Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017240.01.T01 | XP_013461819.1 | 98.578 | 703 | 4 | 3 | 1 | 702 | 1 | 698 | 0 | 1415 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017240.01.T01 | Q9ZQB9 | 76.999 | 713 | 139 | 8 | 1 | 702 | 1 | 699 | 0 | 1071 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017240.01.T01 | A0A072V1K1 | 98.578 | 703 | 4 | 3 | 1 | 702 | 1 | 698 | 0.0 | 1415 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0380017240.01 | 0.830624 | 2.643870e-55 | 2.800710e-52 |
| MsG0080048700.01 | MsG0380017240.01 | 0.816030 | 6.823190e-52 | 4.781176e-49 |
| MsG0080048701.01 | MsG0380017240.01 | 0.834045 | 3.761520e-56 | 4.411464e-53 |
| MsG0080048996.01 | MsG0380017240.01 | 0.809520 | 1.817245e-50 | 1.069277e-47 |
| MsG0080049140.01 | MsG0380017240.01 | 0.807179 | 5.735340e-50 | 3.173066e-47 |
| MsG0180000001.01 | MsG0380017240.01 | 0.806735 | 7.119124e-50 | 3.893650e-47 |
| MsG0180000185.01 | MsG0380017240.01 | 0.812944 | 3.285100e-51 | 2.116664e-48 |
| MsG0180000275.01 | MsG0380017240.01 | 0.804146 | 2.485272e-49 | 1.271834e-46 |
| MsG0180000360.01 | MsG0380017240.01 | 0.864820 | 9.234069e-65 | 2.938251e-61 |
| MsG0180000364.01 | MsG0380017240.01 | 0.803037 | 4.219577e-49 | 2.098689e-46 |
| MsG0180000445.01 | MsG0380017240.01 | 0.839525 | 1.504148e-57 | 2.082604e-54 |
| MsG0180001117.01 | MsG0380017240.01 | 0.811207 | 7.856037e-51 | 4.833459e-48 |
| MsG0180001198.01 | MsG0380017240.01 | 0.856932 | 2.302935e-62 | 5.586935e-59 |
| MsG0180001237.01 | MsG0380017240.01 | 0.830260 | 3.245264e-55 | 3.401736e-52 |
| MsG0180002421.01 | MsG0380017240.01 | 0.803871 | 2.834888e-49 | 1.440592e-46 |
| MsG0180002984.01 | MsG0380017240.01 | 0.850892 | 1.265927e-60 | 2.516791e-57 |
| MsG0180003427.01 | MsG0380017240.01 | 0.817759 | 2.791122e-52 | 2.050682e-49 |
| MsG0180003796.01 | MsG0380017240.01 | 0.811765 | 5.945219e-51 | 3.711954e-48 |
| MsG0180003820.01 | MsG0380017240.01 | 0.832736 | 7.972032e-56 | 8.989990e-53 |
| MsG0180004027.01 | MsG0380017240.01 | 0.842666 | 2.249526e-58 | 3.434900e-55 |
| MsG0180004126.01 | MsG0380017240.01 | 0.864440 | 1.213926e-64 | 3.812036e-61 |
| MsG0180004510.01 | MsG0380017240.01 | 0.814868 | 1.237524e-51 | 8.400187e-49 |
| MsG0180004754.01 | MsG0380017240.01 | 0.826952 | 2.045185e-54 | 1.946628e-51 |
| MsG0180004806.01 | MsG0380017240.01 | 0.806207 | 9.199821e-50 | 4.964412e-47 |
| MsG0180004989.01 | MsG0380017240.01 | 0.849573 | 2.965141e-60 | 5.645395e-57 |
| MsG0180005188.01 | MsG0380017240.01 | 0.840104 | 1.063062e-57 | 1.498812e-54 |
| MsG0180005504.01 | MsG0380017240.01 | 0.817614 | 3.009385e-52 | 2.202137e-49 |
| MsG0180005667.01 | MsG0380017240.01 | 0.849007 | 4.263014e-60 | 7.970303e-57 |
| MsG0180005835.01 | MsG0380017240.01 | 0.835223 | 1.901872e-56 | 2.310922e-53 |
| MsG0180006026.01 | MsG0380017240.01 | 0.811702 | 6.133798e-51 | 3.823290e-48 |
| MsG0180006182.01 | MsG0380017240.01 | 0.841040 | 6.045553e-58 | 8.773310e-55 |
| MsG0180006235.01 | MsG0380017240.01 | 0.812615 | 3.877199e-51 | 2.476769e-48 |
| MsG0180006260.01 | MsG0380017240.01 | 0.834027 | 3.799617e-56 | 4.453739e-53 |
| MsG0280010779.01 | MsG0380017240.01 | 0.800028 | 1.746050e-48 | 8.045908e-46 |
| MsG0280010795.01 | MsG0380017240.01 | 0.822761 | 1.992871e-53 | 1.683542e-50 |
| MsG0280010868.01 | MsG0380017240.01 | 0.829553 | 4.827669e-55 | 4.957265e-52 |
| MsG0280010977.01 | MsG0380017240.01 | 0.849827 | 2.517682e-60 | 4.833702e-57 |
| MsG0280011154.01 | MsG0380017240.01 | 0.805155 | 1.529771e-49 | 8.034850e-47 |
| MsG0380011536.01 | MsG0380017240.01 | 0.806547 | 7.802507e-50 | 4.246861e-47 |
| MsG0380012522.01 | MsG0380017240.01 | 0.800996 | 1.108904e-48 | 5.237401e-46 |
| MsG0380013041.01 | MsG0380017240.01 | 0.818518 | 1.880359e-52 | 1.410652e-49 |
| MsG0380013548.01 | MsG0380017240.01 | 0.822154 | 2.756338e-53 | 2.288356e-50 |
| MsG0380014171.01 | MsG0380017240.01 | 0.812231 | 4.703714e-51 | 2.974184e-48 |
| MsG0380015350.01 | MsG0380017240.01 | 0.813016 | 3.167608e-51 | 2.045022e-48 |
| MsG0380015548.01 | MsG0380017240.01 | 0.877562 | 5.689414e-69 | 2.873054e-65 |
| MsG0380015641.01 | MsG0380017240.01 | 0.811233 | 7.757822e-51 | 4.776187e-48 |
| MsG0380015816.01 | MsG0380017240.01 | 0.817743 | 2.815414e-52 | 2.067580e-49 |
| MsG0380016449.01 | MsG0380017240.01 | 0.815400 | 9.425597e-52 | 6.491692e-49 |
| MsG0380016567.01 | MsG0380017240.01 | 0.806464 | 8.121490e-50 | 4.411175e-47 |
| MsG0380016703.01 | MsG0380017240.01 | 0.840036 | 1.107053e-57 | 1.557630e-54 |
| MsG0380016994.01 | MsG0380017240.01 | 0.842642 | 2.282108e-58 | 3.482032e-55 |
| MsG0380017091.01 | MsG0380017240.01 | 0.865145 | 7.303717e-65 | 2.351625e-61 |
| MsG0380017159.01 | MsG0380017240.01 | 0.865341 | 6.333614e-65 | 2.053356e-61 |
| MsG0380017239.01 | MsG0380017240.01 | 0.813485 | 2.498898e-51 | 1.634073e-48 |
| MsG0380017240.01 | MsG0380017643.01 | 0.817341 | 3.467726e-52 | 2.518652e-49 |
| MsG0380017240.01 | MsG0380017836.01 | 0.843897 | 1.056416e-58 | 1.677063e-55 |
| MsG0380017240.01 | MsG0380017983.01 | 0.834830 | 2.389021e-56 | 2.868567e-53 |
| MsG0380017240.01 | MsG0380017997.01 | 0.814376 | 1.589863e-51 | 1.065013e-48 |
| MsG0380017240.01 | MsG0380018007.01 | 0.844413 | 7.677984e-59 | 1.238523e-55 |
| MsG0380017240.01 | MsG0480018230.01 | 0.838853 | 2.246501e-57 | 3.047293e-54 |
| MsG0380017240.01 | MsG0480018256.01 | 0.857047 | 2.130039e-62 | 5.188001e-59 |
| MsG0380017240.01 | MsG0480018526.01 | 0.806243 | 9.041264e-50 | 4.883271e-47 |
| MsG0380017240.01 | MsG0480018845.01 | 0.812325 | 4.488457e-51 | 2.845186e-48 |
| MsG0380017240.01 | MsG0480018846.01 | 0.813534 | 2.438614e-51 | 1.596715e-48 |
| MsG0380017240.01 | MsG0480018885.01 | 0.825318 | 5.003294e-54 | 4.545041e-51 |
| MsG0380017240.01 | MsG0480019635.01 | 0.834822 | 2.399556e-56 | 2.880463e-53 |
| MsG0380017240.01 | MsG0480020597.01 | 0.807432 | 5.070546e-50 | 2.823709e-47 |
| MsG0380017240.01 | MsG0480021156.01 | 0.871372 | 7.188150e-67 | 2.892772e-63 |
| MsG0380017240.01 | MsG0480021158.01 | 0.851244 | 1.007181e-60 | 2.025881e-57 |
| MsG0380017240.01 | MsG0480021225.01 | 0.851643 | 7.764127e-61 | 1.581826e-57 |
| MsG0380017240.01 | MsG0480021812.01 | 0.800435 | 1.443054e-48 | 6.718864e-46 |
| MsG0380017240.01 | MsG0480022057.01 | -0.802482 | 5.494472e-49 | 2.694424e-46 |
| MsG0380017240.01 | MsG0480022167.01 | 0.862482 | 4.910826e-64 | 1.440561e-60 |
| MsG0380017240.01 | MsG0480022228.01 | 0.810700 | 1.011865e-50 | 6.142301e-48 |
| MsG0380017240.01 | MsG0480022325.01 | 0.905296 | 4.984528e-80 | 8.009405e-76 |
| MsG0380017240.01 | MsG0480022331.01 | 0.825835 | 3.774730e-54 | 3.479787e-51 |
| MsG0380017240.01 | MsG0480022620.01 | 0.810878 | 9.258652e-51 | 5.647232e-48 |
| MsG0380017240.01 | MsG0480022952.01 | 0.806649 | 7.422788e-50 | 4.050365e-47 |
| MsG0380017240.01 | MsG0480023053.01 | 0.886459 | 3.359091e-72 | 2.401567e-68 |
| MsG0380017240.01 | MsG0480023064.01 | 0.820827 | 5.583100e-53 | 4.465662e-50 |
| MsG0380017240.01 | MsG0480023105.01 | 0.816521 | 5.298784e-52 | 3.763098e-49 |
| MsG0380017240.01 | MsG0480023296.01 | 0.815355 | 9.648063e-52 | 6.636665e-49 |
| MsG0380017240.01 | MsG0480023324.01 | 0.841248 | 5.331652e-58 | 7.787043e-55 |
| MsG0380017240.01 | MsG0480023421.01 | 0.800424 | 1.450899e-48 | 6.753573e-46 |
| MsG0380017240.01 | MsG0480023450.01 | 0.823018 | 1.736249e-53 | 1.477436e-50 |
| MsG0380017240.01 | MsG0480023541.01 | 0.800550 | 1.367502e-48 | 6.385437e-46 |
| MsG0380017240.01 | MsG0480023620.01 | 0.902126 | 1.332364e-78 | 1.859303e-74 |
| MsG0380017240.01 | MsG0480023672.01 | 0.826895 | 2.110340e-54 | 2.005274e-51 |
| MsG0380017240.01 | MsG0480023808.01 | 0.810259 | 1.259844e-50 | 7.558436e-48 |
| MsG0380017240.01 | MsG0480023874.01 | 0.843514 | 1.337421e-58 | 2.097470e-55 |
| MsG0380017240.01 | MsG0580024109.01 | 0.898338 | 5.854062e-77 | 6.888125e-73 |
| MsG0380017240.01 | MsG0580024478.01 | 0.831089 | 2.033677e-55 | 2.184174e-52 |
| MsG0380017240.01 | MsG0580024489.01 | 0.844668 | 6.554439e-59 | 1.065829e-55 |
| MsG0380017240.01 | MsG0580024657.01 | 0.804191 | 2.431679e-49 | 1.245815e-46 |
| MsG0380017240.01 | MsG0580024793.01 | 0.805110 | 1.563379e-49 | 8.201694e-47 |
| MsG0380017240.01 | MsG0580024798.01 | 0.819163 | 1.341784e-52 | 1.024625e-49 |
| MsG0380017240.01 | MsG0580024954.01 | 0.820744 | 5.835526e-53 | 4.656472e-50 |
| MsG0380017240.01 | MsG0580025093.01 | 0.841438 | 4.752228e-58 | 6.983309e-55 |
| MsG0380017240.01 | MsG0580025352.01 | 0.858859 | 6.167949e-63 | 1.596907e-59 |
| MsG0380017240.01 | MsG0580025385.01 | 0.863471 | 2.431607e-64 | 7.378869e-61 |
| MsG0380017240.01 | MsG0580025766.01 | 0.831278 | 1.827297e-55 | 1.973490e-52 |
| MsG0380017240.01 | MsG0580026059.01 | 0.803653 | 3.145598e-49 | 1.589453e-46 |
| MsG0380017240.01 | MsG0580026593.01 | 0.835827 | 1.337290e-56 | 1.654491e-53 |
| MsG0380017240.01 | MsG0580027413.01 | 0.809104 | 2.231037e-50 | 1.298323e-47 |
| MsG0380017240.01 | MsG0580027938.01 | 0.838894 | 2.192398e-57 | 2.977475e-54 |
| MsG0380017240.01 | MsG0580028060.01 | 0.892719 | 1.224151e-74 | 1.132076e-70 |
| MsG0380017240.01 | MsG0580028228.01 | 0.853379 | 2.484487e-61 | 5.357605e-58 |
| MsG0380017240.01 | MsG0580028330.01 | 0.842100 | 3.177533e-58 | 4.767060e-55 |
| MsG0380017240.01 | MsG0580028449.01 | 0.833506 | 5.130095e-56 | 5.919780e-53 |
| MsG0380017240.01 | MsG0580028516.01 | 0.805255 | 1.457953e-49 | 7.676844e-47 |
| MsG0380017240.01 | MsG0580028756.01 | 0.819303 | 1.246767e-52 | 9.557440e-50 |
| MsG0380017240.01 | MsG0580029298.01 | 0.846758 | 1.776537e-59 | 3.089660e-56 |
| MsG0380017240.01 | MsG0680030740.01 | 0.822578 | 2.197230e-53 | 1.846640e-50 |
| MsG0380017240.01 | MsG0680030865.01 | 0.805802 | 1.119643e-49 | 5.979293e-47 |
| MsG0380017240.01 | MsG0680031616.01 | 0.844576 | 6.942317e-59 | 1.125727e-55 |
| MsG0380017240.01 | MsG0680033793.01 | 0.829210 | 5.847010e-55 | 5.944912e-52 |
| MsG0380017240.01 | MsG0780036752.01 | 0.855858 | 4.757913e-62 | 1.113906e-58 |
| MsG0380017240.01 | MsG0780036816.01 | 0.805221 | 1.482057e-49 | 7.797084e-47 |
| MsG0380017240.01 | MsG0780038393.01 | 0.803722 | 3.043176e-49 | 1.540458e-46 |
| MsG0380017240.01 | MsG0780038837.01 | 0.832696 | 8.155863e-56 | 9.186643e-53 |
| MsG0380017240.01 | MsG0780039490.01 | 0.806731 | 7.133101e-50 | 3.900846e-47 |
| MsG0380017240.01 | MsG0780039533.01 | 0.804936 | 1.700091e-49 | 8.879771e-47 |
| MsG0380017240.01 | MsG0780039615.01 | 0.822910 | 1.839970e-53 | 1.560879e-50 |
| MsG0380017240.01 | MsG0780039712.01 | 0.801230 | 9.931731e-49 | 4.718205e-46 |
| MsG0380017240.01 | MsG0780039817.01 | 0.836412 | 9.503195e-57 | 1.196645e-53 |
| MsG0380017240.01 | MsG0780040079.01 | 0.823378 | 1.430913e-53 | 1.229840e-50 |
| MsG0380017240.01 | MsG0780040139.01 | 0.815276 | 1.004291e-51 | 6.893410e-49 |
| MsG0380017240.01 | MsG0780040364.01 | 0.858280 | 9.183605e-63 | 2.331456e-59 |
| MsG0380017240.01 | MsG0780040472.01 | 0.807819 | 4.194529e-50 | 2.359571e-47 |
| MsG0380017240.01 | MsG0780040482.01 | 0.841343 | 5.034644e-58 | 7.375293e-55 |
| MsG0380017240.01 | MsG0780040483.01 | 0.804691 | 1.912778e-49 | 9.927163e-47 |
| MsG0380017240.01 | MsG0780040541.01 | 0.824433 | 8.094571e-54 | 7.168311e-51 |
| MsG0380017240.01 | MsG0780040543.01 | 0.847025 | 1.500780e-59 | 2.632347e-56 |
| MsG0380017240.01 | MsG0780040564.01 | 0.914950 | 1.049024e-84 | 2.675904e-80 |
| MsG0380017240.01 | MsG0780040586.01 | 0.844805 | 6.022630e-59 | 9.836511e-56 |
| MsG0380017240.01 | MsG0780040688.01 | 0.811099 | 8.292549e-51 | 5.087466e-48 |
| MsG0380017240.01 | MsG0780040828.01 | 0.834386 | 3.087880e-56 | 3.658854e-53 |
| MsG0380017240.01 | MsG0780040880.01 | 0.858286 | 9.144043e-63 | 2.321907e-59 |
| MsG0380017240.01 | MsG0780041063.01 | 0.820519 | 6.571362e-53 | 5.211040e-50 |
| MsG0380017240.01 | MsG0780041132.01 | 0.802943 | 4.412732e-49 | 2.189502e-46 |
| MsG0380017240.01 | MsG0780041141.01 | 0.819406 | 1.181064e-52 | 9.080379e-50 |
| MsG0380017240.01 | MsG0780041143.01 | 0.804109 | 2.529682e-49 | 1.293320e-46 |
| MsG0380017240.01 | MsG0780041212.01 | 0.812632 | 3.844433e-51 | 2.456966e-48 |
| MsG0380017240.01 | MsG0780041363.01 | 0.861972 | 7.043487e-64 | 2.029197e-60 |
| MsG0380017240.01 | MsG0780041423.01 | 0.800177 | 1.628694e-48 | 7.533310e-46 |
| MsG0380017240.01 | MsG0780041548.01 | 0.826801 | 2.222678e-54 | 2.106132e-51 |
| MsG0380017240.01 | MsG0780041756.01 | 0.843776 | 1.137645e-58 | 1.798819e-55 |
| MsG0380017240.01 | MsG0780041804.01 | 0.810520 | 1.106742e-50 | 6.685665e-48 |
| MsG0380017240.01 | MsG0880042046.01 | 0.817485 | 3.218946e-52 | 2.347248e-49 |
| MsG0380017240.01 | MsG0880042552.01 | 0.818336 | 2.067326e-52 | 1.543161e-49 |
| MsG0380017240.01 | MsG0880042773.01 | 0.839359 | 1.661388e-57 | 2.288861e-54 |
| MsG0380017240.01 | MsG0880042791.01 | 0.854165 | 1.476019e-61 | 3.267508e-58 |
| MsG0380017240.01 | MsG0880042845.01 | 0.854067 | 1.575552e-61 | 3.476627e-58 |
| MsG0380017240.01 | MsG0880042906.01 | 0.858354 | 8.727370e-63 | 2.221014e-59 |
| MsG0380017240.01 | MsG0880042929.01 | 0.848394 | 6.302817e-60 | 1.155002e-56 |
| MsG0380017240.01 | MsG0880043294.01 | 0.826959 | 2.037225e-54 | 1.939480e-51 |
| MsG0380017240.01 | MsG0880043297.01 | 0.846195 | 2.529866e-59 | 4.319899e-56 |
| MsG0380017240.01 | MsG0880043516.01 | 0.840638 | 7.707064e-58 | 1.104642e-54 |
| MsG0380017240.01 | MsG0880044803.01 | 0.868530 | 6.096293e-66 | 2.212840e-62 |
| MsG0380017240.01 | MsG0880044878.01 | 0.818377 | 2.022998e-52 | 1.511887e-49 |
| MsG0380017240.01 | MsG0880045552.01 | 0.814987 | 1.164151e-51 | 7.927986e-49 |
| MsG0380017240.01 | MsG0880045916.01 | 0.827899 | 1.212386e-54 | 1.186241e-51 |
| MsG0380017240.01 | MsG0880046086.01 | 0.854160 | 1.480704e-61 | 3.277388e-58 |
| MsG0380017240.01 | MsG0880046165.01 | 0.860710 | 1.707896e-63 | 4.712707e-60 |
| MsG0380017240.01 | MsG0880046397.01 | 0.801835 | 7.463599e-49 | 3.600381e-46 |
| MsG0380017240.01 | MsG0880046445.01 | 0.822832 | 1.917806e-53 | 1.623409e-50 |
| MsG0380017240.01 | MsG0880046762.01 | 0.801971 | 7.001011e-49 | 3.388649e-46 |
| MsG0380017240.01 | MsG0880046922.01 | 0.842091 | 3.196127e-58 | 4.793474e-55 |
| MsG0380017240.01 | MsG0880046983.01 | 0.820095 | 8.218299e-53 | 6.442112e-50 |
| MsG0380017240.01 | MsG0880047226.01 | 0.872950 | 2.144430e-67 | 9.141685e-64 |
| MsG0380017240.01 | MsG0880047293.01 | 0.854445 | 1.225508e-61 | 2.737385e-58 |
| MsG0380017240.01 | MsG0880047431.01 | 0.801319 | 9.522095e-49 | 4.533838e-46 |
| MsG0380017240.01 | MsG0880047466.01 | 0.837389 | 5.350291e-57 | 6.938769e-54 |
| MsG0380017240.01 | MsG0880047478.01 | 0.807644 | 4.569625e-50 | 2.558819e-47 |
| MsG0280006477.01 | MsG0380017240.01 | 0.822765 | 1.988668e-53 | 1.680161e-50 |
| MsG0280006884.01 | MsG0380017240.01 | 0.804643 | 1.957452e-49 | 1.014622e-46 |
| MsG0280007196.01 | MsG0380017240.01 | 0.831931 | 1.262110e-55 | 1.389893e-52 |
| MsG0280007359.01 | MsG0380017240.01 | 0.812246 | 4.668982e-51 | 2.953447e-48 |
| MsG0280007419.01 | MsG0380017240.01 | 0.882014 | 1.485347e-70 | 8.899875e-67 |
| MsG0280007706.01 | MsG0380017240.01 | 0.827102 | 1.883273e-54 | 1.800289e-51 |
| MsG0280007761.01 | MsG0380017240.01 | 0.855170 | 7.550138e-62 | 1.727474e-58 |
| MsG0280007790.01 | MsG0380017240.01 | 0.839121 | 1.915190e-57 | 2.618916e-54 |
| MsG0280007876.01 | MsG0380017240.01 | 0.802691 | 4.975193e-49 | 2.452830e-46 |
| MsG0280007983.01 | MsG0380017240.01 | 0.877316 | 6.927874e-69 | 3.468414e-65 |
| MsG0280008235.01 | MsG0380017240.01 | 0.839795 | 1.279914e-57 | 1.787008e-54 |
| MsG0280008280.01 | MsG0380017240.01 | 0.820324 | 7.284025e-53 | 5.745088e-50 |
| MsG0280008407.01 | MsG0380017240.01 | 0.804906 | 1.724778e-49 | 9.002034e-47 |
| MsG0280008614.01 | MsG0380017240.01 | 0.821231 | 4.505865e-53 | 3.644853e-50 |
| MsG0280008679.01 | MsG0380017240.01 | 0.818597 | 1.803688e-52 | 1.356013e-49 |
| MsG0280008909.01 | MsG0380017240.01 | 0.802831 | 4.655331e-49 | 2.303508e-46 |
| MsG0280009241.01 | MsG0380017240.01 | 0.867903 | 9.708524e-66 | 3.445711e-62 |
| MsG0280009255.01 | MsG0380017240.01 | 0.804040 | 2.614474e-49 | 1.334350e-46 |
| MsG0280009509.01 | MsG0380017240.01 | 0.827259 | 1.726631e-54 | 1.658363e-51 |
| MsG0280009514.01 | MsG0380017240.01 | 0.812136 | 4.935405e-51 | 3.112502e-48 |
| MsG0280010001.01 | MsG0380017240.01 | 0.878352 | 3.009486e-69 | 1.566455e-65 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680030621.01 | MsG0380017240.01 | PPI |
| MsG0880042124.01 | MsG0380017240.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017240.01.T01 | MTR_3g103500 | 98.578 | 703 | 4 | 3 | 1 | 702 | 1 | 698 | 0.0 | 1415 |
| MsG0380017240.01.T01 | MTR_3g103500 | 97.581 | 496 | 7 | 2 | 1 | 496 | 1 | 491 | 0.0 | 1002 |
| MsG0380017240.01.T01 | MTR_3g109040 | 64.665 | 716 | 210 | 11 | 1 | 702 | 1 | 687 | 0.0 | 907 |
| MsG0380017240.01.T01 | MTR_3g109040 | 65.199 | 704 | 205 | 10 | 10 | 702 | 2 | 676 | 0.0 | 904 |
| MsG0380017240.01.T01 | MTR_4g006010 | 63.194 | 720 | 226 | 7 | 1 | 702 | 1 | 699 | 0.0 | 884 |
| MsG0380017240.01.T01 | MTR_6g007807 | 66.413 | 658 | 185 | 8 | 53 | 701 | 35 | 665 | 0.0 | 849 |
| MsG0380017240.01.T01 | MTR_8g012320 | 66.516 | 663 | 191 | 7 | 46 | 701 | 63 | 701 | 0.0 | 838 |
| MsG0380017240.01.T01 | MTR_1g061510 | 42.125 | 527 | 273 | 5 | 176 | 698 | 19 | 517 | 1.83e-147 | 440 |
| MsG0380017240.01.T01 | MTR_1g061340 | 40.987 | 527 | 279 | 5 | 176 | 698 | 19 | 517 | 4.86e-146 | 436 |
| MsG0380017240.01.T01 | MTR_1g061270 | 41.445 | 526 | 277 | 3 | 176 | 698 | 19 | 516 | 2.43e-145 | 434 |
| MsG0380017240.01.T01 | MTR_1g061280 | 40.490 | 531 | 284 | 5 | 176 | 702 | 19 | 521 | 4.19e-144 | 431 |
| MsG0380017240.01.T01 | MTR_1g492700 | 45.513 | 468 | 226 | 4 | 232 | 698 | 85 | 524 | 5.54e-144 | 431 |
| MsG0380017240.01.T01 | MTR_7g103590 | 41.556 | 527 | 276 | 5 | 176 | 698 | 28 | 526 | 7.91e-144 | 431 |
| MsG0380017240.01.T01 | MTR_4g055520 | 41.746 | 527 | 280 | 7 | 185 | 701 | 33 | 542 | 6.96e-139 | 418 |
| MsG0380017240.01.T01 | MTR_7g101950 | 40.377 | 530 | 285 | 6 | 176 | 701 | 25 | 527 | 6.11e-138 | 416 |
| MsG0380017240.01.T01 | MTR_4g055520 | 46.512 | 430 | 217 | 4 | 185 | 604 | 33 | 459 | 4.30e-135 | 407 |
| MsG0380017240.01.T01 | MTR_4g055520 | 43.304 | 448 | 239 | 4 | 255 | 701 | 29 | 462 | 4.29e-130 | 393 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017240.01.T01 | AT4G07960 | 76.999 | 713 | 139 | 8 | 1 | 702 | 1 | 699 | 0.0 | 1071 |
| MsG0380017240.01.T01 | AT4G07960 | 76.999 | 713 | 139 | 8 | 1 | 702 | 1 | 699 | 0.0 | 1071 |
| MsG0380017240.01.T01 | AT4G31590 | 65.546 | 714 | 212 | 8 | 1 | 702 | 1 | 692 | 0.0 | 927 |
| MsG0380017240.01.T01 | AT2G24630 | 63.675 | 713 | 225 | 7 | 1 | 702 | 1 | 690 | 0.0 | 907 |
| MsG0380017240.01.T01 | AT2G24630 | 63.675 | 713 | 225 | 7 | 1 | 702 | 1 | 690 | 0.0 | 907 |
| MsG0380017240.01.T01 | AT3G28180 | 63.869 | 703 | 201 | 11 | 18 | 702 | 6 | 673 | 0.0 | 861 |
| MsG0380017240.01.T01 | AT3G07330 | 64.253 | 663 | 198 | 7 | 51 | 702 | 48 | 682 | 0.0 | 845 |
| MsG0380017240.01.T01 | AT3G07330 | 64.253 | 663 | 198 | 7 | 51 | 702 | 48 | 682 | 0.0 | 845 |
| MsG0380017240.01.T01 | AT5G22740 | 41.431 | 531 | 279 | 5 | 176 | 701 | 29 | 532 | 6.35e-143 | 429 |
| MsG0380017240.01.T01 | AT5G03760 | 40.755 | 530 | 276 | 5 | 179 | 701 | 32 | 530 | 1.44e-139 | 420 |
| MsG0380017240.01.T01 | AT1G23480 | 40.678 | 531 | 282 | 5 | 176 | 701 | 51 | 553 | 6.83e-139 | 419 |
| MsG0380017240.01.T01 | AT1G23480 | 40.678 | 531 | 282 | 5 | 176 | 701 | 51 | 553 | 6.83e-139 | 419 |
| MsG0380017240.01.T01 | AT2G35650 | 41.199 | 517 | 269 | 5 | 176 | 688 | 51 | 536 | 5.76e-138 | 417 |
| MsG0380017240.01.T01 | AT5G16190 | 40.987 | 527 | 278 | 6 | 176 | 698 | 6 | 503 | 7.76e-137 | 412 |
| MsG0380017240.01.T01 | AT4G13410 | 44.444 | 459 | 245 | 5 | 176 | 630 | 43 | 495 | 1.87e-136 | 412 |
| MsG0380017240.01.T01 | AT1G23480 | 41.223 | 507 | 265 | 5 | 200 | 701 | 3 | 481 | 2.78e-135 | 407 |
| MsG0380017240.01.T01 | AT5G16190 | 45.638 | 447 | 238 | 4 | 176 | 618 | 6 | 451 | 7.02e-135 | 405 |
| MsG0380017240.01.T01 | AT5G16190 | 43.376 | 468 | 235 | 4 | 232 | 698 | 4 | 442 | 3.22e-134 | 403 |
| MsG0380017240.01.T01 | AT1G24070 | 38.621 | 580 | 319 | 8 | 125 | 698 | 3 | 551 | 4.55e-134 | 406 |
| MsG0380017240.01.T01 | AT2G35650 | 43.668 | 458 | 226 | 4 | 232 | 688 | 38 | 464 | 1.00e-133 | 403 |
| MsG0380017240.01.T01 | AT2G35650 | 43.668 | 458 | 226 | 4 | 232 | 688 | 38 | 464 | 1.00e-133 | 403 |
| MsG0380017240.01.T01 | AT3G56000 | 40.377 | 530 | 279 | 6 | 180 | 701 | 26 | 526 | 9.55e-131 | 397 |
| MsG0380017240.01.T01 | AT5G16190 | 38.571 | 560 | 278 | 7 | 176 | 698 | 6 | 536 | 1.12e-129 | 394 |
| MsG0380017240.01.T01 | AT4G16590 | 37.879 | 528 | 259 | 8 | 176 | 698 | 56 | 519 | 2.45e-117 | 362 |
| MsG0380017240.01.T01 | AT1G23480 | 41.205 | 415 | 216 | 2 | 288 | 701 | 21 | 408 | 2.60e-112 | 345 |
| MsG0380017240.01.T01 | AT4G13410 | 47.633 | 338 | 171 | 2 | 294 | 630 | 2 | 334 | 6.28e-110 | 338 |
| MsG0380017240.01.T01 | AT2G35650 | 41.337 | 404 | 206 | 3 | 286 | 688 | 5 | 378 | 2.86e-108 | 334 |
| MsG0380017240.01.T01 | AT4G13410 | 47.516 | 322 | 165 | 3 | 176 | 494 | 43 | 363 | 7.60e-99 | 310 |
| MsG0380017240.01.T01 | AT1G24070 | 42.373 | 413 | 219 | 6 | 125 | 532 | 3 | 401 | 2.12e-98 | 309 |
Find 165 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAATCAAAGATTGTGTAAT+TGG | 0.164344 | 3:+93935310 | None:intergenic |
| CAGCAGCTCTATGAGCTTTA+AGG | 0.164902 | 3:+93936068 | None:intergenic |
| AGTTCATCAATGTCCCAATT+TGG | 0.224089 | 3:+93936196 | None:intergenic |
| TATTGCAGCAGTGTGTAATT+TGG | 0.228223 | 3:-93935383 | MsG0380017240.01.T01:CDS |
| AATTACACAATCTTTGATTA+AGG | 0.236300 | 3:-93935308 | MsG0380017240.01.T01:CDS |
| CTGTAAGCTTCGTAAGATTC+AGG | 0.244033 | 3:+93934496 | None:intergenic |
| GATAGATTGGTTCTTTGTTT+AGG | 0.261285 | 3:-93935656 | MsG0380017240.01.T01:CDS |
| CAAATTGCTCCTGCATTGTT+TGG | 0.262621 | 3:-93936034 | MsG0380017240.01.T01:CDS |
| AAATGGCACCTTTGTTCAAT+TGG | 0.282770 | 3:-93936270 | MsG0380017240.01.T01:CDS |
| CTTGTTGTTCCACTTCAAAA+TGG | 0.290451 | 3:+93934803 | None:intergenic |
| GGGCACCGACATTTGGTGTT+AGG | 0.298422 | 3:-93935793 | MsG0380017240.01.T01:CDS |
| GTCAAACGCCGCGTCGCTTC+TGG | 0.301307 | 3:-93935998 | MsG0380017240.01.T01:CDS |
| TTGGTTGGTCTAGACTTAAT+TGG | 0.308940 | 3:-93933396 | MsG0380017240.01.T01:CDS |
| CATTGAACCCAAAGAAATTA+AGG | 0.311415 | 3:+93934767 | None:intergenic |
| TCTGAAACATCACCACCTTT+TGG | 0.311924 | 3:+93935596 | None:intergenic |
| CTACAGGATAATGACGAATT+AGG | 0.322967 | 3:-93934904 | MsG0380017240.01.T01:intron |
| CTTAATTTCTTTGGGTTCAA+TGG | 0.325307 | 3:-93934766 | MsG0380017240.01.T01:CDS |
| ACTATGAAAGGAAAAGCTTT+TGG | 0.326733 | 3:+93933795 | None:intergenic |
| GCTGTTCGAGCTCATCTTCA+TGG | 0.327528 | 3:-93934661 | MsG0380017240.01.T01:CDS |
| GTGAACAAGTAGACTGAAAA+AGG | 0.332473 | 3:-93933374 | MsG0380017240.01.T01:exon |
| TTTCACATAGCTACAATTCA+TGG | 0.336791 | 3:+93935192 | None:intergenic |
| GAGGACCACTGTGGAGGATA+TGG | 0.337343 | 3:-93934689 | MsG0380017240.01.T01:CDS |
| GATGACCCTCGTTGATGCTT+TGG | 0.351008 | 3:+93933621 | None:intergenic |
| AATAGAGTGAACGAGTAAAA+TGG | 0.354129 | 3:+93933924 | None:intergenic |
| AATGGCACCTTTGTTCAATT+GGG | 0.361924 | 3:-93936269 | MsG0380017240.01.T01:CDS |
| CCGACATGGTGTTCTCAAAT+AGG | 0.365826 | 3:+93933763 | None:intergenic |
| TTGTTTGCCTGATGTCATAA+AGG | 0.368029 | 3:-93934425 | MsG0380017240.01.T01:CDS |
| CATTCTGTTATTTGTCATCA+TGG | 0.368762 | 3:-93933132 | MsG0380017240.01.T01:three_prime_UTR |
| TCTTTCATTTCTTCCAGATC+AGG | 0.374102 | 3:+93933594 | None:intergenic |
| TATTCAGAGTATAGATAGAT+TGG | 0.375619 | 3:-93935669 | MsG0380017240.01.T01:CDS |
| TTTGGGTTCAATGGTACTGC+TGG | 0.378978 | 3:-93934757 | MsG0380017240.01.T01:CDS |
| CAGCAGCATAGATGGCATTC+TGG | 0.380899 | 3:-93934469 | MsG0380017240.01.T01:CDS |
| GATGTTTCAGATCTTGAATC+TGG | 0.386991 | 3:-93935584 | MsG0380017240.01.T01:CDS |
| GATCTTGAATCTGGAGATAA+GGG | 0.389985 | 3:-93935575 | MsG0380017240.01.T01:CDS |
| TTAAGGACGAGGTTCATAAA+TGG | 0.393056 | 3:-93935291 | MsG0380017240.01.T01:CDS |
| GTATTTGAAGGAACTTGCTT+TGG | 0.396618 | 3:-93933511 | MsG0380017240.01.T01:CDS |
| AAGAAATGAAAGAGGAAATC+AGG | 0.399107 | 3:-93933584 | MsG0380017240.01.T01:CDS |
| TCAATGGTACTGCTGGAGTT+TGG | 0.399721 | 3:-93934750 | MsG0380017240.01.T01:CDS |
| AGGGTCATCAGCACCTGATC+TGG | 0.403205 | 3:-93933607 | MsG0380017240.01.T01:CDS |
| ACCTTGGCCTTTATGACATC+AGG | 0.403380 | 3:+93934418 | None:intergenic |
| GGAGACAACAATTTATTTGA+GGG | 0.407140 | 3:-93933234 | MsG0380017240.01.T01:three_prime_UTR |
| ACAGAAAACAGCAGCATAGA+TGG | 0.412430 | 3:-93934477 | MsG0380017240.01.T01:CDS |
| TGATTATGTTATGACCTGTT+TGG | 0.415387 | 3:+93936567 | None:intergenic |
| TGCTCCACATCTTGAATTGT+GGG | 0.424265 | 3:-93935813 | MsG0380017240.01.T01:CDS |
| GAATTGTGGGCACCGACATT+TGG | 0.427447 | 3:-93935800 | MsG0380017240.01.T01:CDS |
| TGCTGGAGTTTGGAGAATAA+AGG | 0.431597 | 3:-93934740 | MsG0380017240.01.T01:CDS |
| ACGCACTTCCTAGCTGGAAT+AGG | 0.438031 | 3:+93933712 | None:intergenic |
| TAATCAAAGATTGTGTAATT+GGG | 0.439751 | 3:+93935311 | None:intergenic |
| AGATAAGGGTTTCTTCCCTA+TGG | 0.441243 | 3:-93935561 | MsG0380017240.01.T01:CDS |
| TTCTATTCATAGAGCCTTGG+TGG | 0.441893 | 3:+93933262 | None:intergenic |
| AGATCTTGAATCTGGAGATA+AGG | 0.445844 | 3:-93935576 | MsG0380017240.01.T01:CDS |
| CTTTCTTGCAGATAAGCATA+TGG | 0.446258 | 3:-93933998 | MsG0380017240.01.T01:intron |
| CAAGGTGTTTCTATGTTTGT+CGG | 0.458917 | 3:-93935888 | MsG0380017240.01.T01:CDS |
| AGTTTGGAGAATAAAGGCTT+TGG | 0.460085 | 3:-93934734 | MsG0380017240.01.T01:CDS |
| AAATTCAATGCTATGATCTC+AGG | 0.461079 | 3:-93933735 | MsG0380017240.01.T01:CDS |
| TGGAGACAACAATTTATTTG+AGG | 0.463348 | 3:-93933235 | MsG0380017240.01.T01:three_prime_UTR |
| CTTAAAGCTCATAGAGCTGC+TGG | 0.464353 | 3:-93936067 | MsG0380017240.01.T01:CDS |
| ATCAGGAGTAGGCTGAAAAT+CGG | 0.466152 | 3:+93935141 | None:intergenic |
| GGCTCTATGAATAGAATCAC+TGG | 0.470527 | 3:-93933255 | MsG0380017240.01.T01:three_prime_UTR |
| TCTTCAAGAGACAAAGGAAA+AGG | 0.476352 | 3:-93936124 | MsG0380017240.01.T01:CDS |
| GTTGAATTGAATTTAGTAGC+TGG | 0.480977 | 3:+93933173 | None:intergenic |
| GGCACCGACATTTGGTGTTA+GGG | 0.481814 | 3:-93935792 | MsG0380017240.01.T01:CDS |
| ATTCGTACGCACTTCCTAGC+TGG | 0.482898 | 3:+93933706 | None:intergenic |
| TGGGACATTGATGAACTTGA+AGG | 0.483005 | 3:-93936190 | MsG0380017240.01.T01:CDS |
| AACAACCCACGCAGGAATCT+CGG | 0.484233 | 3:+93933863 | None:intergenic |
| GTGCTCCACATCTTGAATTG+TGG | 0.487800 | 3:-93935814 | MsG0380017240.01.T01:CDS |
| AGCTAGGAAGTGCGTACGAA+TGG | 0.488925 | 3:-93933704 | MsG0380017240.01.T01:CDS |
| AGAAGCGACGCGGCGTTTGA+CGG | 0.489772 | 3:+93936000 | None:intergenic |
| AAAATTAAACCTGTTCCAAA+AGG | 0.496075 | 3:-93935611 | MsG0380017240.01.T01:CDS |
| TTCTACTTCTTGCTATTCCA+AGG | 0.497931 | 3:-93933432 | MsG0380017240.01.T01:CDS |
| CGGTGGTGTTGGTGGTGGTA+GGG | 0.498109 | 3:-93935954 | MsG0380017240.01.T01:CDS |
| TAAGAAGTCCGGTCGTTCAT+CGG | 0.499552 | 3:-93933673 | MsG0380017240.01.T01:CDS |
| TTTAGTAGTACCTTAAAATG+AGG | 0.500382 | 3:+93935100 | None:intergenic |
| TAGGACTTGTGCAAGCTAGA+TGG | 0.503401 | 3:-93934885 | MsG0380017240.01.T01:CDS |
| CCCCATGTGCAATGAGAAAG+AGG | 0.505230 | 3:-93935525 | MsG0380017240.01.T01:intron |
| CACGCAGGAATCTCGGCCTC+CGG | 0.505996 | 3:+93933870 | None:intergenic |
| ATTAGAGATGGGTACAAAGC+TGG | 0.509776 | 3:-93935229 | MsG0380017240.01.T01:CDS |
| ATCGACGGTGGTGTTGGTGG+TGG | 0.510363 | 3:-93935959 | MsG0380017240.01.T01:CDS |
| ACATAACAAAATGTATTTGA+AGG | 0.516862 | 3:-93933523 | MsG0380017240.01.T01:CDS |
| AAAAGTAAATCTTCTTCAGA+AGG | 0.517692 | 3:+93936166 | None:intergenic |
| GCGGATATCGACGGTGGTGT+TGG | 0.521978 | 3:-93935965 | MsG0380017240.01.T01:CDS |
| TTGAGAAATGACATGACTGC+TGG | 0.523060 | 3:+93933831 | None:intergenic |
| ATCACCCTCCGATGAACGAC+CGG | 0.523064 | 3:+93933665 | None:intergenic |
| ACGGTGGTGTTGGTGGTGGT+AGG | 0.524657 | 3:-93935955 | MsG0380017240.01.T01:CDS |
| CAGCAGTGTGTAATTTGGAT+TGG | 0.524727 | 3:-93935378 | MsG0380017240.01.T01:CDS |
| GGGATCTGAACAAGAACCAT+AGG | 0.528282 | 3:+93935545 | None:intergenic |
| GCAACACCAACTTTCTAAGA+AGG | 0.529828 | 3:+93933946 | None:intergenic |
| CCTCTTTCTCATTGCACATG+GGG | 0.530589 | 3:+93935525 | None:intergenic |
| CGACACCGTGTGATTAGAGA+TGG | 0.531408 | 3:-93935241 | MsG0380017240.01.T01:CDS |
| TGAATTTAGTAGCTGGAGTG+AGG | 0.532020 | 3:+93933180 | None:intergenic |
| GTTCATAAATGGCAAGAAGA+AGG | 0.534334 | 3:-93935280 | MsG0380017240.01.T01:CDS |
| ACCTCTTTCTCATTGCACAT+GGG | 0.534788 | 3:+93935524 | None:intergenic |
| TGATTCTATTCATAGAGCCT+TGG | 0.536139 | 3:+93933259 | None:intergenic |
| TTCGAGCTCATCTTCATGGA+TGG | 0.538595 | 3:-93934657 | MsG0380017240.01.T01:CDS |
| CAAAGGCGAAACAATTGCAT+TGG | 0.541740 | 3:+93934445 | None:intergenic |
| AGAACCCTACAGTGAAAAGT+AGG | 0.543807 | 3:-93935925 | MsG0380017240.01.T01:CDS |
| AGGAGATACGGTACTATGAA+AGG | 0.544564 | 3:+93933783 | None:intergenic |
| AAGCTGGTGGTTGGTTGGAG+AGG | 0.544703 | 3:-93934708 | MsG0380017240.01.T01:CDS |
| AGGAGTCTACTTTCAGCTCA+AGG | 0.545457 | 3:-93933462 | MsG0380017240.01.T01:CDS |
| GCTAGGAAGTGCGTACGAAT+GGG | 0.547002 | 3:-93933703 | MsG0380017240.01.T01:CDS |
| TACCTCTTTCTCATTGCACA+TGG | 0.547325 | 3:+93935523 | None:intergenic |
| GATATCGACGGTGGTGTTGG+TGG | 0.547514 | 3:-93935962 | MsG0380017240.01.T01:CDS |
| ATGGCACCTTTGTTCAATTG+GGG | 0.552161 | 3:-93936268 | MsG0380017240.01.T01:CDS |
| ATAAAGGCTTTGGAAGAAGC+TGG | 0.554855 | 3:-93934724 | MsG0380017240.01.T01:CDS |
| TTCTTAAGGAAATCAGGAGT+AGG | 0.558894 | 3:+93935130 | None:intergenic |
| TGGGTAGTCACTAAGAAGTC+CGG | 0.559717 | 3:-93933684 | MsG0380017240.01.T01:CDS |
| TGATCTGGAAGAAATGAAAG+AGG | 0.560195 | 3:-93933592 | MsG0380017240.01.T01:CDS |
| GGAAGAAGCTGGTGGTTGGT+TGG | 0.560517 | 3:-93934713 | MsG0380017240.01.T01:CDS |
| GTGTTCTCAAATAGGAGATA+CGG | 0.560798 | 3:+93933771 | None:intergenic |
| ACAATCTTTGATTAAGGACG+AGG | 0.563412 | 3:-93935302 | MsG0380017240.01.T01:CDS |
| CTTTGGAAGAAGCTGGTGGT+TGG | 0.566030 | 3:-93934717 | MsG0380017240.01.T01:CDS |
| GAAGTCCGGTCGTTCATCGG+AGG | 0.568647 | 3:-93933670 | MsG0380017240.01.T01:CDS |
| GCCTGATGTCATAAAGGCCA+AGG | 0.569837 | 3:-93934419 | MsG0380017240.01.T01:intron |
| ATTAAACCTGTTCCAAAAGG+TGG | 0.570493 | 3:-93935608 | MsG0380017240.01.T01:CDS |
| TCCCATGACAATGTTCGTAC+CGG | 0.571170 | 3:-93933889 | MsG0380017240.01.T01:CDS |
| GGAGTCTACTTTCAGCTCAA+GGG | 0.571457 | 3:-93933461 | MsG0380017240.01.T01:CDS |
| AAAACGCTAAACAACTCACA+TGG | 0.573149 | 3:-93936099 | MsG0380017240.01.T01:CDS |
| CTCCGGTACGAACATTGTCA+TGG | 0.573525 | 3:+93933887 | None:intergenic |
| AATTCTTCTTCAAGAGACAA+AGG | 0.578590 | 3:-93936130 | MsG0380017240.01.T01:CDS |
| GGAGGCCGAGATTCCTGCGT+GGG | 0.590482 | 3:-93933868 | MsG0380017240.01.T01:CDS |
| GAAACTAAACCAAACAATGC+AGG | 0.595411 | 3:+93936025 | None:intergenic |
| TTTGTGAGAAATTGCAAAGG+AGG | 0.595685 | 3:+93935713 | None:intergenic |
| AAGTCCGGTCGTTCATCGGA+GGG | 0.596120 | 3:-93933669 | MsG0380017240.01.T01:CDS |
| TAGGTTCTATACATTCATCA+AGG | 0.599235 | 3:-93935906 | MsG0380017240.01.T01:CDS |
| TACACGATGAATTATATACA+TGG | 0.601040 | 3:-93933301 | MsG0380017240.01.T01:three_prime_UTR |
| TCCGGTACGAACATTGTCAT+GGG | 0.602923 | 3:+93933888 | None:intergenic |
| TTCGCACCCCAATTGAACAA+AGG | 0.603697 | 3:+93936262 | None:intergenic |
| AGAGGAAATCAGGAGACAAG+AGG | 0.607350 | 3:-93933574 | MsG0380017240.01.T01:CDS |
| ACGGTGTCGGTACAAAATGT+TGG | 0.614765 | 3:+93935255 | None:intergenic |
| GGTGCCCACAATTCAAGATG+TGG | 0.618003 | 3:+93935809 | None:intergenic |
| CATGACAATGTTCGTACCGG+AGG | 0.621883 | 3:-93933886 | MsG0380017240.01.T01:CDS |
| ATCTCAGGCCTATTCCAGCT+AGG | 0.627956 | 3:-93933720 | MsG0380017240.01.T01:CDS |
| AGCGACGCGGCGTTTGACGG+CGG | 0.631539 | 3:+93936003 | None:intergenic |
| AAGATTCAGGTAACTCACAT+TGG | 0.636142 | 3:+93934509 | None:intergenic |
| GGATCTGAACAAGAACCATA+GGG | 0.636957 | 3:+93935546 | None:intergenic |
| TGAGAAATGACATGACTGCT+GGG | 0.640975 | 3:+93933832 | None:intergenic |
| GCAGTACCTCCACATCATTG+AGG | 0.643002 | 3:+93934623 | None:intergenic |
| TTATGACATCAGGCAAACAA+AGG | 0.646531 | 3:+93934428 | None:intergenic |
| AGAACCGACGCGGATATCGA+CGG | 0.646947 | 3:-93935974 | MsG0380017240.01.T01:CDS |
| AGGATGAGAATCTTCTAACA+AGG | 0.648818 | 3:-93934849 | MsG0380017240.01.T01:CDS |
| CGGTTCTACCAGAAGCGACG+CGG | 0.649354 | 3:+93935990 | None:intergenic |
| TGATGACGGTGAGAGACGCG+TGG | 0.660150 | 3:+93936424 | None:intergenic |
| CCTATTTGAGAACACCATGT+CGG | 0.660812 | 3:-93933763 | MsG0380017240.01.T01:CDS |
| GACACCGTGTGATTAGAGAT+GGG | 0.666771 | 3:-93935240 | MsG0380017240.01.T01:CDS |
| CGCTTCTGGTAGAACCGACG+CGG | 0.667172 | 3:-93935984 | MsG0380017240.01.T01:CDS |
| GCATTTGTGAGAAATTGCAA+AGG | 0.670287 | 3:+93935710 | None:intergenic |
| GTTGGAGAGGACCACTGTGG+AGG | 0.676327 | 3:-93934695 | MsG0380017240.01.T01:CDS |
| AAAGCAAGGGTGCACCACCA+AGG | 0.677895 | 3:-93933276 | MsG0380017240.01.T01:three_prime_UTR |
| CATCTCTAATCACACGGTGT+CGG | 0.680410 | 3:+93935242 | None:intergenic |
| TGTACCCATCTCTAATCACA+CGG | 0.680975 | 3:+93935236 | None:intergenic |
| ACATCCCTAACACCAAATGT+CGG | 0.680982 | 3:+93935788 | None:intergenic |
| AAACGCTAAACAACTCACAT+GGG | 0.684108 | 3:-93936098 | MsG0380017240.01.T01:CDS |
| TGACGGTGAGAGACGCGTGG+AGG | 0.700350 | 3:+93936427 | None:intergenic |
| ACCACCGTCGATATCCGCGT+CGG | 0.706571 | 3:+93935970 | None:intergenic |
| AAGGCTTTGGAAGAAGCTGG+TGG | 0.707444 | 3:-93934721 | MsG0380017240.01.T01:CDS |
| ATGAAAACGAGAAATGATGA+CGG | 0.708462 | 3:+93936410 | None:intergenic |
| ATATAACAAACAACCCACGC+AGG | 0.712609 | 3:+93933855 | None:intergenic |
| CGGAGGCCGAGATTCCTGCG+TGG | 0.712962 | 3:-93933869 | MsG0380017240.01.T01:CDS |
| AGAAACCAAAGCATCAACGA+GGG | 0.719081 | 3:-93933626 | MsG0380017240.01.T01:CDS |
| GGTGCGAAAGAAAGTCACAA+AGG | 0.727517 | 3:-93936247 | MsG0380017240.01.T01:CDS |
| AAGTCACAAAGGAACACCAG+TGG | 0.729436 | 3:-93936236 | MsG0380017240.01.T01:CDS |
| GAGAAACCAAAGCATCAACG+AGG | 0.730620 | 3:-93933627 | MsG0380017240.01.T01:CDS |
| TTGGTTGGAGAGGACCACTG+TGG | 0.738638 | 3:-93934698 | MsG0380017240.01.T01:CDS |
| ACCGACGCGGATATCGACGG+TGG | 0.749510 | 3:-93935971 | MsG0380017240.01.T01:CDS |
| AATGTCCATATCCTCCACAG+TGG | 0.778249 | 3:+93934684 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAATTAGAAAAAAAAAG+AGG | + | Chr3:93936466-93936485 | None:intergenic | 15.0% |
| !! | AATTAATATTTGATTGGATT+TGG | - | Chr3:93934577-93934596 | MsG0380017240.01.T01:intron | 15.0% |
| !! | ATGAATTAGAAAAAAAAAGA+GGG | + | Chr3:93936465-93936484 | None:intergenic | 15.0% |
| !!! | AATTGATTGATGATTAATTT+AGG | - | Chr3:93934443-93934462 | MsG0380017240.01.T01:CDS | 15.0% |
| !!! | AATTTTCTTACAAAAAAGAA+TGG | + | Chr3:93936524-93936543 | None:intergenic | 15.0% |
| !!! | TTCATTTTTGTAATTTTATG+TGG | - | Chr3:93936480-93936499 | MsG0380017240.01.T01:five_prime_UTR | 15.0% |
| !!! | TTTTGTTGTTATGTTTTTTA+AGG | - | Chr3:93934103-93934122 | MsG0380017240.01.T01:intron | 15.0% |
| !! | AATTACACAATCTTTGATTA+AGG | - | Chr3:93934214-93934233 | MsG0380017240.01.T01:intron | 20.0% |
| !! | ACAAAAATAGTAGTAATAAC+TGG | - | Chr3:93936175-93936194 | MsG0380017240.01.T01:CDS | 20.0% |
| !! | ACATAACAAAATGTATTTGA+AGG | - | Chr3:93935999-93936018 | MsG0380017240.01.T01:CDS | 20.0% |
| !! | AGATAAACAAAACAAACATT+TGG | + | Chr3:93934949-93934968 | None:intergenic | 20.0% |
| !! | ATCGAAATTACCAAAAAAAA+AGG | - | Chr3:93935229-93935248 | MsG0380017240.01.T01:CDS | 20.0% |
| !! | TAATCAAAGATTGTGTAATT+GGG | + | Chr3:93934214-93934233 | None:intergenic | 20.0% |
| !! | TTAATCAAAGATTGTGTAAT+TGG | + | Chr3:93934215-93934234 | None:intergenic | 20.0% |
| !!! | AAATCACACAAATTTTTTTC+TGG | + | Chr3:93933216-93933235 | None:intergenic | 20.0% |
| !!! | AATCACACAAATTTTTTTCT+GGG | + | Chr3:93933215-93933234 | None:intergenic | 20.0% |
| !!! | AATGTTTGTTTTGTTTATCT+TGG | - | Chr3:93934949-93934968 | MsG0380017240.01.T01:intron | 20.0% |
| !!! | ATTGATAAAGAAGATTTTGA+GGG | - | Chr3:93936413-93936432 | MsG0380017240.01.T01:five_prime_UTR | 20.0% |
| !!! | CTTTTTTGTAAGAAAATTTG+CGG | - | Chr3:93936526-93936545 | MsG0380017240.01.T01:five_prime_UTR | 20.0% |
| !!! | GTGTTTTGTTAGTAATTTTA+CGG | + | Chr3:93935368-93935387 | None:intergenic | 20.0% |
| !!! | TGAATCAAAAAATTGGATTT+TGG | + | Chr3:93934170-93934189 | None:intergenic | 20.0% |
| !!! | TTTATGTATGCCTTTTTTTT+TGG | + | Chr3:93935242-93935261 | None:intergenic | 20.0% |
| !!! | TTTTTCTGGGTTTTTTTTTT+GGG | + | Chr3:93933202-93933221 | None:intergenic | 20.0% |
| !!! | TTTTTTCTGGGTTTTTTTTT+TGG | + | Chr3:93933203-93933222 | None:intergenic | 20.0% |
| ! | AAAAATGGAGAATCCAAATT+GGG | - | Chr3:93933313-93933332 | MsG0380017240.01.T01:three_prime_UTR | 25.0% |
| ! | AAAAGTAAATCTTCTTCAGA+AGG | + | Chr3:93933359-93933378 | None:intergenic | 25.0% |
| ! | AAAATTAAACCTGTTCCAAA+AGG | - | Chr3:93933911-93933930 | MsG0380017240.01.T01:CDS | 25.0% |
| ! | AAACAAAATTTCCATGAGAA+GGG | + | Chr3:93935152-93935171 | None:intergenic | 25.0% |
| ! | CAGAACTTGAATCAAAAAAT+TGG | + | Chr3:93934177-93934196 | None:intergenic | 25.0% |
| ! | TAAAAATGGAGAATCCAAAT+TGG | - | Chr3:93933312-93933331 | MsG0380017240.01.T01:three_prime_UTR | 25.0% |
| ! | TACACGATGAATTATATACA+TGG | - | Chr3:93936221-93936240 | MsG0380017240.01.T01:CDS | 25.0% |
| ! | TATATACATGGAAAAAGCAA+GGG | - | Chr3:93936233-93936252 | MsG0380017240.01.T01:CDS | 25.0% |
| ! | TATTCAGAGTATAGATAGAT+TGG | - | Chr3:93933853-93933872 | MsG0380017240.01.T01:CDS | 25.0% |
| ! | TGTTTCTTTAATCTAGACTA+CGG | - | Chr3:93935405-93935424 | MsG0380017240.01.T01:intron | 25.0% |
| ! | TTATATACATGGAAAAAGCA+AGG | - | Chr3:93936232-93936251 | MsG0380017240.01.T01:CDS | 25.0% |
| ! | TTTAGTAGTACCTTAAAATG+AGG | + | Chr3:93934425-93934444 | None:intergenic | 25.0% |
| !! | AGTGTTTTCCTTAATTTCTT+TGG | - | Chr3:93934747-93934766 | MsG0380017240.01.T01:CDS | 25.0% |
| !! | GATTGATAAAGAAGATTTTG+AGG | - | Chr3:93936412-93936431 | MsG0380017240.01.T01:five_prime_UTR | 25.0% |
| !! | GTGTTTTCCTTAATTTCTTT+GGG | - | Chr3:93934748-93934767 | MsG0380017240.01.T01:CDS | 25.0% |
| !! | GTTCAAAACTTTTTATTGTC+AGG | - | Chr3:93936548-93936567 | MsG0380017240.01.T01:five_prime_UTR | 25.0% |
| !!! | CAATTTTTTGATTCAAGTTC+TGG | - | Chr3:93934175-93934194 | MsG0380017240.01.T01:intron | 25.0% |
| !!! | TCTCTTGAAGAAGAATTTTT+TGG | + | Chr3:93933389-93933408 | None:intergenic | 25.0% |
| !!! | TTCTTTGTTTAGGATGTTTT+TGG | - | Chr3:93933876-93933895 | MsG0380017240.01.T01:CDS | 25.0% |
| !!! | TTGTTGCTTATTTTAAAGGT+TGG | - | Chr3:93933678-93933697 | MsG0380017240.01.T01:CDS | 25.0% |
| !!! | TTTTGTTTGAGACATCATTT+TGG | - | Chr3:93935164-93935183 | MsG0380017240.01.T01:CDS | 25.0% |
| AAATTCAATGCTATGATCTC+AGG | - | Chr3:93935787-93935806 | MsG0380017240.01.T01:CDS | 30.0% | |
| AAGAAATGAAAGAGGAAATC+AGG | - | Chr3:93935938-93935957 | MsG0380017240.01.T01:CDS | 30.0% | |
| AATAGAGTGAACGAGTAAAA+TGG | + | Chr3:93935601-93935620 | None:intergenic | 30.0% | |
| AATTCTTCTTCAAGAGACAA+AGG | - | Chr3:93933392-93933411 | MsG0380017240.01.T01:CDS | 30.0% | |
| ATGAAAACGAGAAATGATGA+CGG | + | Chr3:93933115-93933134 | None:intergenic | 30.0% | |
| CAAACAAAATTTCCATGAGA+AGG | + | Chr3:93935153-93935172 | None:intergenic | 30.0% | |
| CATTGAACCCAAAGAAATTA+AGG | + | Chr3:93934758-93934777 | None:intergenic | 30.0% | |
| CGAAAAACAATTGTGACATT+CGG | + | Chr3:93933055-93933074 | None:intergenic | 30.0% | |
| GGAGACAACAATTTATTTGA+GGG | - | Chr3:93936288-93936307 | MsG0380017240.01.T01:exon | 30.0% | |
| GTTGAATTGAATTTAGTAGC+TGG | + | Chr3:93936352-93936371 | None:intergenic | 30.0% | |
| TAGGTTCTATACATTCATCA+AGG | - | Chr3:93933616-93933635 | MsG0380017240.01.T01:CDS | 30.0% | |
| TATGTGTATCTCAATTCTCA+AGG | - | Chr3:93935126-93935145 | MsG0380017240.01.T01:CDS | 30.0% | |
| TGATTATGTTATGACCTGTT+TGG | + | Chr3:93932958-93932977 | None:intergenic | 30.0% | |
| TGGAGACAACAATTTATTTG+AGG | - | Chr3:93936287-93936306 | MsG0380017240.01.T01:exon | 30.0% | |
| TGTTACAGTTGTGCTTATTA+TGG | - | Chr3:93935482-93935501 | MsG0380017240.01.T01:intron | 30.0% | |
| TTTCACATAGCTACAATTCA+TGG | + | Chr3:93934333-93934352 | None:intergenic | 30.0% | |
| ! | AACTTTTTATTGTCAGGAAC+AGG | - | Chr3:93936554-93936573 | MsG0380017240.01.T01:five_prime_UTR | 30.0% |
| ! | AATGAGGAACAGTTTTCTTA+AGG | + | Chr3:93934409-93934428 | None:intergenic | 30.0% |
| ! | ACAGTTTTCTTAAGGAAATC+AGG | + | Chr3:93934401-93934420 | None:intergenic | 30.0% |
| ! | ACTATGAAAGGAAAAGCTTT+TGG | + | Chr3:93935730-93935749 | None:intergenic | 30.0% |
| ! | ATGTGGATTCTTTTTCTCAA+TGG | - | Chr3:93936497-93936516 | MsG0380017240.01.T01:five_prime_UTR | 30.0% |
| ! | ATTCATTTTCCTCAATGATG+TGG | - | Chr3:93934890-93934909 | MsG0380017240.01.T01:CDS | 30.0% |
| ! | ATTGAATTTTGTAACCGACA+TGG | + | Chr3:93935776-93935795 | None:intergenic | 30.0% |
| ! | CATTCTGTTATTTGTCATCA+TGG | - | Chr3:93936390-93936409 | MsG0380017240.01.T01:five_prime_UTR | 30.0% |
| ! | CTTAATTTCTTTGGGTTCAA+TGG | - | Chr3:93934756-93934775 | MsG0380017240.01.T01:CDS | 30.0% |
| ! | CTTTTTCCTTCTTAGAAAGT+TGG | - | Chr3:93935570-93935589 | MsG0380017240.01.T01:CDS | 30.0% |
| ! | GAAAACTGTTCCTCATTTTA+AGG | - | Chr3:93934412-93934431 | MsG0380017240.01.T01:intron | 30.0% |
| ! | GATAGATTGGTTCTTTGTTT+AGG | - | Chr3:93933866-93933885 | MsG0380017240.01.T01:CDS | 30.0% |
| ! | GTTGTGCTTATTATGGATTA+TGG | - | Chr3:93935489-93935508 | MsG0380017240.01.T01:intron | 30.0% |
| !!! | GAGGTTGTTGCTTATTTTAA+AGG | - | Chr3:93933674-93933693 | MsG0380017240.01.T01:CDS | 30.0% |
| !!! | TGATTGGTTTTATGCTAGAT+GGG | - | Chr3:93933760-93933779 | MsG0380017240.01.T01:CDS | 30.0% |
| !!! | TTGATTGGTTTTATGCTAGA+TGG | - | Chr3:93933759-93933778 | MsG0380017240.01.T01:CDS | 30.0% |
| AAAACGCTAAACAACTCACA+TGG | - | Chr3:93933423-93933442 | MsG0380017240.01.T01:CDS | 35.0% | |
| AAACGCTAAACAACTCACAT+GGG | - | Chr3:93933424-93933443 | MsG0380017240.01.T01:CDS | 35.0% | |
| AAATGGCACCTTTGTTCAAT+TGG | - | Chr3:93933252-93933271 | MsG0380017240.01.T01:three_prime_UTR | 35.0% | |
| AAATGTGTGAGACGTTGTTA+CGG | - | Chr3:93935192-93935211 | MsG0380017240.01.T01:CDS | 35.0% | |
| AACACCAGTGGTTGTAAAAA+TGG | - | Chr3:93933298-93933317 | MsG0380017240.01.T01:three_prime_UTR | 35.0% | |
| AAGATTCAGGTAACTCACAT+TGG | + | Chr3:93935016-93935035 | None:intergenic | 35.0% | |
| AATGGCACCTTTGTTCAATT+GGG | - | Chr3:93933253-93933272 | MsG0380017240.01.T01:three_prime_UTR | 35.0% | |
| ACAACGTGACAAACTAACAA+AGG | + | Chr3:93935270-93935289 | None:intergenic | 35.0% | |
| ACAATCTTTGATTAAGGACG+AGG | - | Chr3:93934220-93934239 | MsG0380017240.01.T01:intron | 35.0% | |
| AGATCTTGAATCTGGAGATA+AGG | - | Chr3:93933946-93933965 | MsG0380017240.01.T01:CDS | 35.0% | |
| AGGATGAGAATCTTCTAACA+AGG | - | Chr3:93934673-93934692 | MsG0380017240.01.T01:CDS | 35.0% | |
| AGTTCATCAATGTCCCAATT+TGG | + | Chr3:93933329-93933348 | None:intergenic | 35.0% | |
| AGTTTGGAGAATAAAGGCTT+TGG | - | Chr3:93934788-93934807 | MsG0380017240.01.T01:CDS | 35.0% | |
| ATTAAACCTGTTCCAAAAGG+TGG | - | Chr3:93933914-93933933 | MsG0380017240.01.T01:CDS | 35.0% | |
| CACTGGAAACATTAACAACT+TGG | + | Chr3:93934993-93935012 | None:intergenic | 35.0% | |
| CCAAAAAGAAAGATACTCCT+TGG | + | Chr3:93936110-93936129 | None:intergenic | 35.0% | |
| CGTGTAGCTTCAAGAAATTA+TGG | - | Chr3:93934517-93934536 | MsG0380017240.01.T01:intron | 35.0% | |
| CTACAGGATAATGACGAATT+AGG | - | Chr3:93934618-93934637 | MsG0380017240.01.T01:intron | 35.0% | |
| CTTTCTTGCAGATAAGCATA+TGG | - | Chr3:93935524-93935543 | MsG0380017240.01.T01:intron | 35.0% | |
| GAAACTAAACCAAACAATGC+AGG | + | Chr3:93933500-93933519 | None:intergenic | 35.0% | |
| GAATTGAGATACACATACCT+TGG | + | Chr3:93935123-93935142 | None:intergenic | 35.0% | |
| GATCTTGAATCTGGAGATAA+GGG | - | Chr3:93933947-93933966 | MsG0380017240.01.T01:CDS | 35.0% | |
| GATGTTTCAGATCTTGAATC+TGG | - | Chr3:93933938-93933957 | MsG0380017240.01.T01:CDS | 35.0% | |
| GCATTTGTGAGAAATTGCAA+AGG | + | Chr3:93933815-93933834 | None:intergenic | 35.0% | |
| GTAGCTTCAAGAAATTATGG+TGG | - | Chr3:93934520-93934539 | MsG0380017240.01.T01:intron | 35.0% | |
| GTGAACAAGTAGACTGAAAA+AGG | - | Chr3:93936148-93936167 | MsG0380017240.01.T01:CDS | 35.0% | |
| GTGTTCTCAAATAGGAGATA+CGG | + | Chr3:93935754-93935773 | None:intergenic | 35.0% | |
| GTTCATAAATGGCAAGAAGA+AGG | - | Chr3:93934242-93934261 | MsG0380017240.01.T01:intron | 35.0% | |
| TACGAGATCAGAGACAAAAA+TGG | - | Chr3:93933235-93933254 | MsG0380017240.01.T01:three_prime_UTR | 35.0% | |
| TATTGCAGCAGTGTGTAATT+TGG | - | Chr3:93934139-93934158 | MsG0380017240.01.T01:intron | 35.0% | |
| TCTTCAAGAGACAAAGGAAA+AGG | - | Chr3:93933398-93933417 | MsG0380017240.01.T01:CDS | 35.0% | |
| TCTTTCATTTCTTCCAGATC+AGG | + | Chr3:93935931-93935950 | None:intergenic | 35.0% | |
| TGATCTGGAAGAAATGAAAG+AGG | - | Chr3:93935930-93935949 | MsG0380017240.01.T01:CDS | 35.0% | |
| TGATTCTATTCATAGAGCCT+TGG | + | Chr3:93936266-93936285 | None:intergenic | 35.0% | |
| TGGTAATTTCGATGCATTCA+GGG | + | Chr3:93935222-93935241 | None:intergenic | 35.0% | |
| TTAAGGACGAGGTTCATAAA+TGG | - | Chr3:93934231-93934250 | MsG0380017240.01.T01:intron | 35.0% | |
| TTATGACATCAGGCAAACAA+AGG | + | Chr3:93935097-93935116 | None:intergenic | 35.0% | |
| TTCTTAAGGAAATCAGGAGT+AGG | + | Chr3:93934395-93934414 | None:intergenic | 35.0% | |
| TTGTTTGCCTGATGTCATAA+AGG | - | Chr3:93935097-93935116 | MsG0380017240.01.T01:intron | 35.0% | |
| TTTGTGAGAAATTGCAAAGG+AGG | + | Chr3:93933812-93933831 | None:intergenic | 35.0% | |
| ! | CAAGGTGTTTCTATGTTTGT+CGG | - | Chr3:93933634-93933653 | MsG0380017240.01.T01:CDS | 35.0% |
| ! | GGTGGATGTGTCATATATTT+TGG | - | Chr3:93934538-93934557 | MsG0380017240.01.T01:intron | 35.0% |
| ! | GTATTTGAAGGAACTTGCTT+TGG | - | Chr3:93936011-93936030 | MsG0380017240.01.T01:CDS | 35.0% |
| ! | TACTTTTAACAGCTTCAGCA+AGG | - | Chr3:93936040-93936059 | MsG0380017240.01.T01:CDS | 35.0% |
| ! | TAGATGGTCTTTTGTGAACA+AGG | - | Chr3:93934653-93934672 | MsG0380017240.01.T01:CDS | 35.0% |
| ! | TTGGTAATTTCGATGCATTC+AGG | + | Chr3:93935223-93935242 | None:intergenic | 35.0% |
| !! | AGAACCTACTTTTCACTGTA+GGG | + | Chr3:93933604-93933623 | None:intergenic | 35.0% |
| !! | CTTGTTGTTCCACTTCAAAA+TGG | + | Chr3:93934722-93934741 | None:intergenic | 35.0% |
| !! | GGAGTATCTTTCTTTTTGGT+TGG | - | Chr3:93936111-93936130 | MsG0380017240.01.T01:CDS | 35.0% |
| !! | GGTGTTTTTGTTGTGTTTTG+AGG | - | Chr3:93933655-93933674 | MsG0380017240.01.T01:CDS | 35.0% |
| !! | GTGTTAGGGATGTTTTTGAT+TGG | - | Chr3:93933744-93933763 | MsG0380017240.01.T01:CDS | 35.0% |
| !! | TAGAACCTACTTTTCACTGT+AGG | + | Chr3:93933605-93933624 | None:intergenic | 35.0% |
| !! | TCTGTGTTTCCATTTTGAAG+TGG | - | Chr3:93934710-93934729 | MsG0380017240.01.T01:CDS | 35.0% |
| !! | TTCTACTTCTTGCTATTCCA+AGG | - | Chr3:93936090-93936109 | MsG0380017240.01.T01:CDS | 35.0% |
| !! | TTCTCCATTTTTACAACCAC+TGG | + | Chr3:93933305-93933324 | None:intergenic | 35.0% |
| !! | TTGGTTGGTCTAGACTTAAT+TGG | - | Chr3:93936126-93936145 | MsG0380017240.01.T01:CDS | 35.0% |
| !!! | CCAAGGAGTATCTTTCTTTT+TGG | - | Chr3:93936107-93936126 | MsG0380017240.01.T01:CDS | 35.0% |
| !!! | GTTAGTTTGTCACGTTGTTT+TGG | - | Chr3:93935272-93935291 | MsG0380017240.01.T01:CDS | 35.0% |
| ACAGAAAACAGCAGCATAGA+TGG | - | Chr3:93935045-93935064 | MsG0380017240.01.T01:intron | 40.0% | |
| ACATCCCTAACACCAAATGT+CGG | + | Chr3:93933737-93933756 | None:intergenic | 40.0% | |
| ACCTCTTTCTCATTGCACAT+GGG | + | Chr3:93934001-93934020 | None:intergenic | 40.0% | |
| AGAACCCTACAGTGAAAAGT+AGG | - | Chr3:93933597-93933616 | MsG0380017240.01.T01:CDS | 40.0% | |
| AGATAAGGGTTTCTTCCCTA+TGG | - | Chr3:93933961-93933980 | MsG0380017240.01.T01:CDS | 40.0% | |
| AGGAGATACGGTACTATGAA+AGG | + | Chr3:93935742-93935761 | None:intergenic | 40.0% | |
| ATATAACAAACAACCCACGC+AGG | + | Chr3:93935670-93935689 | None:intergenic | 40.0% | |
| ATCAGGAGTAGGCTGAAAAT+CGG | + | Chr3:93934384-93934403 | None:intergenic | 40.0% | |
| ATGGCACCTTTGTTCAATTG+GGG | - | Chr3:93933254-93933273 | MsG0380017240.01.T01:three_prime_UTR | 40.0% | |
| ATTAGAGATGGGTACAAAGC+TGG | - | Chr3:93934293-93934312 | MsG0380017240.01.T01:intron | 40.0% | |
| CAAAGGCGAAACAATTGCAT+TGG | + | Chr3:93935080-93935099 | None:intergenic | 40.0% | |
| CAAATTGCTCCTGCATTGTT+TGG | - | Chr3:93933488-93933507 | MsG0380017240.01.T01:CDS | 40.0% | |
| CAGCAGTGTGTAATTTGGAT+TGG | - | Chr3:93934144-93934163 | MsG0380017240.01.T01:intron | 40.0% | |
| CCTATTTGAGAACACCATGT+CGG | - | Chr3:93935759-93935778 | MsG0380017240.01.T01:CDS | 40.0% | |
| CTGTAAGCTTCGTAAGATTC+AGG | + | Chr3:93935029-93935048 | None:intergenic | 40.0% | |
| GGATCTGAACAAGAACCATA+GGG | + | Chr3:93933979-93933998 | None:intergenic | 40.0% | |
| GGCTCTATGAATAGAATCAC+TGG | - | Chr3:93936267-93936286 | MsG0380017240.01.T01:CDS | 40.0% | |
| GTTATGACCTGTTTGGATGT+AGG | + | Chr3:93932951-93932970 | None:intergenic | 40.0% | |
| TACCTCTTTCTCATTGCACA+TGG | + | Chr3:93934002-93934021 | None:intergenic | 40.0% | |
| TGAATTTAGTAGCTGGAGTG+AGG | + | Chr3:93936345-93936364 | None:intergenic | 40.0% | |
| TGAGAAATGACATGACTGCT+GGG | + | Chr3:93935693-93935712 | None:intergenic | 40.0% | |
| TGATTGGATTTGGATCCACT+TGG | - | Chr3:93934587-93934606 | MsG0380017240.01.T01:intron | 40.0% | |
| TGCTCCACATCTTGAATTGT+GGG | - | Chr3:93933709-93933728 | MsG0380017240.01.T01:CDS | 40.0% | |
| TGCTGGAGTTTGGAGAATAA+AGG | - | Chr3:93934782-93934801 | MsG0380017240.01.T01:CDS | 40.0% | |
| TGGGACATTGATGAACTTGA+AGG | - | Chr3:93933332-93933351 | MsG0380017240.01.T01:three_prime_UTR | 40.0% | |
| TGTACCCATCTCTAATCACA+CGG | + | Chr3:93934289-93934308 | None:intergenic | 40.0% | |
| TTCTATTCATAGAGCCTTGG+TGG | + | Chr3:93936263-93936282 | None:intergenic | 40.0% | |
| TTGAGAAATGACATGACTGC+TGG | + | Chr3:93935694-93935713 | None:intergenic | 40.0% | |
| ! | AGAAACCAAAGCATCAACGA+GGG | - | Chr3:93935896-93935915 | MsG0380017240.01.T01:CDS | 40.0% |
| ! | CATTTTCCTCAATGATGTGG+AGG | - | Chr3:93934893-93934912 | MsG0380017240.01.T01:CDS | 40.0% |
| ! | GCAACACCAACTTTCTAAGA+AGG | + | Chr3:93935579-93935598 | None:intergenic | 40.0% |
| !! | ATAAAGGCTTTGGAAGAAGC+TGG | - | Chr3:93934798-93934817 | MsG0380017240.01.T01:CDS | 40.0% |
| !! | TCTGAAACATCACCACCTTT+TGG | + | Chr3:93933929-93933948 | None:intergenic | 40.0% |
| !!! | AAAGGAAAAGCTTTTGGAGC+TGG | + | Chr3:93935724-93935743 | None:intergenic | 40.0% |
| AAGTCACAAAGGAACACCAG+TGG | - | Chr3:93933286-93933305 | MsG0380017240.01.T01:three_prime_UTR | 45.0% | |
| AATGTCCATATCCTCCACAG+TGG | + | Chr3:93934841-93934860 | None:intergenic | 45.0% | |
| AATTCTCAAGGCCCTTCTCA+TGG | - | Chr3:93935138-93935157 | MsG0380017240.01.T01:CDS | 45.0% | |
| AGAGGAAATCAGGAGACAAG+AGG | - | Chr3:93935948-93935967 | MsG0380017240.01.T01:CDS | 45.0% | |
| AGGAGTCTACTTTCAGCTCA+AGG | - | Chr3:93936060-93936079 | MsG0380017240.01.T01:CDS | 45.0% | |
| CAGCAGCTCTATGAGCTTTA+AGG | + | Chr3:93933457-93933476 | None:intergenic | 45.0% | |
| CATCTCTAATCACACGGTGT+CGG | + | Chr3:93934283-93934302 | None:intergenic | 45.0% | |
| CCGACATGGTGTTCTCAAAT+AGG | + | Chr3:93935762-93935781 | None:intergenic | 45.0% | |
| CCTCTTTCTCATTGCACATG+GGG | + | Chr3:93934000-93934019 | None:intergenic | 45.0% | |
| CTTAAAGCTCATAGAGCTGC+TGG | - | Chr3:93933455-93933474 | MsG0380017240.01.T01:CDS | 45.0% | |
| GACACCGTGTGATTAGAGAT+GGG | - | Chr3:93934282-93934301 | MsG0380017240.01.T01:intron | 45.0% | |
| GGAGTCTACTTTCAGCTCAA+GGG | - | Chr3:93936061-93936080 | MsG0380017240.01.T01:CDS | 45.0% | |
| GGGATCTGAACAAGAACCAT+AGG | + | Chr3:93933980-93933999 | None:intergenic | 45.0% | |
| GGTGCGAAAGAAAGTCACAA+AGG | - | Chr3:93933275-93933294 | MsG0380017240.01.T01:three_prime_UTR | 45.0% | |
| GTGCTCCACATCTTGAATTG+TGG | - | Chr3:93933708-93933727 | MsG0380017240.01.T01:CDS | 45.0% | |
| TAAGAAGTCCGGTCGTTCAT+CGG | - | Chr3:93935849-93935868 | MsG0380017240.01.T01:CDS | 45.0% | |
| TAGGACTTGTGCAAGCTAGA+TGG | - | Chr3:93934637-93934656 | MsG0380017240.01.T01:CDS | 45.0% | |
| TCAATGGTACTGCTGGAGTT+TGG | - | Chr3:93934772-93934791 | MsG0380017240.01.T01:CDS | 45.0% | |
| TCCCATGACAATGTTCGTAC+CGG | - | Chr3:93935633-93935652 | MsG0380017240.01.T01:CDS | 45.0% | |
| TCCGGTACGAACATTGTCAT+GGG | + | Chr3:93935637-93935656 | None:intergenic | 45.0% | |
| TGGGTAGTCACTAAGAAGTC+CGG | - | Chr3:93935838-93935857 | MsG0380017240.01.T01:CDS | 45.0% | |
| TTCGAGCTCATCTTCATGGA+TGG | - | Chr3:93934865-93934884 | MsG0380017240.01.T01:CDS | 45.0% | |
| TTCGCACCCCAATTGAACAA+AGG | + | Chr3:93933263-93933282 | None:intergenic | 45.0% | |
| ! | ACCTTGGCCTTTATGACATC+AGG | + | Chr3:93935107-93935126 | None:intergenic | 45.0% |
| ! | GAGAAACCAAAGCATCAACG+AGG | - | Chr3:93935895-93935914 | MsG0380017240.01.T01:CDS | 45.0% |
| ! | TTTGGGTTCAATGGTACTGC+TGG | - | Chr3:93934765-93934784 | MsG0380017240.01.T01:CDS | 45.0% |
| !! | ACGGTGTCGGTACAAAATGT+TGG | + | Chr3:93934270-93934289 | None:intergenic | 45.0% |
| !!! | ACATCACCACCTTTTGGAAC+AGG | + | Chr3:93933923-93933942 | None:intergenic | 45.0% |
| !! | ATAATTAATTAATATTTGAT+TGG | - | Chr3:93934571-93934590 | MsG0380017240.01.T01:intron | 5.0% |
| AACAACCCACGCAGGAATCT+CGG | + | Chr3:93935662-93935681 | None:intergenic | 50.0% | |
| ACGCACTTCCTAGCTGGAAT+AGG | + | Chr3:93935813-93935832 | None:intergenic | 50.0% | |
| ATCTCAGGCCTATTCCAGCT+AGG | - | Chr3:93935802-93935821 | MsG0380017240.01.T01:CDS | 50.0% | |
| ATTCGTACGCACTTCCTAGC+TGG | + | Chr3:93935819-93935838 | None:intergenic | 50.0% | |
| CAGCAGCATAGATGGCATTC+TGG | - | Chr3:93935053-93935072 | MsG0380017240.01.T01:intron | 50.0% | |
| CAGGTAACTCACATTGGCAC+TGG | + | Chr3:93935010-93935029 | None:intergenic | 50.0% | |
| CATGACAATGTTCGTACCGG+AGG | - | Chr3:93935636-93935655 | MsG0380017240.01.T01:CDS | 50.0% | |
| CCCCATGTGCAATGAGAAAG+AGG | - | Chr3:93933997-93934016 | MsG0380017240.01.T01:intron | 50.0% | |
| CCTGTAGCATCATCACCAAG+TGG | + | Chr3:93934605-93934624 | None:intergenic | 50.0% | |
| CGACACCGTGTGATTAGAGA+TGG | - | Chr3:93934281-93934300 | MsG0380017240.01.T01:intron | 50.0% | |
| CTCCGGTACGAACATTGTCA+TGG | + | Chr3:93935638-93935657 | None:intergenic | 50.0% | |
| GATGACCCTCGTTGATGCTT+TGG | + | Chr3:93935904-93935923 | None:intergenic | 50.0% | |
| GCAGTACCTCCACATCATTG+AGG | + | Chr3:93934902-93934921 | None:intergenic | 50.0% | |
| GCCTGATGTCATAAAGGCCA+AGG | - | Chr3:93935103-93935122 | MsG0380017240.01.T01:intron | 50.0% | |
| GCTGTTCGAGCTCATCTTCA+TGG | - | Chr3:93934861-93934880 | MsG0380017240.01.T01:CDS | 50.0% | |
| GGTGCCCACAATTCAAGATG+TGG | + | Chr3:93933716-93933735 | None:intergenic | 50.0% | |
| ! | AGCTAGGAAGTGCGTACGAA+TGG | - | Chr3:93935818-93935837 | MsG0380017240.01.T01:CDS | 50.0% |
| ! | CTTTGGAAGAAGCTGGTGGT+TGG | - | Chr3:93934805-93934824 | MsG0380017240.01.T01:CDS | 50.0% |
| ! | GCTAGGAAGTGCGTACGAAT+GGG | - | Chr3:93935819-93935838 | MsG0380017240.01.T01:CDS | 50.0% |
| !! | AAGGCTTTGGAAGAAGCTGG+TGG | - | Chr3:93934801-93934820 | MsG0380017240.01.T01:CDS | 50.0% |
| !! | CCACTTGGTGATGATGCTAC+AGG | - | Chr3:93934602-93934621 | MsG0380017240.01.T01:intron | 50.0% |
| !! | GAATTGTGGGCACCGACATT+TGG | - | Chr3:93933722-93933741 | MsG0380017240.01.T01:CDS | 50.0% |
| !! | GGCACCGACATTTGGTGTTA+GGG | - | Chr3:93933730-93933749 | MsG0380017240.01.T01:CDS | 50.0% |
| AAGTCCGGTCGTTCATCGGA+GGG | - | Chr3:93935853-93935872 | MsG0380017240.01.T01:CDS | 55.0% | |
| AGAACCGACGCGGATATCGA+CGG | - | Chr3:93933548-93933567 | MsG0380017240.01.T01:CDS | 55.0% | |
| AGGGTCATCAGCACCTGATC+TGG | - | Chr3:93935915-93935934 | MsG0380017240.01.T01:CDS | 55.0% | |
| ATCACCCTCCGATGAACGAC+CGG | + | Chr3:93935860-93935879 | None:intergenic | 55.0% | |
| GAGGACCACTGTGGAGGATA+TGG | - | Chr3:93934833-93934852 | MsG0380017240.01.T01:CDS | 55.0% | |
| GGAAGAAGCTGGTGGTTGGT+TGG | - | Chr3:93934809-93934828 | MsG0380017240.01.T01:CDS | 55.0% | |
| TTGGTTGGAGAGGACCACTG+TGG | - | Chr3:93934824-93934843 | MsG0380017240.01.T01:CDS | 55.0% | |
| ! | AAAGCAAGGGTGCACCACCA+AGG | - | Chr3:93936246-93936265 | MsG0380017240.01.T01:CDS | 55.0% |
| ! | AAGCTGGTGGTTGGTTGGAG+AGG | - | Chr3:93934814-93934833 | MsG0380017240.01.T01:CDS | 55.0% |
| ! | GATATCGACGGTGGTGTTGG+TGG | - | Chr3:93933560-93933579 | MsG0380017240.01.T01:CDS | 55.0% |
| !! | GGGCACCGACATTTGGTGTT+AGG | - | Chr3:93933729-93933748 | MsG0380017240.01.T01:CDS | 55.0% |
| ACCACCGTCGATATCCGCGT+CGG | + | Chr3:93933555-93933574 | None:intergenic | 60.0% | |
| AGAAGCGACGCGGCGTTTGA+CGG | + | Chr3:93933525-93933544 | None:intergenic | 60.0% | |
| CGCTTCTGGTAGAACCGACG+CGG | - | Chr3:93933538-93933557 | MsG0380017240.01.T01:CDS | 60.0% | |
| CGGTTCTACCAGAAGCGACG+CGG | + | Chr3:93933535-93933554 | None:intergenic | 60.0% | |
| GAAGTCCGGTCGTTCATCGG+AGG | - | Chr3:93935852-93935871 | MsG0380017240.01.T01:CDS | 60.0% | |
| GCGGATATCGACGGTGGTGT+TGG | - | Chr3:93933557-93933576 | MsG0380017240.01.T01:CDS | 60.0% | |
| GTTGGAGAGGACCACTGTGG+AGG | - | Chr3:93934827-93934846 | MsG0380017240.01.T01:CDS | 60.0% | |
| !! | ACGGTGGTGTTGGTGGTGGT+AGG | - | Chr3:93933567-93933586 | MsG0380017240.01.T01:CDS | 60.0% |
| !! | ATCGACGGTGGTGTTGGTGG+TGG | - | Chr3:93933563-93933582 | MsG0380017240.01.T01:CDS | 60.0% |
| !! | CGGTGGTGTTGGTGGTGGTA+GGG | - | Chr3:93933568-93933587 | MsG0380017240.01.T01:CDS | 60.0% |
| !! | TGATGACGGTGAGAGACGCG+TGG | + | Chr3:93933101-93933120 | None:intergenic | 60.0% |
| ACCGACGCGGATATCGACGG+TGG | - | Chr3:93933551-93933570 | MsG0380017240.01.T01:CDS | 65.0% | |
| CACGCAGGAATCTCGGCCTC+CGG | + | Chr3:93935655-93935674 | None:intergenic | 65.0% | |
| GGAGGCCGAGATTCCTGCGT+GGG | - | Chr3:93935654-93935673 | MsG0380017240.01.T01:CDS | 65.0% | |
| GTCAAACGCCGCGTCGCTTC+TGG | - | Chr3:93933524-93933543 | MsG0380017240.01.T01:CDS | 65.0% | |
| TGACGGTGAGAGACGCGTGG+AGG | + | Chr3:93933098-93933117 | None:intergenic | 65.0% | |
| AGCGACGCGGCGTTTGACGG+CGG | + | Chr3:93933522-93933541 | None:intergenic | 70.0% | |
| CGGAGGCCGAGATTCCTGCG+TGG | - | Chr3:93935653-93935672 | MsG0380017240.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 93932951 | 93936593 | 93932951 | ID=MsG0380017240.01;Name=MsG0380017240.01 |
| Chr3 | mRNA | 93932951 | 93936593 | 93932951 | ID=MsG0380017240.01.T01;Parent=MsG0380017240.01;Name=MsG0380017240.01.T01;_AED=0.17;_eAED=0.17;_QI=303|1|1|1|1|1|5|429|702 |
| Chr3 | exon | 93932951 | 93934009 | 93932951 | ID=MsG0380017240.01.T01:exon:1991;Parent=MsG0380017240.01.T01 |
| Chr3 | exon | 93934420 | 93934533 | 93934420 | ID=MsG0380017240.01.T01:exon:1990;Parent=MsG0380017240.01.T01 |
| Chr3 | exon | 93934630 | 93934920 | 93934630 | ID=MsG0380017240.01.T01:exon:1989;Parent=MsG0380017240.01.T01 |
| Chr3 | exon | 93935111 | 93935419 | 93935111 | ID=MsG0380017240.01.T01:exon:1988;Parent=MsG0380017240.01.T01 |
| Chr3 | exon | 93935526 | 93936593 | 93935526 | ID=MsG0380017240.01.T01:exon:1987;Parent=MsG0380017240.01.T01 |
| Chr3 | five_prime_UTR | 93936291 | 93936593 | 93936291 | ID=MsG0380017240.01.T01:five_prime_utr;Parent=MsG0380017240.01.T01 |
| Chr3 | CDS | 93935526 | 93936290 | 93935526 | ID=MsG0380017240.01.T01:cds;Parent=MsG0380017240.01.T01 |
| Chr3 | CDS | 93935111 | 93935419 | 93935111 | ID=MsG0380017240.01.T01:cds;Parent=MsG0380017240.01.T01 |
| Chr3 | CDS | 93934630 | 93934920 | 93934630 | ID=MsG0380017240.01.T01:cds;Parent=MsG0380017240.01.T01 |
| Chr3 | CDS | 93934420 | 93934533 | 93934420 | ID=MsG0380017240.01.T01:cds;Parent=MsG0380017240.01.T01 |
| Chr3 | CDS | 93933380 | 93934009 | 93933380 | ID=MsG0380017240.01.T01:cds;Parent=MsG0380017240.01.T01 |
| Chr3 | three_prime_UTR | 93932951 | 93933379 | 93932951 | ID=MsG0380017240.01.T01:three_prime_utr;Parent=MsG0380017240.01.T01 |
| Gene Sequence |
| Protein sequence |
