AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042124.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042124.01.T01 MTR_8g012320 98.148 702 9 1 1 698 1 702 0.0 1412
MsG0880042124.01.T01 MTR_4g006010 66.206 651 199 7 64 698 54 699 0.0 865
MsG0880042124.01.T01 MTR_3g109040 61.418 705 243 7 4 698 2 687 0.0 864
MsG0880042124.01.T01 MTR_3g109040 64.724 652 219 5 58 698 25 676 0.0 860
MsG0880042124.01.T01 MTR_3g103500 67.123 657 187 6 63 697 48 697 0.0 856
MsG0880042124.01.T01 MTR_6g007807 65.777 637 211 4 65 698 34 666 0.0 845
MsG0880042124.01.T01 MTR_3g103500 65.611 442 136 4 63 488 48 489 0.0 592
MsG0880042124.01.T01 MTR_1g061510 40.516 543 288 6 156 694 6 517 8.52e-139 417
MsG0880042124.01.T01 MTR_1g061340 39.925 531 280 6 171 694 19 517 2.91e-138 416
MsG0880042124.01.T01 MTR_1g061280 39.474 532 289 4 171 698 19 521 3.04e-138 416
MsG0880042124.01.T01 MTR_7g101950 41.620 531 278 6 171 697 25 527 3.53e-137 413
MsG0880042124.01.T01 MTR_1g492700 44.902 461 224 3 235 694 93 524 6.59e-137 413
MsG0880042124.01.T01 MTR_1g061270 41.210 529 275 8 171 694 19 516 2.14e-136 411
MsG0880042124.01.T01 MTR_7g103590 40.189 530 280 6 171 694 28 526 1.43e-135 409
MsG0880042124.01.T01 MTR_4g055520 38.983 531 304 3 171 697 28 542 3.98e-134 406
MsG0880042124.01.T01 MTR_4g055520 42.350 451 256 2 171 617 28 478 1.01e-130 396
MsG0880042124.01.T01 MTR_4g055520 41.333 450 247 2 249 697 29 462 1.13e-124 379
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042124.01.T01 AT3G07330 73.181 701 166 5 1 698 1 682 0.0 1043
MsG0880042124.01.T01 AT3G07330 73.181 701 166 5 1 698 1 682 0.0 1043
MsG0880042124.01.T01 AT2G24630 64.506 648 215 7 64 698 45 690 0.0 848
MsG0880042124.01.T01 AT2G24630 64.506 648 215 7 64 698 45 690 0.0 848
MsG0880042124.01.T01 AT4G31590 61.354 709 242 8 4 698 2 692 0.0 844
MsG0880042124.01.T01 AT3G28180 62.090 670 207 8 58 698 22 673 0.0 827
MsG0880042124.01.T01 AT4G07960 64.724 652 207 4 65 697 51 698 0.0 820
MsG0880042124.01.T01 AT4G07960 64.724 652 207 4 65 697 51 698 0.0 820
MsG0880042124.01.T01 AT5G22740 39.962 533 285 6 171 697 29 532 6.81e-136 410
MsG0880042124.01.T01 AT5G03760 41.098 528 278 4 174 697 32 530 1.90e-134 407
MsG0880042124.01.T01 AT4G13410 38.632 541 294 4 158 694 30 536 1.27e-133 405
MsG0880042124.01.T01 AT1G23480 44.543 449 244 2 162 605 42 490 4.71e-133 404
MsG0880042124.01.T01 AT1G23480 44.543 449 244 2 162 605 42 490 4.71e-133 404
MsG0880042124.01.T01 AT1G23480 46.445 422 217 3 189 605 1 418 1.07e-129 392
MsG0880042124.01.T01 AT1G24070 38.593 526 289 5 173 694 56 551 2.43e-129 394
MsG0880042124.01.T01 AT2G35650 43.929 453 245 4 157 604 40 488 2.46e-129 394
MsG0880042124.01.T01 AT5G16190 38.636 528 290 4 171 694 6 503 1.15e-128 390
MsG0880042124.01.T01 AT2G35650 49.326 371 187 1 235 604 46 416 2.45e-126 384
MsG0880042124.01.T01 AT2G35650 49.326 371 187 1 235 604 46 416 2.45e-126 384
MsG0880042124.01.T01 AT5G16190 43.379 438 244 2 171 604 6 443 1.18e-125 381
MsG0880042124.01.T01 AT5G16190 41.991 462 237 3 234 694 11 442 2.71e-125 380
MsG0880042124.01.T01 AT3G56000 38.318 535 284 7 175 697 26 526 1.68e-124 381
MsG0880042124.01.T01 AT5G16190 36.364 561 290 5 171 694 6 536 2.53e-121 373
MsG0880042124.01.T01 AT4G16590 37.807 529 259 9 171 694 56 519 1.90e-115 357
MsG0880042124.01.T01 AT1G23480 41.487 417 214 3 282 697 21 408 2.96e-109 337
MsG0880042124.01.T01 AT4G13410 40.686 408 207 3 288 694 2 375 3.65e-107 330
MsG0880042124.01.T01 AT2G35650 47.988 323 167 1 283 604 8 330 3.00e-105 326
MsG0880042124.01.T01 AT4G13410 44.311 334 183 1 158 488 30 363 1.04e-96 304
MsG0880042124.01.T01 AT1G24070 42.655 354 189 3 173 523 56 398 6.46e-95 300

Find 207 sgRNAs with CRISPR-Local

Find 438 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCGTCTTCGCGGCTTTAT+AGG 0.122188 8:+4096840 MsG0880042124.01.T01:CDS
AGAACTGTATATTGCTTTAT+AGG 0.167693 8:-4102562 MsG0880042125.01.T01:intron
AGAAGATAAGGCACTATAAA+TGG 0.168879 8:-4101819 MsG0880042125.01.T01:intron
TGATATTCGGGCAAATTATT+TGG 0.182039 8:+4097006 MsG0880042124.01.T01:CDS
CATTCTTGAAACTCGTAATT+TGG 0.189825 8:-4096503 None:intergenic
GTTATTGAGACACGGATTTC+TGG 0.231897 8:+4102707 MsG0880042124.01.T01:three_prime_UTR
GCAACTGATTTGCTGTAAAT+TGG 0.240412 8:-4102388 MsG0880042125.01.T01:intron
ATTGTGGTGGTTGGTTTGTT+AGG 0.242216 8:+4096881 MsG0880042124.01.T01:CDS
CGCGGCTTTATAGGGTGATT+AGG 0.248332 8:+4096849 MsG0880042124.01.T01:CDS
CGCCAGGTGGATTGATATTC+GGG 0.252239 8:+4096994 MsG0880042124.01.T01:CDS
GACACTTGAAGAAGGGTTTC+TGG 0.255151 8:+4102539 MsG0880042124.01.T01:three_prime_UTR
GGACTTGTTACCTTGAAATA+AGG 0.259806 8:-4098993 None:intergenic
CATAGATCTTCCTCAGATTC+AGG 0.261105 8:+4102011 MsG0880042124.01.T01:CDS
AAAGGAGAGAATGCTATAAT+TGG 0.268057 8:-4096324 None:intergenic
TAAGATGTTCTCAGTGGTTT+TGG 0.282366 8:+4102362 MsG0880042124.01.T01:three_prime_UTR
TCAAGGCAGAAGTGCATAAA+TGG 0.284235 8:+4098802 MsG0880042124.01.T01:CDS
ATCGTCTTCTTTAAGAAATC+TGG 0.286592 8:-4098969 None:intergenic
CTTCTGCCTTGATAAGGTTT+TGG 0.286898 8:-4098791 None:intergenic
GGTATCTTTATCGACTTCTT+TGG 0.290454 8:+4099870 MsG0880042124.01.T01:CDS
CAACAGCACCGCTGGCATTC+TGG 0.296682 8:+4100157 MsG0880042124.01.T01:CDS
TGGGTTGTTTGTTACATTCC+TGG 0.297643 8:+4101753 MsG0880042124.01.T01:CDS
ACGCCAGGTGGATTGATATT+CGG 0.300622 8:+4096993 MsG0880042124.01.T01:CDS
GGATCAAGTTTAGGAGGATT+AGG 0.325056 8:+4097119 MsG0880042124.01.T01:CDS
GATGGATTATCCTATGGTTT+TGG 0.331387 8:+4097186 MsG0880042124.01.T01:CDS
ATCGTCTTCGCGGCTTTATA+GGG 0.333413 8:+4096841 MsG0880042124.01.T01:CDS
GCGGCTTTATAGGGTGATTA+GGG 0.333735 8:+4096850 MsG0880042124.01.T01:CDS
AGCATTCTCTCCTTTCCCTT+TGG 0.339525 8:+4096332 MsG0880042124.01.T01:five_prime_UTR
TTACAAATGCCCACCTTGCC+TGG 0.343213 8:-4099770 None:intergenic
ATGGATTACTTTATCTTGTA+AGG 0.349410 8:+4096774 MsG0880042124.01.T01:CDS
TTTGTATCCGTTGATGTTAC+CGG 0.353552 8:+4096608 MsG0880042124.01.T01:CDS
ATCGACTTCTTTGGTTTCAA+TGG 0.355157 8:+4099879 MsG0880042124.01.T01:CDS
TGAAAACATGCTAACAATCT+TGG 0.356664 8:-4102736 MsG0880042125.01.T01:intron
TAAGGAAAGACAGTGGTAGA+TGG 0.356807 8:-4096166 None:intergenic
GCCAAACCTTAAACCTATCT+TGG 0.357047 8:+4102320 MsG0880042124.01.T01:three_prime_UTR
TATGTTCCAAGATAGGTTTA+AGG 0.358919 8:-4102326 MsG0880042125.01.T01:intron
TCCATTGACCATGTTCCTTC+CGG 0.362707 8:+4101713 MsG0880042124.01.T01:CDS
ATTCTATTTGTCAGGTTAGT+TGG 0.366439 8:+4101601 MsG0880042124.01.T01:intron
AGCAAACAGTACTGCAAATT+CGG 0.367355 8:-4102420 MsG0880042125.01.T01:intron
ACTGTTGGATTTATATCAAA+TGG 0.368340 8:+4096755 MsG0880042124.01.T01:CDS
AAATAAGTATGTTCCAAGAT+AGG 0.371858 8:-4102333 MsG0880042125.01.T01:intron
CAGGCTGGGAGCTCAGCTTC+CGG 0.372617 8:-4101732 MsG0880042125.01.T01:intron
GTTGTTGGTCTTGATTTGAT+TGG 0.373538 8:+4102212 MsG0880042124.01.T01:CDS
TTCTATTTGTCAGGTTAGTT+GGG 0.376306 8:+4101602 MsG0880042124.01.T01:intron
ATTGAAGGGAAGGGATGATT+TGG 0.384482 8:+4099740 MsG0880042124.01.T01:intron
TGTACAAGCATTCTCTCCTT+TGG 0.390072 8:-4098738 None:intergenic
AACTTACCCCTTGAAATAAT+AGG 0.392282 8:-4102184 MsG0880042125.01.T01:intron
TTCTACTTCCTATTATTTCA+AGG 0.392356 8:+4102176 MsG0880042124.01.T01:CDS
AGACTATTAGATCGCATTAG+AGG 0.393143 8:-4101987 MsG0880042125.01.T01:intron
TTGTGGTGGTTGGTTTGTTA+GGG 0.399936 8:+4096882 MsG0880042124.01.T01:CDS
GACAGTGGTAGATGGGAGAT+TGG 0.400500 8:-4096158 None:intergenic
TCCGTTGATGTTACCGGAGG+TGG 0.403192 8:+4096614 MsG0880042124.01.T01:CDS
AAGAGCGTGAACGAATAAAA+TGG 0.405345 8:-4101678 MsG0880042125.01.T01:intron
GAAGACGATACCTTATTTCA+AGG 0.414787 8:+4098983 MsG0880042124.01.T01:CDS
TGTTAAGGATTATGACTTTG+TGG 0.416744 8:+4098917 MsG0880042124.01.T01:CDS
TATGCACTTCTGCCTTGATA+AGG 0.420288 8:-4098797 None:intergenic
TTTGGTTTCAATGGAACTGC+TGG 0.420392 8:+4099888 MsG0880042124.01.T01:CDS
TTAAGAAATCTGGTGTTGGC+TGG 0.423624 8:-4098959 None:intergenic
TAACTGCTGCAATGGATTGA+TGG 0.423667 8:-4098701 None:intergenic
TCAATGGAACTGCTGGTGTC+TGG 0.424551 8:+4099895 MsG0880042124.01.T01:CDS
ATTAGATCGCATTAGAGGTT+CGG 0.426256 8:-4101982 MsG0880042125.01.T01:intron
CGGAAGCTGAGCTCCCAGCC+TGG 0.426639 8:+4101733 MsG0880042124.01.T01:CDS
TTCTCTCCTTTGGCCAATCC+AGG 0.431518 8:-4098728 None:intergenic
GGTTGGTTCTGCTGATGTGT+TGG 0.432216 8:+4096952 MsG0880042124.01.T01:CDS
CTTTGGAAGTTCTTACGAAT+GGG 0.432489 8:+4101899 MsG0880042124.01.T01:CDS
TCCAAGATAGGTTTAAGGTT+TGG 0.433090 8:-4102321 MsG0880042125.01.T01:intron
AAGGAAAGACAGTGGTAGAT+GGG 0.434573 8:-4096165 None:intergenic
TTCTGCTGATGTGTTGGGAT+TGG 0.439510 8:+4096958 MsG0880042124.01.T01:CDS
AAGTTTAATGCAATGATATC+CGG 0.439589 8:+4101867 MsG0880042124.01.T01:CDS
AATGGGAATGACCGTGGGGC+TGG 0.440805 8:-4101801 MsG0880042125.01.T01:intron
CCTCATTGATTCATGATAAA+CGG 0.441399 8:+4102289 MsG0880042124.01.T01:three_prime_UTR
TGGAGGGAATTGAGGTGTTA+AGG 0.443713 8:-4096184 None:intergenic
CAATTTATCGTTCCACTTCG+AGG 0.446447 8:+4099830 MsG0880042124.01.T01:CDS
TCTTGATTTGATTGGAGAGC+AGG 0.447596 8:+4102220 MsG0880042124.01.T01:CDS
GTGAGATACACGCGCTGCTT+TGG 0.448689 8:-4096231 None:intergenic
CAACAAATCGCTGCAACTGT+TGG 0.452670 8:+4096740 MsG0880042124.01.T01:CDS
GCTAGTGTGGATTATGATGA+TGG 0.454096 8:+4097148 MsG0880042124.01.T01:CDS
AAAGTTGTTTCAGTTCTGAA+TGG 0.457136 8:+4102505 MsG0880042124.01.T01:three_prime_UTR
ACCAGCCGCCACTCTCCTCT+AGG 0.460033 8:-4099929 None:intergenic
TGCTGGTGTCTGGAGAATAA+AGG 0.463477 8:+4099905 MsG0880042124.01.T01:CDS
GTTGGTTCTGCTGATGTGTT+GGG 0.466009 8:+4096953 MsG0880042124.01.T01:CDS
TTCTTTAAGAAATCTGGTGT+TGG 0.467471 8:-4098963 None:intergenic
ACTTCCAAAGCGAAATAATC+CGG 0.468385 8:-4101886 MsG0880042125.01.T01:intron
AATGGCAACAAAGGGGTGTT+CGG 0.468454 8:+4098820 MsG0880042124.01.T01:CDS
GAAGATAAGGCACTATAAAT+GGG 0.469507 8:-4101818 MsG0880042125.01.T01:intron
ACAGTGGTAGATGGGAGATT+GGG 0.472162 8:-4096157 None:intergenic
CATTGCAGCAGTTAGTATCC+TGG 0.472320 8:+4098710 MsG0880042124.01.T01:CDS
ACCGGAGGTGGAGGAGGATG+TGG 0.472346 8:+4096626 MsG0880042124.01.T01:CDS
TTATACGCCTCGTAAGTCTC+TGG 0.481256 8:-4100130 None:intergenic
TCCACATCCTCCTCCACCTC+CGG 0.482476 8:-4096627 None:intergenic
CACATACGAAACAATTGCAT+TGG 0.483298 8:-4100181 None:intergenic
AAAACCACTGAGAACATCTT+AGG 0.484602 8:-4102360 MsG0880042125.01.T01:intron
TGTACAAGTCCTTGATGATT+CGG 0.485266 8:+4098755 MsG0880042124.01.T01:CDS
TCATAATCCACACTAGCAAC+AGG 0.487551 8:-4097142 None:intergenic
GCTTTGGAAGTTCTTACGAA+TGG 0.487566 8:+4101898 MsG0880042124.01.T01:CDS
GAATGCTATAATTGGAAAGT+AGG 0.488518 8:-4096316 None:intergenic
GATTAGGCCTGTTGCTAGTG+TGG 0.488825 8:+4097135 MsG0880042124.01.T01:CDS
ATGTAACAAACAACCCAGGC+TGG 0.491766 8:-4101747 MsG0880042125.01.T01:intron
TCATTGTGCAGTCTGTGGAT+AGG 0.493055 8:+4097071 MsG0880042124.01.T01:CDS
CAGGATACTAACTGCTGCAA+TGG 0.493525 8:-4098709 None:intergenic
AGTGCATAAATGGCAACAAA+GGG 0.493869 8:+4098812 MsG0880042124.01.T01:CDS
AATGAGTTGTGATTATGTTA+AGG 0.495103 8:+4098902 MsG0880042124.01.T01:CDS
ATATCCGGATTATTTCGCTT+TGG 0.495428 8:+4101882 MsG0880042124.01.T01:CDS
AGATCTGGTTGCCTATGAAA+AGG 0.497710 8:+4101956 MsG0880042124.01.T01:CDS
TGTTGATGTACTTCGTTCAA+AGG 0.501646 8:+4100207 MsG0880042124.01.T01:CDS
GAAGTGCAAGACAGTTATCA+TGG 0.502564 8:+4096699 MsG0880042124.01.T01:CDS
TGATGACTTCACTTCAATCA+AGG 0.505655 8:-4096107 None:intergenic
GGAAGCTGAGCTCCCAGCCT+GGG 0.505831 8:+4101734 MsG0880042124.01.T01:CDS
GTAACATCAACGGATACAAA+TGG 0.506845 8:-4096605 None:intergenic
TCTACTTCCTATTATTTCAA+GGG 0.507497 8:+4102177 MsG0880042124.01.T01:CDS
AGAAGCTTACTTTCTGCTCA+AGG 0.508396 8:+4102146 MsG0880042124.01.T01:CDS
AGAGGAGGGTGGCGCGTGGA+GGG 0.509756 8:-4096200 None:intergenic
GTGTTCTCAAATAGAAGATA+AGG 0.510492 8:-4101831 MsG0880042125.01.T01:intron
CCACTTCGAGGTTGAACAGC+AGG 0.510911 8:+4099842 MsG0880042124.01.T01:CDS
GATGTTACCGGAGGTGGAGG+AGG 0.511941 8:+4096620 MsG0880042124.01.T01:CDS
GGATGATTTGGCATTAGTCC+AGG 0.519366 8:+4099752 MsG0880042124.01.T01:CDS
GATTCCTATGTGTAATGAAA+GGG 0.521686 8:+4097213 MsG0880042124.01.T01:CDS
TCCGGAAGGAACATGGTCAA+TGG 0.522315 8:-4101714 MsG0880042125.01.T01:intron
ACAGCAAATCAGTTGCTGCT+TGG 0.523373 8:+4102395 MsG0880042124.01.T01:three_prime_UTR
GCTGCTTTGGTGAGTAAAAG+AGG 0.525925 8:-4096218 None:intergenic
CAGCAGTTAGTATCCTGGAT+TGG 0.527759 8:+4098715 MsG0880042124.01.T01:CDS
TTTGTGTGATCCAAAGGGAA+AGG 0.529245 8:-4096342 None:intergenic
GTGGCGCGTGGAGGGAATTG+AGG 0.529511 8:-4096192 None:intergenic
TTCGTGCTCATCTCTGCGGA+TGG 0.530530 8:+4099988 MsG0880042124.01.T01:CDS
TTTGCCTGCCTGAACTGAAA+AGG 0.533100 8:+4102584 MsG0880042124.01.T01:three_prime_UTR
CTCAGCTTCCGGAAGGAACA+TGG 0.534805 8:-4101721 MsG0880042125.01.T01:intron
GAGTGTGATGGATTATCCTA+TGG 0.535824 8:+4097180 MsG0880042124.01.T01:CDS
AGATTCCTATGTGTAATGAA+AGG 0.539636 8:+4097212 MsG0880042124.01.T01:CDS
GCAGAATAAGCTTCCTCAGA+AGG 0.541637 8:-4101656 MsG0880042125.01.T01:intron
CCAGCCGCCACTCTCCTCTA+GGG 0.542535 8:-4099928 None:intergenic
AGATATCCAAAACCTTATCA+AGG 0.543821 8:+4098785 MsG0880042124.01.T01:CDS
GCGCTGATTCATCGTCTTCG+CGG 0.544577 8:+4096831 MsG0880042124.01.T01:CDS
TGATGTGTTGGGATTGGTTG+CGG 0.544995 8:+4096964 MsG0880042124.01.T01:CDS
AATGTGTCGACACTTGAAGA+AGG 0.545085 8:+4102531 MsG0880042124.01.T01:three_prime_UTR
AGCAACAACAACCGTTCAGA+TGG 0.546947 8:+4096653 MsG0880042124.01.T01:CDS
CCCTAGAGGAGAGTGGCGGC+TGG 0.547077 8:+4099928 MsG0880042124.01.T01:CDS
GTTGATGTTACCGGAGGTGG+AGG 0.548075 8:+4096617 MsG0880042124.01.T01:CDS
GAGGTTGAACAGCAGGTGAA+TGG 0.549131 8:+4099849 MsG0880042124.01.T01:CDS
CAAATTACGAGTTTCAAGAA+TGG 0.561308 8:+4096504 MsG0880042124.01.T01:CDS
AAGAGGAGGGTGGCGCGTGG+AGG 0.563150 8:-4096201 None:intergenic
AAGGTCATCAGAGACAGATC+TGG 0.566627 8:+4101941 MsG0880042124.01.T01:CDS
ATTACGAGTTTCAAGAATGG+TGG 0.566895 8:+4096507 MsG0880042124.01.T01:CDS
AGACATAGGCTTATACGTAC+AGG 0.568974 8:+4098852 MsG0880042124.01.T01:CDS
CTATAAATGGGAATGACCGT+GGG 0.571531 8:-4101806 MsG0880042125.01.T01:intron
GGAATCTGAACCAAAACCAT+AGG 0.571642 8:-4097196 None:intergenic
CTACTTCATCCGAATCATCA+AGG 0.572577 8:-4098764 None:intergenic
ACGAACAACTGTTGAGGACA+TGG 0.575504 8:+4099956 MsG0880042124.01.T01:CDS
GCTTATACGTACAGGATACA+AGG 0.578640 8:+4098860 MsG0880042124.01.T01:CDS
ACCTCCCTTTCATTACACAT+AGG 0.580816 8:-4097217 None:intergenic
CTTAGGATAGACATGACTCC+AGG 0.581702 8:-4101771 MsG0880042125.01.T01:intron
CTAGTGTGGATTATGATGAT+GGG 0.582989 8:+4097149 MsG0880042124.01.T01:CDS
ATACGTACAGGATACAAGGC+AGG 0.583627 8:+4098864 MsG0880042124.01.T01:CDS
CTCTTCAATACCTGAATCTG+AGG 0.585854 8:-4102021 MsG0880042125.01.T01:intron
ATGTGTCGACACTTGAAGAA+GGG 0.589751 8:+4102532 MsG0880042124.01.T01:three_prime_UTR
AAGTGCATAAATGGCAACAA+AGG 0.590116 8:+4098811 MsG0880042124.01.T01:CDS
AACTTATAAAGCATATGACT+TGG 0.590845 8:-4102477 MsG0880042125.01.T01:intron
TGTAACAAACAACCCAGGCT+GGG 0.590964 8:-4101746 MsG0880042125.01.T01:intron
CTGGGAGCTCAGCTTCCGGA+AGG 0.591836 8:-4101728 MsG0880042125.01.T01:intron
CCTGCTGTTCAACCTCGAAG+TGG 0.594990 8:-4099842 None:intergenic
TCCACCTCCGGTAACATCAA+CGG 0.595119 8:-4096615 None:intergenic
TTGTATTTGTTATTGAGACA+CGG 0.595573 8:+4102699 MsG0880042124.01.T01:three_prime_UTR
CTACTTCCTATTATTTCAAG+GGG 0.597338 8:+4102178 MsG0880042124.01.T01:CDS
GGAGGTGGAGGAGGATGTGG+AGG 0.598881 8:+4096629 MsG0880042124.01.T01:CDS
TGGAAGTTCTTACGAATGGG+TGG 0.600212 8:+4101902 MsG0880042124.01.T01:CDS
GGCATTAGTCCAGGCAAGGT+GGG 0.601187 8:+4099761 MsG0880042124.01.T01:CDS
TTCGTCAAACTCTGCAAAGG+CGG 0.602112 8:-4097031 None:intergenic
AACAACAACAAATGAAACAA+AGG 0.605050 8:-4096458 None:intergenic
TCCTATGTGTAATGAAAGGG+AGG 0.605841 8:+4097216 MsG0880042124.01.T01:CDS
GCCTGCCTGAACTGAAAAGG+TGG 0.608755 8:+4102587 MsG0880042124.01.T01:three_prime_UTR
ATTTGGCATTAGTCCAGGCA+AGG 0.610560 8:+4099757 MsG0880042124.01.T01:CDS
TGCCCGAATATCAATCCACC+TGG 0.611106 8:-4096996 None:intergenic
TTCGGATCATATATAGACAT+AGG 0.611176 8:+4098838 MsG0880042124.01.T01:CDS
ACTATAAATGGGAATGACCG+TGG 0.616670 8:-4101807 MsG0880042125.01.T01:intron
TCAGCAGAACCAACCGAAGG+CGG 0.622287 8:-4096944 None:intergenic
AAGTGCAAGACAGTTATCAT+GGG 0.623926 8:+4096700 MsG0880042124.01.T01:CDS
AAGGTGGGCATTTGTAAACA+AGG 0.624666 8:+4099776 MsG0880042124.01.T01:CDS
CTGGAGAATAAAGGCCCTAG+AGG 0.626735 8:+4099914 MsG0880042124.01.T01:CDS
TAGTATCCTGGATTGGCCAA+AGG 0.628007 8:+4098722 MsG0880042124.01.T01:CDS
TGGCATTAGTCCAGGCAAGG+TGG 0.635723 8:+4099760 MsG0880042124.01.T01:CDS
TGGGAGTGTTGAGAGTGTGA+TGG 0.639622 8:+4097168 MsG0880042124.01.T01:CDS
GTGGGGCTGGAAGAACACTT+AGG 0.639853 8:-4101788 MsG0880042125.01.T01:intron
TAAGTGTTCTTCCAGCCCCA+CGG 0.640158 8:+4101790 MsG0880042124.01.T01:CDS
CCGTTTATCATGAATCAATG+AGG 0.640950 8:-4102289 MsG0880042125.01.T01:intron
TAAAAGAGGAGGGTGGCGCG+TGG 0.641280 8:-4096204 None:intergenic
TGAATCAATGAGGATCTGAA+AGG 0.643970 8:-4102279 MsG0880042125.01.T01:intron
ATCAATGAGGATCTGAAAGG+AGG 0.649243 8:-4102276 MsG0880042125.01.T01:intron
TGAGCCTAAGATGTTCTCAG+TGG 0.656236 8:+4102356 MsG0880042124.01.T01:three_prime_UTR
AGAAAGTAAGCTTCTAACCG+AGG 0.657953 8:-4102138 MsG0880042125.01.T01:intron
ATATTCGTCAAACTCTGCAA+AGG 0.658108 8:-4097034 None:intergenic
ACATCAGCAGAACCAACCGA+AGG 0.659014 8:-4096947 None:intergenic
ATAAAGGCCCTAGAGGAGAG+TGG 0.659042 8:+4099921 MsG0880042124.01.T01:CDS
TACGTACAGGATACAAGGCA+GGG 0.659380 8:+4098865 MsG0880042124.01.T01:CDS
GTTAGAACGAACAACTGTTG+AGG 0.664120 8:+4099950 MsG0880042124.01.T01:CDS
GTATCCGTTGATGTTACCGG+AGG 0.666454 8:+4096611 MsG0880042124.01.T01:CDS
GCTGTTCGTGCTCATCTCTG+CGG 0.669570 8:+4099984 MsG0880042124.01.T01:CDS
TTCATGATAAACGGTCACAA+TGG 0.670605 8:+4102298 MsG0880042124.01.T01:three_prime_UTR
GAGGTGTTAAGGAAAGACAG+TGG 0.677744 8:-4096173 None:intergenic
CTTTGGTGAGTAAAAGAGGA+GGG 0.678756 8:-4096214 None:intergenic
GCTTTGGTGAGTAAAAGAGG+AGG 0.687305 8:-4096215 None:intergenic
GCATTGGACCAGAATGCCAG+CGG 0.701429 8:-4100165 None:intergenic
GTGCATAAATGGCAACAAAG+GGG 0.706412 8:+4098813 MsG0880042124.01.T01:CDS
TGGTGAGTAAAAGAGGAGGG+TGG 0.715491 8:-4096211 None:intergenic
AAGGCCCTAGAGGAGAGTGG+CGG 0.718388 8:+4099924 MsG0880042124.01.T01:CDS
TATAAATGGGAATGACCGTG+GGG 0.731407 8:-4101805 MsG0880042125.01.T01:intron
AGGAATGTAACAAACAACCC+AGG 0.737741 8:-4101751 MsG0880042125.01.T01:intron
TGAGCTTCCAGAGACTTACG+AGG 0.750157 8:+4100123 MsG0880042124.01.T01:CDS
AAGTCTCTGGAAGCTCACAG+AGG 0.767051 8:-4100117 None:intergenic
ATGACTTGGCAACAACAACG+AGG 0.769623 8:-4102463 MsG0880042125.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAGATAAGAAAAATAA+AGG - Chr8:4101183-4101202 MsG0880042125.01.T01:intron 10.0%
!! TTACAAAAAATAAAAGAAAA+GGG + Chr8:4101318-4101337 MsG0880042124.01.T01:intron 10.0%
!! TTTACAAAAAATAAAAGAAA+AGG + Chr8:4101317-4101336 MsG0880042124.01.T01:intron 10.0%
!! AATAAATTTAGTTATATGTC+AGG + Chr8:4100868-4100887 MsG0880042124.01.T01:intron 15.0%
!! ACAAAAAAATGTGTTTAAAA+AGG - Chr8:4097265-4097284 None:intergenic 15.0%
!! ATAAATTAAAGTTGAGATTA+GGG + Chr8:4099119-4099138 MsG0880042124.01.T01:intron 15.0%
!! TATAAATTAAAGTTGAGATT+AGG + Chr8:4099118-4099137 MsG0880042124.01.T01:intron 15.0%
!! TATTATAAATTCTCAATTGA+GGG - Chr8:4099153-4099172 None:intergenic 15.0%
!!! AATCTCAACTTTAATTTATA+AGG - Chr8:4099118-4099137 None:intergenic 15.0%
!!! ACATTTTTTTGTTTAAATGT+TGG + Chr8:4097273-4097292 MsG0880042124.01.T01:intron 15.0%
!!! ATTTCTTTCATTTTTCAAAA+TGG - Chr8:4099596-4099615 None:intergenic 15.0%
!!! TTATATTTGTATGAAACTTT+TGG + Chr8:4101430-4101449 MsG0880042124.01.T01:intron 15.0%
!! AACAAAAATTTCATAGTTGT+TGG - Chr8:4100960-4100979 MsG0880042125.01.T01:intron 20.0%
!! ATAGCAAAAATAACAGAATA+AGG - Chr8:4100304-4100323 None:intergenic 20.0%
!! CTATTATAAATTCTCAATTG+AGG - Chr8:4099154-4099173 None:intergenic 20.0%
!! TACTTTCAACTTTGAATTTA+TGG - Chr8:4099017-4099036 None:intergenic 20.0%
!! TAGAGTAAAACAAGAAAATT+TGG - Chr8:4099720-4099739 None:intergenic 20.0%
!!! AAATAATTTGACTTCTAGAA+AGG + Chr8:4101551-4101570 MsG0880042124.01.T01:intron 20.0%
!!! AAGTTACATGAATATTTTCT+TGG + Chr8:4100595-4100614 MsG0880042124.01.T01:intron 20.0%
!!! CTTTTCTATATTAGTATTGT+CGG + Chr8:4098341-4098360 MsG0880042124.01.T01:intron 20.0%
!!! GAGATCTTTGTTTTTTTTTT+TGG - Chr8:4096395-4096414 None:intergenic 20.0%
!!! TAATGAAAACAAGATTTTGT+AGG - Chr8:4098241-4098260 None:intergenic 20.0%
!!! TATTTTTCTCAATGATGTTA+AGG + Chr8:4100016-4100035 MsG0880042124.01.T01:CDS 20.0%
!!! TTACAAACTTTGTTTTGAAT+GGG - Chr8:4099511-4099530 None:intergenic 20.0%
! AAATAAGTATGTTCCAAGAT+AGG - Chr8:4102336-4102355 MsG0880042125.01.T01:intron 25.0%
! AAATAATGTTCTATGAAGTG+GGG - Chr8:4098604-4098623 None:intergenic 25.0%
! AAATTCAAAGAACACTGAAT+TGG - Chr8:4099416-4099435 None:intergenic 25.0%
! AACAAAACAACCTAAAAACT+TGG + Chr8:4096291-4096310 MsG0880042124.01.T01:five_prime_UTR 25.0%
! AACAACAACAAATGAAACAA+AGG - Chr8:4096461-4096480 None:intergenic 25.0%
! AACATCTGAATCTAACAATT+AGG - Chr8:4101257-4101276 MsG0880042125.01.T01:intron 25.0%
! AACTTATAAAGCATATGACT+TGG - Chr8:4102480-4102499 MsG0880042125.01.T01:intron 25.0%
! AAGTTTAATGCAATGATATC+CGG + Chr8:4101867-4101886 MsG0880042124.01.T01:CDS 25.0%
! AATGAGTTGTGATTATGTTA+AGG + Chr8:4098902-4098921 MsG0880042124.01.T01:CDS 25.0%
! AATGTGTTTAAAAAGGACTA+AGG - Chr8:4097258-4097277 None:intergenic 25.0%
! ACATTCAGATTTGTATAAGA+AGG + Chr8:4100533-4100552 MsG0880042124.01.T01:intron 25.0%
! ACTGTTGGATTTATATCAAA+TGG + Chr8:4096755-4096774 MsG0880042124.01.T01:CDS 25.0%
! AGAACTGTATATTGCTTTAT+AGG - Chr8:4102565-4102584 MsG0880042125.01.T01:intron 25.0%
! ATGATTGAATTCTATTTGTC+AGG + Chr8:4101593-4101612 MsG0880042124.01.T01:intron 25.0%
! ATGCTAATAATAATCACAAC+AGG - Chr8:4100486-4100505 None:intergenic 25.0%
! CAAAACAAAGTTTGTAACAT+TGG + Chr8:4099514-4099533 MsG0880042124.01.T01:intron 25.0%
! GAAATAATGTTCTATGAAGT+GGG - Chr8:4098605-4098624 None:intergenic 25.0%
! GATACAATATTTAGTACACA+TGG - Chr8:4097595-4097614 None:intergenic 25.0%
! GATTCATGTAATTTAGATGT+TGG + Chr8:4097716-4097735 MsG0880042124.01.T01:intron 25.0%
! GTGTACTAAATATTGTATCA+CGG + Chr8:4097596-4097615 MsG0880042124.01.T01:intron 25.0%
! TACGTCTCAAATTACATTAA+CGG + Chr8:4101067-4101086 MsG0880042124.01.T01:intron 25.0%
! TCTACTTCCTATTATTTCAA+GGG + Chr8:4102177-4102196 MsG0880042124.01.T01:CDS 25.0%
! TGAAATAATGTTCTATGAAG+TGG - Chr8:4098606-4098625 None:intergenic 25.0%
! TTAATTACACAATCATTCAG+AGG + Chr8:4099443-4099462 MsG0880042124.01.T01:intron 25.0%
! TTCTACTTCCTATTATTTCA+AGG + Chr8:4102176-4102195 MsG0880042124.01.T01:CDS 25.0%
!! AAGAAATTTTCCACTATTTC+TGG + Chr8:4099609-4099628 MsG0880042124.01.T01:intron 25.0%
!! AGTTGAATTCTTTTGAATCT+AGG + Chr8:4100263-4100282 MsG0880042124.01.T01:intron 25.0%
!! ATGGATTACTTTATCTTGTA+AGG + Chr8:4096774-4096793 MsG0880042124.01.T01:CDS 25.0%
!! TAGGCTCTTAACATTTTATA+GGG + Chr8:4097425-4097444 MsG0880042124.01.T01:intron 25.0%
!! TTAGGCTCTTAACATTTTAT+AGG + Chr8:4097424-4097443 MsG0880042124.01.T01:intron 25.0%
!!! AGAAATTTTCCACTATTTCT+GGG + Chr8:4099610-4099629 MsG0880042124.01.T01:intron 25.0%
!!! ATAGGATTGTTTTGATTTTG+GGG + Chr8:4097089-4097108 MsG0880042124.01.T01:CDS 25.0%
!!! ATTTATTTTGTTAACTGCCT+CGG + Chr8:4102121-4102140 MsG0880042124.01.T01:CDS 25.0%
!!! CTCATTTTCTGTCTTTAAAA+TGG - Chr8:4097998-4098017 None:intergenic 25.0%
!!! CTGACTTTAAAATACTTACA+GGG - Chr8:4100363-4100382 None:intergenic 25.0%
!!! CTTGTTTTACTCTAATTGAA+GGG + Chr8:4099726-4099745 MsG0880042124.01.T01:intron 25.0%
!!! GAGTTGATTGCATATTTTAA+AGG + Chr8:4096908-4096927 MsG0880042124.01.T01:CDS 25.0%
!!! GATAGGATTGTTTTGATTTT+GGG + Chr8:4097088-4097107 MsG0880042124.01.T01:CDS 25.0%
!!! GTTACAAACTTTGTTTTGAA+TGG - Chr8:4099512-4099531 None:intergenic 25.0%
!!! TATAAAGTGTTGTCAAATTG+CGG + Chr8:4098411-4098430 MsG0880042124.01.T01:intron 25.0%
!!! TCTGACTTTAAAATACTTAC+AGG - Chr8:4100364-4100383 None:intergenic 25.0%
!!! TCTTGTTTTACTCTAATTGA+AGG + Chr8:4099725-4099744 MsG0880042124.01.T01:intron 25.0%
!!! TGGTACTACTGATTTATATA+TGG + Chr8:4097293-4097312 MsG0880042124.01.T01:intron 25.0%
!!! TTGTATTTGTTATTGAGACA+CGG + Chr8:4102699-4102718 MsG0880042124.01.T01:three_prime_UTR 25.0%
!!! TTGTTATTCATCCATTTTTG+TGG + Chr8:4102759-4102778 MsG0880042124.01.T01:three_prime_UTR 25.0%
!!! TTTTAACCTCCATTTTTTTC+CGG - Chr8:4100929-4100948 MsG0880042125.01.T01:intron 25.0%
!!! TTTTTTTTGTGTGATCCAAA+GGG - Chr8:4096350-4096369 None:intergenic 25.0%
!!! TTTTTTTTTGTGTGATCCAA+AGG - Chr8:4096351-4096370 None:intergenic 25.0%
AAAGGAGAGAATGCTATAAT+TGG - Chr8:4096327-4096346 None:intergenic 30.0%
AACTTACCCCTTGAAATAAT+AGG - Chr8:4102187-4102206 MsG0880042125.01.T01:intron 30.0%
AGACAGAATAAATGTACAAG+TGG + Chr8:4098156-4098175 MsG0880042124.01.T01:intron 30.0%
AGAGGAGAAAATTATAGAGT+TGG - Chr8:4098311-4098330 None:intergenic 30.0%
AGATATCCAAAACCTTATCA+AGG + Chr8:4098785-4098804 MsG0880042124.01.T01:CDS 30.0%
AGATTCCTATGTGTAATGAA+AGG + Chr8:4097212-4097231 MsG0880042124.01.T01:CDS 30.0%
AGTCACTTACTAAAATACAC+AGG + Chr8:4100450-4100469 MsG0880042124.01.T01:intron 30.0%
ATATTGTATCACGGAACAAT+AGG + Chr8:4097605-4097624 MsG0880042124.01.T01:intron 30.0%
ATTAAAGTTGAGATTAGGGA+AGG + Chr8:4099123-4099142 MsG0880042124.01.T01:intron 30.0%
ATTAATGAAAACGCATGGAA+GGG + Chr8:4101029-4101048 MsG0880042124.01.T01:intron 30.0%
ATTACATTAACGGAGCAATT+AGG + Chr8:4101077-4101096 MsG0880042124.01.T01:intron 30.0%
ATTCTATTTGTCAGGTTAGT+TGG + Chr8:4101601-4101620 MsG0880042124.01.T01:intron 30.0%
CAAATTACGAGTTTCAAGAA+TGG + Chr8:4096504-4096523 MsG0880042124.01.T01:CDS 30.0%
CATACAATGAATGAAGTATG+TGG - Chr8:4101502-4101521 MsG0880042125.01.T01:intron 30.0%
CATTCTTGAAACTCGTAATT+TGG - Chr8:4096506-4096525 None:intergenic 30.0%
CTACTTCCTATTATTTCAAG+GGG + Chr8:4102178-4102197 MsG0880042124.01.T01:CDS 30.0%
GAATGCTATAATTGGAAAGT+AGG - Chr8:4096319-4096338 None:intergenic 30.0%
GATTCCTATGTGTAATGAAA+GGG + Chr8:4097213-4097232 MsG0880042124.01.T01:CDS 30.0%
GTGAATTACACTATCAACTA+AGG - Chr8:4099637-4099656 None:intergenic 30.0%
GTGCTATATTTCAAATCTTG+AGG + Chr8:4100040-4100059 MsG0880042124.01.T01:intron 30.0%
GTGGTAAGTAGTATTTACAT+GGG + Chr8:4097738-4097757 MsG0880042124.01.T01:intron 30.0%
GTGTTCTCAAATAGAAGATA+AGG - Chr8:4101834-4101853 MsG0880042125.01.T01:intron 30.0%
TAAAAAACAAACGACACAGA+TGG - Chr8:4099227-4099246 None:intergenic 30.0%
TAAGTTATTAACCCTTCATC+AGG - Chr8:4100670-4100689 None:intergenic 30.0%
TACACATGGTTATCAAATAG+CGG - Chr8:4097581-4097600 None:intergenic 30.0%
TAGAAAAGAGACAAGAATAG+AGG - Chr8:4098329-4098348 None:intergenic 30.0%
TATATTAGTATTGTCGGTAG+TGG + Chr8:4098347-4098366 MsG0880042124.01.T01:intron 30.0%
TATGTTCCAAGATAGGTTTA+AGG - Chr8:4102329-4102348 MsG0880042125.01.T01:intron 30.0%
TATTGTATCACGGAACAATA+GGG + Chr8:4097606-4097625 MsG0880042124.01.T01:intron 30.0%
TCATGTAATTTAGATGTTGG+TGG + Chr8:4097719-4097738 MsG0880042124.01.T01:intron 30.0%
TGAAAACATGCTAACAATCT+TGG - Chr8:4102739-4102758 MsG0880042125.01.T01:intron 30.0%
TGATATTCGGGCAAATTATT+TGG + Chr8:4097006-4097025 MsG0880042124.01.T01:CDS 30.0%
TGGTAAGTAGTATTTACATG+GGG + Chr8:4097739-4097758 MsG0880042124.01.T01:intron 30.0%
TGGTTACAAAAAAACTAGGA+AGG + Chr8:4101922-4101941 MsG0880042124.01.T01:CDS 30.0%
TGTTAAGGATTATGACTTTG+TGG + Chr8:4098917-4098936 MsG0880042124.01.T01:CDS 30.0%
TTCAATTTCCCGGAAAAAAA+TGG + Chr8:4100917-4100936 MsG0880042124.01.T01:intron 30.0%
TTCGGATCATATATAGACAT+AGG + Chr8:4098838-4098857 MsG0880042124.01.T01:CDS 30.0%
TTTACTCTAATTGAAGGGAA+GGG + Chr8:4099731-4099750 MsG0880042124.01.T01:intron 30.0%
! AAAGTAGGAACCAAGTTTTT+AGG - Chr8:4096304-4096323 None:intergenic 30.0%
! AGAAGATAAGGCACTATAAA+TGG - Chr8:4101822-4101841 MsG0880042125.01.T01:intron 30.0%
! AGGCTCTTAACATTTTATAG+GGG + Chr8:4097426-4097445 MsG0880042124.01.T01:intron 30.0%
! ATCGTCTTCTTTAAGAAATC+TGG - Chr8:4098972-4098991 None:intergenic 30.0%
! CAAGTATTGTTGTGATTGAA+AGG + Chr8:4098517-4098536 MsG0880042124.01.T01:intron 30.0%
! GAAGATAAGGCACTATAAAT+GGG - Chr8:4101821-4101840 MsG0880042125.01.T01:intron 30.0%
! GTAGTATGTTTTCAATTTCC+CGG + Chr8:4100907-4100926 MsG0880042124.01.T01:intron 30.0%
! GTTTTTGTGATTCATGCTTT+AGG + Chr8:4097406-4097425 MsG0880042124.01.T01:intron 30.0%
! TGTCTTTCAACACCAATTTT+TGG + Chr8:4100399-4100418 MsG0880042124.01.T01:intron 30.0%
! TTCTATTTGTCAGGTTAGTT+GGG + Chr8:4101602-4101621 MsG0880042124.01.T01:intron 30.0%
! TTCTTTAAGAAATCTGGTGT+TGG - Chr8:4098966-4098985 None:intergenic 30.0%
! TTGATAACAAATTGAACAGC+AGG - Chr8:4100796-4100815 MsG0880042125.01.T01:intron 30.0%
! TTTGTGAACTGTGCAATTTT+TGG + Chr8:4100979-4100998 MsG0880042124.01.T01:intron 30.0%
! TTTTACTCTAATTGAAGGGA+AGG + Chr8:4099730-4099749 MsG0880042124.01.T01:intron 30.0%
!! AAAGTTGTTTCAGTTCTGAA+TGG + Chr8:4102505-4102524 MsG0880042124.01.T01:three_prime_UTR 30.0%
!! ATTTTAAAGGCTGGCATTTT+AGG + Chr8:4096921-4096940 MsG0880042124.01.T01:CDS 30.0%
!! CCTCATTGATTCATGATAAA+CGG + Chr8:4102289-4102308 MsG0880042124.01.T01:three_prime_UTR 30.0%
!! GATTAGGGTGTTTTTAATTG+TGG + Chr8:4096865-4096884 MsG0880042124.01.T01:CDS 30.0%
!! TCACAATGTTCTCTAGAATA+AGG + Chr8:4101284-4101303 MsG0880042124.01.T01:intron 30.0%
!! TGATTGCATATTTTAAAGGC+TGG + Chr8:4096912-4096931 MsG0880042124.01.T01:CDS 30.0%
!!! AGGTTGTTTTGTTTCTTCTT+TGG - Chr8:4096284-4096303 None:intergenic 30.0%
!!! GGATAGGATTGTTTTGATTT+TGG + Chr8:4097087-4097106 MsG0880042124.01.T01:CDS 30.0%
!!! GTGTGTCTGTTTTTTTACAA+GGG - Chr8:4096262-4096281 None:intergenic 30.0%
!!! TTGTGGTTGTTTTAAAGAGT+AGG + Chr8:4098044-4098063 MsG0880042124.01.T01:intron 30.0%
!!! TTTAACCTCCATTTTTTTCC+GGG - Chr8:4100928-4100947 MsG0880042125.01.T01:intron 30.0%
!!! TTTTGATTTTGGGGTGTTTT+TGG + Chr8:4097098-4097117 MsG0880042124.01.T01:CDS 30.0%
AAAACCACTGAGAACATCTT+AGG - Chr8:4102363-4102382 MsG0880042125.01.T01:intron 35.0%
AAAATCAATGCTGTCAACCA+CGG - Chr8:4098489-4098508 None:intergenic 35.0%
AAAATGAGAGAACATTGCTG+TGG + Chr8:4098010-4098029 MsG0880042124.01.T01:intron 35.0%
AAGGCATATGAGCATTTCAA+TGG - Chr8:4101456-4101475 MsG0880042125.01.T01:intron 35.0%
AAGTGCAAGACAGTTATCAT+GGG + Chr8:4096700-4096719 MsG0880042124.01.T01:CDS 35.0%
AAGTGCATAAATGGCAACAA+AGG + Chr8:4098811-4098830 MsG0880042124.01.T01:CDS 35.0%
AATCTTGTGCTAGAGTAGAA+GGG + Chr8:4097466-4097485 MsG0880042124.01.T01:intron 35.0%
AATTTCCCGGAAAAAAATGG+AGG + Chr8:4100920-4100939 MsG0880042124.01.T01:intron 35.0%
ACGTTGCAGTTTATAATCCT+TGG - Chr8:4099660-4099679 None:intergenic 35.0%
ACTTATTAGTGACCTGATGA+AGG + Chr8:4100655-4100674 MsG0880042124.01.T01:intron 35.0%
ACTTCCAAAGCGAAATAATC+CGG - Chr8:4101889-4101908 MsG0880042125.01.T01:intron 35.0%
AGACTATTAGATCGCATTAG+AGG - Chr8:4101990-4102009 MsG0880042125.01.T01:intron 35.0%
AGAGTTGGCATGAAACAAAA+GGG - Chr8:4098296-4098315 None:intergenic 35.0%
AGCAAACAGTACTGCAAATT+CGG - Chr8:4102423-4102442 MsG0880042125.01.T01:intron 35.0%
AGTGCATAAATGGCAACAAA+GGG + Chr8:4098812-4098831 MsG0880042124.01.T01:CDS 35.0%
ATACCGTGTAAGCATATACA+AGG - Chr8:4101475-4101494 MsG0880042125.01.T01:intron 35.0%
ATATCCGGATTATTTCGCTT+TGG + Chr8:4101882-4101901 MsG0880042124.01.T01:CDS 35.0%
ATATTCGTCAAACTCTGCAA+AGG - Chr8:4097037-4097056 None:intergenic 35.0%
ATGCCTTGTATATGCTTACA+CGG + Chr8:4101469-4101488 MsG0880042124.01.T01:intron 35.0%
ATTACGAGTTTCAAGAATGG+TGG + Chr8:4096507-4096526 MsG0880042124.01.T01:CDS 35.0%
ATTAGATCGCATTAGAGGTT+CGG - Chr8:4101985-4102004 MsG0880042125.01.T01:intron 35.0%
CAAATCTTGCCACCAAAAAT+TGG - Chr8:4100414-4100433 None:intergenic 35.0%
CACATACGAAACAATTGCAT+TGG - Chr8:4100184-4100203 None:intergenic 35.0%
CATTAATGAAAACGCATGGA+AGG + Chr8:4101028-4101047 MsG0880042124.01.T01:intron 35.0%
CATTCATTGTATGCAATGCT+TGG + Chr8:4101509-4101528 MsG0880042124.01.T01:intron 35.0%
CCGTTTATCATGAATCAATG+AGG - Chr8:4102292-4102311 MsG0880042125.01.T01:intron 35.0%
CGTTGCAGTTTATAATCCTT+GGG - Chr8:4099659-4099678 None:intergenic 35.0%
CTTATTAGTGACCTGATGAA+GGG + Chr8:4100656-4100675 MsG0880042124.01.T01:intron 35.0%
GATTCCCAAAATTCTGCAAT+TGG - Chr8:4099194-4099213 None:intergenic 35.0%
GGTGGTAAGTAGTATTTACA+TGG + Chr8:4097737-4097756 MsG0880042124.01.T01:intron 35.0%
GTAACATCAACGGATACAAA+TGG - Chr8:4096608-4096627 None:intergenic 35.0%
GTCAGGCAAGACAATATTAT+AGG + Chr8:4100885-4100904 MsG0880042124.01.T01:intron 35.0%
TAGAGTTGGCATGAAACAAA+AGG - Chr8:4098297-4098316 None:intergenic 35.0%
TCTAAACTGTTGTGGAATAG+TGG + Chr8:4101141-4101160 MsG0880042124.01.T01:intron 35.0%
TGAATCAATGAGGATCTGAA+AGG - Chr8:4102282-4102301 MsG0880042125.01.T01:intron 35.0%
TGAGTCACTTATGTAACTTG+AGG - Chr8:4099573-4099592 None:intergenic 35.0%
TGATGACTTCACTTCAATCA+AGG - Chr8:4096110-4096129 None:intergenic 35.0%
TGCAGAATCTTCACATACTT+CGG + Chr8:4099320-4099339 MsG0880042124.01.T01:intron 35.0%
TGGGTGGTTACAAAAAAACT+AGG + Chr8:4101918-4101937 MsG0880042124.01.T01:CDS 35.0%
TGTTGATGTACTTCGTTCAA+AGG + Chr8:4100207-4100226 MsG0880042124.01.T01:CDS 35.0%
TTAATGAAAACGCATGGAAG+GGG + Chr8:4101030-4101049 MsG0880042124.01.T01:intron 35.0%
TTCATGATAAACGGTCACAA+TGG + Chr8:4102298-4102317 MsG0880042124.01.T01:three_prime_UTR 35.0%
TTGCAGATGGGAAAATGAAA+GGG + Chr8:4097882-4097901 MsG0880042124.01.T01:intron 35.0%
TTTGTATCCGTTGATGTTAC+CGG + Chr8:4096608-4096627 MsG0880042124.01.T01:CDS 35.0%
! AAGAGCGTGAACGAATAAAA+TGG - Chr8:4101681-4101700 MsG0880042125.01.T01:intron 35.0%
! AAGTATTCTGATGAAAGCAC+AGG - Chr8:4098083-4098102 None:intergenic 35.0%
! ACCTACCAATTGCAGAATTT+TGG + Chr8:4099186-4099205 MsG0880042124.01.T01:intron 35.0%
! ATCGACTTCTTTGGTTTCAA+TGG + Chr8:4099879-4099898 MsG0880042124.01.T01:CDS 35.0%
! CATGCGTTTTCATTAATGCA+GGG - Chr8:4101026-4101045 MsG0880042125.01.T01:intron 35.0%
! CCTACCAATTGCAGAATTTT+GGG + Chr8:4099187-4099206 MsG0880042124.01.T01:intron 35.0%
! CTAGTGTGGATTATGATGAT+GGG + Chr8:4097149-4097168 MsG0880042124.01.T01:CDS 35.0%
! CTTTGGAAGTTCTTACGAAT+GGG + Chr8:4101899-4101918 MsG0880042124.01.T01:CDS 35.0%
! GAAGACGATACCTTATTTCA+AGG + Chr8:4098983-4099002 MsG0880042124.01.T01:CDS 35.0%
! GTTTTGCATCCACTAAAAGT+TGG - Chr8:4102257-4102276 MsG0880042125.01.T01:intron 35.0%
! TAAGATGTTCTCAGTGGTTT+TGG + Chr8:4102362-4102381 MsG0880042124.01.T01:three_prime_UTR 35.0%
! TCCAAGATAGGTTTAAGGTT+TGG - Chr8:4102324-4102343 MsG0880042125.01.T01:intron 35.0%
! TCTTTCTTTTCTTCCTTCTG+AGG + Chr8:4101643-4101662 MsG0880042124.01.T01:CDS 35.0%
! TGTACAAGTCCTTGATGATT+CGG + Chr8:4098755-4098774 MsG0880042124.01.T01:CDS 35.0%
! TTGTCGTTGATTACTTCATG+CGG - Chr8:4101359-4101378 MsG0880042125.01.T01:intron 35.0%
! TTTTCACAGATCCATCTGAA+CGG - Chr8:4096667-4096686 None:intergenic 35.0%
! TTTTCTCGCTGTTGTACAAT+AGG + Chr8:4098674-4098693 MsG0880042124.01.T01:intron 35.0%
!! AGACGATTTTTCTTGGTCTT+TGG - Chr8:4102077-4102096 MsG0880042125.01.T01:intron 35.0%
!! ATAAGAAGGCGTTGATTCAA+TGG + Chr8:4100547-4100566 MsG0880042124.01.T01:intron 35.0%
!! CTTTCAACACCAATTTTTGG+TGG + Chr8:4100402-4100421 MsG0880042124.01.T01:intron 35.0%
!! GCAACTGATTTGCTGTAAAT+TGG - Chr8:4102391-4102410 MsG0880042125.01.T01:intron 35.0%
!! GGACTTGTTACCTTGAAATA+AGG - Chr8:4098996-4099015 None:intergenic 35.0%
!! GGTATCTTTATCGACTTCTT+TGG + Chr8:4099870-4099889 MsG0880042124.01.T01:CDS 35.0%
!! GTGTTTTTAATTGTGGTGGT+TGG + Chr8:4096872-4096891 MsG0880042124.01.T01:CDS 35.0%
!! GTTGTTGGTCTTGATTTGAT+TGG + Chr8:4102212-4102231 MsG0880042124.01.T01:CDS 35.0%
!! GTTTTTGGATCAAGTTTAGG+AGG + Chr8:4097113-4097132 MsG0880042124.01.T01:CDS 35.0%
!! TAAGGCTTTGTTGTTGTTGT+TGG + Chr8:4097354-4097373 MsG0880042124.01.T01:intron 35.0%
!! TAGGGTGTTTTTAATTGTGG+TGG + Chr8:4096868-4096887 MsG0880042124.01.T01:CDS 35.0%
!! TTGATAGTGTAATTCACCCA+AGG + Chr8:4099640-4099659 MsG0880042124.01.T01:intron 35.0%
!!! GATGGATTATCCTATGGTTT+TGG + Chr8:4097186-4097205 MsG0880042124.01.T01:CDS 35.0%
!!! GGTGTGTCTGTTTTTTTACA+AGG - Chr8:4096263-4096282 None:intergenic 35.0%
!!! GGTGTTTTTGGATCAAGTTT+AGG + Chr8:4097110-4097129 MsG0880042124.01.T01:CDS 35.0%
!!! GGTTGTTTTAAAGAGTAGGT+AGG + Chr8:4098048-4098067 MsG0880042124.01.T01:intron 35.0%
!!! TGTCTGTTTTTTTACAAGGG+AGG - Chr8:4096259-4096278 None:intergenic 35.0%
AAAGGGAGGTAAGAACATGT+AGG + Chr8:4097230-4097249 MsG0880042124.01.T01:intron 40.0%
AACTAAGGTCCCAGAAATAG+TGG - Chr8:4099622-4099641 None:intergenic 40.0%
AAGGAAAGACAGTGGTAGAT+GGG - Chr8:4096168-4096187 None:intergenic 40.0%
AAGGTGGGCATTTGTAAACA+AGG + Chr8:4099776-4099795 MsG0880042124.01.T01:CDS 40.0%
AATGTTCTATGAAGTGGGGT+TGG - Chr8:4098600-4098619 None:intergenic 40.0%
ACCTCCCTTTCATTACACAT+AGG - Chr8:4097220-4097239 None:intergenic 40.0%
ACTATAAATGGGAATGACCG+TGG - Chr8:4101810-4101829 MsG0880042125.01.T01:intron 40.0%
AGAAAGTAAGCTTCTAACCG+AGG - Chr8:4102141-4102160 MsG0880042125.01.T01:intron 40.0%
AGAAGCTTACTTTCTGCTCA+AGG + Chr8:4102146-4102165 MsG0880042124.01.T01:CDS 40.0%
AGACATAGGCTTATACGTAC+AGG + Chr8:4098852-4098871 MsG0880042124.01.T01:CDS 40.0%
AGATCTGGTTGCCTATGAAA+AGG + Chr8:4101956-4101975 MsG0880042124.01.T01:CDS 40.0%
AGATGCTGTCTAAACTGTTG+TGG + Chr8:4101133-4101152 MsG0880042124.01.T01:intron 40.0%
AGCACACACTCAACTCATTA+AGG - Chr8:4097773-4097792 None:intergenic 40.0%
AGGAATGTAACAAACAACCC+AGG - Chr8:4101754-4101773 MsG0880042125.01.T01:intron 40.0%
AGTGACAACGGTGATAAGAA+GGG - Chr8:4098550-4098569 None:intergenic 40.0%
ATAAAAAACAACAGCACCGC+TGG + Chr8:4100149-4100168 MsG0880042124.01.T01:CDS 40.0%
ATCAATGAGGATCTGAAAGG+AGG - Chr8:4102279-4102298 MsG0880042125.01.T01:intron 40.0%
ATGGGAGAATAGTAGATGAC+AGG - Chr8:4099493-4099512 None:intergenic 40.0%
ATGTGCATCAGTCTCAAGTT+TGG - Chr8:4099378-4099397 None:intergenic 40.0%
ATTGAAGGGAAGGGATGATT+TGG + Chr8:4099740-4099759 MsG0880042124.01.T01:intron 40.0%
CAATTTATCGTTCCACTTCG+AGG + Chr8:4099830-4099849 MsG0880042124.01.T01:CDS 40.0%
CATAGATCTTCCTCAGATTC+AGG + Chr8:4102011-4102030 MsG0880042124.01.T01:CDS 40.0%
CCAAGAAAAATCGTCTCTAC+AGG + Chr8:4102081-4102100 MsG0880042124.01.T01:CDS 40.0%
CCCAAAATTCTGCAATTGGT+AGG - Chr8:4099190-4099209 None:intergenic 40.0%
CCTGCATTAATGAAAACGCA+TGG + Chr8:4101024-4101043 MsG0880042124.01.T01:intron 40.0%
CTACTTCATCCGAATCATCA+AGG - Chr8:4098767-4098786 None:intergenic 40.0%
CTATAAATGGGAATGACCGT+GGG - Chr8:4101809-4101828 MsG0880042125.01.T01:intron 40.0%
CTCTTCAATACCTGAATCTG+AGG - Chr8:4102024-4102043 MsG0880042125.01.T01:intron 40.0%
CTTGCAGATGGGAAAATGAA+AGG + Chr8:4097881-4097900 MsG0880042124.01.T01:intron 40.0%
CTTTGGTGAGTAAAAGAGGA+GGG - Chr8:4096217-4096236 None:intergenic 40.0%
GAAGTGCAAGACAGTTATCA+TGG + Chr8:4096699-4096718 MsG0880042124.01.T01:CDS 40.0%
GAATCTTGTGCTAGAGTAGA+AGG + Chr8:4097465-4097484 MsG0880042124.01.T01:intron 40.0%
GCCAAACCTTAAACCTATCT+TGG + Chr8:4102320-4102339 MsG0880042124.01.T01:three_prime_UTR 40.0%
GCTTATACGTACAGGATACA+AGG + Chr8:4098860-4098879 MsG0880042124.01.T01:CDS 40.0%
GGAATCTGAACCAAAACCAT+AGG - Chr8:4097199-4097218 None:intergenic 40.0%
GGATCAAGTTTAGGAGGATT+AGG + Chr8:4097119-4097138 MsG0880042124.01.T01:CDS 40.0%
GTGCATAAATGGCAACAAAG+GGG + Chr8:4098813-4098832 MsG0880042124.01.T01:CDS 40.0%
GTTAGAACGAACAACTGTTG+AGG + Chr8:4099950-4099969 MsG0880042124.01.T01:CDS 40.0%
GTTATTGAGACACGGATTTC+TGG + Chr8:4102707-4102726 MsG0880042124.01.T01:three_prime_UTR 40.0%
TAAGGAAAGACAGTGGTAGA+TGG - Chr8:4096169-4096188 None:intergenic 40.0%
TAGTGACAACGGTGATAAGA+AGG - Chr8:4098551-4098570 None:intergenic 40.0%
TATAAATGGGAATGACCGTG+GGG - Chr8:4101808-4101827 MsG0880042125.01.T01:intron 40.0%
TATGCACTTCTGCCTTGATA+AGG - Chr8:4098800-4098819 None:intergenic 40.0%
TCATAATCCACACTAGCAAC+AGG - Chr8:4097145-4097164 None:intergenic 40.0%
TCCTATGTGTAATGAAAGGG+AGG + Chr8:4097216-4097235 MsG0880042124.01.T01:CDS 40.0%
TCTAGCACAAGATTCACAGA+AGG - Chr8:4097460-4097479 None:intergenic 40.0%
TGAGACGTATTAAGTTCCTC+CGG - Chr8:4101056-4101075 MsG0880042125.01.T01:intron 40.0%
TGTACAAGCATTCTCTCCTT+TGG - Chr8:4098741-4098760 None:intergenic 40.0%
TTAAAGAGTAGGTAGGCAGT+AGG + Chr8:4098055-4098074 MsG0880042124.01.T01:intron 40.0%
TTGTCAAATAGCAGCTACAC+TGG - Chr8:4097692-4097711 None:intergenic 40.0%
TTTGGTCTGAGTAGTGTTCA+TGG + Chr8:4100997-4101016 MsG0880042124.01.T01:intron 40.0%
TTTGTGGCTTGAATGTGTTG+TGG + Chr8:4097801-4097820 MsG0880042124.01.T01:intron 40.0%
TTTGTGTGATCCAAAGGGAA+AGG - Chr8:4096345-4096364 None:intergenic 40.0%
! AAAGCCTTATCCCACTAAGT+GGG - Chr8:4097343-4097362 None:intergenic 40.0%
! AATCTCCACCTTTTCAGTTC+AGG - Chr8:4102595-4102614 MsG0880042125.01.T01:intron 40.0%
! AATGTGTCGACACTTGAAGA+AGG + Chr8:4102531-4102550 MsG0880042124.01.T01:three_prime_UTR 40.0%
! AGAGCTTTGTAACTTGCAGA+TGG + Chr8:4097869-4097888 MsG0880042124.01.T01:intron 40.0%
! AGGTTCGGATTCCTTTTCAT+AGG - Chr8:4101970-4101989 MsG0880042125.01.T01:intron 40.0%
! AGTTGAGCTCCAACTTTTAG+TGG + Chr8:4102245-4102264 MsG0880042124.01.T01:exon 40.0%
! ATGTGTCGACACTTGAAGAA+GGG + Chr8:4102532-4102551 MsG0880042124.01.T01:three_prime_UTR 40.0%
! CCATGCGTTTTCATTAATGC+AGG - Chr8:4101027-4101046 MsG0880042125.01.T01:intron 40.0%
! CCTGTAGAGACGATTTTTCT+TGG - Chr8:4102084-4102103 MsG0880042125.01.T01:intron 40.0%
! CTTCTGCCTTGATAAGGTTT+TGG - Chr8:4098794-4098813 None:intergenic 40.0%
! GAGCTTTGTAACTTGCAGAT+GGG + Chr8:4097870-4097889 MsG0880042124.01.T01:intron 40.0%
! GCTAGTGTGGATTATGATGA+TGG + Chr8:4097148-4097167 MsG0880042124.01.T01:CDS 40.0%
! TCAAGGCAGAAGTGCATAAA+TGG + Chr8:4098802-4098821 MsG0880042124.01.T01:CDS 40.0%
! TCTTGATTTGATTGGAGAGC+AGG + Chr8:4102220-4102239 MsG0880042124.01.T01:CDS 40.0%
! TGGGTTGTTTGTTACATTCC+TGG + Chr8:4101753-4101772 MsG0880042124.01.T01:CDS 40.0%
! TTTGGTTTCAATGGAACTGC+TGG + Chr8:4099888-4099907 MsG0880042124.01.T01:CDS 40.0%
!! ATTGTGGTGGTTGGTTTGTT+AGG + Chr8:4096881-4096900 MsG0880042124.01.T01:CDS 40.0%
!! CTTGTTAGTGTTTTGAACCG+CGG + Chr8:4097501-4097520 MsG0880042124.01.T01:intron 40.0%
!! GAGTGTGATGGATTATCCTA+TGG + Chr8:4097180-4097199 MsG0880042124.01.T01:CDS 40.0%
!! GCTTTGGAAGTTCTTACGAA+TGG + Chr8:4101898-4101917 MsG0880042124.01.T01:CDS 40.0%
!! GGGGTAAGTTTTCTTGTTGT+TGG + Chr8:4102197-4102216 MsG0880042124.01.T01:CDS 40.0%
!! TAACTGCTGCAATGGATTGA+TGG - Chr8:4098704-4098723 None:intergenic 40.0%
!! TGTGTGCTCAAGTGTTTTTG+TGG + Chr8:4097785-4097804 MsG0880042124.01.T01:intron 40.0%
!! TTAAGAAATCTGGTGTTGGC+TGG - Chr8:4098962-4098981 None:intergenic 40.0%
!! TTGTGGTGGTTGGTTTGTTA+GGG + Chr8:4096882-4096901 MsG0880042124.01.T01:CDS 40.0%
!!! TGGTGCTGCTGATTTTTGTT+AGG + Chr8:4097374-4097393 MsG0880042124.01.T01:intron 40.0%
AAAAGACACCCCTACTACAC+TGG - Chr8:4097836-4097855 None:intergenic 45.0%
AAGGTCATCAGAGACAGATC+TGG + Chr8:4101941-4101960 MsG0880042124.01.T01:CDS 45.0%
ACAGCAAATCAGTTGCTGCT+TGG + Chr8:4102395-4102414 MsG0880042124.01.T01:three_prime_UTR 45.0%
ACAGCATCTTGTCTGCCTTT+AGG - Chr8:4101122-4101141 MsG0880042125.01.T01:intron 45.0%
ACAGTGGTAGATGGGAGATT+GGG - Chr8:4096160-4096179 None:intergenic 45.0%
ACGAACAACTGTTGAGGACA+TGG + Chr8:4099956-4099975 MsG0880042124.01.T01:CDS 45.0%
AGATCGTGAGTGCAATAGAC+TGG + Chr8:4097952-4097971 MsG0880042124.01.T01:intron 45.0%
AGCAACAACAACCGTTCAGA+TGG + Chr8:4096653-4096672 MsG0880042124.01.T01:CDS 45.0%
AGCATTCTCTCCTTTCCCTT+TGG + Chr8:4096332-4096351 MsG0880042124.01.T01:five_prime_UTR 45.0%
ATACGTACAGGATACAAGGC+AGG + Chr8:4098864-4098883 MsG0880042124.01.T01:CDS 45.0%
ATGAAACAAAAGGGACAGGG+TGG - Chr8:4098287-4098306 None:intergenic 45.0%
ATGTAACAAACAACCCAGGC+TGG - Chr8:4101750-4101769 MsG0880042125.01.T01:intron 45.0%
ATTTGGCATTAGTCCAGGCA+AGG + Chr8:4099757-4099776 MsG0880042124.01.T01:CDS 45.0%
CAACAAATCGCTGCAACTGT+TGG + Chr8:4096740-4096759 MsG0880042124.01.T01:CDS 45.0%
CAGCAGTTAGTATCCTGGAT+TGG + Chr8:4098715-4098734 MsG0880042124.01.T01:CDS 45.0%
CAGGATACTAACTGCTGCAA+TGG - Chr8:4098712-4098731 None:intergenic 45.0%
CATTGCAGCAGTTAGTATCC+TGG + Chr8:4098710-4098729 MsG0880042124.01.T01:CDS 45.0%
CCTCTAGTGAGTAGTGACAA+CGG - Chr8:4098562-4098581 None:intergenic 45.0%
CGACACAGATGGTTGTGATT+TGG - Chr8:4099216-4099235 None:intergenic 45.0%
CTGTCAACCACGGAAAATAG+TGG - Chr8:4098479-4098498 None:intergenic 45.0%
CTTAGGATAGACATGACTCC+AGG - Chr8:4101774-4101793 MsG0880042125.01.T01:intron 45.0%
GAACAAATCACTGTTCTCCG+CGG - Chr8:4097521-4097540 None:intergenic 45.0%
GACACTTGAAGAAGGGTTTC+TGG + Chr8:4102539-4102558 MsG0880042124.01.T01:three_prime_UTR 45.0%
GATCGTGAGTGCAATAGACT+GGG + Chr8:4097953-4097972 MsG0880042124.01.T01:intron 45.0%
GCAGAATAAGCTTCCTCAGA+AGG - Chr8:4101659-4101678 MsG0880042125.01.T01:intron 45.0%
GCATAACCTTCAGCCAATGA+TGG - Chr8:4101227-4101246 MsG0880042125.01.T01:intron 45.0%
GCATCAGTCTCAAGTTTGGA+GGG - Chr8:4099374-4099393 None:intergenic 45.0%
GCTATAGTGCTACAGTCTAG+CGG + Chr8:4098433-4098452 MsG0880042124.01.T01:intron 45.0%
GCTGCTATAGCACTATAGTG+TGG - Chr8:4097551-4097570 None:intergenic 45.0%
GCTTTGGTGAGTAAAAGAGG+AGG - Chr8:4096218-4096237 None:intergenic 45.0%
GGCATGAAACAAAAGGGACA+GGG - Chr8:4098290-4098309 None:intergenic 45.0%
TACGTACAGGATACAAGGCA+GGG + Chr8:4098865-4098884 MsG0880042124.01.T01:CDS 45.0%
TCATTGTGCAGTCTGTGGAT+AGG + Chr8:4097071-4097090 MsG0880042124.01.T01:CDS 45.0%
TCCATTGACCATGTTCCTTC+CGG + Chr8:4101713-4101732 MsG0880042124.01.T01:CDS 45.0%
TGAAACAAAAGGGACAGGGT+GGG - Chr8:4098286-4098305 None:intergenic 45.0%
TGAGCCTAAGATGTTCTCAG+TGG + Chr8:4102356-4102375 MsG0880042124.01.T01:three_prime_UTR 45.0%
TGCATCAGTCTCAAGTTTGG+AGG - Chr8:4099375-4099394 None:intergenic 45.0%
TGCTGGTGTCTGGAGAATAA+AGG + Chr8:4099905-4099924 MsG0880042124.01.T01:CDS 45.0%
TGGAAGTTCTTACGAATGGG+TGG + Chr8:4101902-4101921 MsG0880042124.01.T01:CDS 45.0%
TGGCATGAAACAAAAGGGAC+AGG - Chr8:4098291-4098310 None:intergenic 45.0%
TGTAACAAACAACCCAGGCT+GGG - Chr8:4101749-4101768 MsG0880042125.01.T01:intron 45.0%
TTATACGCCTCGTAAGTCTC+TGG - Chr8:4100133-4100152 None:intergenic 45.0%
TTCGTCAAACTCTGCAAAGG+CGG - Chr8:4097034-4097053 None:intergenic 45.0%
TTCTGCTGATGTGTTGGGAT+TGG + Chr8:4096958-4096977 MsG0880042124.01.T01:CDS 45.0%
TTTGCCTGCCTGAACTGAAA+AGG + Chr8:4102584-4102603 MsG0880042124.01.T01:three_prime_UTR 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr8:4097342-4097361 None:intergenic 45.0%
! ATCGTCTTCGCGGCTTTATA+GGG + Chr8:4096841-4096860 MsG0880042124.01.T01:CDS 45.0%
! ATGACTTGGCAACAACAACG+AGG - Chr8:4102466-4102485 MsG0880042125.01.T01:intron 45.0%
! CAAAGCCTTATCCCACTAAG+TGG - Chr8:4097344-4097363 None:intergenic 45.0%
! GAACAGACCACTATTTTCCG+TGG + Chr8:4098469-4098488 MsG0880042124.01.T01:intron 45.0%
! GAGGTGTTAAGGAAAGACAG+TGG - Chr8:4096176-4096195 None:intergenic 45.0%
! GCGGCTTTATAGGGTGATTA+GGG + Chr8:4096850-4096869 MsG0880042124.01.T01:CDS 45.0%
! GCTGCTTTGGTGAGTAAAAG+AGG - Chr8:4096221-4096240 None:intergenic 45.0%
! GCTTTTCATTGTGCAGTCTG+TGG + Chr8:4097066-4097085 MsG0880042124.01.T01:CDS 45.0%
! GGATGATTTGGCATTAGTCC+AGG + Chr8:4099752-4099771 MsG0880042124.01.T01:CDS 45.0%
! TCGTTGATTACTTCATGCGG+AGG - Chr8:4101356-4101375 MsG0880042125.01.T01:intron 45.0%
! TGGAGGGAATTGAGGTGTTA+AGG - Chr8:4096187-4096206 None:intergenic 45.0%
!! AATGGCAACAAAGGGGTGTT+CGG + Chr8:4098820-4098839 MsG0880042124.01.T01:CDS 45.0%
!! ACGCCAGGTGGATTGATATT+CGG + Chr8:4096993-4097012 MsG0880042124.01.T01:CDS 45.0%
!! CTGTGGCACTTGTGTTTTTG+TGG + Chr8:4098027-4098046 MsG0880042124.01.T01:intron 45.0%
!! GTTGGTTCTGCTGATGTGTT+GGG + Chr8:4096953-4096972 MsG0880042124.01.T01:CDS 45.0%
!! TAGTATCCTGGATTGGCCAA+AGG + Chr8:4098722-4098741 MsG0880042124.01.T01:CDS 45.0%
!! TGATGTGTTGGGATTGGTTG+CGG + Chr8:4096964-4096983 MsG0880042124.01.T01:CDS 45.0%
!!! TATTATTTTTATTTTAAGAA+TGG + Chr8:4100321-4100340 MsG0880042124.01.T01:intron 5.0%
ACATCAGCAGAACCAACCGA+AGG - Chr8:4096950-4096969 None:intergenic 50.0%
ACTAAGTGGGGTCGGCTAAA+TGG - Chr8:4097330-4097349 None:intergenic 50.0%
ATAAAGGCCCTAGAGGAGAG+TGG + Chr8:4099921-4099940 MsG0880042124.01.T01:CDS 50.0%
ATGAAGTGGGGTTGGAGAGA+CGG - Chr8:4098592-4098611 None:intergenic 50.0%
ATTTAGCCGACCCCACTTAG+TGG + Chr8:4097329-4097348 MsG0880042124.01.T01:intron 50.0%
CCGTTGTCACTACTCACTAG+AGG + Chr8:4098559-4098578 MsG0880042124.01.T01:intron 50.0%
CTGGAGAATAAAGGCCCTAG+AGG + Chr8:4099914-4099933 MsG0880042124.01.T01:CDS 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr8:4097338-4097357 None:intergenic 50.0%
GACAGTGGTAGATGGGAGAT+TGG - Chr8:4096161-4096180 None:intergenic 50.0%
GAGCAATTAGGAGCTCTCTC+TGG + Chr8:4101089-4101108 MsG0880042124.01.T01:intron 50.0%
GAGGTTGAACAGCAGGTGAA+TGG + Chr8:4099849-4099868 MsG0880042124.01.T01:CDS 50.0%
GATTAGGCCTGTTGCTAGTG+TGG + Chr8:4097135-4097154 MsG0880042124.01.T01:CDS 50.0%
GTATCCGTTGATGTTACCGG+AGG + Chr8:4096611-4096630 MsG0880042124.01.T01:CDS 50.0%
TAAGTGTTCTTCCAGCCCCA+CGG + Chr8:4101790-4101809 MsG0880042124.01.T01:CDS 50.0%
TCAATGGAACTGCTGGTGTC+TGG + Chr8:4099895-4099914 MsG0880042124.01.T01:CDS 50.0%
TCCACCTCCGGTAACATCAA+CGG - Chr8:4096618-4096637 None:intergenic 50.0%
TCCGGAAGGAACATGGTCAA+TGG - Chr8:4101717-4101736 MsG0880042125.01.T01:intron 50.0%
TGAGCTTCCAGAGACTTACG+AGG + Chr8:4100123-4100142 MsG0880042124.01.T01:CDS 50.0%
TGCCCGAATATCAATCCACC+TGG - Chr8:4096999-4097018 None:intergenic 50.0%
TGCTGTGAGCCAGTGTAGTA+GGG + Chr8:4097824-4097843 MsG0880042124.01.T01:intron 50.0%
TGGTGAGTAAAAGAGGAGGG+TGG - Chr8:4096214-4096233 None:intergenic 50.0%
TTACAAATGCCCACCTTGCC+TGG - Chr8:4099773-4099792 None:intergenic 50.0%
TTCTCTCCTTTGGCCAATCC+AGG - Chr8:4098731-4098750 None:intergenic 50.0%
TTTAGCCGACCCCACTTAGT+GGG + Chr8:4097330-4097349 MsG0880042124.01.T01:intron 50.0%
! AAGTCTCTGGAAGCTCACAG+AGG - Chr8:4100120-4100139 None:intergenic 50.0%
! CATCGTCTTCGCGGCTTTAT+AGG + Chr8:4096840-4096859 MsG0880042124.01.T01:CDS 50.0%
! CGCGGCTTTATAGGGTGATT+AGG + Chr8:4096849-4096868 MsG0880042124.01.T01:CDS 50.0%
! TCCACCTTTTCAGTTCAGGC+AGG - Chr8:4102591-4102610 MsG0880042125.01.T01:intron 50.0%
!! CGCCAGGTGGATTGATATTC+GGG + Chr8:4096994-4097013 MsG0880042124.01.T01:CDS 50.0%
!! GGTTGGTTCTGCTGATGTGT+TGG + Chr8:4096952-4096971 MsG0880042124.01.T01:CDS 50.0%
!! TGGGAGTGTTGAGAGTGTGA+TGG + Chr8:4097168-4097187 MsG0880042124.01.T01:CDS 50.0%
AACAAAAGGGACAGGGTGGG+TGG - Chr8:4098283-4098302 None:intergenic 55.0%
AAGCCACCTTGCGCCATCAT+TGG + Chr8:4101211-4101230 MsG0880042124.01.T01:intron 55.0%
AGTGCTACAGTCTAGCGGTG+TGG + Chr8:4098438-4098457 MsG0880042124.01.T01:intron 55.0%
CCACTTCGAGGTTGAACAGC+AGG + Chr8:4099842-4099861 MsG0880042124.01.T01:CDS 55.0%
CCTGCTGTTCAACCTCGAAG+TGG - Chr8:4099845-4099864 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr8:4097336-4097355 MsG0880042124.01.T01:intron 55.0%
CTCAGCTTCCGGAAGGAACA+TGG - Chr8:4101724-4101743 MsG0880042125.01.T01:intron 55.0%
CTCTCTGGACTCTGGCCTAA+AGG + Chr8:4101104-4101123 MsG0880042124.01.T01:intron 55.0%
GCATTGGACCAGAATGCCAG+CGG - Chr8:4100168-4100187 None:intergenic 55.0%
GCCTGCCTGAACTGAAAAGG+TGG + Chr8:4102587-4102606 MsG0880042124.01.T01:three_prime_UTR 55.0%
GCTGTGAGCCAGTGTAGTAG+GGG + Chr8:4097825-4097844 MsG0880042124.01.T01:intron 55.0%
GCTGTTCGTGCTCATCTCTG+CGG + Chr8:4099984-4100003 MsG0880042124.01.T01:CDS 55.0%
GGCATTAGTCCAGGCAAGGT+GGG + Chr8:4099761-4099780 MsG0880042124.01.T01:CDS 55.0%
GTGAGATACACGCGCTGCTT+TGG - Chr8:4096234-4096253 None:intergenic 55.0%
GTGCTGTGAGCCAGTGTAGT+AGG + Chr8:4097823-4097842 MsG0880042124.01.T01:intron 55.0%
GTGGGGCTGGAAGAACACTT+AGG - Chr8:4101791-4101810 MsG0880042125.01.T01:intron 55.0%
GTTGATGTTACCGGAGGTGG+AGG + Chr8:4096617-4096636 MsG0880042124.01.T01:CDS 55.0%
TAGGAGCTCTCTCTGGACTC+TGG + Chr8:4101096-4101115 MsG0880042124.01.T01:intron 55.0%
TCAGCAGAACCAACCGAAGG+CGG - Chr8:4096947-4096966 None:intergenic 55.0%
TCCGTTGATGTTACCGGAGG+TGG + Chr8:4096614-4096633 MsG0880042124.01.T01:CDS 55.0%
TGAAAACGCATGGAAGGGGC+CGG + Chr8:4101034-4101053 MsG0880042124.01.T01:intron 55.0%
TGGCATTAGTCCAGGCAAGG+TGG + Chr8:4099760-4099779 MsG0880042124.01.T01:CDS 55.0%
TTCGTGCTCATCTCTGCGGA+TGG + Chr8:4099988-4100007 MsG0880042124.01.T01:CDS 55.0%
! CATTTTAGGCCGCCTTCGGT+TGG + Chr8:4096935-4096954 MsG0880042124.01.T01:CDS 55.0%
! CTGGCATTTTAGGCCGCCTT+CGG + Chr8:4096931-4096950 MsG0880042124.01.T01:CDS 55.0%
! CTTCAGCCAATGATGGCGCA+AGG - Chr8:4101220-4101239 MsG0880042125.01.T01:intron 55.0%
! CTTGCGCCATCATTGGCTGA+AGG + Chr8:4101218-4101237 MsG0880042124.01.T01:intron 55.0%
! TGGTTGCGGTGTTTTACGCC+AGG + Chr8:4096978-4096997 MsG0880042124.01.T01:CDS 55.0%
! TTGCGGTGTTTTACGCCAGG+TGG + Chr8:4096981-4097000 MsG0880042124.01.T01:CDS 55.0%
!! GCGCTGATTCATCGTCTTCG+CGG + Chr8:4096831-4096850 MsG0880042124.01.T01:CDS 55.0%
AAGGCCCTAGAGGAGAGTGG+CGG + Chr8:4099924-4099943 MsG0880042124.01.T01:CDS 60.0%
AATGGGAATGACCGTGGGGC+TGG - Chr8:4101804-4101823 MsG0880042125.01.T01:intron 60.0%
CAACAGCACCGCTGGCATTC+TGG + Chr8:4100157-4100176 MsG0880042124.01.T01:CDS 60.0%
GATGTTACCGGAGGTGGAGG+AGG + Chr8:4096620-4096639 MsG0880042124.01.T01:CDS 60.0%
TAAAAGAGGAGGGTGGCGCG+TGG - Chr8:4096207-4096226 None:intergenic 60.0%
TCCACATCCTCCTCCACCTC+CGG - Chr8:4096630-4096649 None:intergenic 60.0%
! CAGCCAATGATGGCGCAAGG+TGG - Chr8:4101217-4101236 MsG0880042125.01.T01:intron 60.0%
AAACGCATGGAAGGGGCCGG+AGG + Chr8:4101037-4101056 MsG0880042124.01.T01:intron 65.0%
ACCAGCCGCCACTCTCCTCT+AGG - Chr8:4099932-4099951 None:intergenic 65.0%
ACCGGAGGTGGAGGAGGATG+TGG + Chr8:4096626-4096645 MsG0880042124.01.T01:CDS 65.0%
CAGGCTGGGAGCTCAGCTTC+CGG - Chr8:4101735-4101754 MsG0880042125.01.T01:intron 65.0%
CCAGCCGCCACTCTCCTCTA+GGG - Chr8:4099931-4099950 None:intergenic 65.0%
CTGGGAGCTCAGCTTCCGGA+AGG - Chr8:4101731-4101750 MsG0880042125.01.T01:intron 65.0%
GGAAGCTGAGCTCCCAGCCT+GGG + Chr8:4101734-4101753 MsG0880042124.01.T01:CDS 65.0%
GGAGGTGGAGGAGGATGTGG+AGG + Chr8:4096629-4096648 MsG0880042124.01.T01:CDS 65.0%
GTGGCGCGTGGAGGGAATTG+AGG - Chr8:4096195-4096214 None:intergenic 65.0%
AAGAGGAGGGTGGCGCGTGG+AGG - Chr8:4096204-4096223 None:intergenic 70.0%
AGAGGAGGGTGGCGCGTGGA+GGG - Chr8:4096203-4096222 None:intergenic 70.0%
CCCTAGAGGAGAGTGGCGGC+TGG + Chr8:4099928-4099947 MsG0880042124.01.T01:CDS 70.0%
CGGAAGCTGAGCTCCCAGCC+TGG + Chr8:4101733-4101752 MsG0880042124.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 4096083 4102789 4096083 ID=MsG0880042124.01;Name=MsG0880042124.01
Chr8 mRNA 4096083 4102789 4096083 ID=MsG0880042124.01.T01;Parent=MsG0880042124.01;Name=MsG0880042124.01.T01;_AED=0.28;_eAED=0.28;_QI=408|1|1|1|0.75|1|5|539|698
Chr8 exon 4096083 4097237 4096083 ID=MsG0880042124.01.T01:exon:1666;Parent=MsG0880042124.01.T01
Chr8 exon 4098696 4099004 4098696 ID=MsG0880042124.01.T01:exon:1667;Parent=MsG0880042124.01.T01
Chr8 exon 4099747 4100037 4099747 ID=MsG0880042124.01.T01:exon:1668;Parent=MsG0880042124.01.T01
Chr8 exon 4100115 4100228 4100115 ID=MsG0880042124.01.T01:exon:1669;Parent=MsG0880042124.01.T01
Chr8 exon 4101615 4102789 4101615 ID=MsG0880042124.01.T01:exon:1670;Parent=MsG0880042124.01.T01
Chr8 five_prime_UTR 4096083 4096490 4096083 ID=MsG0880042124.01.T01:five_prime_utr;Parent=MsG0880042124.01.T01
Chr8 CDS 4096491 4097237 4096491 ID=MsG0880042124.01.T01:cds;Parent=MsG0880042124.01.T01
Chr8 CDS 4098696 4099004 4098696 ID=MsG0880042124.01.T01:cds;Parent=MsG0880042124.01.T01
Chr8 CDS 4099747 4100037 4099747 ID=MsG0880042124.01.T01:cds;Parent=MsG0880042124.01.T01
Chr8 CDS 4100115 4100228 4100115 ID=MsG0880042124.01.T01:cds;Parent=MsG0880042124.01.T01
Chr8 CDS 4101615 4102250 4101615 ID=MsG0880042124.01.T01:cds;Parent=MsG0880042124.01.T01
Chr8 three_prime_UTR 4102251 4102789 4102251 ID=MsG0880042124.01.T01:three_prime_utr;Parent=MsG0880042124.01.T01
Gene Sequence

>MsG0880042124.01.T01

ATGTCTCGTGCACCAAATTACGAGTTTCAAGAATGGTGGAACAAACAAAGAGAAAAAGAAAATCTAGATTTATTCGAAGATAATAATAAATCAGATCAATCTCAATCTTCTTCTCCATTTGTATCCGTTGATGTTACCGGAGGTGGAGGAGGATGTGGAGGAAGCAACAACAACCGTTCAGATGGATCTGTGAAAAAAGAACGAACACGAAGTGCAAGACAGTTATCATGGGTTTGTTTGTTAAAATTTCAACAAATCGCTGCAACTGTTGGATTTATATCAAATGGATTACTTTATCTTGTAAGGACAGCGAATAGACGAGTTTTATCGCGTGATTCGCGCGCTGATTCATCGTCTTCGCGGCTTTATAGGGTGATTAGGGTGTTTTTAATTGTGGTGGTTGGTTTGTTAGGGTTTGAGTTGATTGCATATTTTAAAGGCTGGCATTTTAGGCCGCCTTCGGTTGGTTCTGCTGATGTGTTGGGATTGGTTGCGGTGTTTTACGCCAGGTGGATTGATATTCGGGCAAATTATTTGGCGCCGCCTTTGCAGAGTTTGACGAATATGTGTATTGTGCTTTTCATTGTGCAGTCTGTGGATAGGATTGTTTTGATTTTGGGGTGTTTTTGGATCAAGTTTAGGAGGATTAGGCCTGTTGCTAGTGTGGATTATGATGATGGGAGTGTTGAGAGTGTGATGGATTATCCTATGGTTTTGGTTCAGATTCCTATGTGTAATGAAAGGGAGGTTTACCATCAATCCATTGCAGCAGTTAGTATCCTGGATTGGCCAAAGGAGAGAATGCTTGTACAAGTCCTTGATGATTCGGATGAAGTAGATATCCAAAACCTTATCAAGGCAGAAGTGCATAAATGGCAACAAAGGGGTGTTCGGATCATATATAGACATAGGCTTATACGTACAGGATACAAGGCAGGGAATCTTAAATCTGCAATGAGTTGTGATTATGTTAAGGATTATGACTTTGTGGCAATATTTGATGCTGATTTCCAGCCAACACCAGATTTCTTAAAGAAGACGATACCTTATTTCAAGGGAAGGGATGATTTGGCATTAGTCCAGGCAAGGTGGGCATTTGTAAACAAGGATGAGAACTTGCTTACAAGATTACAGAATATCAATTTATCGTTCCACTTCGAGGTTGAACAGCAGGTGAATGGTATCTTTATCGACTTCTTTGGTTTCAATGGAACTGCTGGTGTCTGGAGAATAAAGGCCCTAGAGGAGAGTGGCGGCTGGTTAGAACGAACAACTGTTGAGGACATGGACATTGCTGTTCGTGCTCATCTCTGCGGATGGAAGTTTATTTTTCTCAATGATGTTAAGTGCCTCTGTGAGCTTCCAGAGACTTACGAGGCGTATAAAAAACAACAGCACCGCTGGCATTCTGGTCCAATGCAATTGTTTCGTATGTGTTTTGTTGATGTACTTCGTTCAAAGGTTAGTTGGGCAAAAAAGTTCAACTTGATCTTTCTTTTCTTCCTTCTGAGGAAGCTTATTCTGCCATTTTATTCGTTCACGCTCTTCTGCATTATTCTTCCATTGACCATGTTCCTTCCGGAAGCTGAGCTCCCAGCCTGGGTTGTTTGTTACATTCCTGGAGTCATGTCTATCCTAAGTGTTCTTCCAGCCCCACGGTCATTCCCATTTATAGTGCCTTATCTTCTATTTGAGAACACTATGTCAGTAACTAAGTTTAATGCAATGATATCCGGATTATTTCGCTTTGGAAGTTCTTACGAATGGGTGGTTACAAAAAAACTAGGAAGGTCATCAGAGACAGATCTGGTTGCCTATGAAAAGGAATCCGAACCTCTAATGCGATCTAATAGTCTTCATAGATCTTCCTCAGATTCAGGTATTGAAGAGCTAAGCAAACTAGAATTGTCAAAGATAGCTCCAAAGACCAAGAAAAATCGTCTCTACAGGAAAGAACTTGCTCTTGCATTTATTTTGTTAACTGCCTCGGTTAGAAGCTTACTTTCTGCTCAAGGAATTCACTTCTACTTCCTATTATTTCAAGGGGTAAGTTTTCTTGTTGTTGGTCTTGATTTGATTGGAGAGCAGGTTAGTTGA
Protein sequence

>MsG0880042124.01.T01

MSRAPNYEFQEWWNKQREKENLDLFEDNNKSDQSQSSSPFVSVDVTGGGGGCGGSNNNRSDGSVKKERTRSARQLSWVCLLKFQQIAATVGFISNGLLYLVRTANRRVLSRDSRADSSSSRLYRVIRVFLIVVVGLLGFELIAYFKGWHFRPPSVGSADVLGLVAVFYARWIDIRANYLAPPLQSLTNMCIVLFIVQSVDRIVLILGCFWIKFRRIRPVASVDYDDGSVESVMDYPMVLVQIPMCNEREVYHQSIAAVSILDWPKERMLVQVLDDSDEVDIQNLIKAEVHKWQQRGVRIIYRHRLIRTGYKAGNLKSAMSCDYVKDYDFVAIFDADFQPTPDFLKKTIPYFKGRDDLALVQARWAFVNKDENLLTRLQNINLSFHFEVEQQVNGIFIDFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLCGWKFIFLNDVKCLCELPETYEAYKKQQHRWHSGPMQLFRMCFVDVLRSKVSWAKKFNLIFLFFLLRKLILPFYSFTLFCIILPLTMFLPEAELPAWVVCYIPGVMSILSVLPAPRSFPFIVPYLLFENTMSVTKFNAMISGLFRFGSSYEWVVTKKLGRSSETDLVAYEKESEPLMRSNSLHRSSSDSGIEELSKLELSKIAPKTKKNRLYRKELALAFILLTASVRSLLSAQGIHFYFLLFQGVSFLVVGLDLIGEQVS*