 32 192 8.01e-76 229
MsG0880041979.01.T01 MTR_8g007670 54.819 166 66 2 26 186 6 167 4.84e-62 194
MsG0880041979.01.T01 MTR_5g018320 54.819 166 73 2 23 186 1 166 1.14e-61 192
MsG0880041979.01.T01 MTR_5g018300 52.147 163 76 2 26 186 7 169 8.14e-58 183
MsG0880041979.01.T01 MTR_5g018280 50.909 165 74 4 26 186 7 168 1.38e-54 174
MsG0880041979.01.T01 MTR_8g007670 61.864 118 45 0 26 143 6 123 5.86e-53 169
MsG0880041979.01.T01 MTR_8g079120 43.293 164 84 3 26 185 52 210 2.00e-40 137
MsG0880041979.01.T01 MTR_8g079120 43.293 164 84 3 26 185 10 168 5.24e-40 137
MsG0880041979.01.T01 MTR_5g018350 42.683 164 87 2 27 187 7 166 1.82e-39 135
MsG0880041979.01.T01 MTR_5g018365 44.099 161 87 2 26 185 11 169 2.70e-39 135
MsG0880041979.01.T01 MTR_7g015220 43.478 161 89 1 27 185 124 284 8.39e-39 137
MsG0880041979.01.T01 MTR_5g068100 39.759 166 90 3 26 185 29 190 1.87e-33 120
MsG0880041979.01.T01 MTR_3g093730 36.527 167 104 1 21 185 30 196 7.44e-33 119
MsG0880041979.01.T01 MTR_3g005410 34.706 170 108 1 19 185 86 255 3.84e-32 119
MsG0880041979.01.T01 MTR_3g093730 43.636 110 62 0 21 130 30 139 1.01e-29 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880041979.01.T01 AT3G50440 46.452 155 80 1 28 179 22 176 5.58e-43 145
MsG0880041979.01.T01 AT2G23600 44.512 164 86 3 26 185 23 185 6.87e-42 140
MsG0880041979.01.T01 AT2G23610 44.444 162 85 3 26 183 8 168 1.41e-41 141
MsG0880041979.01.T01 AT2G23600 44.242 165 87 3 26 186 8 171 6.88e-41 139
MsG0880041979.01.T01 AT2G23600 44.242 165 87 3 26 186 23 186 1.19e-40 139
MsG0880041979.01.T01 AT2G23620 43.713 167 83 3 26 185 8 170 4.10e-40 137
MsG0880041979.01.T01 AT2G23590 44.720 161 83 4 26 186 26 180 8.58e-40 137
MsG0880041979.01.T01 AT1G26360 45.181 166 85 3 22 183 184 347 2.68e-39 139
MsG0880041979.01.T01 AT1G33990 40.491 163 94 1 26 185 96 258 2.13e-38 135
MsG0880041979.01.T01 AT2G23580 43.275 171 85 5 24 186 5 171 8.49e-38 130
MsG0880041979.01.T01 AT1G69240 40.606 165 95 1 22 183 182 346 8.68e-38 135
MsG0880041979.01.T01 AT3G29770 46.061 165 79 4 27 185 138 298 9.28e-38 134
MsG0880041979.01.T01 AT5G58310 40.116 172 88 3 27 187 5 172 3.46e-37 130
MsG0880041979.01.T01 AT2G23560 40.606 165 97 1 24 187 5 169 6.73e-37 129
MsG0880041979.01.T01 AT2G23610 55.238 105 46 1 26 129 8 112 6.84e-37 128
MsG0880041979.01.T01 AT2G23580 43.452 168 83 5 24 183 5 168 1.22e-36 129
MsG0880041979.01.T01 AT4G37150 40.113 177 78 4 26 187 2 165 5.37e-35 124
MsG0880041979.01.T01 AT4G09900 38.037 163 98 2 26 185 97 259 8.15e-35 126
MsG0880041979.01.T01 AT4G37140 49.074 108 55 0 26 133 2 109 1.30e-34 119
MsG0880041979.01.T01 AT3G10870 37.267 161 99 1 27 185 20 180 2.60e-34 123
MsG0880041979.01.T01 AT5G10300 40.741 162 95 1 27 187 6 167 6.07e-33 119
MsG0880041979.01.T01 AT4G16690 38.365 159 97 1 27 185 12 169 1.12e-32 118
MsG0880041979.01.T01 AT2G23550 40.476 168 88 4 24 183 12 175 1.21e-32 117
MsG0880041979.01.T01 AT5G10300 40.491 163 96 1 27 188 6 168 1.84e-32 116
MsG0880041979.01.T01 AT2G23550 40.476 168 88 4 24 183 12 175 6.02e-32 117
MsG0880041979.01.T01 AT2G23550 40.476 168 88 4 24 183 5 168 6.38e-32 116
MsG0880041979.01.T01 AT4G37140 48.352 91 47 0 26 116 2 92 5.72e-29 104
MsG0880041979.01.T01 AT3G29770 52.055 73 35 0 27 99 138 210 2.07e-20 86.7
MsG0880041979.01.T01 AT2G23550 34.132 167 71 4 24 183 5 139 9.10e-19 81.3

Find 42 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAACCTTTGATATCATTTA+TGG 0.078023 8:-2067517 MsG0880041979.01.T01:CDS
CCACAGTTATTGTTCTTAAA+TGG 0.151463 8:-2066383 MsG0880041979.01.T01:CDS
GAATTACAGTTGTGAAATTA+AGG 0.203942 8:+2067358 None:intergenic
CCTCCAACTGCCTTGTTGTT+TGG 0.223716 8:-2066350 MsG0880041979.01.T01:CDS
ATTCTTGTGGGTCATAGTTT+TGG 0.257233 8:-2067468 MsG0880041979.01.T01:CDS
TCAACGCAACGTGTCTTTCC+CGG 0.355661 8:+2067748 None:intergenic
CAGATGAGATGCCAAGAGTT+TGG 0.357433 8:+2066325 None:intergenic
ACAAGAATCACCTTCTCCTT+TGG 0.362247 8:+2067483 None:intergenic
ATATCATCAAGATGTTTAAC+CGG 0.368404 8:-2067767 None:intergenic
AAACACTTCGTGCTTGTTCA+TGG 0.375301 8:-2067681 MsG0880041979.01.T01:CDS
AATTACAGTTGTGAAATTAA+GGG 0.385824 8:+2067359 None:intergenic
TTAAAGGGTTATTTCAAAGT+TGG 0.386433 8:-2066125 MsG0880041979.01.T01:intron
AAGGCAGTTGGAGGACTGTT+TGG 0.392141 8:+2066359 None:intergenic
TGGTGCATGGTGTTGGTATA+AGG 0.400591 8:-2067649 MsG0880041979.01.T01:CDS
GTTGTTTGGATCCAAACTCT+TGG 0.434228 8:-2066336 MsG0880041979.01.T01:CDS
TTCGTGCTTGTTCATGGAGC+TGG 0.443341 8:-2067675 MsG0880041979.01.T01:CDS
TGAATCTCTTGAACCTGGAT+TGG 0.451774 8:+2067558 None:intergenic
GTTACAACTATTGACTTGGC+TGG 0.453693 8:-2067594 MsG0880041979.01.T01:CDS
AGAATCACCTTCTCCTTTGG+AGG 0.473413 8:+2067486 None:intergenic
GATTAACTCAACAAATCTAA+AGG 0.483730 8:+2066095 None:intergenic
TTGAATGAATCTCTTGAACC+TGG 0.486844 8:+2067553 None:intergenic
GATACCCTTATCTGTTGCTA+TGG 0.489986 8:-2067442 MsG0880041979.01.T01:CDS
ACTATTGACTTGGCTGGTTG+TGG 0.490659 8:-2067588 MsG0880041979.01.T01:CDS
AAGGAGAAGGTGATTCTTGT+GGG 0.501737 8:-2067480 MsG0880041979.01.T01:CDS
TTGTGGTATCAGTCCAATCC+AGG 0.508233 8:-2067571 MsG0880041979.01.T01:CDS
ATGGAGCTGGCCATGGTGCA+TGG 0.509766 8:-2067662 MsG0880041979.01.T01:CDS
TAATGTTACAACTATTGACT+TGG 0.521866 8:-2067598 MsG0880041979.01.T01:CDS
GATCCAAACAACAAGGCAGT+TGG 0.527636 8:+2066347 None:intergenic
CTGGCCATGGTGCATGGTGT+TGG 0.530072 8:-2067656 MsG0880041979.01.T01:CDS
AAAGGAGAAGGTGATTCTTG+TGG 0.544745 8:-2067481 MsG0880041979.01.T01:CDS
TTTCACAACTGTAATTCAAG+AGG 0.547572 8:-2067352 MsG0880041979.01.T01:intron
GTATCAATTATCGCCTAATG+AGG 0.552044 8:-2066303 MsG0880041979.01.T01:intron
CTTGTTCATGGAGCTGGCCA+TGG 0.553638 8:-2067669 MsG0880041979.01.T01:CDS
TTTAAGAACAATAACTGTGG+TGG 0.553701 8:+2066386 None:intergenic
ATCTCTTCCTCCAAAGGAGA+AGG 0.557078 8:-2067493 MsG0880041979.01.T01:CDS
TATGGAATCTCTTCCTCCAA+AGG 0.561902 8:-2067499 MsG0880041979.01.T01:CDS
CCAAACAACAAGGCAGTTGG+AGG 0.578597 8:+2066350 None:intergenic
TATCATCAAGATGTTTAACC+GGG 0.579472 8:-2067766 None:intergenic
GATTCCATAAATGATATCAA+AGG 0.612866 8:+2067513 None:intergenic
TATACCAACACCATGCACCA+TGG 0.666354 8:+2067652 None:intergenic
GAGTTTGGATCCAAACAACA+AGG 0.680669 8:+2066340 None:intergenic
CCATTTAAGAACAATAACTG+TGG 0.713087 8:+2066383 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATATTAATAAAAATT+AGG - Chr8:2066727-2066746 MsG0880041979.01.T01:intron 0.0%
!! AAGGAAAAAAAAAATTATAA+AGG + Chr8:2066801-2066820 None:intergenic 10.0%
!! AATATAAATATATATAACCA+TGG + Chr8:2066717-2066736 None:intergenic 10.0%
!! AATGCAAAATTAAAATTATT+AGG - Chr8:2066912-2066931 MsG0880041979.01.T01:intron 10.0%
!! ACATTTATATATTATTAGAA+GGG - Chr8:2066546-2066565 MsG0880041979.01.T01:intron 10.0%
!! ATGCAAAATTAAAATTATTA+GGG - Chr8:2066913-2066932 MsG0880041979.01.T01:intron 10.0%
!! TTCTAATAATATATAAATGT+GGG + Chr8:2066546-2066565 None:intergenic 10.0%
!!! TATTGTTGTTAATTTTTAAA+GGG - Chr8:2067713-2067732 MsG0880041979.01.T01:CDS 10.0%
!!! TTATTGTTGTTAATTTTTAA+AGG - Chr8:2067712-2067731 MsG0880041979.01.T01:CDS 10.0%
!! CACATTTATATATTATTAGA+AGG - Chr8:2066545-2066564 MsG0880041979.01.T01:intron 15.0%
!! CATTTATATATTATTAGAAG+GGG - Chr8:2066547-2066566 MsG0880041979.01.T01:intron 15.0%
!! CTTCTAATAATATATAAATG+TGG + Chr8:2066547-2066566 None:intergenic 15.0%
!!! AAAATCCATTAAAGTATTTT+AGG + Chr8:2067328-2067347 None:intergenic 15.0%
!!! TATTATCTAATACCTTTTAT+TGG - Chr8:2066882-2066901 MsG0880041979.01.T01:intron 15.0%
!!! TGATTGAAAATTTGAAATAA+AGG - Chr8:2067589-2067608 MsG0880041979.01.T01:CDS 15.0%
!!! TTTATTCTTTCATTTTTCAT+TGG - Chr8:2066139-2066158 MsG0880041979.01.T01:intron 15.0%
!! AATTACAGTTGTGAAATTAA+GGG + Chr8:2066497-2066516 None:intergenic 20.0%
!! ACTAAAAAAAGTCTACATTT+AGG + Chr8:2067060-2067079 None:intergenic 20.0%
!! AGAAACCTAAAATACTTTAA+TGG - Chr8:2067320-2067339 MsG0880041979.01.T01:intron 20.0%
!! CTAAAAAAAGTCTACATTTA+GGG + Chr8:2067059-2067078 None:intergenic 20.0%
!! TCTATTATTCAAGAAAAAGA+GGG + Chr8:2066621-2066640 None:intergenic 20.0%
!! TTCTATTATTCAAGAAAAAG+AGG + Chr8:2066622-2066641 None:intergenic 20.0%
!!! AAATATGTGATGGATTAATA+AGG - Chr8:2066592-2066611 MsG0880041979.01.T01:intron 20.0%
!!! CTGAGTTTATTCTTTTTTAA+GGG + Chr8:2067290-2067309 None:intergenic 20.0%
!!! CTGAGTTTTAATTTTAATTG+TGG - Chr8:2067361-2067380 MsG0880041979.01.T01:CDS 20.0%
!!! GCATTTTAATTTCCAATAAA+AGG + Chr8:2066897-2066916 None:intergenic 20.0%
!!! TCTGAGTTTATTCTTTTTTA+AGG + Chr8:2067291-2067310 None:intergenic 20.0%
! AATAGAATAAAGTCTTGATC+TGG - Chr8:2066635-2066654 MsG0880041979.01.T01:intron 25.0%
! ATTCATCAACTCAGAATTTA+GGG - Chr8:2066956-2066975 MsG0880041979.01.T01:intron 25.0%
! GAATTACAGTTGTGAAATTA+AGG + Chr8:2066498-2066517 None:intergenic 25.0%
! GATTCCATAAATGATATCAA+AGG + Chr8:2066343-2066362 None:intergenic 25.0%
! GCAAAAAAATTTACCTCATT+AGG + Chr8:2067566-2067585 None:intergenic 25.0%
! TATTCATCAACTCAGAATTT+AGG - Chr8:2066955-2066974 MsG0880041979.01.T01:intron 25.0%
! TGAACCTTTGATATCATTTA+TGG - Chr8:2066336-2066355 MsG0880041979.01.T01:CDS 25.0%
! TTAAGACTCAAAATATGTGA+TGG - Chr8:2066582-2066601 MsG0880041979.01.T01:intron 25.0%
!! GTCATTTGAGTTTAAATTCT+GGG + Chr8:2067268-2067287 None:intergenic 25.0%
!! TAATGTTACAACTATTGACT+TGG - Chr8:2066255-2066274 MsG0880041979.01.T01:intron 25.0%
!! TCATTTGAGTTTAAATTCTG+GGG + Chr8:2067267-2067286 None:intergenic 25.0%
!! TTAAAGGGTTATTTCAAAGT+TGG - Chr8:2067728-2067747 MsG0880041979.01.T01:CDS 25.0%
!!! ATATTATTAGAAGGGGTATT+CGG - Chr8:2066554-2066573 MsG0880041979.01.T01:intron 25.0%
!!! CATTTTTCATTGGTGTTAAT+GGG - Chr8:2066149-2066168 MsG0880041979.01.T01:intron 25.0%
!!! TCATTTTTCATTGGTGTTAA+TGG - Chr8:2066148-2066167 MsG0880041979.01.T01:intron 25.0%
AAATTTCCATTGCAGATGTT+AGG - Chr8:2066689-2066708 MsG0880041979.01.T01:intron 30.0%
ACTAAAAGAGTCTACATTCA+AGG + Chr8:2067092-2067111 None:intergenic 30.0%
CCACAGTTATTGTTCTTAAA+TGG - Chr8:2067470-2067489 MsG0880041979.01.T01:CDS 30.0%
CCATTTAAGAACAATAACTG+TGG + Chr8:2067473-2067492 None:intergenic 30.0%
TCAAGGACTAAATTGACTAA+CGG + Chr8:2067139-2067158 None:intergenic 30.0%
TTCATCAACTCAGAATTTAG+GGG - Chr8:2066957-2066976 MsG0880041979.01.T01:intron 30.0%
TTTAAGAACAATAACTGTGG+TGG + Chr8:2067470-2067489 None:intergenic 30.0%
TTTCACAACTGTAATTCAAG+AGG - Chr8:2066501-2066520 MsG0880041979.01.T01:intron 30.0%
TTTGCAATTTATCTGCATTC+CGG + Chr8:2067031-2067050 None:intergenic 30.0%
! ACTGCAACAGAAATTTTCTT+AGG + Chr8:2066445-2066464 None:intergenic 30.0%
! CATTTGAGTTTAAATTCTGG+GGG + Chr8:2067266-2067285 None:intergenic 30.0%
! CTGCAACAGAAATTTTCTTA+GGG + Chr8:2066444-2066463 None:intergenic 30.0%
! GGTCATTTGAGTTTAAATTC+TGG + Chr8:2067269-2067288 None:intergenic 30.0%
! TTTTAGTCCCTAAATAGGAA+AGG + Chr8:2067234-2067253 None:intergenic 30.0%
! TTTTCCATAGCAACAGATAA+GGG + Chr8:2066418-2066437 None:intergenic 30.0%
!! AGTCATTTTAGTCCCTAAAT+AGG + Chr8:2067239-2067258 None:intergenic 30.0%
!!! AGTATTTTAGGTTTCTTCAG+AGG + Chr8:2067316-2067335 None:intergenic 30.0%
AACAGAATACACACACAGTA+AGG + Chr8:2066820-2066839 None:intergenic 35.0%
ACCAACAAAGTCTACATTCA+GGG - Chr8:2067164-2067183 MsG0880041979.01.T01:intron 35.0%
AGAATAAAGTCTTGATCTGG+TGG - Chr8:2066638-2066657 MsG0880041979.01.T01:intron 35.0%
AGTTCTTCTCTCATTCTATG+AGG + Chr8:2067438-2067457 None:intergenic 35.0%
GACTACTCCTTTCCTATTTA+GGG - Chr8:2067224-2067243 MsG0880041979.01.T01:intron 35.0%
GACTTTGTTGGTCAATTTCA+AGG + Chr8:2067156-2067175 None:intergenic 35.0%
GTATCAATTATCGCCTAATG+AGG - Chr8:2067550-2067569 MsG0880041979.01.T01:CDS 35.0%
TGACTACTCCTTTCCTATTT+AGG - Chr8:2067223-2067242 MsG0880041979.01.T01:intron 35.0%
TTGAATGAATCTCTTGAACC+TGG + Chr8:2066303-2066322 None:intergenic 35.0%
TTGCAATTTATCTGCATTCC+GGG + Chr8:2067030-2067049 None:intergenic 35.0%
TTGCAATTTCTCTGCATTCA+GGG - Chr8:2067193-2067212 MsG0880041979.01.T01:intron 35.0%
TTTGCAATTTCTCTGCATTC+AGG - Chr8:2067192-2067211 MsG0880041979.01.T01:intron 35.0%
! ATTCTTGTGGGTCATAGTTT+TGG - Chr8:2066385-2066404 MsG0880041979.01.T01:CDS 35.0%
! CTTTTCCATAGCAACAGATA+AGG + Chr8:2066419-2066438 None:intergenic 35.0%
AAACACTTCGTGCTTGTTCA+TGG - Chr8:2066172-2066191 MsG0880041979.01.T01:intron 40.0%
AAAGGAGAAGGTGATTCTTG+TGG - Chr8:2066372-2066391 MsG0880041979.01.T01:CDS 40.0%
AAGGAGAAGGTGATTCTTGT+GGG - Chr8:2066373-2066392 MsG0880041979.01.T01:CDS 40.0%
ACAAGAATCACCTTCTCCTT+TGG + Chr8:2066373-2066392 None:intergenic 40.0%
ACTAACGGAATCTGCATTCA+GGG + Chr8:2067124-2067143 None:intergenic 40.0%
AGTCACTATAGTCCCTGAAT+AGG - Chr8:2066984-2067003 MsG0880041979.01.T01:intron 40.0%
ATGAGTCGTCAATTTAGTCC+CGG - Chr8:2067009-2067028 MsG0880041979.01.T01:intron 40.0%
ATGGTTCCTAACATCTGCAA+TGG + Chr8:2066698-2066717 None:intergenic 40.0%
ATTGCAGATGTTAGGAACCA+TGG - Chr8:2066697-2066716 MsG0880041979.01.T01:intron 40.0%
GACCAACAAAGTCTACATTC+AGG - Chr8:2067163-2067182 MsG0880041979.01.T01:intron 40.0%
GACGACTCATTTCCTATTCA+GGG + Chr8:2066999-2067018 None:intergenic 40.0%
GAGTTTGGATCCAAACAACA+AGG + Chr8:2067516-2067535 None:intergenic 40.0%
GATACCCTTATCTGTTGCTA+TGG - Chr8:2066411-2066430 MsG0880041979.01.T01:CDS 40.0%
GTTGTTTGGATCCAAACTCT+TGG - Chr8:2067517-2067536 MsG0880041979.01.T01:CDS 40.0%
TATGGAATCTCTTCCTCCAA+AGG - Chr8:2066354-2066373 MsG0880041979.01.T01:CDS 40.0%
TCCCTGAATGTAGACTTTGT+TGG + Chr8:2067168-2067187 None:intergenic 40.0%
TGAATCTCTTGAACCTGGAT+TGG + Chr8:2066298-2066317 None:intergenic 40.0%
TGACGACTCATTTCCTATTC+AGG + Chr8:2067000-2067019 None:intergenic 40.0%
!! GTTACAACTATTGACTTGGC+TGG - Chr8:2066259-2066278 MsG0880041979.01.T01:intron 40.0%
!!! TTGTGGGTCATAGTTTTGGA+GGG - Chr8:2066389-2066408 MsG0880041979.01.T01:CDS 40.0%
AGAATCACCTTCTCCTTTGG+AGG + Chr8:2066370-2066389 None:intergenic 45.0%
ATCTCTTCCTCCAAAGGAGA+AGG - Chr8:2066360-2066379 MsG0880041979.01.T01:CDS 45.0%
CAGATGAGATGCCAAGAGTT+TGG + Chr8:2067531-2067550 None:intergenic 45.0%
GACTAACGGAATCTGCATTC+AGG + Chr8:2067125-2067144 None:intergenic 45.0%
GATCCAAACAACAAGGCAGT+TGG + Chr8:2067509-2067528 None:intergenic 45.0%
TATACCAACACCATGCACCA+TGG + Chr8:2066204-2066223 None:intergenic 45.0%
TTGTGGTATCAGTCCAATCC+AGG - Chr8:2066282-2066301 MsG0880041979.01.T01:intron 45.0%
!! ACTATTGACTTGGCTGGTTG+TGG - Chr8:2066265-2066284 MsG0880041979.01.T01:intron 45.0%
!! TGGTGCATGGTGTTGGTATA+AGG - Chr8:2066204-2066223 MsG0880041979.01.T01:intron 45.0%
!!! CTTGTGGGTCATAGTTTTGG+AGG - Chr8:2066388-2066407 MsG0880041979.01.T01:CDS 45.0%
!! AAAATAATAATCAAATTTAA+AGG + Chr8:2066769-2066788 None:intergenic 5.0%
AAGGCAGTTGGAGGACTGTT+TGG + Chr8:2067497-2067516 None:intergenic 50.0%
CCAAACAACAAGGCAGTTGG+AGG + Chr8:2067506-2067525 None:intergenic 50.0%
TCAACGCAACGTGTCTTTCC+CGG + Chr8:2066108-2066127 None:intergenic 50.0%
TTCGTGCTTGTTCATGGAGC+TGG - Chr8:2066178-2066197 MsG0880041979.01.T01:intron 50.0%
!! CCTCCAACTGCCTTGTTGTT+TGG - Chr8:2067503-2067522 MsG0880041979.01.T01:CDS 50.0%
CTTGTTCATGGAGCTGGCCA+TGG - Chr8:2066184-2066203 MsG0880041979.01.T01:intron 55.0%
ATGGAGCTGGCCATGGTGCA+TGG - Chr8:2066191-2066210 MsG0880041979.01.T01:intron 60.0%
CTGGCCATGGTGCATGGTGT+TGG - Chr8:2066197-2066216 MsG0880041979.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 2066097 2067778 2066097 ID=MsG0880041979.01;Name=MsG0880041979.01
Chr8 mRNA 2066097 2067778 2066097 ID=MsG0880041979.01.T01;Parent=MsG0880041979.01;Name=MsG0880041979.01.T01;_AED=0.53;_eAED=0.53;_QI=0|0|0|0.66|1|1|3|0|199
Chr8 exon 2067353 2067778 2067353 ID=MsG0880041979.01.T01:exon:1271;Parent=MsG0880041979.01.T01
Chr8 exon 2066304 2066432 2066304 ID=MsG0880041979.01.T01:exon:1270;Parent=MsG0880041979.01.T01
Chr8 exon 2066097 2066141 2066097 ID=MsG0880041979.01.T01:exon:1269;Parent=MsG0880041979.01.T01
Chr8 CDS 2067353 2067778 2067353 ID=MsG0880041979.01.T01:cds;Parent=MsG0880041979.01.T01
Chr8 CDS 2066304 2066432 2066304 ID=MsG0880041979.01.T01:cds;Parent=MsG0880041979.01.T01
Chr8 CDS 2066097 2066141 2066097 ID=MsG0880041979.01.T01:cds;Parent=MsG0880041979.01.T01
Gene Sequence

>MsG0880041979.01.T01

ATGTTTAACCGGGAAAGACACGTTGCGTTGATTCTTCTCTTCTTTATTCTTTCATTTTTCATTGGTGTTAATGGGAAACACTTCGTGCTTGTTCATGGAGCTGGCCATGGTGCATGGTGTTGGTATAAGGTTGCAACTATGCTTAAATCAGCTAGTCATAATGTTACAACTATTGACTTGGCTGGTTGTGGTATCAGTCCAATCCAGGTTCAAGAGATTCATTCAATTTCAAAATATTATGAACCTTTGATATCATTTATGGAATCTCTTCCTCCAAAGGAGAAGGTGATTCTTGTGGGTCATAGTTTTGGAGGGATACCCTTATCTGTTGCTATGGAAAAGTTCCCTAAGAAAATTTCTGTTGCAGTTTTTGTCACTGCATTAGTGATAAGTGAAACCCTTAATTTCACAACTGTAATTCAAGAGAATGAGAGAAGAACTCAACAAAATCCACCACAGTTATTGTTCTTAAATGGACCAAACAGTCCTCCAACTGCCTTGTTGTTTGGATCCAAACTCTTGGCATCTCATCTGTATCAATTATCGCCTAATGAGGGTTATTTCAAAGTTGGTTTTAAACCTTTAGATTTGTTGAGTTAA
Protein sequence

>MsG0880041979.01.T01

MFNRERHVALILLFFILSFFIGVNGKHFVLVHGAGHGAWCWYKVATMLKSASHNVTTIDLAGCGISPIQVQEIHSISKYYEPLISFMESLPPKEKVILVGHSFGGIPLSVAMEKFPKKISVAVFVTALVISETLNFTTVIQENERRTQQNPPQLLFLNGPNSPPTALLFGSKLLASHLYQLSPNEGYFKVGFKPLDLLS*