AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039900.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039900.01.T01 MTR_7g081230 98.770 488 5 1 1 488 1 487 0.0 994
MsG0780039900.01.T01 MTR_7g081230 91.803 488 6 2 1 488 1 454 0.0 912
MsG0780039900.01.T01 MTR_7g081230 98.485 396 5 1 93 488 1 395 0.0 813
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039900.01.T01 AT2G44140 62.108 446 164 4 3 447 1 442 0.0 579
MsG0780039900.01.T01 AT2G44140 62.108 446 164 4 3 447 1 442 0.0 579
MsG0780039900.01.T01 AT2G44140 64.935 385 133 2 64 447 14 397 0.0 538
MsG0780039900.01.T01 AT2G44140 66.389 360 120 1 88 447 1 359 0.0 523
MsG0780039900.01.T01 AT3G59950 59.417 446 178 3 3 446 1 445 2.04e-178 509
MsG0780039900.01.T01 AT3G59950 66.295 359 121 0 88 446 1 359 5.20e-173 492
MsG0780039900.01.T01 AT2G44140 60.051 393 152 4 3 394 1 389 1.11e-171 489
MsG0780039900.01.T01 AT3G59950 57.722 395 162 4 3 394 1 393 5.70e-147 426
MsG0780039900.01.T01 AT3G59950 55.046 327 144 3 3 327 1 326 5.59e-108 325
MsG0780039900.01.T01 AT3G59950 63.008 246 91 0 88 333 1 246 1.83e-105 315

Find 148 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGCTATTTACGTTGTTTC+TGG 0.136184 7:-70259972 MsG0780039900.01.T01:CDS
AAGAAAAGTTGAGGAAATTT+TGG 0.152350 7:+70262304 None:intergenic
ACTCATTGTGATTCTTTCTT+TGG 0.167279 7:-70257882 MsG0780039900.01.T01:three_prime_UTR
TTATTGGTTCCTTTGGTTCT+TGG 0.178974 7:-70259843 MsG0780039900.01.T01:CDS
ACAATTCTGTAGCCAATAAA+AGG 0.199002 7:+70257777 None:intergenic
AGTATACTAGTGATGTTAAT+TGG 0.200002 7:-70260553 MsG0780039900.01.T01:CDS
ATTGACATCTTGCAACTATT+TGG 0.209877 7:-70260161 MsG0780039900.01.T01:CDS
TTTCAGGTTGTTAATATTAC+TGG 0.244997 7:-70258598 MsG0780039900.01.T01:intron
TATTGTAGCCCGGCATTTAT+AGG 0.248813 7:+70258022 None:intergenic
GCACTCTTCAAACGTTTAAT+AGG 0.250144 7:-70257920 MsG0780039900.01.T01:three_prime_UTR
CGGTTCAATGAGGAGATTTC+AGG 0.252524 7:-70260861 MsG0780039900.01.T01:CDS
TTGACCCATCTTTGGCTATT+GGG 0.264886 7:-70258364 MsG0780039900.01.T01:CDS
CGATTCAATTGACCCATCTT+TGG 0.284193 7:-70258372 MsG0780039900.01.T01:CDS
ATTGACCCATCTTTGGCTAT+TGG 0.286177 7:-70258365 MsG0780039900.01.T01:CDS
TCCTCAGAGCCTTGGAATCT+TGG 0.287803 7:-70259152 MsG0780039900.01.T01:CDS
TTAAAAGTTGACTGCAATAA+AGG 0.294600 7:+70259178 None:intergenic
TGTTTACTCATTTGTTCATA+TGG 0.297579 7:-70257852 MsG0780039900.01.T01:three_prime_UTR
ATCGTGAATTGTTGTTCTTC+AGG 0.318462 7:+70262327 None:intergenic
CCTCAGAGCCTTGGAATCTT+GGG 0.320464 7:-70259151 MsG0780039900.01.T01:CDS
CTTCAAGCTGGTAAAGGTTA+TGG 0.328585 7:-70260101 MsG0780039900.01.T01:CDS
TGGTCAACCTTCTTTACATC+TGG 0.335280 7:-70260989 MsG0780039900.01.T01:CDS
GGTGCTTCGACATACATTAT+TGG 0.338715 7:-70259118 MsG0780039900.01.T01:CDS
CTAGCTGTTGGGTCATGGGT+GGG 0.361496 7:-70260077 MsG0780039900.01.T01:CDS
CTTGCTCATTCTTCTCCCTC+TGG 0.367196 7:+70260012 None:intergenic
ATGGTCTAGCTGTTGGGTCA+TGG 0.369139 7:-70260082 MsG0780039900.01.T01:CDS
GATGGCGATATATGGCTTCT+AGG 0.371719 7:-70260797 MsG0780039900.01.T01:CDS
GTATACTAGTGATGTTAATT+GGG 0.374403 7:-70260552 MsG0780039900.01.T01:CDS
GCCACGTAAAACATAGGATT+TGG 0.374857 7:+70261159 None:intergenic
CGAGCTCTGATGGCGATATA+TGG 0.389524 7:-70260805 MsG0780039900.01.T01:CDS
AGATTTCAGGAGCGTGTACT+AGG 0.390219 7:-70260848 MsG0780039900.01.T01:CDS
AAACTCTAAACAGCGTTTGC+AGG 0.391047 7:+70259899 None:intergenic
TGGTCTAGCTGTTGGGTCAT+GGG 0.397135 7:-70260081 MsG0780039900.01.T01:CDS
CAGTCAGATGCTTGTTGCTC+AGG 0.397178 7:-70260513 MsG0780039900.01.T01:intron
TTGTTTACCACTGCCGAGTT+TGG 0.402122 7:-70257964 MsG0780039900.01.T01:three_prime_UTR
TTTAAATTTCCTCAGAGCCT+TGG 0.405739 7:-70259160 MsG0780039900.01.T01:CDS
CAGTGATATGATGATGTATT+AGG 0.407404 7:+70258562 None:intergenic
TTTCAAGGGGCCTAGTTCCT+TGG 0.415808 7:-70259878 MsG0780039900.01.T01:CDS
GACTTGATAAAGTCAATCTA+AGG 0.424719 7:-70259821 MsG0780039900.01.T01:intron
TAGCTGTTGGGTCATGGGTG+GGG 0.425413 7:-70260076 MsG0780039900.01.T01:CDS
AGTTTCCCAAGGCTTCCTTA+TGG 0.427428 7:-70261009 MsG0780039900.01.T01:CDS
ACAGTTCATTCTCGAAATAG+TGG 0.430178 7:-70260917 MsG0780039900.01.T01:CDS
GCATCTTCAATGCAGACAAC+TGG 0.433087 7:+70259921 None:intergenic
TATTGAAGGATTTATGTGAT+AGG 0.437062 7:-70261126 MsG0780039900.01.T01:CDS
ATTTCACAGCATGAATCAAC+TGG 0.438381 7:-70260761 MsG0780039900.01.T01:CDS
AAAGGTTATGGTCTAGCTGT+TGG 0.438899 7:-70260089 MsG0780039900.01.T01:CDS
TTCTGCAAGCTTAGTTGCTC+GGG 0.438986 7:+70258209 None:intergenic
TGTAAAGAAGGTTGACCATA+AGG 0.441752 7:+70260994 None:intergenic
ATTGGTAGCGTACGTGGATA+AGG 0.442501 7:+70262257 None:intergenic
GAATTACTTGTGACTTGCAT+TGG 0.451605 7:+70258138 None:intergenic
AATTGTAGTGGATATTACTT+TGG 0.452497 7:-70257760 MsG0780039900.01.T01:three_prime_UTR
TGCAGATATTGACACAAACT+TGG 0.453753 7:-70261196 MsG0780039900.01.T01:intron
GACTGAGCTACAGTGAATAA+TGG 0.459266 7:+70258171 None:intergenic
AACCTTCTTCAAGCTGGTAA+AGG 0.461307 7:-70260107 MsG0780039900.01.T01:CDS
GTCACAAGTAATTCTGTGTC+AGG 0.467454 7:-70258129 MsG0780039900.01.T01:CDS
AATTACTTGTGACTTGCATT+GGG 0.467885 7:+70258139 None:intergenic
TCAATATATTCTTTATCCAC+TGG 0.468590 7:+70260179 None:intergenic
AACCTTTACCAGCTTGAAGA+AGG 0.471470 7:+70260105 None:intergenic
TTCAGGTTGTTAATATTACT+GGG 0.472342 7:-70258597 MsG0780039900.01.T01:intron
TGGCTTCATAATGGTATTGA+AGG 0.475033 7:-70261140 MsG0780039900.01.T01:exon
CTTCTGCAAGCTTAGTTGCT+CGG 0.477017 7:+70258208 None:intergenic
GGTTGACCATAAGGAAGCCT+TGG 0.480154 7:+70261003 None:intergenic
TAAAACCCAATAGCCAAAGA+TGG 0.484276 7:+70258359 None:intergenic
GTGCCCGCCTCTTCAAAGGC+AGG 0.484347 7:-70261046 MsG0780039900.01.T01:CDS
TCTAGCTGTTGGGTCATGGG+TGG 0.486738 7:-70260078 MsG0780039900.01.T01:CDS
CTTTGGCAATGTCAAATAAG+TGG 0.491327 7:-70257743 MsG0780039900.01.T01:three_prime_UTR
CATGTGCGACACATAGCATA+TGG 0.492479 7:+70260053 None:intergenic
TACCAGCTTGAAGAAGGTTG+TGG 0.493797 7:+70260111 None:intergenic
TATTGGTGTTCAGAATGATA+AGG 0.494330 7:-70259101 MsG0780039900.01.T01:CDS
AAGGTTATGGTCTAGCTGTT+GGG 0.496723 7:-70260088 MsG0780039900.01.T01:CDS
ATGAACCTTGTTAATGATGC+AGG 0.497704 7:-70258069 MsG0780039900.01.T01:CDS
CTGGCAATTCCTATAAATGC+CGG 0.502412 7:-70258031 MsG0780039900.01.T01:exon
CTTAAATTCATATTGTAGCC+CGG 0.502439 7:+70258012 None:intergenic
GGAATCTTGGGTGGAAAACC+AGG 0.509067 7:-70259139 MsG0780039900.01.T01:CDS
CATATGCTATGTGTCGCACA+TGG 0.515009 7:-70260052 MsG0780039900.01.T01:CDS
TTGTTTCTGGAGATGAAGAC+GGG 0.517401 7:-70259959 MsG0780039900.01.T01:CDS
ATCCACAACCTTCTTCAAGC+TGG 0.518114 7:-70260113 MsG0780039900.01.T01:CDS
GAAACAACGTAAATAGCCAT+TGG 0.522414 7:+70259975 None:intergenic
ACGTAAATAGCCATTGGAAG+TGG 0.524642 7:+70259981 None:intergenic
GAATTGCCAGTCATCCTCAT+TGG 0.525225 7:+70258044 None:intergenic
GTAGAGGTGTCCAAGGAACT+AGG 0.529590 7:+70259868 None:intergenic
GTTGACCATAAGGAAGCCTT+GGG 0.529980 7:+70261004 None:intergenic
CAGGCACCAATGAGGATGAC+TGG 0.535404 7:-70258050 MsG0780039900.01.T01:CDS
TGCCCGCCTCTTCAAAGGCA+GGG 0.539052 7:-70261045 MsG0780039900.01.T01:CDS
GACCCTGCCTTTGAAGAGGC+GGG 0.540202 7:+70261043 None:intergenic
TGGCAATTCCTATAAATGCC+GGG 0.541666 7:-70258030 MsG0780039900.01.T01:exon
TCAGGTGCCCGCCTCTTCAA+AGG 0.542478 7:-70261050 MsG0780039900.01.T01:CDS
TATACTAGTGATGTTAATTG+GGG 0.543594 7:-70260551 MsG0780039900.01.T01:CDS
CAATTCTGTAGCCAATAAAA+GGG 0.545788 7:+70257778 None:intergenic
CTGAGTATTATCAACAATCT+CGG 0.546723 7:+70261069 None:intergenic
GCTTAACTTCATGTGGATCA+AGG 0.546867 7:+70259071 None:intergenic
ATACATTTAACAGACCTTTG+CGG 0.548501 7:+70260669 None:intergenic
TATTCACTGTAGCTCAGTCT+AGG 0.548706 7:-70258167 MsG0780039900.01.T01:CDS
GCTGTGAGGAAAGTCGTTAG+TGG 0.549234 7:-70260884 MsG0780039900.01.T01:CDS
ATTTGTTCATATGGCTAACC+AGG 0.555159 7:-70257843 MsG0780039900.01.T01:three_prime_UTR
AGATGGGTCAATTGAATCGA+GGG 0.556578 7:+70258376 None:intergenic
AGAATGATGAAGAAAAGTTG+AGG 0.562264 7:+70262295 None:intergenic
TATGAAGCCACGTAAAACAT+AGG 0.563367 7:+70261153 None:intergenic
AGACTCCTAACAGCATTAGC+AGG 0.564665 7:-70258406 MsG0780039900.01.T01:intron
AGCGTGTACTAGGGTCATGC+AGG 0.568179 7:-70260838 MsG0780039900.01.T01:CDS
ACTGACGTTTCGAGCTCTGA+TGG 0.571376 7:-70260815 MsG0780039900.01.T01:CDS
CAGAGCCTTGGAATCTTGGG+TGG 0.572112 7:-70259148 MsG0780039900.01.T01:CDS
TATTGGCTACAGAATTGTAG+TGG 0.572874 7:-70257772 MsG0780039900.01.T01:three_prime_UTR
TTCACAAATTAGGTAGATCG+TGG 0.572926 7:-70260360 MsG0780039900.01.T01:CDS
GCAACTATTTGGTGATTCCG+AGG 0.577389 7:-70260150 MsG0780039900.01.T01:CDS
AGGAGAACAGCCACTTCCAA+TGG 0.580099 7:-70259991 MsG0780039900.01.T01:CDS
GCATCAACCAAACTCGGCAG+TGG 0.580682 7:+70257957 None:intergenic
CGAGATTGTTGATAATACTC+AGG 0.584823 7:-70261068 MsG0780039900.01.T01:CDS
AAAACCCAATAGCCAAAGAT+GGG 0.587146 7:+70258360 None:intergenic
GTTGTTTCTGGAGATGAAGA+CGG 0.587333 7:-70259960 MsG0780039900.01.T01:CDS
ATAACTGCAAACCTTTGTCT+CGG 0.588650 7:+70258333 None:intergenic
TTCATTCTCGAAATAGTGGG+TGG 0.591536 7:-70260913 MsG0780039900.01.T01:CDS
TAGAGTAGTTCATATTGTGA+TGG 0.592290 7:-70257720 MsG0780039900.01.T01:three_prime_UTR
GATTTCAGGAGCGTGTACTA+GGG 0.594031 7:-70260847 MsG0780039900.01.T01:CDS
TGATCCACATGAAGTTAAGC+CGG 0.594832 7:-70259068 MsG0780039900.01.T01:intron
CAGTTCATTCTCGAAATAGT+GGG 0.596526 7:-70260916 MsG0780039900.01.T01:CDS
AATAAAAGTAGAGGTGTCCA+AGG 0.596658 7:+70259861 None:intergenic
TGGTGCCTGCATCATTAACA+AGG 0.600444 7:+70258064 None:intergenic
AAGGAAATCAGAAATTGAGT+CGG 0.602363 7:-70262364 None:intergenic
TAGTGATAGTAAGTTTCCCA+AGG 0.604554 7:-70261020 MsG0780039900.01.T01:CDS
AAAGGAACCAATAAAAGTAG+AGG 0.608613 7:+70259852 None:intergenic
AAGCTTGCAGAAGAATCAAA+CGG 0.608695 7:-70258198 MsG0780039900.01.T01:CDS
CAGAGGGAGAAGAATGAGCA+AGG 0.610636 7:-70260011 MsG0780039900.01.T01:CDS
AGTCGAGCATCAACCAAACT+CGG 0.611468 7:+70257951 None:intergenic
AGACCCTGCCTTTGAAGAGG+CGG 0.611555 7:+70261042 None:intergenic
TGACGACACTAGATTTGAAG+AGG 0.616064 7:-70258106 MsG0780039900.01.T01:CDS
ACTAGACCCTGCCTTTGAAG+AGG 0.621051 7:+70261039 None:intergenic
CCCAAGATTCCAAGGCTCTG+AGG 0.622974 7:+70259151 None:intergenic
TTTAATGTACAATAAATACC+TGG 0.623565 7:+70257825 None:intergenic
AAGATGGGTCAATTGAATCG+AGG 0.626831 7:+70258375 None:intergenic
TTATCAAGTCCAAGAACCAA+AGG 0.627304 7:+70259834 None:intergenic
ATATTAATAACTTACCGCAA+AGG 0.627695 7:-70260683 MsG0780039900.01.T01:intron
GGAGATGAAGACGGGGAACG+AGG 0.630304 7:-70259951 MsG0780039900.01.T01:CDS
GATGAAGACGGGGAACGAGG+TGG 0.635819 7:-70259948 MsG0780039900.01.T01:CDS
ATAATGTATGTCGAAGCACC+TGG 0.644500 7:+70259121 None:intergenic
AGTTCTAGCTCGAAACCAGA+GGG 0.648181 7:-70260027 MsG0780039900.01.T01:CDS
TCATTCTCGAAATAGTGGGT+GGG 0.651636 7:-70260912 MsG0780039900.01.T01:CDS
CATACCGGCTTAACTTCATG+TGG 0.657684 7:+70259064 None:intergenic
AAGTTCTAGCTCGAAACCAG+AGG 0.660548 7:-70260028 MsG0780039900.01.T01:CDS
GTGAGGAAAGTCGTTAGTGG+CGG 0.662295 7:-70260881 MsG0780039900.01.T01:CDS
TCAGGTTGTTAATATTACTG+GGG 0.666493 7:-70258596 MsG0780039900.01.T01:intron
GATGGGTCAATTGAATCGAG+GGG 0.667908 7:+70258377 None:intergenic
TCGTTAGTGGCGGTTCAATG+AGG 0.671495 7:-70260871 MsG0780039900.01.T01:CDS
GTGGAGAAAATCTGTTGACA+AGG 0.675087 7:-70260341 MsG0780039900.01.T01:intron
ACTATTTGGTGATTCCGAGG+CGG 0.686375 7:-70260147 MsG0780039900.01.T01:CDS
ATATGCTATGTGTCGCACAT+GGG 0.694790 7:-70260051 MsG0780039900.01.T01:CDS
TAATGATGCAGGCACCAATG+AGG 0.734704 7:-70258058 MsG0780039900.01.T01:CDS
GTGGGTGGGCAGCTGCTGTG+AGG 0.740507 7:-70260898 MsG0780039900.01.T01:CDS
TGTTTCTGGAGATGAAGACG+GGG 0.752308 7:-70259958 MsG0780039900.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAAATGAATTAAGA+TGG + Chr7:70257820-70257839 None:intergenic 10.0%
!!! TTCAATATAAATTCTATTTT+GGG - Chr7:70257929-70257948 MsG0780039900.01.T01:three_prime_UTR 10.0%
!! CAAAATAGAATTTATATTGA+AGG + Chr7:70257930-70257949 None:intergenic 15.0%
!! TGATTTAAGAATTATGATAA+AGG + Chr7:70260379-70260398 None:intergenic 15.0%
!! TTTGAACAAACAATAAAATT+GGG + Chr7:70258246-70258265 None:intergenic 15.0%
!!! AAAAAAAATCAGAGATTTTA+AGG + Chr7:70259598-70259617 None:intergenic 15.0%
!!! CTTCAATATAAATTCTATTT+TGG - Chr7:70257928-70257947 MsG0780039900.01.T01:three_prime_UTR 15.0%
!!! TAATTGATAGTATAAGAAAA+GGG + Chr7:70260487-70260506 None:intergenic 15.0%
!!! TTTTGAACAAACAATAAAAT+TGG + Chr7:70258247-70258266 None:intergenic 15.0%
!!! TTTTTTTGTTTTGTTTAAGA+TGG - Chr7:70258110-70258129 MsG0780039900.01.T01:CDS 15.0%
!! AAAAGCCAAATTTATTGAAT+TGG - Chr7:70258264-70258283 MsG0780039900.01.T01:intron 20.0%
!! ACAAGCATAATCATATAAAA+AGG + Chr7:70260287-70260306 None:intergenic 20.0%
!! AGTTGTAAATTAAACAAAAC+TGG - Chr7:70261168-70261187 MsG0780039900.01.T01:five_prime_UTR 20.0%
!! ATCACTAAGTACATATTAAA+TGG - Chr7:70261409-70261428 MsG0780039900.01.T01:intron 20.0%
!! CACAAAAATAACAAAAACAA+AGG + Chr7:70259765-70259784 None:intergenic 20.0%
!! TAATAATCAGCTTATATGTT+TGG - Chr7:70258783-70258802 MsG0780039900.01.T01:intron 20.0%
!! TATCAAAAAAATGCTGAAAA+AGG + Chr7:70261002-70261021 None:intergenic 20.0%
!! TTGAACAAACAATAAAATTG+GGG + Chr7:70258245-70258264 None:intergenic 20.0%
!! TTTAATGTACAATAAATACC+TGG + Chr7:70262209-70262228 None:intergenic 20.0%
!!! AGTTTTGTTTAATTTACAAC+TGG + Chr7:70261169-70261188 None:intergenic 20.0%
!!! GTAATTGATAGTATAAGAAA+AGG + Chr7:70260488-70260507 None:intergenic 20.0%
!!! TTAAATTGTAGGACATTTTT+AGG - Chr7:70258384-70258403 MsG0780039900.01.T01:CDS 20.0%
!!! TTTTAATATGCATACCTTAT+AGG - Chr7:70259432-70259451 MsG0780039900.01.T01:intron 20.0%
! AAAACTGGCATCATATATAA+AGG - Chr7:70261183-70261202 MsG0780039900.01.T01:five_prime_UTR 25.0%
! AACCTACATGATTAAATTGT+AGG - Chr7:70258373-70258392 MsG0780039900.01.T01:CDS 25.0%
! AGAATAATTCAACTGGTTAA+AGG + Chr7:70258621-70258640 None:intergenic 25.0%
! AGATGTTATCTTTACACTAT+TGG - Chr7:70258748-70258767 MsG0780039900.01.T01:intron 25.0%
! AGTATACTAGTGATGTTAAT+TGG - Chr7:70259478-70259497 MsG0780039900.01.T01:intron 25.0%
! ATATTAATAACTTACCGCAA+AGG - Chr7:70259348-70259367 MsG0780039900.01.T01:intron 25.0%
! ATGGAAAATTGAAGAGAATA+AGG + Chr7:70257801-70257820 None:intergenic 25.0%
! CAAAAATCATCAAAATCATC+TGG + Chr7:70261800-70261819 None:intergenic 25.0%
! CAAATAAGCCAATATAAACA+TGG - Chr7:70260397-70260416 MsG0780039900.01.T01:intron 25.0%
! GAATAATTCAACTGGTTAAA+GGG + Chr7:70258620-70258639 None:intergenic 25.0%
! GCAAATTTCCATGTTTATAT+TGG + Chr7:70260408-70260427 None:intergenic 25.0%
! GTATACTAGTGATGTTAATT+GGG - Chr7:70259479-70259498 MsG0780039900.01.T01:intron 25.0%
! TATACTAGTGATGTTAATTG+GGG - Chr7:70259480-70259499 MsG0780039900.01.T01:intron 25.0%
! TATTGAAGGATTTATGTGAT+AGG - Chr7:70258905-70258924 MsG0780039900.01.T01:intron 25.0%
! TATTGAATTGGATCGAAATA+TGG - Chr7:70258276-70258295 MsG0780039900.01.T01:intron 25.0%
! TATTTATAATTTACAGCCAG+TGG - Chr7:70259836-70259855 MsG0780039900.01.T01:CDS 25.0%
! TCAATATATTCTTTATCCAC+TGG + Chr7:70259855-70259874 None:intergenic 25.0%
! TCGATCCAATTCAATAAATT+TGG + Chr7:70258272-70258291 None:intergenic 25.0%
! TGGAAAATTGAAGAGAATAA+GGG + Chr7:70257800-70257819 None:intergenic 25.0%
! TGTTTACTCATTTGTTCATA+TGG - Chr7:70262179-70262198 MsG0780039900.01.T01:intron 25.0%
! TTAAAAGTTGACTGCAATAA+AGG + Chr7:70260856-70260875 None:intergenic 25.0%
! TTGTGTAAAAGAATCCAAAT+AGG + Chr7:70260328-70260347 None:intergenic 25.0%
!! AAAGAGAGTGCAATATATAA+AGG - Chr7:70261212-70261231 MsG0780039900.01.T01:intron 25.0%
!! AAGAAAAGTTGAGGAAATTT+TGG + Chr7:70257730-70257749 None:intergenic 25.0%
!! ATTCATGCTGTGAAATTTTA+TGG + Chr7:70259266-70259285 None:intergenic 25.0%
!! ATTCTTTTACACAATAGAAG+TGG - Chr7:70260334-70260353 MsG0780039900.01.T01:intron 25.0%
!! GTACATATTAAATGGTTTTC+AGG - Chr7:70261417-70261436 MsG0780039900.01.T01:intron 25.0%
!!! AATTGTAGTGGATATTACTT+TGG - Chr7:70262271-70262290 MsG0780039900.01.T01:five_prime_UTR 25.0%
!!! GCATTACTTTTTCACAAATT+AGG - Chr7:70259661-70259680 MsG0780039900.01.T01:intron 25.0%
!!! TCTCAAAAGATTCCTTTTTT+GGG - Chr7:70257954-70257973 MsG0780039900.01.T01:three_prime_UTR 25.0%
!!! TTCAGGTTGTTAATATTACT+GGG - Chr7:70261434-70261453 MsG0780039900.01.T01:intron 25.0%
!!! TTTCAGGTTGTTAATATTAC+TGG - Chr7:70261433-70261452 MsG0780039900.01.T01:intron 25.0%
AAAGGAACCAATAAAAGTAG+AGG + Chr7:70260182-70260201 None:intergenic 30.0%
AATACTGCTTTGTCATATTC+AGG - Chr7:70259639-70259658 MsG0780039900.01.T01:intron 30.0%
AATTATCGTTATGCAAGTTC+TGG - Chr7:70261037-70261056 MsG0780039900.01.T01:CDS 30.0%
AATTGAAGAGAATAAGGGAT+TGG + Chr7:70257795-70257814 None:intergenic 30.0%
ACAATTCTGTAGCCAATAAA+AGG + Chr7:70262257-70262276 None:intergenic 30.0%
ACAGAGACACATCTATTAAT+AGG - Chr7:70260589-70260608 MsG0780039900.01.T01:intron 30.0%
ACTATCAATTACACCTGTTA+TGG - Chr7:70260496-70260515 MsG0780039900.01.T01:intron 30.0%
ACTCATTGTGATTCTTTCTT+TGG - Chr7:70262149-70262168 MsG0780039900.01.T01:intron 30.0%
AGAATGATGAAGAAAAGTTG+AGG + Chr7:70257739-70257758 None:intergenic 30.0%
AGATGAAGAAAACCCAAAAA+AGG + Chr7:70257969-70257988 None:intergenic 30.0%
ATACATTTAACAGACCTTTG+CGG + Chr7:70259365-70259384 None:intergenic 30.0%
ATTGACATCTTGCAACTATT+TGG - Chr7:70259870-70259889 MsG0780039900.01.T01:CDS 30.0%
CAACATTGACAAAGTAATGT+CGG + Chr7:70261773-70261792 None:intergenic 30.0%
CAATTCTGTAGCCAATAAAA+GGG + Chr7:70262256-70262275 None:intergenic 30.0%
CATCTAAACATCGCATAAAA+AGG + Chr7:70259392-70259411 None:intergenic 30.0%
CTGAGTATTATCAACAATCT+CGG + Chr7:70258965-70258984 None:intergenic 30.0%
CTTAAATTCATATTGTAGCC+CGG + Chr7:70262022-70262041 None:intergenic 30.0%
GACTTGATAAAGTCAATCTA+AGG - Chr7:70260210-70260229 MsG0780039900.01.T01:intron 30.0%
GATAAAGGAACTTGTCTTTA+CGG + Chr7:70260364-70260383 None:intergenic 30.0%
GGTATATATAGGATACCAAA+GGG - Chr7:70258337-70258356 MsG0780039900.01.T01:intron 30.0%
GTATATATAGGATACCAAAG+GGG - Chr7:70258338-70258357 MsG0780039900.01.T01:intron 30.0%
GTCCTACAATTTAATCATGT+AGG + Chr7:70258378-70258397 None:intergenic 30.0%
GTCTGTTTAGTGGTATATAT+AGG - Chr7:70258326-70258345 MsG0780039900.01.T01:intron 30.0%
GTTGATCATTAAATTGGACA+TGG - Chr7:70258561-70258580 MsG0780039900.01.T01:CDS 30.0%
TACATAGCAGAGATAATAAC+CGG - Chr7:70260683-70260702 MsG0780039900.01.T01:intron 30.0%
TAGAAAAGACTACACAATGA+TGG - Chr7:70261281-70261300 MsG0780039900.01.T01:intron 30.0%
TAGAGTAGTTCATATTGTGA+TGG - Chr7:70262311-70262330 MsG0780039900.01.T01:five_prime_UTR 30.0%
TGAAAAACCAGATGTAAAGA+AGG + Chr7:70259052-70259071 None:intergenic 30.0%
TGAATATGACAAAGCAGTAT+TGG + Chr7:70259640-70259659 None:intergenic 30.0%
TGCTATTATAAACTGTCATC+AGG - Chr7:70260824-70260843 MsG0780039900.01.T01:CDS 30.0%
TGGTATATATAGGATACCAA+AGG - Chr7:70258336-70258355 MsG0780039900.01.T01:intron 30.0%
TTAAAAACCAGACATGATTC+TGG - Chr7:70258433-70258452 MsG0780039900.01.T01:intron 30.0%
TTAAGTTACAACAAACAGCA+AGG + Chr7:70261346-70261365 None:intergenic 30.0%
TTAATAGATGTGTCTCTGTA+AGG + Chr7:70260588-70260607 None:intergenic 30.0%
TTCATCAATGCAGATTATGA+TGG - Chr7:70258661-70258680 MsG0780039900.01.T01:intron 30.0%
TTTGATTCAATGTCCATAAC+AGG + Chr7:70260512-70260531 None:intergenic 30.0%
! AATTACTTGTGACTTGCATT+GGG + Chr7:70261895-70261914 None:intergenic 30.0%
! ACAAAGGTTTGCAGTTATTT+TGG - Chr7:70261703-70261722 MsG0780039900.01.T01:intron 30.0%
! ATGTTTACATTTGAAGTGTG+AGG - Chr7:70258497-70258516 MsG0780039900.01.T01:intron 30.0%
! CAGATTATGATGGCATTTTA+GGG - Chr7:70258671-70258690 MsG0780039900.01.T01:intron 30.0%
! CAGTGATATGATGATGTATT+AGG + Chr7:70261472-70261491 None:intergenic 30.0%
! TATTGGTGTTCAGAATGATA+AGG - Chr7:70260930-70260949 MsG0780039900.01.T01:CDS 30.0%
! TCAGGTTGTTAATATTACTG+GGG - Chr7:70261435-70261454 MsG0780039900.01.T01:intron 30.0%
! TTGATAGTATAAGAAAAGGG+TGG + Chr7:70260484-70260503 None:intergenic 30.0%
! TTTGGCAACTAGTTTAATTG+TGG - Chr7:70261721-70261740 MsG0780039900.01.T01:intron 30.0%
!! TTGTTGATGAACCCTTTTAT+TGG - Chr7:70262242-70262261 MsG0780039900.01.T01:intron 30.0%
!!! CTCTCAAAAGATTCCTTTTT+TGG - Chr7:70257953-70257972 MsG0780039900.01.T01:three_prime_UTR 30.0%
!!! TCTACTTTTATTGGTTCCTT+TGG - Chr7:70260181-70260200 MsG0780039900.01.T01:CDS 30.0%
!!! TGTCTGGTTTTTAAGAAACA+TGG + Chr7:70258427-70258446 None:intergenic 30.0%
AAAACCCAATAGCCAAAGAT+GGG + Chr7:70261674-70261693 None:intergenic 35.0%
AAAAGGATTATCCTGCATAC+CGG + Chr7:70260985-70261004 None:intergenic 35.0%
AAACAGCAAGGAAACCAAAT+AGG + Chr7:70261334-70261353 None:intergenic 35.0%
AAAGATAGAAACTTCCCTGT+CGG - Chr7:70260529-70260548 MsG0780039900.01.T01:CDS 35.0%
AAATTGGACATGGAGTCAAA+GGG - Chr7:70258571-70258590 MsG0780039900.01.T01:CDS 35.0%
AAGCTTGCAGAAGAATCAAA+CGG - Chr7:70261833-70261852 MsG0780039900.01.T01:intron 35.0%
ACAGTTCATTCTCGAAATAG+TGG - Chr7:70259114-70259133 MsG0780039900.01.T01:CDS 35.0%
ATAACTGCAAACCTTTGTCT+CGG + Chr7:70261701-70261720 None:intergenic 35.0%
ATGAACCTTGTTAATGATGC+AGG - Chr7:70261962-70261981 MsG0780039900.01.T01:intron 35.0%
ATTTCACAGCATGAATCAAC+TGG - Chr7:70259270-70259289 MsG0780039900.01.T01:intron 35.0%
ATTTGTTCATATGGCTAACC+AGG - Chr7:70262188-70262207 MsG0780039900.01.T01:intron 35.0%
CAATTGCATCAAAGCCTATA+AGG + Chr7:70259449-70259468 None:intergenic 35.0%
CAGTTCATTCTCGAAATAGT+GGG - Chr7:70259115-70259134 MsG0780039900.01.T01:CDS 35.0%
CTTTGGCAATGTCAAATAAG+TGG - Chr7:70262288-70262307 MsG0780039900.01.T01:five_prime_UTR 35.0%
GAAACAACGTAAATAGCCAT+TGG + Chr7:70260059-70260078 None:intergenic 35.0%
GCAACACAGAATAATTCAAC+TGG + Chr7:70258628-70258647 None:intergenic 35.0%
GCACTCTTCAAACGTTTAAT+AGG - Chr7:70262111-70262130 MsG0780039900.01.T01:intron 35.0%
GTAAAAGAATCCAAATAGGC+AGG + Chr7:70260324-70260343 None:intergenic 35.0%
GTCAATATCTGCAAGTAAAG+AGG + Chr7:70258828-70258847 None:intergenic 35.0%
TAAAACCCAATAGCCAAAGA+TGG + Chr7:70261675-70261694 None:intergenic 35.0%
TAAACCAACGTTGAAGGAAA+AGG + Chr7:70257903-70257922 None:intergenic 35.0%
TAAATTGGACATGGAGTCAA+AGG - Chr7:70258570-70258589 MsG0780039900.01.T01:CDS 35.0%
TAGTATAAGAAAAGGGTGGA+AGG + Chr7:70260480-70260499 None:intergenic 35.0%
TAGTGATAGTAAGTTTCCCA+AGG - Chr7:70259011-70259030 MsG0780039900.01.T01:intron 35.0%
TATGAAGCCACGTAAAACAT+AGG + Chr7:70258881-70258900 None:intergenic 35.0%
TGCAGATATTGACACAAACT+TGG - Chr7:70258835-70258854 MsG0780039900.01.T01:intron 35.0%
TGTAAAGAAGGTTGACCATA+AGG + Chr7:70259040-70259059 None:intergenic 35.0%
TTATCAAGTCCAAGAACCAA+AGG + Chr7:70260200-70260219 None:intergenic 35.0%
TTCACAAATTAGGTAGATCG+TGG - Chr7:70259671-70259690 MsG0780039900.01.T01:intron 35.0%
TTGTACCATAGAACCTTGAA+AGG + Chr7:70260243-70260262 None:intergenic 35.0%
TTTAAATTTCCTCAGAGCCT+TGG - Chr7:70260871-70260890 MsG0780039900.01.T01:CDS 35.0%
TTTACAACTGGTGCTCATAT+TGG + Chr7:70261157-70261176 None:intergenic 35.0%
! AACATAGAAGTTTTACCGAC+AGG + Chr7:70260547-70260566 None:intergenic 35.0%
! ACATAGAAGTTTTACCGACA+GGG + Chr7:70260546-70260565 None:intergenic 35.0%
! ATCGTGAATTGTTGTTCTTC+AGG + Chr7:70257707-70257726 None:intergenic 35.0%
! ATGGCTATTTACGTTGTTTC+TGG - Chr7:70260059-70260078 MsG0780039900.01.T01:CDS 35.0%
! GAATTACTTGTGACTTGCAT+TGG + Chr7:70261896-70261915 None:intergenic 35.0%
! GCAGATTATGATGGCATTTT+AGG - Chr7:70258670-70258689 MsG0780039900.01.T01:intron 35.0%
! TAAAGTCAATCTAAGGTGTG+TGG - Chr7:70260217-70260236 MsG0780039900.01.T01:intron 35.0%
! TATTGGCTACAGAATTGTAG+TGG - Chr7:70262259-70262278 MsG0780039900.01.T01:intron 35.0%
! TGAGATGTATTTTCGTGCAT+AGG - Chr7:70261099-70261118 MsG0780039900.01.T01:CDS 35.0%
! TGGCTTCATAATGGTATTGA+AGG - Chr7:70258891-70258910 MsG0780039900.01.T01:intron 35.0%
! TGTTCAGACTGTTGTTTGAT+AGG - Chr7:70261373-70261392 MsG0780039900.01.T01:intron 35.0%
! TGTTTTACGTGGCTTCATAA+TGG - Chr7:70258882-70258901 MsG0780039900.01.T01:intron 35.0%
! TTAACCTTTTCCTTCAACGT+TGG - Chr7:70257896-70257915 MsG0780039900.01.T01:three_prime_UTR 35.0%
!! AACGCTGTTTAGAGTTTTCA+AGG - Chr7:70260138-70260157 MsG0780039900.01.T01:CDS 35.0%
!! AATAAAAGTAGAGGTGTCCA+AGG + Chr7:70260173-70260192 None:intergenic 35.0%
!! ACGCTGTTTAGAGTTTTCAA+GGG - Chr7:70260139-70260158 MsG0780039900.01.T01:CDS 35.0%
!! ATTGGTAGTGTTAGTTCGAA+AGG + Chr7:70259622-70259641 None:intergenic 35.0%
!! CGAGATTGTTGATAATACTC+AGG - Chr7:70258963-70258982 MsG0780039900.01.T01:intron 35.0%
!! TGAGGACTTTAACTTGACTT+GGG - Chr7:70258515-70258534 MsG0780039900.01.T01:intron 35.0%
!! TTATTGGTTCCTTTGGTTCT+TGG - Chr7:70260188-70260207 MsG0780039900.01.T01:intron 35.0%
!! TTGGACACCTCTACTTTTAT+TGG - Chr7:70260172-70260191 MsG0780039900.01.T01:CDS 35.0%
!! TTGGTAGTGTTAGTTCGAAA+GGG + Chr7:70259621-70259640 None:intergenic 35.0%
!! TTTAACTTGACTTGGGCTTA+GGG - Chr7:70258522-70258541 MsG0780039900.01.T01:intron 35.0%
!! TTTCGTCGTTTTCGTTGTAA+AGG - Chr7:70257870-70257889 MsG0780039900.01.T01:three_prime_UTR 35.0%
!!! CACGAAAACTGTGTTTTTTC+AGG - Chr7:70258474-70258493 MsG0780039900.01.T01:intron 35.0%
AAACTCTAAACAGCGTTTGC+AGG + Chr7:70260135-70260154 None:intergenic 40.0%
AAAGGTTATGGTCTAGCTGT+TGG - Chr7:70259942-70259961 MsG0780039900.01.T01:CDS 40.0%
AACCTTCTTCAAGCTGGTAA+AGG - Chr7:70259924-70259943 MsG0780039900.01.T01:CDS 40.0%
AACCTTTACCAGCTTGAAGA+AGG + Chr7:70259929-70259948 None:intergenic 40.0%
AAGGTTATGGTCTAGCTGTT+GGG - Chr7:70259943-70259962 MsG0780039900.01.T01:CDS 40.0%
AATTGGACATGGAGTCAAAG+GGG - Chr7:70258572-70258591 MsG0780039900.01.T01:CDS 40.0%
ACGTAAATAGCCATTGGAAG+TGG + Chr7:70260053-70260072 None:intergenic 40.0%
AGAGATAATAACCGGTGTGA+TGG - Chr7:70260691-70260710 MsG0780039900.01.T01:CDS 40.0%
ATATGCCTGCTAATGCTGTT+AGG + Chr7:70261633-70261652 None:intergenic 40.0%
ATATGCTATGTGTCGCACAT+GGG - Chr7:70259980-70259999 MsG0780039900.01.T01:CDS 40.0%
ATATGTGTTGCCTGCCTATT+TGG - Chr7:70260311-70260330 MsG0780039900.01.T01:intron 40.0%
ATTATGTGCATCCATCACAC+CGG + Chr7:70260705-70260724 None:intergenic 40.0%
CTCTCGTGATGTAACATGAT+TGG - Chr7:70260633-70260652 MsG0780039900.01.T01:intron 40.0%
CTGGCAATTCCTATAAATGC+CGG - Chr7:70262000-70262019 MsG0780039900.01.T01:intron 40.0%
CTTCAAGCTGGTAAAGGTTA+TGG - Chr7:70259930-70259949 MsG0780039900.01.T01:CDS 40.0%
GAAAATCTGTTGACAAGGTC+AGG - Chr7:70259695-70259714 MsG0780039900.01.T01:intron 40.0%
GACTGAGCTACAGTGAATAA+TGG + Chr7:70261863-70261882 None:intergenic 40.0%
GCAAATGTGATAGCACTTAC+AGG - Chr7:70261062-70261081 MsG0780039900.01.T01:CDS 40.0%
GCCACGTAAAACATAGGATT+TGG + Chr7:70258875-70258894 None:intergenic 40.0%
GCCTTTGTGTTGAGGTATAA+CGG - Chr7:70259790-70259809 MsG0780039900.01.T01:intron 40.0%
GCTTAACTTCATGTGGATCA+AGG + Chr7:70260963-70260982 None:intergenic 40.0%
GGTGCTTCGACATACATTAT+TGG - Chr7:70260913-70260932 MsG0780039900.01.T01:CDS 40.0%
GTCACAAGTAATTCTGTGTC+AGG - Chr7:70261902-70261921 MsG0780039900.01.T01:intron 40.0%
GTGGAGAAAATCTGTTGACA+AGG - Chr7:70259690-70259709 MsG0780039900.01.T01:intron 40.0%
TATTCACTGTAGCTCAGTCT+AGG - Chr7:70261864-70261883 MsG0780039900.01.T01:intron 40.0%
TATTGTAGCCCGGCATTTAT+AGG + Chr7:70262012-70262031 None:intergenic 40.0%
TGACGACACTAGATTTGAAG+AGG - Chr7:70261925-70261944 MsG0780039900.01.T01:intron 40.0%
TGATCCACATGAAGTTAAGC+CGG - Chr7:70260963-70260982 MsG0780039900.01.T01:CDS 40.0%
TGGCAATTCCTATAAATGCC+GGG - Chr7:70262001-70262020 MsG0780039900.01.T01:intron 40.0%
TGGTCAACCTTCTTTACATC+TGG - Chr7:70259042-70259061 MsG0780039900.01.T01:intron 40.0%
TGTACTTCCAGAATCATGTC+TGG + Chr7:70258443-70258462 None:intergenic 40.0%
TGTTGAGGTATAACGGCATT+AGG - Chr7:70259797-70259816 MsG0780039900.01.T01:intron 40.0%
! ATAATGTATGTCGAAGCACC+TGG + Chr7:70260913-70260932 None:intergenic 40.0%
! CAACTAGTTTAATTGTGGCG+AGG - Chr7:70261726-70261745 MsG0780039900.01.T01:intron 40.0%
! GCCAAATCCTATGTTTTACG+TGG - Chr7:70258871-70258890 MsG0780039900.01.T01:intron 40.0%
! GGGAGGGTTGATCATTAAAT+TGG - Chr7:70258555-70258574 MsG0780039900.01.T01:intron 40.0%
! TTCATTCTCGAAATAGTGGG+TGG - Chr7:70259118-70259137 MsG0780039900.01.T01:CDS 40.0%
!! CGCTGTTTAGAGTTTTCAAG+GGG - Chr7:70260140-70260159 MsG0780039900.01.T01:CDS 40.0%
!! CTTTAACTTGACTTGGGCTT+AGG - Chr7:70258521-70258540 MsG0780039900.01.T01:intron 40.0%
!! GTGAGGACTTTAACTTGACT+TGG - Chr7:70258514-70258533 MsG0780039900.01.T01:intron 40.0%
!! GTTGTTTCTGGAGATGAAGA+CGG - Chr7:70260071-70260090 MsG0780039900.01.T01:CDS 40.0%
!! TCATGTAGGTTGACTTTTGC+CGG + Chr7:70258364-70258383 None:intergenic 40.0%
!! TCATTCTCGAAATAGTGGGT+GGG - Chr7:70259119-70259138 MsG0780039900.01.T01:CDS 40.0%
!! TTAACTTGACTTGGGCTTAG+GGG - Chr7:70258523-70258542 MsG0780039900.01.T01:intron 40.0%
!! TTGTTTCTGGAGATGAAGAC+GGG - Chr7:70260072-70260091 MsG0780039900.01.T01:CDS 40.0%
AATGATGGCCTAGTAGTGGT+TGG - Chr7:70261296-70261315 MsG0780039900.01.T01:intron 45.0%
ACACAATGATGGCCTAGTAG+TGG - Chr7:70261292-70261311 MsG0780039900.01.T01:intron 45.0%
AGACTCCTAACAGCATTAGC+AGG - Chr7:70261625-70261644 MsG0780039900.01.T01:intron 45.0%
AGTCGAGCATCAACCAAACT+CGG + Chr7:70262083-70262102 None:intergenic 45.0%
AGTTTCCCAAGGCTTCCTTA+TGG - Chr7:70259022-70259041 MsG0780039900.01.T01:intron 45.0%
ATATAGGATACCAAAGGGGC+CGG - Chr7:70258342-70258361 MsG0780039900.01.T01:intron 45.0%
ATCCACAACCTTCTTCAAGC+TGG - Chr7:70259918-70259937 MsG0780039900.01.T01:CDS 45.0%
ATGAAGTTAAGCCGGTATGC+AGG - Chr7:70260971-70260990 MsG0780039900.01.T01:CDS 45.0%
ATGATGGCCTAGTAGTGGTT+GGG - Chr7:70261297-70261316 MsG0780039900.01.T01:intron 45.0%
ATTGGACATGGAGTCAAAGG+GGG - Chr7:70258573-70258592 MsG0780039900.01.T01:CDS 45.0%
CATATGCTATGTGTCGCACA+TGG - Chr7:70259979-70259998 MsG0780039900.01.T01:CDS 45.0%
CATGTGCGACACATAGCATA+TGG + Chr7:70259981-70260000 None:intergenic 45.0%
CGGTTCAATGAGGAGATTTC+AGG - Chr7:70259170-70259189 MsG0780039900.01.T01:CDS 45.0%
CTTCTGCAAGCTTAGTTGCT+CGG + Chr7:70261826-70261845 None:intergenic 45.0%
GAATTGCCAGTCATCCTCAT+TGG + Chr7:70261990-70262009 None:intergenic 45.0%
GATGGCGATATATGGCTTCT+AGG - Chr7:70259234-70259253 MsG0780039900.01.T01:intron 45.0%
GCATCTTCAATGCAGACAAC+TGG + Chr7:70260113-70260132 None:intergenic 45.0%
GCCGTTATACCTCAACACAA+AGG + Chr7:70259794-70259813 None:intergenic 45.0%
GGCGTATAAACCAACGTTGA+AGG + Chr7:70257909-70257928 None:intergenic 45.0%
GGGAGGAGTGAAATCCTATT+TGG - Chr7:70261317-70261336 MsG0780039900.01.T01:intron 45.0%
GTTGACCATAAGGAAGCCTT+GGG + Chr7:70259030-70259049 None:intergenic 45.0%
TAATGATGCAGGCACCAATG+AGG - Chr7:70261973-70261992 MsG0780039900.01.T01:intron 45.0%
TACCAGCTTGAAGAAGGTTG+TGG + Chr7:70259923-70259942 None:intergenic 45.0%
TGGTGCCTGCATCATTAACA+AGG + Chr7:70261970-70261989 None:intergenic 45.0%
TGTCGTATGCGTCTGTTTAG+TGG - Chr7:70258316-70258335 MsG0780039900.01.T01:intron 45.0%
TGTGGCCTTTCAAGGTTCTA+TGG - Chr7:70260235-70260254 MsG0780039900.01.T01:intron 45.0%
TTCTGCAAGCTTAGTTGCTC+GGG + Chr7:70261825-70261844 None:intergenic 45.0%
TTGTTTACCACTGCCGAGTT+TGG - Chr7:70262067-70262086 MsG0780039900.01.T01:intron 45.0%
! AACACAGTTTTCGTGCCATC+TGG + Chr7:70258469-70258488 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr7:70261578-70261597 None:intergenic 45.0%
! ACTATTTGGTGATTCCGAGG+CGG - Chr7:70259884-70259903 MsG0780039900.01.T01:CDS 45.0%
! AGATTTCAGGAGCGTGTACT+AGG - Chr7:70259183-70259202 MsG0780039900.01.T01:CDS 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr7:70261579-70261598 None:intergenic 45.0%
! GATTTCAGGAGCGTGTACTA+GGG - Chr7:70259184-70259203 MsG0780039900.01.T01:CDS 45.0%
! GCAACTATTTGGTGATTCCG+AGG - Chr7:70259881-70259900 MsG0780039900.01.T01:CDS 45.0%
! GTTTTCCACCCAAGATTCCA+AGG + Chr7:70260891-70260910 None:intergenic 45.0%
! TCTGGAAGTACACATCCAGA+TGG - Chr7:70258451-70258470 MsG0780039900.01.T01:intron 45.0%
!! AAGTTCTAGCTCGAAACCAG+AGG - Chr7:70260003-70260022 MsG0780039900.01.T01:CDS 45.0%
!! AGTTCTAGCTCGAAACCAGA+GGG - Chr7:70260004-70260023 MsG0780039900.01.T01:CDS 45.0%
!! ATTGGTAGCGTACGTGGATA+AGG + Chr7:70257777-70257796 None:intergenic 45.0%
!! CATACCGGCTTAACTTCATG+TGG + Chr7:70260970-70260989 None:intergenic 45.0%
!! TGTTTCTGGAGATGAAGACG+GGG - Chr7:70260073-70260092 MsG0780039900.01.T01:CDS 45.0%
AGGAGAACAGCCACTTCCAA+TGG - Chr7:70260040-70260059 MsG0780039900.01.T01:CDS 50.0%
ATGGTCTAGCTGTTGGGTCA+TGG - Chr7:70259949-70259968 MsG0780039900.01.T01:CDS 50.0%
CAGAGGGAGAAGAATGAGCA+AGG - Chr7:70260020-70260039 MsG0780039900.01.T01:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr7:70261577-70261596 MsG0780039900.01.T01:intron 50.0%
CCTCAGAGCCTTGGAATCTT+GGG - Chr7:70260880-70260899 MsG0780039900.01.T01:CDS 50.0%
CTAAGGTGTGTGGCCTTTCA+AGG - Chr7:70260227-70260246 MsG0780039900.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + Chr7:70261574-70261593 None:intergenic 50.0%
CTTGCTCATTCTTCTCCCTC+TGG + Chr7:70260022-70260041 None:intergenic 50.0%
GATAGAAAAAGCAGCCGCCT+CGG + Chr7:70259901-70259920 None:intergenic 50.0%
GCTGTGAGGAAAGTCGTTAG+TGG - Chr7:70259147-70259166 MsG0780039900.01.T01:CDS 50.0%
GGAATCTTGGGTGGAAAACC+AGG - Chr7:70260892-70260911 MsG0780039900.01.T01:CDS 50.0%
GGTTGACCATAAGGAAGCCT+TGG + Chr7:70259031-70259050 None:intergenic 50.0%
GTGAGGAAAGTCGTTAGTGG+CGG - Chr7:70259150-70259169 MsG0780039900.01.T01:CDS 50.0%
GTGTCTCTGTAAGGCAGATG+AGG + Chr7:70260579-70260598 None:intergenic 50.0%
GTGTTTGCGCCTTTGTGTTG+AGG - Chr7:70259782-70259801 MsG0780039900.01.T01:intron 50.0%
TCCTCAGAGCCTTGGAATCT+TGG - Chr7:70260879-70260898 MsG0780039900.01.T01:CDS 50.0%
TCGTTAGTGGCGGTTCAATG+AGG - Chr7:70259160-70259179 MsG0780039900.01.T01:CDS 50.0%
TGGTCTAGCTGTTGGGTCAT+GGG - Chr7:70259950-70259969 MsG0780039900.01.T01:CDS 50.0%
TTATGCCGACCCCACTTAGT+GGG - Chr7:70261566-70261585 MsG0780039900.01.T01:intron 50.0%
TTGGACATGGAGTCAAAGGG+GGG - Chr7:70258574-70258593 MsG0780039900.01.T01:CDS 50.0%
TTTATGCCGACCCCACTTAG+TGG - Chr7:70261565-70261584 MsG0780039900.01.T01:intron 50.0%
TTTCAAGGGGCCTAGTTCCT+TGG - Chr7:70260153-70260172 MsG0780039900.01.T01:CDS 50.0%
! ACTAGACCCTGCCTTTGAAG+AGG + Chr7:70258995-70259014 None:intergenic 50.0%
! ACTGACGTTTCGAGCTCTGA+TGG - Chr7:70259216-70259235 MsG0780039900.01.T01:intron 50.0%
! CAGTCAGATGCTTGTTGCTC+AGG - Chr7:70259518-70259537 MsG0780039900.01.T01:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr7:70261580-70261599 None:intergenic 50.0%
! CGAGCTCTGATGGCGATATA+TGG - Chr7:70259226-70259245 MsG0780039900.01.T01:intron 50.0%
! GGGTTTTACTGCCGAGACAA+AGG - Chr7:70261687-70261706 MsG0780039900.01.T01:intron 50.0%
! TGGGCTTAGGGGATTTTGCT+GGG - Chr7:70258534-70258553 MsG0780039900.01.T01:intron 50.0%
! TTAGGGGATTTTGCTGGGGA+GGG - Chr7:70258539-70258558 MsG0780039900.01.T01:intron 50.0%
! TTGGGCTTAGGGGATTTTGC+TGG - Chr7:70258533-70258552 MsG0780039900.01.T01:intron 50.0%
!! GTAGAGGTGTCCAAGGAACT+AGG + Chr7:70260166-70260185 None:intergenic 50.0%
!! TAAGGGATTGGTAGCGTACG+TGG + Chr7:70257783-70257802 None:intergenic 50.0%
ACATGGAGTCAAAGGGGGGA+TGG - Chr7:70258578-70258597 MsG0780039900.01.T01:CDS 55.0%
AGCGTGTACTAGGGTCATGC+AGG - Chr7:70259193-70259212 MsG0780039900.01.T01:intron 55.0%
ATGGCCTAGTAGTGGTTGGG+AGG - Chr7:70261300-70261319 MsG0780039900.01.T01:intron 55.0%
CACTCCTCCCAACCACTACT+AGG + Chr7:70261307-70261326 None:intergenic 55.0%
CAGAGCCTTGGAATCTTGGG+TGG - Chr7:70260883-70260902 MsG0780039900.01.T01:CDS 55.0%
CAGGCACCAATGAGGATGAC+TGG - Chr7:70261981-70262000 MsG0780039900.01.T01:intron 55.0%
CCCAAGATTCCAAGGCTCTG+AGG + Chr7:70260883-70260902 None:intergenic 55.0%
CGACCCCACTTAGTGGGATA+AGG - Chr7:70261572-70261591 MsG0780039900.01.T01:intron 55.0%
CTAGCTGTTGGGTCATGGGT+GGG - Chr7:70259954-70259973 MsG0780039900.01.T01:CDS 55.0%
GCATCAACCAAACTCGGCAG+TGG + Chr7:70262077-70262096 None:intergenic 55.0%
GGGGGATGGAAAGTCTCGTT+TGG - Chr7:70258592-70258611 MsG0780039900.01.T01:CDS 55.0%
TAGCTGTTGGGTCATGGGTG+GGG - Chr7:70259955-70259974 MsG0780039900.01.T01:CDS 55.0%
TCTAGCTGTTGGGTCATGGG+TGG - Chr7:70259953-70259972 MsG0780039900.01.T01:CDS 55.0%
! AGACCCTGCCTTTGAAGAGG+CGG + Chr7:70258992-70259011 None:intergenic 55.0%
! CTTAGGGGATTTTGCTGGGG+AGG - Chr7:70258538-70258557 MsG0780039900.01.T01:intron 55.0%
! GGGCTTAGGGGATTTTGCTG+GGG - Chr7:70258535-70258554 MsG0780039900.01.T01:intron 55.0%
! TTGACTTTTGCCGGCCCCTT+TGG + Chr7:70258355-70258374 None:intergenic 55.0%
GATGAAGACGGGGAACGAGG+TGG - Chr7:70260083-70260102 MsG0780039900.01.T01:CDS 60.0%
GGAGATGAAGACGGGGAACG+AGG - Chr7:70260080-70260099 MsG0780039900.01.T01:CDS 60.0%
TCAGGTGCCCGCCTCTTCAA+AGG - Chr7:70258981-70259000 MsG0780039900.01.T01:intron 60.0%
TGCCCGCCTCTTCAAAGGCA+GGG - Chr7:70258986-70259005 MsG0780039900.01.T01:intron 60.0%
! GACCCTGCCTTTGAAGAGGC+GGG + Chr7:70258991-70259010 None:intergenic 60.0%
GTGCCCGCCTCTTCAAAGGC+AGG - Chr7:70258985-70259004 MsG0780039900.01.T01:intron 65.0%
GTGGGTGGGCAGCTGCTGTG+AGG - Chr7:70259133-70259152 MsG0780039900.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 70257671 70262382 70257671 ID=MsG0780039900.01;Name=MsG0780039900.01
Chr7 mRNA 70257671 70262382 70257671 ID=MsG0780039900.01.T01;Parent=MsG0780039900.01;Name=MsG0780039900.01.T01;_AED=0.44;_eAED=0.44;_QI=174|1|1|1|0.87|0.77|9|367|488
Chr7 exon 70257671 70258252 70257671 ID=MsG0780039900.01.T01:exon:13130;Parent=MsG0780039900.01.T01
Chr7 exon 70258345 70258415 70258345 ID=MsG0780039900.01.T01:exon:13129;Parent=MsG0780039900.01.T01
Chr7 exon 70258559 70258614 70258559 ID=MsG0780039900.01.T01:exon:13128;Parent=MsG0780039900.01.T01
Chr7 exon 70259069 70259207 70259069 ID=MsG0780039900.01.T01:exon:13127;Parent=MsG0780039900.01.T01
Chr7 exon 70259822 70260201 70259822 ID=MsG0780039900.01.T01:exon:13126;Parent=MsG0780039900.01.T01
Chr7 exon 70260342 70260392 70260342 ID=MsG0780039900.01.T01:exon:13125;Parent=MsG0780039900.01.T01
Chr7 exon 70260514 70260599 70260514 ID=MsG0780039900.01.T01:exon:13124;Parent=MsG0780039900.01.T01
Chr7 exon 70260684 70261213 70260684 ID=MsG0780039900.01.T01:exon:13123;Parent=MsG0780039900.01.T01
Chr7 exon 70262270 70262382 70262270 ID=MsG0780039900.01.T01:exon:13122;Parent=MsG0780039900.01.T01
Chr7 five_prime_UTR 70262270 70262382 70262270 ID=MsG0780039900.01.T01:five_prime_utr;Parent=MsG0780039900.01.T01
Chr7 five_prime_UTR 70261153 70261213 70261153 ID=MsG0780039900.01.T01:five_prime_utr;Parent=MsG0780039900.01.T01
Chr7 CDS 70260684 70261152 70260684 ID=MsG0780039900.01.T01:cds;Parent=MsG0780039900.01.T01
Chr7 CDS 70260514 70260599 70260514 ID=MsG0780039900.01.T01:cds;Parent=MsG0780039900.01.T01
Chr7 CDS 70260342 70260392 70260342 ID=MsG0780039900.01.T01:cds;Parent=MsG0780039900.01.T01
Chr7 CDS 70259822 70260201 70259822 ID=MsG0780039900.01.T01:cds;Parent=MsG0780039900.01.T01
Chr7 CDS 70259069 70259207 70259069 ID=MsG0780039900.01.T01:cds;Parent=MsG0780039900.01.T01
Chr7 CDS 70258559 70258614 70258559 ID=MsG0780039900.01.T01:cds;Parent=MsG0780039900.01.T01
Chr7 CDS 70258345 70258415 70258345 ID=MsG0780039900.01.T01:cds;Parent=MsG0780039900.01.T01
Chr7 CDS 70258038 70258252 70258038 ID=MsG0780039900.01.T01:cds;Parent=MsG0780039900.01.T01
Chr7 three_prime_UTR 70257671 70258037 70257671 ID=MsG0780039900.01.T01:three_prime_utr;Parent=MsG0780039900.01.T01
Gene Sequence

>MsG0780039900.01.T01

ATGGTATTGAAGGATTTATGTGATAGGATTGTTGCTGCAAAGTGTTCTTCTAAAAGCTCAACCGAGATTGTTGATAATACTCAGGTGCCCGCCTCTTCAAAGGCAGGGTCTAGTGATAGTAAGTTTCCCAAGGCTTCCTTATGGTCAACCTTCTTTACATCTGGTTTTTCAGTCGATGAAACATATAGTGAATCATCGTCTTCTGAAAAGAAAACAGTTCATTCTCGAAATAGTGGGTGGGCAGCTGCTGTGAGGAAAGTCGTTAGTGGCGGTTCAATGAGGAGATTTCAGGAGCGTGTACTAGGGTCATGCAGGACTGACGTTTCGAGCTCTGATGGCGATATATGGCTTCTAGGTGTCTGCCATAAAATTTCACAGCATGAATCAACTGGAGATGTAGATACTCGTAACGTGTTTGCAGCATTTGAGCAAGATTTTTTCTCTAAAATATTAATAACTTACCGCAAAGGCTTTGATGCAATTGAAGATTCAAAGTATACTAGTGATGTTAATTGGGGTTGTATGCTTCGAAGCAGTCAGATGCTTGTTGCTCAGGCATTACTTTTTCACAAATTAGGTAGATCGTGGAGAAAATCTGTTGACAAGCCAGTGGATAAAGAATATATTGACATCTTGCAACTATTTGGTGATTCCGAGGCGGCTGCTTTTTCTATCCACAACCTTCTTCAAGCTGGTAAAGGTTATGGTCTAGCTGTTGGGTCATGGGTGGGGCCATATGCTATGTGTCGCACATGGGAAGTTCTAGCTCGAAACCAGAGGGAGAAGAATGAGCAAGGAGAACAGCCACTTCCAATGGCTATTTACGTTGTTTCTGGAGATGAAGACGGGGAACGAGGTGGAGCGCCAGTTGTCTGCATTGAAGATGCCTGCAAACGCTGTTTAGAGTTTTCAAGGGGCCTAGTTCCTTGGACACCTCTACTTTTATTGGTTCCTTTGGTTCTTGGACTTGATAAAGTCAATCTAAGGTACATTCCTTTATTGCAGTCAACTTTTAAATTTCCTCAGAGCCTTGGAATCTTGGGTGGAAAACCAGGTGCTTCGACATACATTATTGGTGTTCAGAATGATAAGGCATTCTACCTTGATCCACATGAAGTTAAGCCGGTTGTTAATATTACTGGGGATACTCAAGAGCCTAATACATCATCATATCACTGCAACATTAGCAGGCATATGCCCCTCGATTCAATTGACCCATCTTTGGCTATTGGGTTTTACTGCCGAGACAAAGATGATTTTGATGATTTTTGTTCCCGAGCAACTAAGCTTGCAGAAGAATCAAACGGTGCACCATTATTCACTGTAGCTCAGTCTAGGAGTCTCCCAATGCAAGTCACAAGTAATTCTGTGTCAGGTGACGACACTAGATTTGAAGAGGATGATTCGCTTAATATGAACCTTGTTAATGATGCAGGCACCAATGAGGATGACTGGCAATTCCTATAA

Protein sequence

>MsG0780039900.01.T01

MVLKDLCDRIVAAKCSSKSSTEIVDNTQVPASSKAGSSDSKFPKASLWSTFFTSGFSVDETYSESSSSEKKTVHSRNSGWAAAVRKVVSGGSMRRFQERVLGSCRTDVSSSDGDIWLLGVCHKISQHESTGDVDTRNVFAAFEQDFFSKILITYRKGFDAIEDSKYTSDVNWGCMLRSSQMLVAQALLFHKLGRSWRKSVDKPVDKEYIDILQLFGDSEAAAFSIHNLLQAGKGYGLAVGSWVGPYAMCRTWEVLARNQREKNEQGEQPLPMAIYVVSGDEDGERGGAPVVCIEDACKRCLEFSRGLVPWTPLLLLVPLVLGLDKVNLRYIPLLQSTFKFPQSLGILGGKPGASTYIIGVQNDKAFYLDPHEVKPVVNITGDTQEPNTSSYHCNISRHMPLDSIDPSLAIGFYCRDKDDFDDFCSRATKLAEESNGAPLFTVAQSRSLPMQVTSNSVSGDDTRFEEDDSLNMNLVNDAGTNEDDWQFL*