AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048387.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048387.01.T01 MTR_8g079120 95.769 260 11 0 1 260 1 260 0.0 522
MsG0080048387.01.T01 MTR_5g018365 62.698 252 94 0 9 260 10 261 1.60e-117 337
MsG0080048387.01.T01 MTR_8g079120 94.643 168 9 0 1 168 43 210 2.64e-117 335
MsG0080048387.01.T01 MTR_5g018350 59.600 250 101 0 11 260 7 256 1.10e-109 317
MsG0080048387.01.T01 MTR_5g018300 42.966 263 141 3 5 260 2 262 1.62e-73 225
MsG0080048387.01.T01 MTR_5g018320 45.525 257 131 4 11 260 5 259 9.24e-73 223
MsG0080048387.01.T01 MTR_8g007675 43.191 257 137 5 11 260 32 286 2.13e-68 213
MsG0080048387.01.T01 MTR_3g464040 41.797 256 141 4 10 260 18 270 1.17e-65 206
MsG0080048387.01.T01 MTR_5g018280 40.856 257 146 3 9 260 6 261 2.15e-65 204
MsG0080048387.01.T01 MTR_8g008660 41.797 256 141 4 10 260 26 278 5.05e-63 199
MsG0080048387.01.T01 MTR_8g008505 41.313 259 140 5 10 260 27 281 3.80e-61 194
MsG0080048387.01.T01 MTR_8g007670 40.385 260 145 5 9 260 5 262 2.30e-60 192
MsG0080048387.01.T01 MTR_8g008500 38.996 259 150 5 10 260 26 284 2.81e-58 187
MsG0080048387.01.T01 MTR_8g007670 39.062 256 110 5 9 260 5 218 2.48e-55 177
MsG0080048387.01.T01 MTR_7g015220 33.730 252 158 3 11 257 124 371 2.70e-37 135
MsG0080048387.01.T01 MTR_3g005410 33.333 258 160 4 7 257 90 342 1.70e-35 130
MsG0080048387.01.T01 MTR_3g093730 32.510 243 158 3 7 246 32 271 2.33e-34 125
MsG0080048387.01.T01 MTR_5g068100 31.020 245 156 3 9 246 28 266 5.56e-34 124
MsG0080048387.01.T01 MTR_3g093730 31.148 244 115 5 7 246 32 226 5.91e-30 112
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048387.01.T01 AT2G23620 54.086 257 114 2 9 261 7 263 1.36e-102 299
MsG0080048387.01.T01 AT2G23600 53.360 253 114 2 9 257 7 259 1.41e-95 281
MsG0080048387.01.T01 AT2G23600 53.360 253 114 2 9 257 22 274 1.88e-95 281
MsG0080048387.01.T01 AT2G23610 52.344 256 118 3 9 260 7 262 3.09e-93 275
MsG0080048387.01.T01 AT2G23580 50.195 257 123 2 9 260 6 262 3.80e-89 265
MsG0080048387.01.T01 AT2G23590 47.638 254 128 1 7 260 23 271 1.93e-88 264
MsG0080048387.01.T01 AT5G10300 49.416 257 124 2 9 261 4 258 3.36e-88 263
MsG0080048387.01.T01 AT4G37150 48.627 255 126 2 10 260 2 255 5.79e-87 259
MsG0080048387.01.T01 AT2G23550 48.249 257 128 2 9 260 6 262 1.11e-82 249
MsG0080048387.01.T01 AT2G23550 48.249 257 128 2 9 260 13 269 1.32e-82 249
MsG0080048387.01.T01 AT2G23560 46.063 254 135 2 9 260 6 259 5.20e-80 242
MsG0080048387.01.T01 AT2G23610 46.640 253 92 2 9 260 7 217 8.43e-78 234
MsG0080048387.01.T01 AT3G50440 43.478 253 139 2 12 260 22 274 7.15e-73 224
MsG0080048387.01.T01 AT2G23550 44.922 256 109 2 9 260 6 233 7.26e-69 213
MsG0080048387.01.T01 AT2G23600 53.049 164 73 2 9 168 22 185 2.71e-60 189
MsG0080048387.01.T01 AT2G23580 48.603 179 84 3 9 182 6 181 4.24e-54 174
MsG0080048387.01.T01 AT2G23570 47.753 178 89 1 87 260 1 178 8.22e-52 167
MsG0080048387.01.T01 AT2G23550 46.667 165 83 2 9 168 13 177 3.24e-49 161
MsG0080048387.01.T01 AT5G10300 48.193 166 80 2 9 170 4 167 6.96e-49 160
MsG0080048387.01.T01 AT4G37140 54.701 117 53 0 10 126 2 118 2.14e-45 149
MsG0080048387.01.T01 AT1G26360 32.669 251 164 2 10 257 188 436 1.04e-38 140
MsG0080048387.01.T01 AT4G09900 33.333 255 158 4 10 257 97 346 1.18e-38 138
MsG0080048387.01.T01 AT1G33990 32.308 260 167 4 3 257 90 345 3.75e-38 137
MsG0080048387.01.T01 AT3G29770 36.047 258 144 6 11 257 138 385 1.59e-37 136
MsG0080048387.01.T01 AT5G58310 32.700 263 160 5 7 257 1 258 2.57e-37 132
MsG0080048387.01.T01 AT4G37140 59.341 91 37 0 10 100 2 92 3.85e-37 127
MsG0080048387.01.T01 AT1G69240 31.518 257 161 6 10 257 186 436 1.15e-36 135
MsG0080048387.01.T01 AT4G16690 31.452 248 151 6 11 249 12 249 1.40e-32 120
MsG0080048387.01.T01 AT3G10870 29.876 241 163 3 11 246 20 259 2.62e-30 114
MsG0080048387.01.T01 AT3G29770 40.278 72 43 0 11 82 138 209 2.10e-12 65.9

Find 67 sgRNAs with CRISPR-Local

Find 272 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTAATCCCAGCATTT+TGG 0.157812 contig297end:+10936 MsG0080048387.01.T01:intergenic
GAGCTTATTGGACAAGAATT+TGG 0.162838 contig297end:+11291 MsG0080048387.01.T01:intergenic
GAGGCCAGGGTCCCTCTTTA+TGG 0.202954 contig297end:-11074 MsG0080048387.01.T01:CDS
GTTCTTGACCTTTCAGCTTC+TGG 0.234804 contig297end:-14654 MsG0080048387.01.T01:CDS
AACAAAACATCAATGTTCTT+TGG 0.296879 contig297end:-11316 MsG0080048387.01.T01:CDS
GCAAGATAACTTCTCTAAAC+AGG 0.300900 contig297end:-11038 MsG0080048387.01.T01:CDS
AGCTTATTGGACAAGAATTT+GGG 0.339872 contig297end:+11292 MsG0080048387.01.T01:intergenic
AACTTCTCTAAACAGGGTTA+TGG 0.360676 contig297end:-11031 MsG0080048387.01.T01:CDS
GGAGTGTTGATAGAGCTTAT+TGG 0.392660 contig297end:+11279 MsG0080048387.01.T01:intergenic
ACTTCTCTAAACAGGGTTAT+GGG 0.399672 contig297end:-11030 MsG0080048387.01.T01:CDS
AATGGAACAATTTCCAGAAA+AGG 0.417631 contig297end:-14490 MsG0080048387.01.T01:CDS
ATTCTTGTGGGTCATAGTCT+TGG 0.418009 contig297end:-14534 MsG0080048387.01.T01:CDS
ATCCAGTGTTGAAATTTCAA+TGG 0.421026 contig297end:+10962 MsG0080048387.01.T01:intergenic
GATTTAGCAGGATCTTGAAT+TGG 0.423617 contig297end:-11110 MsG0080048387.01.T01:intron
TGAACCATTGTTGAAGCTAA+TGG 0.426644 contig297end:-14583 MsG0080048387.01.T01:CDS
ATCTTCAAGTTTCTTCAAGT+TGG 0.431463 contig297end:+14629 MsG0080048387.01.T01:intergenic
GTGCACAAAATTTAATTGCT+AGG 0.449601 contig297end:-14770 MsG0080048387.01.T01:CDS
TGTCCAACCATCCAGCCGTC+GGG 0.450381 contig297end:+11359 MsG0080048387.01.T01:intergenic
TGCTTCTTATGTCATGGAAA+AGG 0.451368 contig297end:-14418 MsG0080048387.01.T01:intron
CACTGGATGATCCAAAATGC+TGG 0.456893 contig297end:-10947 MsG0080048387.01.T01:CDS
GATCAAAGGGGCAGATCATA+TGG 0.460208 contig297end:-10906 MsG0080048387.01.T01:CDS
ATGATGTATATGAGATCAAA+GGG 0.461047 contig297end:-10919 MsG0080048387.01.T01:CDS
CTTGTGGGTCATAGTCTTGG+AGG 0.464347 contig297end:-14531 MsG0080048387.01.T01:CDS
ATGGTGCTTGCCATGGTGCT+TGG 0.470545 contig297end:-14728 MsG0080048387.01.T01:CDS
TTCCATTGAAATTTCAACAC+TGG 0.470781 contig297end:-10964 MsG0080048387.01.T01:CDS
GCCAAGACTTTATTGAGGCC+AGG 0.472046 contig297end:-11088 MsG0080048387.01.T01:CDS
CACAATTCCACCAAATGAAA+AGG 0.475812 contig297end:-14559 MsG0080048387.01.T01:CDS
TACCCCGACGGCTGGATGGT+TGG 0.475841 contig297end:-11362 MsG0080048387.01.T01:CDS
CTTGCCATGGTGCTTGGAGT+TGG 0.476673 contig297end:-14722 MsG0080048387.01.T01:CDS
GAAGCATTGTGTTGAATGTC+CGG 0.482394 contig297end:+14435 MsG0080048387.01.T01:intergenic
CCCTGGCCTCAATAAAGTCT+TGG 0.486588 contig297end:+11087 MsG0080048387.01.T01:intergenic
ACACAATGCTTCTTATGTCA+TGG 0.491092 contig297end:-14424 MsG0080048387.01.T01:CDS
ATTGAGAGTACCCCGACGGC+TGG 0.496028 contig297end:-11370 MsG0080048387.01.T01:CDS
AATGAAAAGGTGATTCTTGT+GGG 0.497441 contig297end:-14546 MsG0080048387.01.T01:CDS
CTTGTACATGGTGCTTGCCA+TGG 0.498303 contig297end:-14735 MsG0080048387.01.T01:CDS
GTGTCCAACCATCCAGCCGT+CGG 0.513546 contig297end:+11358 MsG0080048387.01.T01:intergenic
ATTGTTTGCAATGAAGACCT+TGG 0.520269 contig297end:-10989 MsG0080048387.01.T01:CDS
AGAGAATTACATAGTTCTTG+TGG 0.522605 contig297end:+10869 MsG0080048387.01.T01:intergenic
CCAAGACTTTATTGAGGCCA+GGG 0.522924 contig297end:-11087 MsG0080048387.01.T01:CDS
GAAATTTCAATGGAATTCCA+AGG 0.525367 contig297end:+10972 MsG0080048387.01.T01:intergenic
AAGCATTATGTTCTTGTACA+TGG 0.531450 contig297end:-14747 MsG0080048387.01.T01:CDS
TTTCCAGAAAAGGTTGCTGT+TGG 0.543459 contig297end:-14480 MsG0080048387.01.T01:CDS
AATGATGTATATGAGATCAA+AGG 0.543714 contig297end:-10920 MsG0080048387.01.T01:CDS
AAATGAAAAGGTGATTCTTG+TGG 0.544198 contig297end:-14547 MsG0080048387.01.T01:CDS
AATTGGCCAAGACTTTATTG+AGG 0.557607 contig297end:-11093 MsG0080048387.01.T01:CDS
TGGTGCTTGGAGTTGGTACA+AGG 0.561033 contig297end:-14715 MsG0080048387.01.T01:CDS
AGAGTACCCCGACGGCTGGA+TGG 0.567562 contig297end:-11366 MsG0080048387.01.T01:CDS
GTGGCCATTAGCTTCAACAA+TGG 0.573860 contig297end:+14579 MsG0080048387.01.T01:intergenic
GAGTCAAGTCTTCCATAAAG+AGG 0.579389 contig297end:+11062 MsG0080048387.01.T01:intergenic
AGTTGGTTCCAGAAGCTGAA+AGG 0.584796 contig297end:+14646 MsG0080048387.01.T01:intergenic
AAGCCACGTTTAGAATCTGC+TGG 0.586149 contig297end:-14690 MsG0080048387.01.T01:CDS
ACTGGATGATCCAAAATGCT+GGG 0.589459 contig297end:-10946 MsG0080048387.01.T01:CDS
CAAGATAACTTCTCTAAACA+GGG 0.605122 contig297end:-11037 MsG0080048387.01.T01:CDS
ACTTAGCATAGCTCTTGCAA+TGG 0.605259 contig297end:-14508 MsG0080048387.01.T01:CDS
AGTCAAGTCTTCCATAAAGA+GGG 0.612508 contig297end:+11063 MsG0080048387.01.T01:intergenic
TTTAGAATCTGCTGGTCATG+TGG 0.623515 contig297end:-14682 MsG0080048387.01.T01:CDS
GACACTGAATTCTGCCAGTG+TGG 0.627184 contig297end:-11340 MsG0080048387.01.T01:CDS
TCTTCCATAAAGAGGGACCC+TGG 0.632528 contig297end:+11070 MsG0080048387.01.T01:intergenic
GTCCAACCATCCAGCCGTCG+GGG 0.632889 contig297end:+11360 MsG0080048387.01.T01:intergenic
ACGTGTAGTTACCTCAGTGG+AGG 0.650895 contig297end:+11258 MsG0080048387.01.T01:intergenic
TTAACGTGTAGTTACCTCAG+TGG 0.666283 contig297end:+11255 MsG0080048387.01.T01:intergenic
TTGCAAACAATAAAAGCACG+TGG 0.692906 contig297end:+11001 MsG0080048387.01.T01:intergenic
TGTACCAACTCCAAGCACCA+TGG 0.696634 contig297end:+14718 MsG0080048387.01.T01:intergenic
TGACCAGCAGATTCTAAACG+TGG 0.719220 contig297end:+14687 MsG0080048387.01.T01:intergenic
GTATATTGAGAGTACCCCGA+CGG 0.725457 contig297end:-11374 MsG0080048387.01.T01:CDS
TGATGTATATGAGATCAAAG+GGG 0.769291 contig297end:-10918 MsG0080048387.01.T01:CDS
CTATCAACACTCCTCCACTG+AGG 0.776664 contig297end:-11269 MsG0080048387.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAAAAAATAAGATTAATAA+TGG + contig297end:14207-14226 MsG0080048387.01.T01:intergenic 10.0%
!! ACATATAATAAAACATAAAA+AGG + contig297end:12360-12379 MsG0080048387.01.T01:intergenic 10.0%
!! ATATAATAAAACATAAAAAG+GGG + contig297end:12358-12377 MsG0080048387.01.T01:intergenic 10.0%
!! CATATAATAAAACATAAAAA+GGG + contig297end:12359-12378 MsG0080048387.01.T01:intergenic 10.0%
!! TTATAACAAAATTTAGATTA+GGG - contig297end:13652-13671 MsG0080048387.01.T01:intron 10.0%
!! TTTATAACAAAATTTAGATT+AGG - contig297end:13651-13670 MsG0080048387.01.T01:intron 10.0%
!! ATACATTTAGTATACAAAAT+TGG + contig297end:12121-12140 MsG0080048387.01.T01:intergenic 15.0%
!! CCTATATTTATAAAAACAAA+TGG + contig297end:13839-13858 MsG0080048387.01.T01:intergenic 15.0%
!! GAAAATAAATTAAAAAGTTG+TGG + contig297end:11544-11563 MsG0080048387.01.T01:intergenic 15.0%
!! TACTTCAGAAAATAATATAA+GGG + contig297end:11738-11757 MsG0080048387.01.T01:intergenic 15.0%
!! TATAATAAAACATAAAAAGG+GGG + contig297end:12357-12376 MsG0080048387.01.T01:intergenic 15.0%
!! TTAAGAAACTTTATACATAA+TGG - contig297end:13113-13132 MsG0080048387.01.T01:intron 15.0%
!! TTACTTCAGAAAATAATATA+AGG + contig297end:11739-11758 MsG0080048387.01.T01:intergenic 15.0%
!!! ATAAGTCTTATTTAATCTAA+CGG + contig297end:11410-11429 MsG0080048387.01.T01:intergenic 15.0%
!!! CCATTTGTTTTTATAAATAT+AGG - contig297end:13836-13855 MsG0080048387.01.T01:intron 15.0%
!!! GAATTTGTAAAATTTTGTTA+TGG - contig297end:11851-11870 MsG0080048387.01.T01:intron 15.0%
!!! TAGTTTTTATGAAATTTTGT+AGG - contig297end:11328-11347 MsG0080048387.01.T01:CDS 15.0%
!!! TTTATTTTGTTGATTTTCTT+AGG + contig297end:12595-12614 MsG0080048387.01.T01:intergenic 15.0%
!! AACATATGTAAACATGAATT+TGG + contig297end:12652-12671 MsG0080048387.01.T01:intergenic 20.0%
!! AGAATAGTTAATTAAGAAGA+TGG - contig297end:13144-13163 MsG0080048387.01.T01:intron 20.0%
!! ATAATAAAACATAAAAAGGG+GGG + contig297end:12356-12375 MsG0080048387.01.T01:intergenic 20.0%
!! CATTAATTATTGAAGAGATA+TGG - contig297end:14158-14177 MsG0080048387.01.T01:intron 20.0%
!! CTAATTGTGTAAATCATAAA+AGG - contig297end:12839-12858 MsG0080048387.01.T01:intron 20.0%
!! TCACAAATATGATTTCTATA+TGG - contig297end:11284-11303 MsG0080048387.01.T01:CDS 20.0%
!! TCATACAAGAAAAATAGATT+AGG - contig297end:13876-13895 MsG0080048387.01.T01:intron 20.0%
!! TGACAATTAAAAAGTAATGA+AGG + contig297end:14058-14077 MsG0080048387.01.T01:intergenic 20.0%
!! TTATTTGTCCTTTACAATAA+AGG - contig297end:12396-12415 MsG0080048387.01.T01:intron 20.0%
!! TTGAAGTTTCCATTAAAAAA+TGG - contig297end:14444-14463 MsG0080048387.01.T01:CDS 20.0%
!!! AATTGTACTCCATTTTTTAA+TGG + contig297end:14456-14475 MsG0080048387.01.T01:intergenic 20.0%
!!! AATTTTAAAACGACAAGTAA+GGG + contig297end:14130-14149 MsG0080048387.01.T01:intergenic 20.0%
!!! TAACTATTTAGCATTTTTGT+CGG - contig297end:12259-12278 MsG0080048387.01.T01:intron 20.0%
!!! TGGAAAATTTGAGTTATAAA+AGG + contig297end:11765-11784 MsG0080048387.01.T01:intergenic 20.0%
!!! TTTCCATTTTTTTTTGTCAA+TGG + contig297end:11689-11708 MsG0080048387.01.T01:intergenic 20.0%
!!! TTTTTATGAAATTTTGTAGG+TGG - contig297end:11331-11350 MsG0080048387.01.T01:CDS 20.0%
! AAAAAAAACTTTCCAATGGT+GGG + contig297end:12453-12472 MsG0080048387.01.T01:intergenic 25.0%
! AAATGTCACCTACAATAAAA+TGG - contig297end:13374-13393 MsG0080048387.01.T01:intron 25.0%
! AACAAAACATCAATGTTCTT+TGG - contig297end:14299-14318 MsG0080048387.01.T01:intron 25.0%
! AATGATGTATATGAGATCAA+AGG - contig297end:14695-14714 MsG0080048387.01.T01:CDS 25.0%
! AATTACAGTTTCTCTCATTA+TGG + contig297end:12712-12731 MsG0080048387.01.T01:intergenic 25.0%
! ACTAATAAAGACAAACTACT+TGG - contig297end:14483-14502 MsG0080048387.01.T01:CDS 25.0%
! AGAAGAACATGTAATAGAAA+AGG + contig297end:12314-12333 MsG0080048387.01.T01:intergenic 25.0%
! ATATAAAACGACAAGTAAGT+AGG + contig297end:13994-14013 MsG0080048387.01.T01:intergenic 25.0%
! ATGATGTATATGAGATCAAA+GGG - contig297end:14696-14715 MsG0080048387.01.T01:CDS 25.0%
! CATTTAGTATACAAAATTGG+TGG + contig297end:12118-12137 MsG0080048387.01.T01:intergenic 25.0%
! GAAGAACATGTAATAGAAAA+GGG + contig297end:12313-12332 MsG0080048387.01.T01:intergenic 25.0%
! TAGTTCTTTACTTGATCTAA+TGG + contig297end:12478-12497 MsG0080048387.01.T01:intergenic 25.0%
! TCAATGGTGATATTTATTGT+GGG + contig297end:11673-11692 MsG0080048387.01.T01:intergenic 25.0%
! TCACCATTGACAAAAAAAAA+TGG - contig297end:11683-11702 MsG0080048387.01.T01:intron 25.0%
! TCGACAATTAAGAACTAATT+AGG + contig297end:12768-12787 MsG0080048387.01.T01:intergenic 25.0%
! TTAATCAAACACATCTTGTT+TGG + contig297end:13072-13091 MsG0080048387.01.T01:intergenic 25.0%
!! GAGTTAAATCTTGATACTTT+TGG + contig297end:13525-13544 MsG0080048387.01.T01:intergenic 25.0%
!! TTCCTCTTAATTTGAATTTG+TGG - contig297end:13620-13639 MsG0080048387.01.T01:intron 25.0%
!!! AAAATTTTGTTATGGAACGA+AGG - contig297end:11859-11878 MsG0080048387.01.T01:intron 25.0%
!!! GAATTTTAAAACGACAAGTA+AGG + contig297end:14131-14150 MsG0080048387.01.T01:intergenic 25.0%
!!! TTCTAAGACAATTAAGTAAC+TGG + contig297end:14097-14116 MsG0080048387.01.T01:intergenic 25.0%
!!! TTTGTTGATTTTCTTAGGAT+TGG + contig297end:12590-12609 MsG0080048387.01.T01:intergenic 25.0%
AAATGAAAAGGTGATTCTTG+TGG - contig297end:11068-11087 MsG0080048387.01.T01:CDS 30.0%
AAATGACAAAGTAGAAGAGA+TGG - contig297end:12888-12907 MsG0080048387.01.T01:intron 30.0%
AAATGCCACCTTTATTGTAA+AGG + contig297end:12407-12426 MsG0080048387.01.T01:intergenic 30.0%
AAGCATTATGTTCTTGTACA+TGG - contig297end:10868-10887 MsG0080048387.01.T01:CDS 30.0%
AATGAAAAGGTGATTCTTGT+GGG - contig297end:11069-11088 MsG0080048387.01.T01:CDS 30.0%
AATGGAACAATTTCCAGAAA+AGG - contig297end:11125-11144 MsG0080048387.01.T01:intron 30.0%
AATTGTCACATTTACACTTG+TGG - contig297end:14070-14089 MsG0080048387.01.T01:intron 30.0%
ACACAATTAGAAACCATGAA+CGG + contig297end:12829-12848 MsG0080048387.01.T01:intergenic 30.0%
AGAGAATTACATAGTTCTTG+TGG + contig297end:14749-14768 MsG0080048387.01.T01:intergenic 30.0%
AGCTTATTGGACAAGAATTT+GGG + contig297end:14326-14345 MsG0080048387.01.T01:intergenic 30.0%
AGGACACTTAAAAAGATATC+GGG - contig297end:12208-12227 MsG0080048387.01.T01:intron 30.0%
ATCTGTCTTGCAATGATTAA+GGG + contig297end:12738-12757 MsG0080048387.01.T01:intergenic 30.0%
ATGTTCATCATTTCATCCAA+TGG - contig297end:13304-13323 MsG0080048387.01.T01:intron 30.0%
ATTAAGAAGATGGAGAGATA+TGG - contig297end:13154-13173 MsG0080048387.01.T01:intron 30.0%
ATTGAAGAGATATGGAATTG+AGG - contig297end:14166-14185 MsG0080048387.01.T01:intron 30.0%
CAAAAAAAACTTTCCAATGG+TGG + contig297end:12454-12473 MsG0080048387.01.T01:intergenic 30.0%
CAAAGCAAAACTTTCCATTT+CGG + contig297end:13402-13421 MsG0080048387.01.T01:intergenic 30.0%
CAAGATAACTTCTCTAAACA+GGG - contig297end:14578-14597 MsG0080048387.01.T01:CDS 30.0%
CAGGACACTTAAAAAGATAT+CGG - contig297end:12207-12226 MsG0080048387.01.T01:intron 30.0%
CTTAGCAACTATAGAATAGA+CGG - contig297end:12932-12951 MsG0080048387.01.T01:intron 30.0%
GAAAGAACATTAATTCAGTG+TGG + contig297end:11453-11472 MsG0080048387.01.T01:intergenic 30.0%
GAAATTTCAATGGAATTCCA+AGG + contig297end:14646-14665 MsG0080048387.01.T01:intergenic 30.0%
GACCACAAATTCAAATTAAG+AGG + contig297end:13625-13644 MsG0080048387.01.T01:intergenic 30.0%
GATTCTCTCAAACTTTACAT+GGG + contig297end:13688-13707 MsG0080048387.01.T01:intergenic 30.0%
GGTCAAAAAAAACTTTCCAA+TGG + contig297end:12457-12476 MsG0080048387.01.T01:intergenic 30.0%
GTAAAAAAACCATGTCTCTA+GGG + contig297end:11970-11989 MsG0080048387.01.T01:intergenic 30.0%
GTCAATGGTGATATTTATTG+TGG + contig297end:11674-11693 MsG0080048387.01.T01:intergenic 30.0%
GTGCACAAAATTTAATTGCT+AGG - contig297end:10845-10864 MsG0080048387.01.T01:CDS 30.0%
TAAACATGAATTTGGAAGAG+TGG + contig297end:12644-12663 MsG0080048387.01.T01:intergenic 30.0%
TATAGTACTAGTATGAGACA+AGG + contig297end:14398-14417 MsG0080048387.01.T01:intergenic 30.0%
TCGAGTACTTACATTAGAAA+AGG + contig297end:11573-11592 MsG0080048387.01.T01:intergenic 30.0%
TGACATGAGAAAGACATTAA+TGG + contig297end:11641-11660 MsG0080048387.01.T01:intergenic 30.0%
TGACTTGAATTCAAGTAAGT+AGG + contig297end:13950-13969 MsG0080048387.01.T01:intergenic 30.0%
TGATGTATATGAGATCAAAG+GGG - contig297end:14697-14716 MsG0080048387.01.T01:CDS 30.0%
TGATTCTCTCAAACTTTACA+TGG + contig297end:13689-13708 MsG0080048387.01.T01:intergenic 30.0%
TGGAAAGAAGAAAGAAGATT+GGG - contig297end:13231-13250 MsG0080048387.01.T01:intron 30.0%
TTCCATTGAAATTTCAACAC+TGG - contig297end:14651-14670 MsG0080048387.01.T01:CDS 30.0%
TTCTAATGTAAGTACTCGAT+AGG - contig297end:11574-11593 MsG0080048387.01.T01:intron 30.0%
TTGAAGAGATATGGAATTGA+GGG - contig297end:14167-14186 MsG0080048387.01.T01:intron 30.0%
TTTGTCCTTTACAATAAAGG+TGG - contig297end:12399-12418 MsG0080048387.01.T01:intron 30.0%
! AAATATTTACAGAGTGTCTC+AGG - contig297end:12188-12207 MsG0080048387.01.T01:intron 30.0%
! ACAAGAATCACCTTTTCATT+TGG + contig297end:11069-11088 MsG0080048387.01.T01:intergenic 30.0%
! ACAATAAAATGGTACCGAAA+TGG - contig297end:13385-13404 MsG0080048387.01.T01:intron 30.0%
! ATCCAGTGTTGAAATTTCAA+TGG + contig297end:14656-14675 MsG0080048387.01.T01:intergenic 30.0%
! ATCTTCAAGTTTCTTCAAGT+TGG + contig297end:10989-11008 MsG0080048387.01.T01:intergenic 30.0%
! TATTTAGCATTTTTGTCGGT+GGG - contig297end:12263-12282 MsG0080048387.01.T01:intron 30.0%
! TCAATTTTTAACCCAGACAA+TGG - contig297end:11927-11946 MsG0080048387.01.T01:intron 30.0%
! TTTCGGTACCATTTTATTGT+AGG + contig297end:13385-13404 MsG0080048387.01.T01:intergenic 30.0%
! TTTCTTAACAGCTTTTATGC+CGG - contig297end:11161-11180 MsG0080048387.01.T01:intron 30.0%
!! AAATTTTGTAGGTGGATTCT+AGG - contig297end:11339-11358 MsG0080048387.01.T01:CDS 30.0%
!! AACAAATGGATTACACATTG+CGG + contig297end:13825-13844 MsG0080048387.01.T01:intergenic 30.0%
!! AATTTTGTAGGTGGATTCTA+GGG - contig297end:11340-11359 MsG0080048387.01.T01:CDS 30.0%
!! ATGCTTGTTTTTCATGTTGA+AGG - contig297end:13200-13219 MsG0080048387.01.T01:intron 30.0%
!! ATTTTCTTAGGATTGGCAAT+GGG + contig297end:12583-12602 MsG0080048387.01.T01:intergenic 30.0%
!! GGGGGAAAAGTATATTTTAA+GGG + contig297end:12338-12357 MsG0080048387.01.T01:intergenic 30.0%
!! TTGATACTTTTGGAAACGAT+AGG + contig297end:13515-13534 MsG0080048387.01.T01:intergenic 30.0%
!!! ACTTTGTCATTTTTGGTTGT+CGG + contig297end:12880-12899 MsG0080048387.01.T01:intergenic 30.0%
!!! CTCTTCTACTTTGTCATTTT+TGG + contig297end:12887-12906 MsG0080048387.01.T01:intergenic 30.0%
AAAGAAGAGGAAGAAAGCTA+TGG + contig297end:12547-12566 MsG0080048386.01.T01:intergenic 35.0%
AACTTCTCTAAACAGGGTTA+TGG - contig297end:14584-14603 MsG0080048387.01.T01:CDS 35.0%
AAGACTTATGCGATCTCATT+AGG - contig297end:11421-11440 MsG0080048387.01.T01:intron 35.0%
AATAAAGGTGGCATTTCACA+TGG - contig297end:12411-12430 MsG0080048387.01.T01:intron 35.0%
AATTGGCCAAGACTTTATTG+AGG - contig297end:14522-14541 MsG0080048387.01.T01:CDS 35.0%
ACAAACTACTTGGATTTAGC+AGG - contig297end:14493-14512 MsG0080048387.01.T01:CDS 35.0%
ACACAATGCTTCTTATGTCA+TGG - contig297end:11191-11210 MsG0080048387.01.T01:intron 35.0%
ACTTCTCTAAACAGGGTTAT+GGG - contig297end:14585-14604 MsG0080048387.01.T01:CDS 35.0%
AGAAAGCTATGGATATGAGA+TGG + contig297end:12536-12555 MsG0080048387.01.T01:intergenic 35.0%
AGTAGGACTATTGAGGTTTA+TGG + contig297end:13933-13952 MsG0080048387.01.T01:intergenic 35.0%
AGTCAAGTCTTCCATAAAGA+GGG + contig297end:14555-14574 MsG0080048387.01.T01:intergenic 35.0%
ATAAAGGTGGCATTTCACAT+GGG - contig297end:12412-12431 MsG0080048387.01.T01:intron 35.0%
ATACAAAATTGGTGGAGTCT+AGG + contig297end:12110-12129 MsG0080048387.01.T01:intergenic 35.0%
ATGCGTTAGATCTTAGCATT+TGG - contig297end:13006-13025 MsG0080048387.01.T01:intron 35.0%
ATTGCAATCTTCATTGACGT+TGG + contig297end:13712-13731 MsG0080048387.01.T01:intergenic 35.0%
ATTGTAGGTGACATTTCACA+TGG + contig297end:13370-13389 MsG0080048387.01.T01:intergenic 35.0%
ATTGTTTGCAATGAAGACCT+TGG - contig297end:14626-14645 MsG0080048387.01.T01:CDS 35.0%
ATTTCACCATCGAAGCATAA+TGG - contig297end:11818-11837 MsG0080048387.01.T01:intron 35.0%
CACAATTCCACCAAATGAAA+AGG - contig297end:11056-11075 MsG0080048387.01.T01:CDS 35.0%
CATGAGAAAGACATTAATGG+AGG + contig297end:11638-11657 MsG0080048387.01.T01:intergenic 35.0%
CTGGAAAGAAGAAAGAAGAT+TGG - contig297end:13230-13249 MsG0080048387.01.T01:intron 35.0%
GAAAGCTATGGATATGAGAT+GGG + contig297end:12535-12554 MsG0080048387.01.T01:intergenic 35.0%
GACACATAACACTATAAAGC+TGG + contig297end:13272-13291 MsG0080048387.01.T01:intergenic 35.0%
GAGCTTATTGGACAAGAATT+TGG + contig297end:14327-14346 MsG0080048387.01.T01:intergenic 35.0%
GATCTGTCTTGCAATGATTA+AGG + contig297end:12739-12758 MsG0080048387.01.T01:intergenic 35.0%
GATTTAGCAGGATCTTGAAT+TGG - contig297end:14505-14524 MsG0080048387.01.T01:CDS 35.0%
GCAAGATAACTTCTCTAAAC+AGG - contig297end:14577-14596 MsG0080048387.01.T01:CDS 35.0%
GGAAAGAAGAAAGAAGATTG+GGG - contig297end:13232-13251 MsG0080048387.01.T01:intron 35.0%
GGAAAGTTAATTGTGACCAT+TGG + contig297end:13323-13342 MsG0080048387.01.T01:intergenic 35.0%
GGACACTTAAAAAGATATCG+GGG - contig297end:12209-12228 MsG0080048387.01.T01:intron 35.0%
GGTAAAAAAACCATGTCTCT+AGG + contig297end:11971-11990 MsG0080048387.01.T01:intergenic 35.0%
GGTACAAAAGCTATTGACAT+GGG - contig297end:12953-12972 MsG0080048387.01.T01:intron 35.0%
GTACAAAAGCTATTGACATG+GGG - contig297end:12954-12973 MsG0080048387.01.T01:intron 35.0%
TACAAAATTGGTGGAGTCTA+GGG + contig297end:12109-12128 MsG0080048387.01.T01:intergenic 35.0%
TATTTCCACAACCATTGTCT+GGG + contig297end:11941-11960 MsG0080048387.01.T01:intergenic 35.0%
TCAAGTAAGTAGGACTATTG+AGG + contig297end:13940-13959 MsG0080048387.01.T01:intergenic 35.0%
TGAAAGAAACTGATGCCTAA+AGG + contig297end:13473-13492 MsG0080048387.01.T01:intergenic 35.0%
TGAACCATTGTTGAAGCTAA+TGG - contig297end:11032-11051 MsG0080048387.01.T01:CDS 35.0%
TGAATTTCCATTTGTGTGGA+TGG - contig297end:11884-11903 MsG0080048387.01.T01:intron 35.0%
TGCGGTTGACACAAATTAAA+AGG + contig297end:13807-13826 MsG0080048387.01.T01:intergenic 35.0%
TGCTTCTTATGTCATGGAAA+AGG - contig297end:11197-11216 MsG0080048387.01.T01:intron 35.0%
TGTTGGATAGCGATAATTCA+AGG + contig297end:13427-13446 MsG0080048387.01.T01:intergenic 35.0%
TTATTTCCACAACCATTGTC+TGG + contig297end:11942-11961 MsG0080048387.01.T01:intergenic 35.0%
TTGGAAACGATAGGTAAGTA+GGG + contig297end:13506-13525 MsG0080048387.01.T01:intergenic 35.0%
TTGTAGGTGACATTTCACAT+GGG + contig297end:13369-13388 MsG0080048387.01.T01:intergenic 35.0%
TTTCACCATCGAAGCATAAT+GGG - contig297end:11819-11838 MsG0080048387.01.T01:intron 35.0%
TTTGGAAACGATAGGTAAGT+AGG + contig297end:13507-13526 MsG0080048387.01.T01:intergenic 35.0%
! AGAATCACCTTTTCATTTGG+TGG + contig297end:11066-11085 MsG0080048387.01.T01:intergenic 35.0%
! AGATTTGAAGTTGAGAGAGT+AGG + contig297end:12508-12527 MsG0080048387.01.T01:intergenic 35.0%
! CATAGATGTGATTTGTGTTC+TGG + contig297end:13773-13792 MsG0080048387.01.T01:intergenic 35.0%
! CATCATTAATCCCAGCATTT+TGG + contig297end:14682-14701 MsG0080048387.01.T01:intergenic 35.0%
! CTATTTAGCATTTTTGTCGG+TGG - contig297end:12262-12281 MsG0080048387.01.T01:intron 35.0%
! GAAGCATAATGGGAAAAATC+TGG - contig297end:11829-11848 MsG0080048387.01.T01:intron 35.0%
! TCAGTGTTTCTGAGTATTCA+CGG + contig297end:11502-11521 MsG0080048387.01.T01:intergenic 35.0%
! TTGCAAACAATAAAAGCACG+TGG + contig297end:14617-14636 MsG0080048387.01.T01:intergenic 35.0%
! TTTTTCCCATTATGCTTCGA+TGG + contig297end:11827-11846 MsG0080048387.01.T01:intergenic 35.0%
!! AATCTAACGGTTAAGTTGAG+TGG + contig297end:11397-11416 MsG0080048387.01.T01:intergenic 35.0%
!! CTTTTCATTTGGTGGAATTG+TGG + contig297end:11058-11077 MsG0080048387.01.T01:intergenic 35.0%
!! GATTTTCTTAGGATTGGCAA+TGG + contig297end:12584-12603 MsG0080048387.01.T01:intergenic 35.0%
!! GGGGGGAAAAGTATATTTTA+AGG + contig297end:12339-12358 MsG0080048387.01.T01:intergenic 35.0%
!! TTTTCTTAGGATTGGCAATG+GGG + contig297end:12582-12601 MsG0080048387.01.T01:intergenic 35.0%
!!! TTGATGTTTTGTTTCCACAC+TGG + contig297end:14292-14311 MsG0080048387.01.T01:intergenic 35.0%
ACTGGATGATCCAAAATGCT+GGG - contig297end:14669-14688 MsG0080048387.01.T01:CDS 40.0%
ACTTAGCATAGCTCTTGCAA+TGG - contig297end:11107-11126 MsG0080048387.01.T01:intron 40.0%
ATTCTTGTGGGTCATAGTCT+TGG - contig297end:11081-11100 MsG0080048387.01.T01:CDS 40.0%
CACAATTAACTTTCCCATGG+TGG - contig297end:13328-13347 MsG0080048387.01.T01:intron 40.0%
CCATGAACGGAAGTTAAAGA+TGG + contig297end:12816-12835 MsG0080048387.01.T01:intergenic 40.0%
CGGTACAAAAGCTATTGACA+TGG - contig297end:12952-12971 MsG0080048387.01.T01:intron 40.0%
CGTGCTTGATATTGAAGATG+CGG - contig297end:11788-11807 MsG0080048387.01.T01:intron 40.0%
CTTCAATATCAAGCACGCAA+TGG + contig297end:11785-11804 MsG0080048387.01.T01:intergenic 40.0%
GAGTCAAGTCTTCCATAAAG+AGG + contig297end:14556-14575 MsG0080048387.01.T01:intergenic 40.0%
GGACTGAATTTCCATTTGTG+TGG - contig297end:11880-11899 MsG0080048387.01.T01:intron 40.0%
GGTCACAATTAACTTTCCCA+TGG - contig297end:13325-13344 MsG0080048387.01.T01:intron 40.0%
GTGGAGTAACACACATTTGT+TGG + contig297end:13444-13463 MsG0080048387.01.T01:intergenic 40.0%
TCATGTTGAAGGAACGAAAC+TGG - contig297end:13211-13230 MsG0080048387.01.T01:intron 40.0%
TTAACGTGTAGTTACCTCAG+TGG + contig297end:14363-14382 MsG0080048387.01.T01:intergenic 40.0%
TTACTCCACAGTTCACCTTT+AGG - contig297end:13455-13474 MsG0080048387.01.T01:intron 40.0%
TTTAACCCAGACAATGGTTG+TGG - contig297end:11933-11952 MsG0080048387.01.T01:intron 40.0%
TTTCCAGAAAAGGTTGCTGT+TGG - contig297end:11135-11154 MsG0080048387.01.T01:intron 40.0%
! AAACTTTCCAATGGTGGGAA+AGG + contig297end:12448-12467 MsG0080048387.01.T01:intergenic 40.0%
! CCATCTTTAACTTCCGTTCA+TGG - contig297end:12813-12832 MsG0080048387.01.T01:intron 40.0%
! TTAACTTTCCCATGGTGGAA+AGG - contig297end:13333-13352 MsG0080048387.01.T01:intron 40.0%
! TTTAGAATCTGCTGGTCATG+TGG - contig297end:10933-10952 MsG0080048387.01.T01:CDS 40.0%
! TTTCTTAGGATTGGCAATGG+GGG + contig297end:12581-12600 MsG0080048387.01.T01:intergenic 40.0%
!! GAAGCATTGTGTTGAATGTC+CGG + contig297end:11183-11202 MsG0080048387.01.T01:intergenic 40.0%
!! GGAGTGTTGATAGAGCTTAT+TGG + contig297end:14339-14358 MsG0080048387.01.T01:intergenic 40.0%
!!! ACATGGTTTTTTTACCAGCG+AGG - contig297end:11975-11994 MsG0080048387.01.T01:intron 40.0%
!!! ATGGTTTTTTCGAACCTTGC+AGG + contig297end:13914-13933 MsG0080048387.01.T01:intergenic 40.0%
!!! CATGGTTTTTTTACCAGCGA+GGG - contig297end:11976-11995 MsG0080048387.01.T01:intron 40.0%
!!! GTCATTTTTGGTTGTCGGTT+TGG + contig297end:12875-12894 MsG0080048387.01.T01:intergenic 40.0%
AGGTGACATTTCACATGGGA+AGG + contig297end:13365-13384 MsG0080048387.01.T01:intergenic 45.0%
ATAACCTGACCCTAGAGACA+TGG - contig297end:11958-11977 MsG0080048387.01.T01:intron 45.0%
CAAAAGCTATTGACATGGGG+AGG - contig297end:12957-12976 MsG0080048387.01.T01:intron 45.0%
CACTGGATGATCCAAAATGC+TGG - contig297end:14668-14687 MsG0080048387.01.T01:CDS 45.0%
CCAAGACTTTATTGAGGCCA+GGG - contig297end:14528-14547 MsG0080048387.01.T01:CDS 45.0%
GATCAAAGGGGCAGATCATA+TGG - contig297end:14709-14728 MsG0080048387.01.T01:CDS 45.0%
GGATTATGACGGCAAAGAAG+AGG + contig297end:12560-12579 MsG0080048387.01.T01:intergenic 45.0%
GGTGACATTTCACATGGGAA+GGG + contig297end:13364-13383 MsG0080048387.01.T01:intergenic 45.0%
GTTCTTGACCTTTCAGCTTC+TGG - contig297end:10961-10980 MsG0080048387.01.T01:CDS 45.0%
TGACCAGCAGATTCTAAACG+TGG + contig297end:10931-10950 MsG0080048387.01.T01:intergenic 45.0%
TGATGCCTAAAGGTGAACTG+TGG + contig297end:13463-13482 MsG0080048387.01.T01:intergenic 45.0%
TGGTTGTGATCCAGTGTAGA+CGG - contig297end:12006-12025 MsG0080048387.01.T01:intron 45.0%
TTGGCAATGGGGGATTATGA+CGG + contig297end:12571-12590 MsG0080048387.01.T01:intergenic 45.0%
TTGTTGTACACCGTCTACAC+TGG + contig297end:12019-12038 MsG0080048387.01.T01:intergenic 45.0%
! AAGCCACGTTTAGAATCTGC+TGG - contig297end:10925-10944 MsG0080048387.01.T01:CDS 45.0%
! ACACCAACAGCAACCTTTTC+TGG + contig297end:11141-11160 MsG0080048387.01.T01:intergenic 45.0%
! AGTTGGTTCCAGAAGCTGAA+AGG + contig297end:10972-10991 MsG0080048387.01.T01:intergenic 45.0%
! GTGGCCATTAGCTTCAACAA+TGG + contig297end:11039-11058 MsG0080048387.01.T01:intergenic 45.0%
! GTGTTTCTGAGTATTCACGG+TGG + contig297end:11499-11518 MsG0080048387.01.T01:intergenic 45.0%
!! AAAACCATGTCTCTAGGGTC+AGG + contig297end:11965-11984 MsG0080048387.01.T01:intergenic 45.0%
!! AGCATTTTTGTCGGTGGGTT+AGG - contig297end:12268-12287 MsG0080048387.01.T01:intron 45.0%
!! GTATATTGAGAGTACCCCGA+CGG - contig297end:14241-14260 MsG0080048387.01.T01:intron 45.0%
!!! AAATTATTCTTTAAAAAAAT+CGG + contig297end:12159-12178 MsG0080048387.01.T01:intergenic 5.0%
!!! TAAATTTTGTTATAAAAAAA+TGG + contig297end:13647-13666 MsG0080048387.01.T01:intergenic 5.0%
ACGTGTAGTTACCTCAGTGG+AGG + contig297end:14360-14379 MsG0080048387.01.T01:intergenic 50.0%
AGGGTGATTCCTTTCCACCA+TGG + contig297end:13345-13364 MsG0080048387.01.T01:intergenic 50.0%
AGGTGGCATTTCACATGGGA+AGG - contig297end:12416-12435 MsG0080048387.01.T01:intron 50.0%
CACTCGTCCATCCACACAAA+TGG + contig297end:11894-11913 MsG0080048387.01.T01:intergenic 50.0%
CCCTGGCCTCAATAAAGTCT+TGG + contig297end:14531-14550 MsG0080048387.01.T01:intergenic 50.0%
CCTCTTAATAGTGCTCCACC+GGG - contig297end:12066-12085 MsG0080048387.01.T01:intron 50.0%
CTATCAACACTCCTCCACTG+AGG - contig297end:14346-14365 MsG0080048387.01.T01:intron 50.0%
CTTGTACATGGTGCTTGCCA+TGG - contig297end:10880-10899 MsG0080048387.01.T01:CDS 50.0%
GACACTGAATTCTGCCAGTG+TGG - contig297end:14275-14294 MsG0080048387.01.T01:intron 50.0%
GCCAAGACTTTATTGAGGCC+AGG - contig297end:14527-14546 MsG0080048387.01.T01:CDS 50.0%
GCCTCTTAATAGTGCTCCAC+CGG - contig297end:12065-12084 MsG0080048387.01.T01:intron 50.0%
GGAGAAACACATCTCCTGCA+AGG - contig297end:13897-13916 MsG0080048387.01.T01:intron 50.0%
GGCTCTATTAAGTCCCTCAC+CGG - contig297end:11367-11386 MsG0080048387.01.T01:CDS 50.0%
GGGTGATTCCTTTCCACCAT+GGG + contig297end:13344-13363 MsG0080048387.01.T01:intergenic 50.0%
GGTGATTCCTTTCCCACCAT+TGG - contig297end:12438-12457 MsG0080048387.01.T01:intron 50.0%
GGTGGCATTTCACATGGGAA+GGG - contig297end:12417-12436 MsG0080048387.01.T01:intron 50.0%
GTGAGGGTCCAATTAAGTCC+CGG + contig297end:12087-12106 MsG0080048387.01.T01:intergenic 50.0%
TCTATTAAGTCCCTCACCGG+TGG - contig297end:11370-11389 MsG0080048387.01.T01:CDS 50.0%
TCTTCCATAAAGAGGGACCC+TGG + contig297end:14548-14567 MsG0080048387.01.T01:intergenic 50.0%
TGTACCAACTCCAAGCACCA+TGG + contig297end:10900-10919 MsG0080048387.01.T01:intergenic 50.0%
TTACCAGCGAGGGAAGAAGA+TGG - contig297end:11986-12005 MsG0080048387.01.T01:intron 50.0%
! AATTGGTGGAGTCTAGGGTG+AGG + contig297end:12104-12123 MsG0080048387.01.T01:intergenic 50.0%
! ATTGGTGGAGTCTAGGGTGA+GGG + contig297end:12103-12122 MsG0080048387.01.T01:intergenic 50.0%
! CTTGTGGGTCATAGTCTTGG+AGG - contig297end:11084-11103 MsG0080048387.01.T01:CDS 50.0%
!! GGTTAAGTTGAGTGGTCCAC+CGG + contig297end:11389-11408 MsG0080048387.01.T01:intergenic 50.0%
!! GTAGGTGGATTCTAGGGTGA+GGG - contig297end:11346-11365 MsG0080048387.01.T01:CDS 50.0%
!! TGGTGCTTGGAGTTGGTACA+AGG - contig297end:10900-10919 MsG0080048387.01.T01:CDS 50.0%
!! TGTAGGTGGATTCTAGGGTG+AGG - contig297end:11345-11364 MsG0080048387.01.T01:CDS 50.0%
AGGGTCCAATTAAGTCCCGG+TGG + contig297end:12084-12103 MsG0080048387.01.T01:intergenic 55.0%
ATGGTGCTTGCCATGGTGCT+TGG - contig297end:10887-10906 MsG0080048387.01.T01:CDS 55.0%
CAACCATCTTCTTCCCTCGC+TGG + contig297end:11992-12011 MsG0080048387.01.T01:intergenic 55.0%
CACGGTGGAGAGAGTGAGAT+TGG + contig297end:11484-11503 MsG0080048387.01.T01:intergenic 55.0%
CTTGCCATGGTGCTTGGAGT+TGG - contig297end:10893-10912 MsG0080048387.01.T01:CDS 55.0%
GTGCTCCACCGGGACTTAAT+TGG - contig297end:12076-12095 MsG0080048387.01.T01:intron 55.0%
! CCCGGTGGAGCACTATTAAG+AGG + contig297end:12069-12088 MsG0080048387.01.T01:intergenic 55.0%
AGTTGAGTGGTCCACCGGTG+AGG + contig297end:11384-11403 MsG0080048387.01.T01:intergenic 60.0%
GAGGCCAGGGTCCCTCTTTA+TGG - contig297end:14541-14560 MsG0080048387.01.T01:CDS 60.0%
GTGTCCAACCATCCAGCCGT+CGG + contig297end:14260-14279 MsG0080048387.01.T01:intergenic 60.0%
GTTGAGTGGTCCACCGGTGA+GGG + contig297end:11383-11402 MsG0080048387.01.T01:intergenic 60.0%
TGTCCAACCATCCAGCCGTC+GGG + contig297end:14259-14278 MsG0080048387.01.T01:intergenic 60.0%
!! ATTGAGAGTACCCCGACGGC+TGG - contig297end:14245-14264 MsG0080048387.01.T01:intron 60.0%
GTCCAACCATCCAGCCGTCG+GGG + contig297end:14258-14277 MsG0080048387.01.T01:intergenic 65.0%
TACCCCGACGGCTGGATGGT+TGG - contig297end:14253-14272 MsG0080048387.01.T01:intron 65.0%
! AGAGTACCCCGACGGCTGGA+TGG - contig297end:14249-14268 MsG0080048387.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
contig297end gene 10841 14796 10841 ID=MsG0080048387.01;Name=MsG0080048387.01
contig297end mRNA 10841 14796 10841 ID=MsG0080048387.01.T01;Parent=MsG0080048387.01;Name=MsG0080048387.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|1|1|3|0|261
contig297end exon 14419 14796 14419 ID=MsG0080048387.01.T01:exon:15740;Parent=MsG0080048387.01.T01
contig297end exon 11270 11395 11270 ID=MsG0080048387.01.T01:exon:15739;Parent=MsG0080048387.01.T01
contig297end exon 10841 11122 10841 ID=MsG0080048387.01.T01:exon:15738;Parent=MsG0080048387.01.T01
contig297end CDS 14419 14796 14419 ID=MsG0080048387.01.T01:cds;Parent=MsG0080048387.01.T01
contig297end CDS 11270 11395 11270 ID=MsG0080048387.01.T01:cds;Parent=MsG0080048387.01.T01
contig297end CDS 10841 11122 10841 ID=MsG0080048387.01.T01:cds;Parent=MsG0080048387.01.T01
Gene Sequence

>MsG0080048387.01.T01

ATGAGTGCACAAAATTTAATTGCTAGGAAGCATTATGTTCTTGTACATGGTGCTTGCCATGGTGCTTGGAGTTGGTACAAGGTCAAGCCACGTTTAGAATCTGCTGGTCATGTGGTCACAGTTCTTGACCTTTCAGCTTCTGGAACCAACTTGAAGAAACTTGAAGATGTTGATACAATTTCAGAATACTCTGAACCATTGTTGAAGCTAATGGCCACAATTCCACCAAATGAAAAGGTGATTCTTGTGGGTCATAGTCTTGGAGGACTTAGCATAGCTCTTGCAATGGAACAATTTCCAGAAAAGGTTGCTGTTGGTGTTTTCTTAACAGCTTTTATGCCGGACATTCAACACAATGCTTCTTATGTCATGGAAAAGTATATTGAGAGTACCCCGACGGCTGGATGGTTGGACACTGAATTCTGCCAGTGTGGAAACAAAACATCAATGTTCTTTGGTCCCAAATTCTTGTCCAATAAGCTCTATCAACACTCCTCCACTGAGGATCTTGAATTGGCCAAGACTTTATTGAGGCCAGGGTCCCTCTTTATGGAAGACTTGACTCAGCAAGATAACTTCTCTAAACAGGGTTATGGGTCAGTTCCACGTGCTTTTATTGTTTGCAATGAAGACCTTGGAATTCCATTGAAATTTCAACACTGGATGATCCAAAATGCTGGGATTAATGATGTATATGAGATCAAAGGGGCAGATCATATGGCTATGATTTGCAAGCCACAAGAACTATGTAATTCTCTCAATCAGATAGCTTTAAAATACTTGTGA
Protein sequence

>MsG0080048387.01.T01

MSAQNLIARKHYVLVHGACHGAWSWYKVKPRLESAGHVVTVLDLSASGTNLKKLEDVDTISEYSEPLLKLMATIPPNEKVILVGHSLGGLSIALAMEQFPEKVAVGVFLTAFMPDIQHNASYVMEKYIESTPTAGWLDTEFCQCGNKTSMFFGPKFLSNKLYQHSSTEDLELAKTLLRPGSLFMEDLTQQDNFSKQGYGSVPRAFIVCNEDLGIPLKFQHWMIQNAGINDVYEIKGADHMAMICKPQELCNSLNQIALKYL*