AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043125.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043125.01.T02 MTR_8g028700 93.939 528 26 1 1 528 1 522 0.0 1030
MsG0880043125.01.T02 MTR_8g032850 69.002 471 107 6 86 528 448 907 0.0 649
MsG0880043125.01.T02 MTR_8g032850 54.713 435 139 11 19 407 17 439 7.01e-134 410
MsG0880043125.01.T02 MTR_6g465150 53.416 322 146 3 200 521 113 430 5.14e-127 378
MsG0880043125.01.T02 MTR_1g021590 27.119 295 188 11 229 517 104 377 3.15e-18 87.8
MsG0880043125.01.T02 MTR_4g068457 25.566 309 198 12 220 517 113 400 8.41e-15 77.4
MsG0880043125.01.T02 MTR_5g087680 30.732 205 123 8 284 478 204 399 7.92e-14 74.3
MsG0880043125.01.T02 MTR_5g018520 24.138 232 143 6 317 517 136 365 1.06e-13 73.6
MsG0880043125.01.T02 MTR_1g072140 26.437 261 133 9 227 432 59 315 1.44e-12 68.9
MsG0880043125.01.T02 MTR_4g119620 25.455 220 145 7 228 433 111 325 2.07e-12 68.9
MsG0880043125.01.T02 MTR_2g436510 24.576 236 160 9 290 518 184 408 5.91e-12 68.2
MsG0880043125.01.T02 MTR_8g089650 26.906 223 127 9 236 429 211 426 7.95e-12 67.8
MsG0880043125.01.T02 MTR_4g106480 26.364 220 132 9 236 429 179 394 6.27e-11 64.7
MsG0880043125.01.T02 MTR_5g035980 25.714 245 131 9 235 429 198 441 8.88e-11 64.7
MsG0880043125.01.T01 MTR_8g028700 93.939 528 26 1 1 528 1 522 0.0 1030
MsG0880043125.01.T01 MTR_8g032850 69.002 471 107 6 86 528 448 907 0.0 649
MsG0880043125.01.T01 MTR_8g032850 54.713 435 139 11 19 407 17 439 7.01e-134 410
MsG0880043125.01.T01 MTR_6g465150 53.416 322 146 3 200 521 113 430 5.14e-127 378
MsG0880043125.01.T01 MTR_1g021590 27.119 295 188 11 229 517 104 377 3.15e-18 87.8
MsG0880043125.01.T01 MTR_4g068457 25.566 309 198 12 220 517 113 400 8.41e-15 77.4
MsG0880043125.01.T01 MTR_5g087680 30.732 205 123 8 284 478 204 399 7.92e-14 74.3
MsG0880043125.01.T01 MTR_5g018520 24.138 232 143 6 317 517 136 365 1.06e-13 73.6
MsG0880043125.01.T01 MTR_1g072140 26.437 261 133 9 227 432 59 315 1.44e-12 68.9
MsG0880043125.01.T01 MTR_4g119620 25.455 220 145 7 228 433 111 325 2.07e-12 68.9
MsG0880043125.01.T01 MTR_2g436510 24.576 236 160 9 290 518 184 408 5.91e-12 68.2
MsG0880043125.01.T01 MTR_8g089650 26.906 223 127 9 236 429 211 426 7.95e-12 67.8
MsG0880043125.01.T01 MTR_4g106480 26.364 220 132 9 236 429 179 394 6.27e-11 64.7
MsG0880043125.01.T01 MTR_5g035980 25.714 245 131 9 235 429 198 441 8.88e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043125.01.T02 AT5G51980 47.989 373 175 5 156 521 71 431 2.03e-120 361
MsG0880043125.01.T02 AT5G51980 47.989 373 175 5 156 521 71 431 2.03e-120 361
MsG0880043125.01.T02 AT4G25440 51.829 328 154 3 200 527 107 430 5.95e-120 360
MsG0880043125.01.T02 AT4G25440 51.829 328 154 3 200 527 107 430 5.95e-120 360
MsG0880043125.01.T02 AT4G25440 51.829 328 154 3 200 527 107 430 5.95e-120 360
MsG0880043125.01.T02 AT5G49200 50.467 321 152 5 200 516 94 411 2.68e-106 324
MsG0880043125.01.T02 AT5G40880 48.182 330 167 3 196 524 117 443 2.67e-103 318
MsG0880043125.01.T02 AT5G40880 48.182 330 167 3 196 524 146 472 5.64e-103 318
MsG0880043125.01.T02 AT3G50390 23.358 274 168 9 281 517 101 369 1.17e-17 86.3
MsG0880043125.01.T02 AT1G49450 25.862 290 171 11 265 517 121 403 1.27e-17 85.9
MsG0880043125.01.T02 AT3G18950 23.958 288 179 9 265 517 125 407 1.86e-16 82.4
MsG0880043125.01.T02 AT1G47610 25.161 310 190 11 223 517 10 292 2.64e-15 77.8
MsG0880043125.01.T02 AT2G26490 29.954 217 124 9 236 429 205 416 3.06e-13 72.4
MsG0880043125.01.T02 AT2G26490 23.077 338 226 12 190 517 51 364 6.96e-13 71.2
MsG0880043125.01.T02 AT4G15900 26.271 236 156 8 290 518 190 414 4.84e-13 72.0
MsG0880043125.01.T02 AT3G49660 25.688 218 145 6 228 433 104 316 1.01e-12 69.7
MsG0880043125.01.T02 AT3G16650 26.383 235 156 9 290 518 184 407 2.51e-12 69.7
MsG0880043125.01.T02 AT4G02730 27.642 246 155 10 204 432 93 332 7.80e-12 67.0
MsG0880043125.01.T02 AT1G24130 25.571 219 137 7 236 429 191 408 1.56e-11 66.6
MsG0880043125.01.T02 AT2G22040 23.830 235 145 8 230 442 77 299 1.67e-11 65.9
MsG0880043125.01.T01 AT5G51980 47.989 373 175 5 156 521 71 431 2.03e-120 361
MsG0880043125.01.T01 AT5G51980 47.989 373 175 5 156 521 71 431 2.03e-120 361
MsG0880043125.01.T01 AT4G25440 51.829 328 154 3 200 527 107 430 5.95e-120 360
MsG0880043125.01.T01 AT4G25440 51.829 328 154 3 200 527 107 430 5.95e-120 360
MsG0880043125.01.T01 AT4G25440 51.829 328 154 3 200 527 107 430 5.95e-120 360
MsG0880043125.01.T01 AT5G49200 50.467 321 152 5 200 516 94 411 2.68e-106 324
MsG0880043125.01.T01 AT5G40880 48.182 330 167 3 196 524 117 443 2.67e-103 318
MsG0880043125.01.T01 AT5G40880 48.182 330 167 3 196 524 146 472 5.64e-103 318
MsG0880043125.01.T01 AT3G50390 23.358 274 168 9 281 517 101 369 1.17e-17 86.3
MsG0880043125.01.T01 AT1G49450 25.862 290 171 11 265 517 121 403 1.27e-17 85.9
MsG0880043125.01.T01 AT3G18950 23.958 288 179 9 265 517 125 407 1.86e-16 82.4
MsG0880043125.01.T01 AT1G47610 25.161 310 190 11 223 517 10 292 2.64e-15 77.8
MsG0880043125.01.T01 AT2G26490 29.954 217 124 9 236 429 205 416 3.06e-13 72.4
MsG0880043125.01.T01 AT2G26490 23.077 338 226 12 190 517 51 364 6.96e-13 71.2
MsG0880043125.01.T01 AT4G15900 26.271 236 156 8 290 518 190 414 4.84e-13 72.0
MsG0880043125.01.T01 AT3G49660 25.688 218 145 6 228 433 104 316 1.01e-12 69.7
MsG0880043125.01.T01 AT3G16650 26.383 235 156 9 290 518 184 407 2.51e-12 69.7
MsG0880043125.01.T01 AT4G02730 27.642 246 155 10 204 432 93 332 7.80e-12 67.0
MsG0880043125.01.T01 AT1G24130 25.571 219 137 7 236 429 191 408 1.56e-11 66.6
MsG0880043125.01.T01 AT2G22040 23.830 235 145 8 230 442 77 299 1.67e-11 65.9

Find 106 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCGTTACTTCAAATTT+AGG 0.111680 8:-19353210 MsG0880043125.01.T01:intron
TTCATTGTAAACTTTATAAT+TGG 0.150779 8:-19353068 MsG0880043125.01.T01:intron
GAGGATACAGTGGCTGATTT+AGG 0.170115 8:-19352991 MsG0880043125.01.T01:intron
ACTTATTAGGGTGATGATTT+GGG 0.189118 8:-19353159 MsG0880043125.01.T01:intron
TGAATCATCCAATTCTGATA+TGG 0.210558 8:-19352767 MsG0880043125.01.T01:intron
ACCCTAAAATTGATCGAAAT+TGG 0.212704 8:+19353295 None:intergenic
TACTTATTAGGGTGATGATT+TGG 0.226749 8:-19353160 MsG0880043125.01.T01:intron
TGAATCGTCCAATTCTGATA+TGG 0.239835 8:-19352813 MsG0880043125.01.T01:intron
GAATAGGGCATTATAAAGTT+TGG 0.255409 8:-19352682 MsG0880043125.01.T01:intron
GCTTCGTTACTTCAAATTTA+GGG 0.267834 8:-19353209 MsG0880043125.01.T01:intron
GATACAGTGAATTGGGGTTT+TGG 0.280610 8:-19352859 MsG0880043125.01.T01:intron
CACCGAGTATCTGCAAATAC+TGG 0.296151 8:-19351930 MsG0880043125.01.T01:CDS
GTTTACGATTCGCGACATTA+TGG 0.303616 8:-19352968 MsG0880043125.01.T01:intron
GACAGTCTTCGTATTATGTT+TGG 0.305087 8:+19352098 None:intergenic
ATTTAGAGATACAGTGAATT+GGG 0.309672 8:-19352866 MsG0880043125.01.T01:intron
AGGATACAGTGGCTGATTTA+GGG 0.314921 8:-19352990 MsG0880043125.01.T01:intron
TCGGGAAAACATGTGTTTAT+TGG 0.317668 8:-19352476 MsG0880043125.01.T01:CDS
TGGCTGATCTTGGATGTTAT+TGG 0.338473 8:-19352578 MsG0880043125.01.T01:intron
CTGCTGCAATTTGTGTTCCT+TGG 0.340425 8:-19352940 MsG0880043125.01.T01:intron
GAATGTCTTCGCATTAGGTT+TGG 0.348216 8:+19352179 None:intergenic
TGAAGTAACGAAGCAAATAA+AGG 0.349219 8:+19353218 None:intergenic
GACCGGTTCAGTATTATGTT+TGG 0.360342 8:+19352017 None:intergenic
TCATTACAAACTTTAGAATA+GGG 0.362263 8:-19352697 MsG0880043125.01.T01:intron
TTCAAGAATGTCTTCGCATT+AGG 0.362739 8:+19352174 None:intergenic
GAATCATCCAATTCTGATAT+GGG 0.364051 8:-19352766 MsG0880043125.01.T01:intron
TGAATAACCCATATCAGAAT+TGG 0.372057 8:+19352805 None:intergenic
AATTTAGAGATACAGTGAAT+TGG 0.372154 8:-19352867 MsG0880043125.01.T01:intron
ACCGGTTCAGTATTATGTTT+GGG 0.381120 8:+19352018 None:intergenic
TTCATTACAAACTTTAGAAT+AGG 0.381364 8:-19352698 MsG0880043125.01.T01:intron
TCCCTCAAGCTTTGCTATTG+AGG 0.382939 8:+19351837 None:intergenic
CCTTCGTGTTATGTTTGGTA+AGG 0.395085 8:+19352232 None:intergenic
TGCAGCCTTCGTGTTATGTT+TGG 0.404114 8:+19352227 None:intergenic
GAATCGTCCAATTCTGATAT+GGG 0.410260 8:-19352812 MsG0880043125.01.T01:intron
TCATTGTAAACTTTATAATT+GGG 0.410791 8:-19353067 MsG0880043125.01.T01:intron
CCGGTCTTGAATAGAAAGAT+TGG 0.418536 8:-19352000 MsG0880043125.01.T01:CDS
AACAACTCTCATCGTTCCTT+CGG 0.418701 8:-19353347 MsG0880043125.01.T01:five_prime_UTR
AAAACCACGAATGTAAATTC+TGG 0.421752 8:+19351875 None:intergenic
ACATTCTTGAATAGAAAGAT+TGG 0.432213 8:-19352162 MsG0880043125.01.T01:CDS
CTTCGTATTATGTTTGGAAA+AGG 0.435286 8:+19352104 None:intergenic
TTCTCATCTTTATCGCTCTC+AGG 0.436846 8:-19353323 MsG0880043125.01.T01:intron
GTGAATGACAGTTGTGTTCA+TGG 0.441949 8:-19351907 MsG0880043125.01.T01:CDS
AATGTCTTCGCATTAGGTTT+GGG 0.444707 8:+19352180 None:intergenic
TCTTCATGCAGAGCTGGTAC+TGG 0.449089 8:-19352306 MsG0880043125.01.T01:CDS
AGATAACGATGGTAAATTAT+CGG 0.449713 8:-19353128 MsG0880043125.01.T01:intron
AGTGCCAGAATTTACATTCG+TGG 0.450873 8:-19351879 MsG0880043125.01.T01:CDS
GTATTTCCTCCAATTCTGTA+TGG 0.451535 8:-19353106 MsG0880043125.01.T01:intron
CTTCGTGTTATGTTTGGTAA+GGG 0.452866 8:+19352233 None:intergenic
GCATTACAAGAAGCAGTTGC+CGG 0.459171 8:+19352402 None:intergenic
ACATGTGTTTATTGGCTCGC+TGG 0.462559 8:-19352468 MsG0880043125.01.T01:CDS
AATGCAACAGAAATCCTTGT+AGG 0.464299 8:-19352443 MsG0880043125.01.T01:CDS
TCGGCAACAATACGTGTTCC+CGG 0.468909 8:-19353245 MsG0880043125.01.T01:intron
GAAGGAACGATGAGAGTTGT+TGG 0.476070 8:+19353349 None:intergenic
TCCCAAACATAATACTGAAC+CGG 0.478214 8:-19352019 MsG0880043125.01.T01:CDS
TTCGCATTAGGTTTGGGAAG+GGG 0.484751 8:+19352186 None:intergenic
ATCATAATGCTGCATGGAAG+CGG 0.488251 8:-19352365 MsG0880043125.01.T01:CDS
CCAATCTTTCTATTCAAGAC+CGG 0.489613 8:+19352000 None:intergenic
CATGTGTTTATTGGCTCGCT+GGG 0.491753 8:-19352467 MsG0880043125.01.T01:CDS
TCTTGTAATGCTGCCAACGC+TGG 0.492864 8:-19352390 MsG0880043125.01.T01:CDS
TAGGATAAAGTGGCTGATCT+TGG 0.492939 8:-19352588 MsG0880043125.01.T01:intron
TCCTCAATAGCAAAGCTTGA+GGG 0.497866 8:-19351838 MsG0880043125.01.T01:CDS
ACTGTCTTGAATAGAAAGAC+TGG 0.503936 8:-19352081 MsG0880043125.01.T01:CDS
ATCAATCATGGATGTGAAAG+TGG 0.508504 8:-19352526 MsG0880043125.01.T01:exon
CGAAGCAAATAAAGGTTCGC+CGG 0.515626 8:+19353226 None:intergenic
CTTATTAGGGTGATGATTTG+GGG 0.516447 8:-19353158 MsG0880043125.01.T01:intron
GGTATTCGATTGTTGTTGGT+AGG 0.522153 8:-19352607 MsG0880043125.01.T01:intron
CTTCGCATTAGGTTTGGGAA+GGG 0.524625 8:+19352185 None:intergenic
TGCCGATGATCCATGGTAAG+AGG 0.525012 8:+19353262 None:intergenic
TACGATTCAACCTCTTACCA+TGG 0.526022 8:-19353272 MsG0880043125.01.T01:intron
GTTCAGTATTATGTTTGGGA+AGG 0.528869 8:+19352022 None:intergenic
ACCCAGTATTTGCAGATACT+CGG 0.530599 8:+19351928 None:intergenic
ATGCAATTTCACCGTGCGAT+GGG 0.532017 8:+19352337 None:intergenic
GAAGCAAATAAAGGTTCGCC+GGG 0.535325 8:+19353227 None:intergenic
GTAGAACTGAACAAGTCATC+GGG 0.535669 8:-19352494 MsG0880043125.01.T01:CDS
GTTTCTTCATAGTGCAGCGC+CGG 0.544515 8:-19352421 MsG0880043125.01.T01:CDS
TATCCGTCTTCATGCAGAGC+TGG 0.546080 8:-19352312 MsG0880043125.01.T01:CDS
TTCAGTATTATGTTTGGGAA+GGG 0.547534 8:+19352023 None:intergenic
TCTCATACACATACGATGAA+TGG 0.547953 8:+19352259 None:intergenic
AAGATTGGAGATGACAGAGA+TGG 0.549609 8:-19351985 MsG0880043125.01.T01:CDS
TCTTCGCATTAGGTTTGGGA+AGG 0.551950 8:+19352184 None:intergenic
TTTAGAGATACAGTGAATTG+GGG 0.555605 8:-19352865 MsG0880043125.01.T01:intron
TTCGTGTTATGTTTGGTAAG+GGG 0.560021 8:+19352234 None:intergenic
ACCGAGTATCTGCAAATACT+GGG 0.565524 8:-19351929 MsG0880043125.01.T01:CDS
TTCCTCAATAGCAAAGCTTG+AGG 0.567998 8:-19351839 MsG0880043125.01.T01:CDS
GTATTGTTGCCGATGATCCA+TGG 0.569294 8:+19353255 None:intergenic
AACCTCTTACCATGGATCAT+CGG 0.571690 8:-19353264 MsG0880043125.01.T01:intron
AGTAGAACTGAACAAGTCAT+CGG 0.577794 8:-19352495 MsG0880043125.01.T01:CDS
AGATTGGAGATGACAGAGAT+GGG 0.578565 8:-19351984 MsG0880043125.01.T01:CDS
AAAGCTTGAGGGACACAAGA+AGG 0.580476 8:-19351827 MsG0880043125.01.T01:intron
GATGCAATTTCACCGTGCGA+TGG 0.594792 8:+19352336 None:intergenic
CTGGATATCATAATGCTGCA+TGG 0.597380 8:-19352371 MsG0880043125.01.T01:CDS
AGGCACAGCTCAAGTTGTTG+AGG 0.598388 8:-19352130 MsG0880043125.01.T01:CDS
TTGTTGTTGGTAGGATAAAG+TGG 0.600854 8:-19352598 MsG0880043125.01.T01:intron
GTACCAGCTCTGCATGAAGA+CGG 0.612256 8:+19352309 None:intergenic
TTATTAGGGTGATGATTTGG+GGG 0.623180 8:-19353157 MsG0880043125.01.T01:intron
CGATAAAGATGAGAATCCGA+AGG 0.623639 8:+19353331 None:intergenic
AGAAAGATTGGAGATAACAA+AGG 0.628689 8:-19352150 MsG0880043125.01.T01:CDS
AGCATTATGATATCCAGCGT+TGG 0.629499 8:+19352377 None:intergenic
TCATGGATGTGAAAGTGGCA+AGG 0.637601 8:-19352521 MsG0880043125.01.T01:CDS
GCACTATGAAGAAACCTACA+AGG 0.638653 8:+19352429 None:intergenic
AGCAAGCACAGAAGTTGCTG+AGG 0.642199 8:-19352049 MsG0880043125.01.T01:CDS
TATTTGCAGATACTCGGTGA+AGG 0.649197 8:+19351934 None:intergenic
GAGGATACAGTGTTTGCATG+AGG 0.656554 8:-19353010 MsG0880043125.01.T01:intron
AAGCGGCATTACCCATCGCA+CGG 0.673524 8:-19352348 MsG0880043125.01.T01:CDS
GAAACCCTAAAATTGAACCA+AGG 0.687005 8:+19352923 None:intergenic
GTGTTTGCATGAGGATACAG+TGG 0.735052 8:-19353001 MsG0880043125.01.T01:intron
CCTTACCAAACATAACACGA+AGG 0.752214 8:-19352232 MsG0880043125.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATTTATTTTACTTATTA+GGG - Chr8:19350450-19350469 MsG0880043125.01.T01:CDS 10.0%
!!! TTCTTTTATTTTACTTATTA+GGG - Chr8:19350182-19350201 MsG0880043125.01.T01:intron 10.0%
!!! TTTCATTTATTTTACTTATT+AGG - Chr8:19350449-19350468 MsG0880043125.01.T01:CDS 10.0%
!!! TTTCTTTTATTTTACTTATT+AGG - Chr8:19350181-19350200 MsG0880043125.01.T01:intron 10.0%
!! TCATTGTAAACTTTATAATT+GGG - Chr8:19350286-19350305 MsG0880043125.01.T01:CDS 15.0%
!! TTCATTGTAAACTTTATAAT+TGG - Chr8:19350285-19350304 MsG0880043125.01.T01:CDS 15.0%
!!! CAAATTTTTATTTAAATCAC+AGG - Chr8:19352207-19352226 MsG0880043125.01.T01:CDS 15.0%
!!! TTTTTATTCTGATTATTACA+GGG - Chr8:19352821-19352840 MsG0880043125.01.T01:intron 15.0%
!!! TTTTTTATTCTGATTATTAC+AGG - Chr8:19352820-19352839 MsG0880043125.01.T01:intron 15.0%
!! AAAATATACTATACAACTAG+TGG + Chr8:19352138-19352157 None:intergenic 20.0%
!! AAACAATAGAAATACCTTAA+TGG + Chr8:19352377-19352396 None:intergenic 20.0%
!! AAACATTTCTCAAAAACATA+AGG + Chr8:19351583-19351602 None:intergenic 20.0%
!! AAAGAGCAGTTTATATTAAA+TGG - Chr8:19353345-19353364 MsG0880043125.01.T01:five_prime_UTR 20.0%
!! ATATTATGTTGAACATCATT+TGG - Chr8:19352752-19352771 MsG0880043125.01.T01:intron 20.0%
!! ATTTCTATTGTTTGGAAATA+CGG - Chr8:19352384-19352403 MsG0880043125.01.T01:CDS 20.0%
!! TTTGTTTGTAGTGATTAAAT+TGG - Chr8:19352781-19352800 MsG0880043125.01.T01:intron 20.0%
!!! AATATTATAGGCTTATTTTC+TGG + Chr8:19352875-19352894 None:intergenic 20.0%
!!! AATTTAGGGTTTCAATTTTA+TGG - Chr8:19350158-19350177 MsG0880043125.01.T01:three_prime_UTR 20.0%
!!! ATTAAGGTATTTCTATTGTT+TGG - Chr8:19352376-19352395 MsG0880043125.01.T01:CDS 20.0%
!!! TATCTTTTATTGTTTTATCC+AGG - Chr8:19352498-19352517 MsG0880043125.01.T01:CDS 20.0%
!!! TCATTACAAACTTTAGAATA+GGG - Chr8:19350656-19350675 MsG0880043125.01.T01:intron 20.0%
!!! TTCATTACAAACTTTAGAAT+AGG - Chr8:19350655-19350674 MsG0880043125.01.T01:intron 20.0%
!!! TTTTAGAGTATAATCAATCA+TGG - Chr8:19350815-19350834 MsG0880043125.01.T01:CDS 20.0%
!!! TTTTTATTTAAATCACAGGA+TGG - Chr8:19352211-19352230 MsG0880043125.01.T01:CDS 20.0%
! AACAAAAAACCATACAGAAT+TGG + Chr8:19350259-19350278 None:intergenic 25.0%
! AATAATGATGAACAAATAGC+AGG + Chr8:19353323-19353342 None:intergenic 25.0%
! AATTTAGAGATACAGTGAAT+TGG - Chr8:19350486-19350505 MsG0880043125.01.T01:CDS 25.0%
! ACATTCTTGAATAGAAAGAT+TGG - Chr8:19351191-19351210 MsG0880043125.01.T01:intron 25.0%
! AGATAACGATGGTAAATTAT+CGG - Chr8:19350225-19350244 MsG0880043125.01.T01:CDS 25.0%
! ATTTAGAGATACAGTGAATT+GGG - Chr8:19350487-19350506 MsG0880043125.01.T01:CDS 25.0%
! CAAAATCAGCTTTCATATTA+TGG + Chr8:19351922-19351941 None:intergenic 25.0%
! TATATATAGCATTTGTGCAT+AGG - Chr8:19352717-19352736 MsG0880043125.01.T01:intron 25.0%
! TCTAATCTATGAATCATCTT+TGG - Chr8:19352409-19352428 MsG0880043125.01.T01:CDS 25.0%
! TTTGTAGTGATTAAATTGGT+AGG - Chr8:19352785-19352804 MsG0880043125.01.T01:intron 25.0%
!! AAAAATAAATTGATTCCTGG+TGG + Chr8:19353221-19353240 None:intergenic 25.0%
!! AAGTATTGTTGAATGATCAA+TGG + Chr8:19353245-19353264 None:intergenic 25.0%
!! GGAAAAAATAAATTGATTCC+TGG + Chr8:19353224-19353243 None:intergenic 25.0%
!! TCCAATTTCGATCAATTTTA+GGG - Chr8:19350057-19350076 MsG0880043125.01.T01:three_prime_UTR 25.0%
!! TTCCAATTTCGATCAATTTT+AGG - Chr8:19350056-19350075 MsG0880043125.01.T01:three_prime_UTR 25.0%
!! TTTGAGAAATGTTTGAAACT+AGG - Chr8:19351589-19351608 MsG0880043125.01.T01:CDS 25.0%
!! TTTTACTTATTAGGGTTTTC+AGG - Chr8:19350458-19350477 MsG0880043125.01.T01:CDS 25.0%
!!! AATTTACATTCGTGGTTTTA+TGG - Chr8:19351482-19351501 MsG0880043125.01.T01:intron 25.0%
!!! TTATTGTTTTATCCAGGTTT+GGG - Chr8:19352504-19352523 MsG0880043125.01.T01:CDS 25.0%
!!! TTTATTGTTTTATCCAGGTT+TGG - Chr8:19352503-19352522 MsG0880043125.01.T01:CDS 25.0%
AAAAAACCATACAGAATTGG+AGG + Chr8:19350256-19350275 None:intergenic 30.0%
AAAACCACGAATGTAAATTC+TGG + Chr8:19351481-19351500 None:intergenic 30.0%
AACAATCGAATACCAAAAAC+AGG + Chr8:19350740-19350759 None:intergenic 30.0%
AATCTATGAATCATCTTTGG+TGG - Chr8:19352412-19352431 MsG0880043125.01.T01:CDS 30.0%
ACCCTAAAATTGATCGAAAT+TGG + Chr8:19350061-19350080 None:intergenic 30.0%
ACTTATTAGGGTGATGATTT+GGG - Chr8:19350194-19350213 MsG0880043125.01.T01:CDS 30.0%
AGAAAGATTGGAGATAACAA+AGG - Chr8:19351203-19351222 MsG0880043125.01.T01:intron 30.0%
CATTTCTCAAAAACATAAGG+TGG + Chr8:19351580-19351599 None:intergenic 30.0%
CTTCGTATTATGTTTGGAAA+AGG + Chr8:19351252-19351271 None:intergenic 30.0%
CTTGAAATGTAATCTTGAAC+TGG - Chr8:19352982-19353001 MsG0880043125.01.T01:intron 30.0%
GAATCATCCAATTCTGATAT+GGG - Chr8:19350587-19350606 MsG0880043125.01.T01:intron 30.0%
GCTTCGTTACTTCAAATTTA+GGG - Chr8:19350144-19350163 MsG0880043125.01.T01:three_prime_UTR 30.0%
TACTTATTAGGGTGATGATT+TGG - Chr8:19350193-19350212 MsG0880043125.01.T01:CDS 30.0%
TCATACCAACAAAAATCCAT+GGG + Chr8:19351819-19351838 None:intergenic 30.0%
TGAAGTAACGAAGCAAATAA+AGG + Chr8:19350138-19350157 None:intergenic 30.0%
TGAATAACCCATATCAGAAT+TGG + Chr8:19350551-19350570 None:intergenic 30.0%
TGAATCATCCAATTCTGATA+TGG - Chr8:19350586-19350605 MsG0880043125.01.T01:intron 30.0%
TGCTTCGTTACTTCAAATTT+AGG - Chr8:19350143-19350162 MsG0880043125.01.T01:three_prime_UTR 30.0%
TTCAGTATTATGTTTGGGAA+GGG + Chr8:19351333-19351352 None:intergenic 30.0%
TTCATACCAACAAAAATCCA+TGG + Chr8:19351820-19351839 None:intergenic 30.0%
TTTAGAGATACAGTGAATTG+GGG - Chr8:19350488-19350507 MsG0880043125.01.T01:CDS 30.0%
! ATGGATTTTTGTTGGTATGA+AGG - Chr8:19351819-19351838 MsG0880043125.01.T01:intron 30.0%
! ATTTTTGAACAGCTTATCAC+TGG - Chr8:19351655-19351674 MsG0880043125.01.T01:CDS 30.0%
! GAATAGGGCATTATAAAGTT+TGG - Chr8:19350671-19350690 MsG0880043125.01.T01:intron 30.0%
! GTAATGAACAATTTTGCATG+AGG - Chr8:19350693-19350712 MsG0880043125.01.T01:CDS 30.0%
! TATTCAACATCTTTTGCATG+AGG - Chr8:19350324-19350343 MsG0880043125.01.T01:intron 30.0%
! TGTTCCTTGGTTCAATTTTA+GGG - Chr8:19350426-19350445 MsG0880043125.01.T01:intron 30.0%
! TTTTGGTATTCGATTGTTGT+TGG - Chr8:19350742-19350761 MsG0880043125.01.T01:CDS 30.0%
AACAACCATAAAGCAATGTG+TGG + Chr8:19352081-19352100 None:intergenic 35.0%
AACCAGTTTAAAAGGGGAAT+TGG + Chr8:19352269-19352288 None:intergenic 35.0%
AATGCAACAGAAATCCTTGT+AGG - Chr8:19350910-19350929 MsG0880043125.01.T01:intron 35.0%
AATGTCTTCGCATTAGGTTT+GGG + Chr8:19351176-19351195 None:intergenic 35.0%
AATTACCTCTTTGATCAGTG+AGG - Chr8:19351792-19351811 MsG0880043125.01.T01:intron 35.0%
ACAACCATAAAGCAATGTGT+GGG + Chr8:19352080-19352099 None:intergenic 35.0%
ACTGTCTTGAATAGAAAGAC+TGG - Chr8:19351272-19351291 MsG0880043125.01.T01:intron 35.0%
AGAACTTGTCCCAACAAATA+AGG + Chr8:19352588-19352607 None:intergenic 35.0%
AGTAGAACTGAACAAGTCAT+CGG - Chr8:19350858-19350877 MsG0880043125.01.T01:intron 35.0%
AGTGATGCAACCAGTTTAAA+AGG + Chr8:19352277-19352296 None:intergenic 35.0%
ATACCTTAATGGTTTGATCC+CGG + Chr8:19352366-19352385 None:intergenic 35.0%
ATCAATCATGGATGTGAAAG+TGG - Chr8:19350827-19350846 MsG0880043125.01.T01:CDS 35.0%
ATCTATACAGATTTGCAGAG+AGG - Chr8:19353030-19353049 MsG0880043125.01.T01:intron 35.0%
ATTACCTCTTTGATCAGTGA+GGG - Chr8:19351793-19351812 MsG0880043125.01.T01:intron 35.0%
CCAATCTTTCTATTCAAGAC+CGG + Chr8:19351356-19351375 None:intergenic 35.0%
CTTATTAGGGTGATGATTTG+GGG - Chr8:19350195-19350214 MsG0880043125.01.T01:CDS 35.0%
CTTCGTGTTATGTTTGGTAA+GGG + Chr8:19351123-19351142 None:intergenic 35.0%
GAAACCCTAAAATTGAACCA+AGG + Chr8:19350433-19350452 None:intergenic 35.0%
GAAATGGTTGGAAGAATACA+AGG - Chr8:19353148-19353167 MsG0880043125.01.T01:intron 35.0%
GAACTTGTCCCAACAAATAA+GGG + Chr8:19352587-19352606 None:intergenic 35.0%
GAATCGTCCAATTCTGATAT+GGG - Chr8:19350541-19350560 MsG0880043125.01.T01:intron 35.0%
GACAGTCTTCGTATTATGTT+TGG + Chr8:19351258-19351277 None:intergenic 35.0%
GCAAAAACCCATATCAGAAT+TGG + Chr8:19350597-19350616 None:intergenic 35.0%
GGATCAGACAAACTTTATTC+TGG - Chr8:19351694-19351713 MsG0880043125.01.T01:intron 35.0%
GGTAGCAAATTTACTTACGA+TGG + Chr8:19352938-19352957 None:intergenic 35.0%
GTAGTGATTAAATTGGTAGG+AGG - Chr8:19352788-19352807 MsG0880043125.01.T01:intron 35.0%
GTATTTCCTCCAATTCTGTA+TGG - Chr8:19350247-19350266 MsG0880043125.01.T01:CDS 35.0%
GTGATGCAACCAGTTTAAAA+GGG + Chr8:19352276-19352295 None:intergenic 35.0%
GTTCAGTATTATGTTTGGGA+AGG + Chr8:19351334-19351353 None:intergenic 35.0%
TAAAGTTTGTCTGATCCATC+CGG + Chr8:19351691-19351710 None:intergenic 35.0%
TATCACTGGAATGACAATTC+CGG - Chr8:19351669-19351688 MsG0880043125.01.T01:CDS 35.0%
TCCCAAACATAATACTGAAC+CGG - Chr8:19351334-19351353 MsG0880043125.01.T01:CDS 35.0%
TCGGGAAAACATGTGTTTAT+TGG - Chr8:19350877-19350896 MsG0880043125.01.T01:intron 35.0%
TCTATACAGATTTGCAGAGA+GGG - Chr8:19353031-19353050 MsG0880043125.01.T01:intron 35.0%
TCTCATACACATACGATGAA+TGG + Chr8:19351097-19351116 None:intergenic 35.0%
TGAATCGTCCAATTCTGATA+TGG - Chr8:19350540-19350559 MsG0880043125.01.T01:intron 35.0%
TGATGCAACCAGTTTAAAAG+GGG + Chr8:19352275-19352294 None:intergenic 35.0%
TGTCATTGTGGTATTTGTGA+AGG - Chr8:19351940-19351959 MsG0880043125.01.T01:CDS 35.0%
TTAGGTCCATCAAGAGTAAA+AGG + Chr8:19351989-19352008 None:intergenic 35.0%
TTCAAGAATGTCTTCGCATT+AGG + Chr8:19351182-19351201 None:intergenic 35.0%
TTCGTGTTATGTTTGGTAAG+GGG + Chr8:19351122-19351141 None:intergenic 35.0%
TTGTACACTCAAATGTGTCA+AGG + Chr8:19352531-19352550 None:intergenic 35.0%
TTGTTTGCAAAGCAAGAAGT+TGG - Chr8:19353059-19353078 MsG0880043125.01.T01:intron 35.0%
! ACATAACAACCTGATGATGA+TGG + Chr8:19352959-19352978 None:intergenic 35.0%
! ACCGGTTCAGTATTATGTTT+GGG + Chr8:19351338-19351357 None:intergenic 35.0%
! ATACAGTGAATTGGGGTTTT+GGG - Chr8:19350495-19350514 MsG0880043125.01.T01:CDS 35.0%
! ATGTGTTGATGTAACGAATC+TGG - Chr8:19351762-19351781 MsG0880043125.01.T01:intron 35.0%
! GTGTTCCTTGGTTCAATTTT+AGG - Chr8:19350425-19350444 MsG0880043125.01.T01:intron 35.0%
! TAAGAGTGTATGAGTATCCT+TGG + Chr8:19352038-19352057 None:intergenic 35.0%
! TCTGATATGGGTTTTTGCTA+TGG - Chr8:19350599-19350618 MsG0880043125.01.T01:intron 35.0%
! TCTGGTTTCAAAACAAAGCA+GGG - Chr8:19352641-19352660 MsG0880043125.01.T01:intron 35.0%
! TGTGTTGATGTAACGAATCT+GGG - Chr8:19351763-19351782 MsG0880043125.01.T01:intron 35.0%
! TGTTCTACTCTTCCTGTTTT+TGG - Chr8:19350725-19350744 MsG0880043125.01.T01:CDS 35.0%
! TTATTAGGGTGATGATTTGG+GGG - Chr8:19350196-19350215 MsG0880043125.01.T01:CDS 35.0%
! TTGTTGTTGGTAGGATAAAG+TGG - Chr8:19350755-19350774 MsG0880043125.01.T01:CDS 35.0%
! TTTAAAAGGGGAATTGGCTT+CGG + Chr8:19352263-19352282 None:intergenic 35.0%
! TTTACTCTTGATGGACCTAA+GGG - Chr8:19351989-19352008 MsG0880043125.01.T01:CDS 35.0%
!! AATTTGCTACCATCATCATC+AGG - Chr8:19352947-19352966 MsG0880043125.01.T01:intron 35.0%
!! GAAAGCTGATTTTGTCATTG+TGG - Chr8:19351928-19351947 MsG0880043125.01.T01:CDS 35.0%
!! TTTTACTCTTGATGGACCTA+AGG - Chr8:19351988-19352007 MsG0880043125.01.T01:CDS 35.0%
!!! ATTCGTGGTTTTATGGTGAT+GGG - Chr8:19351489-19351508 MsG0880043125.01.T01:intron 35.0%
AAACTGGTTGCATCACTATG+TGG - Chr8:19352280-19352299 MsG0880043125.01.T01:CDS 40.0%
AACAACTCTCATCGTTCCTT+CGG - Chr8:19350006-19350025 MsG0880043125.01.T01:three_prime_UTR 40.0%
AACCTCTTACCATGGATCAT+CGG - Chr8:19350089-19350108 MsG0880043125.01.T01:three_prime_UTR 40.0%
AAGATTGGAGATGACAGAGA+TGG - Chr8:19351368-19351387 MsG0880043125.01.T01:CDS 40.0%
ACCCAGTATTTGCAGATACT+CGG + Chr8:19351428-19351447 None:intergenic 40.0%
ACCGAGTATCTGCAAATACT+GGG - Chr8:19351424-19351443 MsG0880043125.01.T01:intron 40.0%
AGATGTTGTATTCAGGATCC+CGG - Chr8:19352344-19352363 MsG0880043125.01.T01:CDS 40.0%
AGATTGGAGATGACAGAGAT+GGG - Chr8:19351369-19351388 MsG0880043125.01.T01:CDS 40.0%
AGCATTATGATATCCAGCGT+TGG + Chr8:19350979-19350998 None:intergenic 40.0%
AGGATGGTGTAATTTCTGCA+TGG - Chr8:19352227-19352246 MsG0880043125.01.T01:CDS 40.0%
AGTGCCAGAATTTACATTCG+TGG - Chr8:19351474-19351493 MsG0880043125.01.T01:intron 40.0%
AGTGGCATATTCACACAATG+TGG - Chr8:19352672-19352691 MsG0880043125.01.T01:intron 40.0%
ATCATAATGCTGCATGGAAG+CGG - Chr8:19350988-19351007 MsG0880043125.01.T01:intron 40.0%
CAAACTTTATTCTGGCAGCA+CGG - Chr8:19351702-19351721 MsG0880043125.01.T01:intron 40.0%
CATCAACACATTGACCAGTA+CGG + Chr8:19351753-19351772 None:intergenic 40.0%
CCGGTCTTGAATAGAAAGAT+TGG - Chr8:19351353-19351372 MsG0880043125.01.T01:CDS 40.0%
CCTATAATATTCTGCTCTGC+CGG - Chr8:19352884-19352903 MsG0880043125.01.T01:intron 40.0%
CCTTACCAAACATAACACGA+AGG - Chr8:19351121-19351140 MsG0880043125.01.T01:CDS 40.0%
CCTTCGTGTTATGTTTGGTA+AGG + Chr8:19351124-19351143 None:intergenic 40.0%
CGATAAAGATGAGAATCCGA+AGG + Chr8:19350025-19350044 None:intergenic 40.0%
CTATACAGATTTGCAGAGAG+GGG - Chr8:19353032-19353051 MsG0880043125.01.T01:intron 40.0%
CTGGATATCATAATGCTGCA+TGG - Chr8:19350982-19351001 MsG0880043125.01.T01:intron 40.0%
GAATGTCTTCGCATTAGGTT+TGG + Chr8:19351177-19351196 None:intergenic 40.0%
GATACTCATACACTCTTAGC+TGG - Chr8:19352040-19352059 MsG0880043125.01.T01:CDS 40.0%
GCACTATGAAGAAACCTACA+AGG + Chr8:19350927-19350946 None:intergenic 40.0%
GGATCCTGAATACAACATCT+TGG + Chr8:19352344-19352363 None:intergenic 40.0%
GGCAAACAACAGATTTAGTG+TGG + Chr8:19352306-19352325 None:intergenic 40.0%
GTAGAACTGAACAAGTCATC+GGG - Chr8:19350859-19350878 MsG0880043125.01.T01:intron 40.0%
GTGAATGACAGTTGTGTTCA+TGG - Chr8:19351446-19351465 MsG0880043125.01.T01:intron 40.0%
GTTGGAAGAATACAAGGTTG+TGG - Chr8:19353154-19353173 MsG0880043125.01.T01:intron 40.0%
GTTTACGATTCGCGACATTA+TGG - Chr8:19350385-19350404 MsG0880043125.01.T01:intron 40.0%
TACCTTAATGGTTTGATCCC+GGG + Chr8:19352365-19352384 None:intergenic 40.0%
TACGATTCAACCTCTTACCA+TGG - Chr8:19350081-19350100 MsG0880043125.01.T01:three_prime_UTR 40.0%
TAGGATAAAGTGGCTGATCT+TGG - Chr8:19350765-19350784 MsG0880043125.01.T01:CDS 40.0%
TCAAAACAAAGCAGGGACTT+TGG - Chr8:19352648-19352667 MsG0880043125.01.T01:intron 40.0%
TCCATCAAGAGTAAAAGGTG+CGG + Chr8:19351984-19352003 None:intergenic 40.0%
TCCTCAATAGCAAAGCTTGA+GGG - Chr8:19351515-19351534 MsG0880043125.01.T01:intron 40.0%
TGGCTGATCTTGGATGTTAT+TGG - Chr8:19350775-19350794 MsG0880043125.01.T01:CDS 40.0%
TTCCTCAATAGCAAAGCTTG+AGG - Chr8:19351514-19351533 MsG0880043125.01.T01:intron 40.0%
TTCTCATCTTTATCGCTCTC+AGG - Chr8:19350030-19350049 MsG0880043125.01.T01:three_prime_UTR 40.0%
TTGTGGTATTTGTGAAGGCA+TGG - Chr8:19351945-19351964 MsG0880043125.01.T01:CDS 40.0%
! AGCCAATTCCCCTTTTAAAC+TGG - Chr8:19352264-19352283 MsG0880043125.01.T01:CDS 40.0%
! AGGATACAGTGGCTGATTTA+GGG - Chr8:19350363-19350382 MsG0880043125.01.T01:intron 40.0%
! AGTCACCTCCCTTATTTGTT+GGG - Chr8:19352576-19352595 MsG0880043125.01.T01:intron 40.0%
! GACCGGTTCAGTATTATGTT+TGG + Chr8:19351339-19351358 None:intergenic 40.0%
! GATACAGTGAATTGGGGTTT+TGG - Chr8:19350494-19350513 MsG0880043125.01.T01:CDS 40.0%
! GGTATTCGATTGTTGTTGGT+AGG - Chr8:19350746-19350765 MsG0880043125.01.T01:CDS 40.0%
! GTCTGGTTTCAAAACAAAGC+AGG - Chr8:19352640-19352659 MsG0880043125.01.T01:intron 40.0%
! TATTTGCAGATACTCGGTGA+AGG + Chr8:19351422-19351441 None:intergenic 40.0%
! TGGGACAAGTTCTTGTTATC+CGG - Chr8:19352595-19352614 MsG0880043125.01.T01:intron 40.0%
! TTAGTTGATATAGCTCCAGG+CGG - Chr8:19353083-19353102 MsG0880043125.01.T01:intron 40.0%
!! GGATTAGTTGATATAGCTCC+AGG - Chr8:19353080-19353099 MsG0880043125.01.T01:intron 40.0%
!!! CATTCGTGGTTTTATGGTGA+TGG - Chr8:19351488-19351507 MsG0880043125.01.T01:intron 40.0%
!!! GTTTTGAAACCAGACCTTGA+TGG + Chr8:19352635-19352654 None:intergenic 40.0%
AAAGCTTGAGGGACACAAGA+AGG - Chr8:19351526-19351545 MsG0880043125.01.T01:CDS 45.0%
ACTGGAATGACAATTCCGGA+TGG - Chr8:19351673-19351692 MsG0880043125.01.T01:CDS 45.0%
AGAAGAAGAGCCTACCTTGA+CGG + Chr8:19351848-19351867 None:intergenic 45.0%
ATAGCATGGACTTGTCCCTT+AGG + Chr8:19352007-19352026 None:intergenic 45.0%
ATCCCGGGATCAAACCATTA+AGG - Chr8:19352360-19352379 MsG0880043125.01.T01:CDS 45.0%
ATGCAATTTCACCGTGCGAT+GGG + Chr8:19351019-19351038 None:intergenic 45.0%
CACCGAGTATCTGCAAATAC+TGG - Chr8:19351423-19351442 MsG0880043125.01.T01:intron 45.0%
CCATGCTATGATTGTTGCCA+AGG - Chr8:19352018-19352037 MsG0880043125.01.T01:CDS 45.0%
CCGGCAGAGCAGAATATTAT+AGG + Chr8:19352887-19352906 None:intergenic 45.0%
CCTTGGCAACAATCATAGCA+TGG + Chr8:19352021-19352040 None:intergenic 45.0%
CGAAGCAAATAAAGGTTCGC+CGG + Chr8:19350130-19350149 None:intergenic 45.0%
CTGCTGCAATTTGTGTTCCT+TGG - Chr8:19350413-19350432 MsG0880043125.01.T01:intron 45.0%
CTTCGCATTAGGTTTGGGAA+GGG + Chr8:19351171-19351190 None:intergenic 45.0%
CTTGTCCCAACAAATAAGGG+AGG + Chr8:19352584-19352603 None:intergenic 45.0%
GAAGCAAATAAAGGTTCGCC+GGG + Chr8:19350129-19350148 None:intergenic 45.0%
GAAGGAACGATGAGAGTTGT+TGG + Chr8:19350007-19350026 None:intergenic 45.0%
GAGGATACAGTGTTTGCATG+AGG - Chr8:19350343-19350362 MsG0880043125.01.T01:intron 45.0%
GAGGTGAACTGAATTGTCTC+CGG + Chr8:19352906-19352925 None:intergenic 45.0%
GATGTTGTATTCAGGATCCC+GGG - Chr8:19352345-19352364 MsG0880043125.01.T01:CDS 45.0%
GCAGGAGAGCAAAATGCAAT+TGG + Chr8:19353305-19353324 None:intergenic 45.0%
GCATTACAAGAAGCAGTTGC+CGG + Chr8:19350954-19350973 None:intergenic 45.0%
GCTACCCACACATTGCTTTA+TGG - Chr8:19352073-19352092 MsG0880043125.01.T01:CDS 45.0%
GGCTCCAAGATGTTGTATTC+AGG - Chr8:19352337-19352356 MsG0880043125.01.T01:CDS 45.0%
GGTGTAATTTCTGCATGGAG+AGG - Chr8:19352232-19352251 MsG0880043125.01.T01:CDS 45.0%
GTATTGTTGCCGATGATCCA+TGG + Chr8:19350101-19350120 None:intergenic 45.0%
GTGTTTGCATGAGGATACAG+TGG - Chr8:19350352-19350371 MsG0880043125.01.T01:intron 45.0%
TCATGGATGTGAAAGTGGCA+AGG - Chr8:19350832-19350851 MsG0880043125.01.T01:CDS 45.0%
TCTTCGCATTAGGTTTGGGA+AGG + Chr8:19351172-19351191 None:intergenic 45.0%
TGCAGCCTTCGTGTTATGTT+TGG + Chr8:19351129-19351148 None:intergenic 45.0%
TTCATCTGACTGCACCATCA+AGG - Chr8:19352618-19352637 MsG0880043125.01.T01:intron 45.0%
TTCGCATTAGGTTTGGGAAG+GGG + Chr8:19351170-19351189 None:intergenic 45.0%
TTCTTCACTGGAGACAGAAC+TGG - Chr8:19353110-19353129 MsG0880043125.01.T01:intron 45.0%
TTTATTCTGGCAGCACGGAT+GGG - Chr8:19351707-19351726 MsG0880043125.01.T01:intron 45.0%
! CAGTCACCTCCCTTATTTGT+TGG - Chr8:19352575-19352594 MsG0880043125.01.T01:intron 45.0%
! CTGTTGTTTGCCTAGCTGTT+GGG - Chr8:19352314-19352333 MsG0880043125.01.T01:CDS 45.0%
! GAGGATACAGTGGCTGATTT+AGG - Chr8:19350362-19350381 MsG0880043125.01.T01:intron 45.0%
! GTTTGCTGACAGTCTGGAAA+TGG - Chr8:19353132-19353151 MsG0880043125.01.T01:intron 45.0%
! TCTGTTGTTTGCCTAGCTGT+TGG - Chr8:19352313-19352332 MsG0880043125.01.T01:CDS 45.0%
! TGTTGTTTGCCTAGCTGTTG+GGG - Chr8:19352315-19352334 MsG0880043125.01.T01:CDS 45.0%
!! ACATGTGTTTATTGGCTCGC+TGG - Chr8:19350885-19350904 MsG0880043125.01.T01:intron 45.0%
!! AGGGTGTTGTTACACTCTCT+GGG - Chr8:19352840-19352859 MsG0880043125.01.T01:intron 45.0%
!! CATGTGTTTATTGGCTCGCT+GGG - Chr8:19350886-19350905 MsG0880043125.01.T01:intron 45.0%
!! TCCCTCAAGCTTTGCTATTG+AGG + Chr8:19351519-19351538 None:intergenic 45.0%
AGCAAGCACAGAAGTTGCTG+AGG - Chr8:19351304-19351323 MsG0880043125.01.T01:intron 50.0%
ATGAAGGACACCGTCAAGGT+AGG - Chr8:19351835-19351854 MsG0880043125.01.T01:CDS 50.0%
ATGTGTCAAGGTCCCAAACC+TGG + Chr8:19352519-19352538 None:intergenic 50.0%
ATTCCTCTTTCGCTTCCACC+AGG - Chr8:19353203-19353222 MsG0880043125.01.T01:intron 50.0%
ATTCCTGGTGGAAGCGAAAG+AGG + Chr8:19353209-19353228 None:intergenic 50.0%
CCACTTTGTCGTGACTCAAG+AGG + Chr8:19353183-19353202 None:intergenic 50.0%
CCTCTTGAGTCACGACAAAG+TGG - Chr8:19353180-19353199 MsG0880043125.01.T01:intron 50.0%
CTTACGATGGCAGTTCGTAG+AGG + Chr8:19352925-19352944 None:intergenic 50.0%
CTTTATTCTGGCAGCACGGA+TGG - Chr8:19351706-19351725 MsG0880043125.01.T01:intron 50.0%
GATGCAATTTCACCGTGCGA+TGG + Chr8:19351020-19351039 None:intergenic 50.0%
GATGGTGCAGTCAGATGAAC+CGG + Chr8:19352617-19352636 None:intergenic 50.0%
GCTGACAGTCTGGAAATGGT+TGG - Chr8:19353136-19353155 MsG0880043125.01.T01:intron 50.0%
GGGGGTAATCGAGATAACGA+TGG - Chr8:19350214-19350233 MsG0880043125.01.T01:CDS 50.0%
GTACCAGCTCTGCATGAAGA+CGG + Chr8:19351047-19351066 None:intergenic 50.0%
GTTGTTTGCCTAGCTGTTGG+GGG - Chr8:19352316-19352335 MsG0880043125.01.T01:CDS 50.0%
GTTTCTTCATAGTGCAGCGC+CGG - Chr8:19350932-19350951 MsG0880043125.01.T01:intron 50.0%
TACACTCTTAGCTGGAGCAG+AGG - Chr8:19352048-19352067 MsG0880043125.01.T01:CDS 50.0%
TATCCGTCTTCATGCAGAGC+TGG - Chr8:19351041-19351060 MsG0880043125.01.T01:CDS 50.0%
TCGGCAACAATACGTGTTCC+CGG - Chr8:19350108-19350127 MsG0880043125.01.T01:three_prime_UTR 50.0%
TCTTCATGCAGAGCTGGTAC+TGG - Chr8:19351047-19351066 MsG0880043125.01.T01:CDS 50.0%
TCTTGTAATGCTGCCAACGC+TGG - Chr8:19350963-19350982 MsG0880043125.01.T01:intron 50.0%
TGCCGATGATCCATGGTAAG+AGG + Chr8:19350094-19350113 None:intergenic 50.0%
TGGTATGAAGGACACCGTCA+AGG - Chr8:19351831-19351850 MsG0880043125.01.T01:CDS 50.0%
! AGGCACAGCTCAAGTTGTTG+AGG - Chr8:19351223-19351242 MsG0880043125.01.T01:intron 50.0%
! CAAAGCAGGGACTTTGGAAG+TGG - Chr8:19352654-19352673 MsG0880043125.01.T01:intron 50.0%
! GAGGGCCCATGGATTTTTGT+TGG - Chr8:19351811-19351830 MsG0880043125.01.T01:intron 50.0%
! GCCGCACCTTTTACTCTTGA+TGG - Chr8:19351980-19351999 MsG0880043125.01.T01:CDS 50.0%
!! CAGGGTGTTGTTACACTCTC+TGG - Chr8:19352839-19352858 MsG0880043125.01.T01:intron 50.0%
!! GAACTGGTTTGCTGACAGTC+TGG - Chr8:19353126-19353145 MsG0880043125.01.T01:intron 50.0%
AAGCGGCATTACCCATCGCA+CGG - Chr8:19351005-19351024 MsG0880043125.01.T01:CDS 55.0%
CTGACTGCACCATCAAGGTC+TGG - Chr8:19352623-19352642 MsG0880043125.01.T01:intron 55.0%
CTTTGATCAGTGAGGGCCCA+TGG - Chr8:19351800-19351819 MsG0880043125.01.T01:intron 55.0%
GGATGGGACACTTCGGACAT+GGG - Chr8:19351723-19351742 MsG0880043125.01.T01:intron 55.0%
TGGGCCCTCACTGATCAAAG+AGG + Chr8:19351800-19351819 None:intergenic 55.0%
CCAGGCGGTCTCTTCTTCAC+TGG - Chr8:19353098-19353117 MsG0880043125.01.T01:intron 60.0%
CCAGTGAAGAAGAGACCGCC+TGG + Chr8:19353101-19353120 None:intergenic 60.0%
CGGATGGGACACTTCGGACA+TGG - Chr8:19351722-19351741 MsG0880043125.01.T01:intron 60.0%
GCAGCACGGATGGGACACTT+CGG - Chr8:19351716-19351735 MsG0880043125.01.T01:intron 60.0%
TCTTGGAGCCCCCAACAGCT+AGG + Chr8:19352327-19352346 None:intergenic 60.0%
CGGACATGGGACTGCCGTAC+TGG - Chr8:19351736-19351755 MsG0880043125.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 19349975 19353400 19349975 ID=MsG0880043125.01;Name=MsG0880043125.01
Chr8 mRNA 19349975 19353400 19349975 ID=MsG0880043125.01.T01;Parent=MsG0880043125.01;Name=MsG0880043125.01.T01;_AED=0.23;_eAED=0.23;_QI=90|1|1|1|0.85|0.75|8|213|528
Chr8 exon 19351828 19352554 19351828 ID=MsG0880043125.01.T01:exon:5071;Parent=MsG0880043125.01.T01
Chr8 exon 19353324 19353400 19353324 ID=MsG0880043125.01.T01:exon:5070;Parent=MsG0880043125.01.T01
Chr8 five_prime_UTR 19353324 19353400 19353324 ID=MsG0880043125.01.T01:five_prime_utr;Parent=MsG0880043125.01.T01
Chr8 five_prime_UTR 19352542 19352554 19352542 ID=MsG0880043125.01.T01:five_prime_utr;Parent=MsG0880043125.01.T01
Chr8 CDS 19351828 19352541 19351828 ID=MsG0880043125.01.T01:cds;Parent=MsG0880043125.01.T01
Chr8 CDS 19351523 19351708 19351523 ID=MsG0880043125.01.T01:cds;Parent=MsG0880043125.01.T01
Chr8 CDS 19351306 19351413 19351306 ID=MsG0880043125.01.T01:cds;Parent=MsG0880043125.01.T01
Chr8 CDS 19350994 19351146 19350994 ID=MsG0880043125.01.T01:cds;Parent=MsG0880043125.01.T01
Chr8 CDS 19350676 19350855 19350676 ID=MsG0880043125.01.T01:cds;Parent=MsG0880043125.01.T01
Chr8 CDS 19350436 19350533 19350436 ID=MsG0880043125.01.T01:cds;Parent=MsG0880043125.01.T01
Chr8 CDS 19350188 19350335 19350188 ID=MsG0880043125.01.T01:cds;Parent=MsG0880043125.01.T01
Chr8 three_prime_UTR 19349975 19350187 19349975 ID=MsG0880043125.01.T01:three_prime_utr;Parent=MsG0880043125.01.T01
Chr8 mRNA 19349975 19353396 19349975 ID=MsG0880043125.01.T02;Parent=MsG0880043125.01;Name=MsG0880043125.01.T02;_AED=0.12;_eAED=0.12;_QI=855|1|1|1|1|1|7|213|528
Chr8 exon 19351828 19353396 19351828 ID=MsG0880043125.01.T02:exon:5078;Parent=MsG0880043125.01.T02
Chr8 five_prime_UTR 19352542 19353396 19352542 ID=MsG0880043125.01.T02:five_prime_utr;Parent=MsG0880043125.01.T02
Chr8 CDS 19351828 19352541 19351828 ID=MsG0880043125.01.T02:cds;Parent=MsG0880043125.01.T02
Chr8 CDS 19351523 19351708 19351523 ID=MsG0880043125.01.T02:cds;Parent=MsG0880043125.01.T02
Chr8 CDS 19351306 19351413 19351306 ID=MsG0880043125.01.T02:cds;Parent=MsG0880043125.01.T02
Chr8 CDS 19350994 19351146 19350994 ID=MsG0880043125.01.T02:cds;Parent=MsG0880043125.01.T02
Chr8 CDS 19350676 19350855 19350676 ID=MsG0880043125.01.T02:cds;Parent=MsG0880043125.01.T02
Chr8 CDS 19350436 19350533 19350436 ID=MsG0880043125.01.T02:cds;Parent=MsG0880043125.01.T02
Chr8 CDS 19350188 19350335 19350188 ID=MsG0880043125.01.T02:cds;Parent=MsG0880043125.01.T02
Chr8 three_prime_UTR 19349975 19350187 19349975 ID=MsG0880043125.01.T02:three_prime_utr;Parent=MsG0880043125.01.T02
Gene Sequence

>MsG0880043125.01.T02

ATGGATGTGAAAGTGGCAAGGAGTAGTAGAACTGAACAAGTCATCGGGAAAACATGTGTTTATTGGCTCGCTGGGAAATGCAACAGAAATCCTTGTAGGTTTCTTCATAGTGCAGCGCCGGCAACTGCTTCTTGTAATGCTGCCAACGCTGGATATCATAATGCTGCATGGAAGCGGCATTACCCATCGCACGGTGAAATTGCATCTTATCCGTCTTCATGCAGAGCTGGTACTGGATATTATAATGCTGCAAAGAAGCACCATTCATCGTATGTGTATGAGAAGCCCCTTACCAAACATAACACGAAGGCTGCATCGTATGTGTATGAGAAGCCCCTTCCCAAACCTAATGCGAAGACATTCTTGAATAGAAAGATTGGAGATAACAAAGGCACAGCTCAAGTTGTTGAGGCTTCCTTTTCCAAACATAATACGAAGACTGTCTTGAATAGAAAGACTGGAGATAACAAAGCAAGCACAGAAGTTGCTGAGGCTTCCCTTCCCAAACATAATACTGAACCGGTCTTGAATAGAAAGATTGGAGATGACAGAGATGGGACAGAAGTAGATGAAGTTTCTCAGAAGCCTTCACCGAGTATCTGCAAATACTGGGTGAATGACAGTTGTGTTCATGGTGATCAGTGCCAGAATTTACATTCGTGGTTTTATGGTGATGGGTTTTCCTCAATAGCAAAGCTTGAGGGACACAAGAAGCTTATCACTGGAATGACAATTCCGGATGGATCAGACAAACTTTATTCTGGCAGCACGGATGGGACACTTCGGACATGGGACTGCCGTACTGGTCAATGTGTTGATGTAACGAATCTGGGCGCTGAAATTACCTCTTTGATCAGTGAGGGCCCATGGATTTTTGTTGGTATGAAGGACACCGTCAAGGCATGGCATATTTCAACTGCCGCACCTTTTACTCTTGATGGACCTAAGGGACAAGTCCATGCTATGATTGTTGCCAAGGATACTCATACACTCTTAGCTGGAGCAGAGGATGGTGTAATTTCTGCATGGAGAGGCAGCTCCGAAGCCAATTCCCCTTTTAAACTGGTTGCATCACTATGTGGCCACACTAAATCTGTTGTTTGCCTAGCTGTTGGGGGCTCCAAGATGTTGTATTCAGGATCCCGGGATCAAACCATTAAGGTTTGGGACCTTGACACATTTGAGTGTACAATGACACTCAATGCACATACAGATGCAGTCACCTCCCTTATTTGTTGGGACAAGTTCTTGTTATCCGGTTCATCTGACTGCACCATCAAGGTCTGGTTTCAAAACAAAGCAGGGACTTTGGAAGTGGCATATTCACACAATGTGGAAAATGGTGTTGTTACACTCTCTGGGATGACTGATCCAGAAAATAAGCCTATAATATTCTGCTCTGCCGGAGACAATTCAGTTCACCTCTACGAACTGCCATCATTTGCAGAGAGGGGTAGATTGTTTGCAAAGCAAGAAGTTGGATTAGTTGATATAGCTCCAGGCGGTCTCTTCTTCACTGGAGACAGAACTGGTTTGCTGACAGTCTGGAAATGGTTGGAAGAATACAAGGTTGTGGCATCCTCTTGA

>MsG0880043125.01.T01

ATGGATGTGAAAGTGGCAAGGAGTAGTAGAACTGAACAAGTCATCGGGAAAACATGTGTTTATTGGCTCGCTGGGAAATGCAACAGAAATCCTTGTAGGTTTCTTCATAGTGCAGCGCCGGCAACTGCTTCTTGTAATGCTGCCAACGCTGGATATCATAATGCTGCATGGAAGCGGCATTACCCATCGCACGGTGAAATTGCATCTTATCCGTCTTCATGCAGAGCTGGTACTGGATATTATAATGCTGCAAAGAAGCACCATTCATCGTATGTGTATGAGAAGCCCCTTACCAAACATAACACGAAGGCTGCATCGTATGTGTATGAGAAGCCCCTTCCCAAACCTAATGCGAAGACATTCTTGAATAGAAAGATTGGAGATAACAAAGGCACAGCTCAAGTTGTTGAGGCTTCCTTTTCCAAACATAATACGAAGACTGTCTTGAATAGAAAGACTGGAGATAACAAAGCAAGCACAGAAGTTGCTGAGGCTTCCCTTCCCAAACATAATACTGAACCGGTCTTGAATAGAAAGATTGGAGATGACAGAGATGGGACAGAAGTAGATGAAGTTTCTCAGAAGCCTTCACCGAGTATCTGCAAATACTGGGTGAATGACAGTTGTGTTCATGGTGATCAGTGCCAGAATTTACATTCGTGGTTTTATGGTGATGGGTTTTCCTCAATAGCAAAGCTTGAGGGACACAAGAAGCTTATCACTGGAATGACAATTCCGGATGGATCAGACAAACTTTATTCTGGCAGCACGGATGGGACACTTCGGACATGGGACTGCCGTACTGGTCAATGTGTTGATGTAACGAATCTGGGCGCTGAAATTACCTCTTTGATCAGTGAGGGCCCATGGATTTTTGTTGGTATGAAGGACACCGTCAAGGCATGGCATATTTCAACTGCCGCACCTTTTACTCTTGATGGACCTAAGGGACAAGTCCATGCTATGATTGTTGCCAAGGATACTCATACACTCTTAGCTGGAGCAGAGGATGGTGTAATTTCTGCATGGAGAGGCAGCTCCGAAGCCAATTCCCCTTTTAAACTGGTTGCATCACTATGTGGCCACACTAAATCTGTTGTTTGCCTAGCTGTTGGGGGCTCCAAGATGTTGTATTCAGGATCCCGGGATCAAACCATTAAGGTTTGGGACCTTGACACATTTGAGTGTACAATGACACTCAATGCACATACAGATGCAGTCACCTCCCTTATTTGTTGGGACAAGTTCTTGTTATCCGGTTCATCTGACTGCACCATCAAGGTCTGGTTTCAAAACAAAGCAGGGACTTTGGAAGTGGCATATTCACACAATGTGGAAAATGGTGTTGTTACACTCTCTGGGATGACTGATCCAGAAAATAAGCCTATAATATTCTGCTCTGCCGGAGACAATTCAGTTCACCTCTACGAACTGCCATCATTTGCAGAGAGGGGTAGATTGTTTGCAAAGCAAGAAGTTGGATTAGTTGATATAGCTCCAGGCGGTCTCTTCTTCACTGGAGACAGAACTGGTTTGCTGACAGTCTGGAAATGGTTGGAAGAATACAAGGTTGTGGCATCCTCTTGA
Protein sequence

>MsG0880043125.01.T02

MDVKVARSSRTEQVIGKTCVYWLAGKCNRNPCRFLHSAAPATASCNAANAGYHNAAWKRHYPSHGEIASYPSSCRAGTGYYNAAKKHHSSYVYEKPLTKHNTKAASYVYEKPLPKPNAKTFLNRKIGDNKGTAQVVEASFSKHNTKTVLNRKTGDNKASTEVAEASLPKHNTEPVLNRKIGDDRDGTEVDEVSQKPSPSICKYWVNDSCVHGDQCQNLHSWFYGDGFSSIAKLEGHKKLITGMTIPDGSDKLYSGSTDGTLRTWDCRTGQCVDVTNLGAEITSLISEGPWIFVGMKDTVKAWHISTAAPFTLDGPKGQVHAMIVAKDTHTLLAGAEDGVISAWRGSSEANSPFKLVASLCGHTKSVVCLAVGGSKMLYSGSRDQTIKVWDLDTFECTMTLNAHTDAVTSLICWDKFLLSGSSDCTIKVWFQNKAGTLEVAYSHNVENGVVTLSGMTDPENKPIIFCSAGDNSVHLYELPSFAERGRLFAKQEVGLVDIAPGGLFFTGDRTGLLTVWKWLEEYKVVASS*

>MsG0880043125.01.T01

MDVKVARSSRTEQVIGKTCVYWLAGKCNRNPCRFLHSAAPATASCNAANAGYHNAAWKRHYPSHGEIASYPSSCRAGTGYYNAAKKHHSSYVYEKPLTKHNTKAASYVYEKPLPKPNAKTFLNRKIGDNKGTAQVVEASFSKHNTKTVLNRKTGDNKASTEVAEASLPKHNTEPVLNRKIGDDRDGTEVDEVSQKPSPSICKYWVNDSCVHGDQCQNLHSWFYGDGFSSIAKLEGHKKLITGMTIPDGSDKLYSGSTDGTLRTWDCRTGQCVDVTNLGAEITSLISEGPWIFVGMKDTVKAWHISTAAPFTLDGPKGQVHAMIVAKDTHTLLAGAEDGVISAWRGSSEANSPFKLVASLCGHTKSVVCLAVGGSKMLYSGSRDQTIKVWDLDTFECTMTLNAHTDAVTSLICWDKFLLSGSSDCTIKVWFQNKAGTLEVAYSHNVENGVVTLSGMTDPENKPIIFCSAGDNSVHLYELPSFAERGRLFAKQEVGLVDIAPGGLFFTGDRTGLLTVWKWLEEYKVVASS*