Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043524.01.T01 | GAU13626.1 | 76.007 | 571 | 137 | 0 | 1 | 571 | 10 | 580 | 0 | 910 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043524.01.T01 | A0A1J6KGJ9 | 64.148 | 569 | 198 | 3 | 2 | 570 | 14 | 576 | 0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043524.01.T01 | G7L419 | 76.007 | 571 | 136 | 1 | 1 | 571 | 10 | 579 | 0.0 | 908 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0580027191.01 | MsG0880043524.01 | PPI |
| MsG0480020122.01 | MsG0880043524.01 | PPI |
| MsG0880044688.01 | MsG0880043524.01 | PPI |
| MsG0580027033.01 | MsG0880043524.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043524.01.T01 | MTR_7g117110 | 76.007 | 571 | 136 | 1 | 1 | 571 | 10 | 579 | 0.0 | 908 |
| MsG0880043524.01.T01 | MTR_8g027920 | 67.075 | 571 | 183 | 3 | 1 | 571 | 10 | 575 | 0.0 | 805 |
| MsG0880043524.01.T01 | MTR_8g027965 | 66.200 | 571 | 188 | 3 | 1 | 571 | 10 | 575 | 0.0 | 786 |
| MsG0880043524.01.T01 | MTR_8g027955 | 65.849 | 571 | 190 | 3 | 1 | 571 | 17 | 582 | 0.0 | 785 |
| MsG0880043524.01.T01 | MTR_8g027970 | 62.872 | 571 | 207 | 3 | 1 | 571 | 10 | 575 | 0.0 | 766 |
| MsG0880043524.01.T01 | MTR_7g117110 | 73.604 | 394 | 103 | 1 | 1 | 394 | 10 | 402 | 0.0 | 612 |
| MsG0880043524.01.T01 | MTR_8g037720 | 86.916 | 321 | 20 | 1 | 251 | 571 | 137 | 435 | 0.0 | 566 |
| MsG0880043524.01.T01 | MTR_8g037720 | 90.400 | 125 | 12 | 0 | 1 | 125 | 1 | 125 | 1.30e-71 | 236 |
| MsG0880043524.01.T01 | MTR_0102s0060 | 44.234 | 581 | 311 | 5 | 2 | 571 | 19 | 597 | 1.08e-180 | 523 |
| MsG0880043524.01.T01 | MTR_5g016320 | 38.581 | 578 | 341 | 7 | 1 | 570 | 20 | 591 | 1.40e-142 | 425 |
| MsG0880043524.01.T01 | MTR_1g047730 | 78.626 | 262 | 45 | 1 | 310 | 571 | 112 | 362 | 1.96e-142 | 416 |
| MsG0880043524.01.T01 | MTR_1g047730 | 53.548 | 155 | 28 | 2 | 1 | 155 | 1 | 111 | 2.04e-40 | 150 |
| MsG0880043524.01.T01 | MTR_0035s0150 | 39.192 | 569 | 329 | 7 | 3 | 567 | 21 | 576 | 5.61e-139 | 416 |
| MsG0880043524.01.T01 | MTR_8g467000 | 36.207 | 580 | 349 | 5 | 3 | 567 | 16 | 589 | 1.47e-131 | 397 |
| MsG0880043524.01.T01 | MTR_2g081860 | 36.207 | 580 | 352 | 5 | 3 | 567 | 15 | 591 | 1.95e-129 | 392 |
| MsG0880043524.01.T01 | MTR_4g045903 | 36.411 | 574 | 350 | 6 | 3 | 568 | 31 | 597 | 6.43e-129 | 390 |
| MsG0880043524.01.T01 | MTR_1g088765 | 37.790 | 561 | 331 | 9 | 2 | 546 | 11 | 569 | 1.32e-122 | 374 |
| MsG0880043524.01.T01 | MTR_1g088765 | 39.183 | 416 | 237 | 8 | 145 | 546 | 12 | 425 | 4.57e-92 | 290 |
| MsG0880043524.01.T01 | MTR_7g094190 | 33.333 | 567 | 344 | 14 | 2 | 546 | 5 | 559 | 7.77e-91 | 291 |
| MsG0880043524.01.T01 | MTR_7g094190 | 32.979 | 470 | 284 | 13 | 96 | 546 | 2 | 459 | 1.90e-69 | 232 |
| MsG0880043524.01.T01 | MTR_7g094330 | 32.362 | 309 | 171 | 10 | 96 | 400 | 2 | 276 | 3.76e-35 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043524.01.T01 | AT2G46370 | 58.042 | 572 | 232 | 4 | 1 | 570 | 10 | 575 | 0.0 | 694 |
| MsG0880043524.01.T01 | AT2G46370 | 58.042 | 572 | 232 | 4 | 1 | 570 | 10 | 575 | 0.0 | 694 |
| MsG0880043524.01.T01 | AT2G46370 | 58.042 | 572 | 232 | 4 | 1 | 570 | 21 | 586 | 0.0 | 693 |
| MsG0880043524.01.T01 | AT2G46370 | 58.167 | 502 | 204 | 2 | 69 | 570 | 1 | 496 | 0.0 | 623 |
| MsG0880043524.01.T01 | AT4G03400 | 46.088 | 588 | 294 | 7 | 2 | 571 | 9 | 591 | 0.0 | 537 |
| MsG0880043524.01.T01 | AT4G03400 | 46.088 | 588 | 294 | 7 | 2 | 571 | 9 | 591 | 0.0 | 537 |
| MsG0880043524.01.T01 | AT4G37390 | 39.688 | 577 | 335 | 7 | 3 | 570 | 22 | 594 | 1.70e-144 | 430 |
| MsG0880043524.01.T01 | AT2G23170 | 38.783 | 575 | 336 | 6 | 3 | 570 | 21 | 586 | 6.56e-141 | 421 |
| MsG0880043524.01.T01 | AT2G14960 | 38.609 | 575 | 331 | 7 | 3 | 570 | 21 | 580 | 1.78e-138 | 414 |
| MsG0880043524.01.T01 | AT1G59500 | 39.062 | 576 | 334 | 8 | 3 | 570 | 22 | 588 | 7.36e-137 | 410 |
| MsG0880043524.01.T01 | AT4G27260 | 37.435 | 577 | 342 | 5 | 5 | 567 | 25 | 596 | 1.52e-135 | 408 |
| MsG0880043524.01.T01 | AT1G23160 | 38.581 | 578 | 327 | 9 | 5 | 568 | 15 | 578 | 1.02e-134 | 404 |
| MsG0880043524.01.T01 | AT5G54510 | 36.395 | 577 | 348 | 5 | 5 | 567 | 25 | 596 | 6.08e-131 | 396 |
| MsG0880043524.01.T01 | AT5G13320 | 36.934 | 574 | 338 | 7 | 6 | 567 | 13 | 574 | 3.09e-128 | 388 |
| MsG0880043524.01.T01 | AT5G13320 | 36.934 | 574 | 338 | 7 | 6 | 567 | 13 | 574 | 3.09e-128 | 388 |
| MsG0880043524.01.T01 | AT5G13320 | 36.934 | 574 | 338 | 7 | 6 | 567 | 28 | 589 | 6.41e-128 | 387 |
| MsG0880043524.01.T01 | AT5G13350 | 36.538 | 572 | 343 | 10 | 8 | 567 | 17 | 580 | 1.80e-126 | 384 |
| MsG0880043524.01.T01 | AT5G13350 | 36.538 | 572 | 343 | 10 | 8 | 567 | 17 | 580 | 1.80e-126 | 384 |
| MsG0880043524.01.T01 | AT5G13370 | 37.238 | 572 | 339 | 10 | 8 | 567 | 17 | 580 | 2.03e-124 | 379 |
| MsG0880043524.01.T01 | AT5G13360 | 36.731 | 569 | 345 | 8 | 8 | 567 | 17 | 579 | 6.93e-124 | 377 |
| MsG0880043524.01.T01 | AT5G13360 | 36.731 | 569 | 345 | 8 | 8 | 567 | 17 | 579 | 6.93e-124 | 377 |
| MsG0880043524.01.T01 | AT5G13360 | 36.731 | 569 | 345 | 8 | 8 | 567 | 95 | 657 | 5.56e-123 | 377 |
| MsG0880043524.01.T01 | AT1G28130 | 36.210 | 591 | 335 | 11 | 8 | 567 | 17 | 596 | 2.42e-122 | 374 |
| MsG0880043524.01.T01 | AT1G48660 | 34.851 | 571 | 352 | 7 | 5 | 567 | 7 | 565 | 1.49e-121 | 370 |
| MsG0880043524.01.T01 | AT1G48660 | 34.729 | 573 | 353 | 7 | 5 | 567 | 7 | 568 | 2.00e-121 | 370 |
| MsG0880043524.01.T01 | AT5G13380 | 36.380 | 569 | 347 | 8 | 8 | 567 | 47 | 609 | 1.06e-120 | 370 |
| MsG0880043524.01.T01 | AT2G47750 | 37.282 | 574 | 347 | 9 | 2 | 567 | 9 | 577 | 4.22e-120 | 367 |
| MsG0880043524.01.T01 | AT5G51470 | 35.638 | 564 | 339 | 8 | 8 | 561 | 16 | 565 | 3.98e-118 | 362 |
| MsG0880043524.01.T01 | AT1G48670 | 32.925 | 571 | 314 | 11 | 5 | 567 | 8 | 517 | 2.59e-98 | 309 |
| MsG0880043524.01.T01 | AT5G51470 | 34.990 | 483 | 291 | 7 | 89 | 561 | 6 | 475 | 2.09e-95 | 300 |
| MsG0880043524.01.T01 | AT1G48670 | 36.650 | 412 | 243 | 5 | 164 | 567 | 5 | 406 | 1.68e-93 | 293 |
| MsG0880043524.01.T01 | AT1G28130 | 36.044 | 455 | 252 | 9 | 142 | 567 | 9 | 453 | 1.86e-91 | 289 |
| MsG0880043524.01.T01 | AT1G48690 | 32.447 | 188 | 123 | 2 | 5 | 192 | 7 | 190 | 4.41e-24 | 100 |
Find 118 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAATGTGAAGTACATTTA+TGG | 0.099917 | 8:-26149970 | MsG0880043524.01.T01:CDS |
| CCATCACAGCTATGTCTTTA+AGG | 0.137807 | 8:-26150825 | MsG0880043524.01.T01:intron |
| CTATATTGTCATTTATTAAT+TGG | 0.158067 | 8:-26150252 | MsG0880043524.01.T01:CDS |
| TCATTCCATGGTATATATTT+AGG | 0.176340 | 8:+26150665 | None:intergenic |
| TTCTTCTTCTGCTAATAATT+TGG | 0.179943 | 8:+26149354 | None:intergenic |
| TTACAGAATTTAGGTCTTAA+TGG | 0.203345 | 8:-26150964 | MsG0880043524.01.T01:CDS |
| GAATACATTGAAACGAATTT+TGG | 0.203450 | 8:-26151010 | MsG0880043524.01.T01:CDS |
| CTGGAAACTATGTAATATTC+TGG | 0.216453 | 8:-26149285 | MsG0880043524.01.T01:CDS |
| TGCCTCAACTTTCCTAAATA+TGG | 0.256528 | 8:+26149925 | None:intergenic |
| AAGAGCTTTGTGGCGATATA+AGG | 0.265540 | 8:-26150140 | MsG0880043524.01.T01:CDS |
| AGTAATGATCAAGAATCTTT+TGG | 0.266463 | 8:+26149116 | None:intergenic |
| TACATAGTTTCCAGGCTCTT+TGG | 0.268297 | 8:+26149294 | None:intergenic |
| CTTGATCATTACTTGGGATT+AGG | 0.268305 | 8:-26149106 | MsG0880043524.01.T01:CDS |
| AATGTCTAGGGTTGAATAAT+TGG | 0.268432 | 8:-26150017 | MsG0880043524.01.T01:CDS |
| ACACAATATTTACAGAATTT+AGG | 0.291189 | 8:-26150973 | MsG0880043524.01.T01:CDS |
| ACACATGCTTTGATACTTTC+GGG | 0.291616 | 8:+26150931 | None:intergenic |
| GGTTCGATGGAGCCATATTT+AGG | 0.296193 | 8:-26149937 | MsG0880043524.01.T01:CDS |
| TCAATAATTCTATTGATATA+AGG | 0.297555 | 8:+26150880 | None:intergenic |
| AACACATGCTTTGATACTTT+CGG | 0.300523 | 8:+26150930 | None:intergenic |
| TCTAACAACTCGGAGTTCTA+AGG | 0.311747 | 8:+26149150 | None:intergenic |
| ACTTGTTACACACAAAGATT+TGG | 0.315068 | 8:-26150905 | MsG0880043524.01.T01:CDS |
| CCATAAATGTACTTCACATT+AGG | 0.322112 | 8:+26149970 | None:intergenic |
| CAGAATATTACATAGTTTCC+AGG | 0.324343 | 8:+26149286 | None:intergenic |
| TCCTAAACTTCCCCTTGAAT+TGG | 0.325966 | 8:-26149830 | MsG0880043524.01.T01:CDS |
| GCCAATTCAAGGGGAAGTTT+AGG | 0.327603 | 8:+26149829 | None:intergenic |
| TTAGTATTTACCTGCTGAAT+TGG | 0.328063 | 8:+26149660 | None:intergenic |
| ATTATTAGCAGAAGAAGAAT+TGG | 0.334152 | 8:-26149350 | MsG0880043524.01.T01:CDS |
| CCTTTAGTGACTTCTATCTA+TGG | 0.339811 | 8:-26149886 | MsG0880043524.01.T01:CDS |
| TTTCAGGGTTATACCGGTAT+AGG | 0.343416 | 8:-26149516 | MsG0880043524.01.T01:intron |
| GGGGATGTGGTAAATGTTAT+GGG | 0.351976 | 8:-26149490 | MsG0880043524.01.T01:CDS |
| AGGTCAGTACCCTCATTCTT+AGG | 0.353785 | 8:+26149751 | None:intergenic |
| CTCGTAAGGCCAACACTATC+GGG | 0.369483 | 8:-26149174 | MsG0880043524.01.T01:CDS |
| AGGGGATGTGGTAAATGTTA+TGG | 0.370615 | 8:-26149491 | MsG0880043524.01.T01:CDS |
| ATAAATGACAATATAGTGAT+TGG | 0.398118 | 8:+26150259 | None:intergenic |
| TGCAAACAGTTCCAAACAAA+AGG | 0.398590 | 8:-26150405 | MsG0880043524.01.T01:CDS |
| ATGTCGGCTAGTTCTTGATT+TGG | 0.401273 | 8:+26150051 | None:intergenic |
| TGACATAATACCACTTCGTT+TGG | 0.401793 | 8:+26150291 | None:intergenic |
| GTTCAAAAGTTCTGAATGCT+TGG | 0.404196 | 8:+26150172 | None:intergenic |
| TATATCAATAGAATTATTGA+TGG | 0.405605 | 8:-26150877 | MsG0880043524.01.T01:CDS |
| AAGTGTCTACACTTTGGATA+TGG | 0.411713 | 8:-26150429 | MsG0880043524.01.T01:CDS |
| ATGGGCTTTGTAGTTAGAAT+AGG | 0.432841 | 8:+26150844 | None:intergenic |
| GAGTAAATGTTGCAATTGTT+TGG | 0.433207 | 8:-26149230 | MsG0880043524.01.T01:CDS |
| CTACGAATAAAATTGAGTTT+CGG | 0.434239 | 8:+26149451 | None:intergenic |
| AAAGATTCTTGATCATTACT+TGG | 0.435190 | 8:-26149113 | MsG0880043524.01.T01:CDS |
| TGAGTTTCGGAGTTGAGTTA+TGG | 0.437741 | 8:+26149464 | None:intergenic |
| GAACTCCGAGTTGTTAGAAA+AGG | 0.439458 | 8:-26149145 | MsG0880043524.01.T01:CDS |
| TCTCGTAAGGCCAACACTAT+CGG | 0.448126 | 8:-26149175 | MsG0880043524.01.T01:CDS |
| AAACATAGGTTGCCAATTCA+AGG | 0.456379 | 8:+26149818 | None:intergenic |
| TGGAAACTATGTAATATTCT+GGG | 0.464542 | 8:-26149284 | MsG0880043524.01.T01:CDS |
| AGAGCTTTGTGGCGATATAA+GGG | 0.465811 | 8:-26150139 | MsG0880043524.01.T01:CDS |
| CAAAGTTATACAAGAATTTG+AGG | 0.468347 | 8:-26151064 | MsG0880043524.01.T01:CDS |
| GACATAGCCATTCGAATCGA+TGG | 0.468592 | 8:+26150087 | None:intergenic |
| TGCAGTTCTGGCACTACTCA+AGG | 0.469511 | 8:-26150692 | MsG0880043524.01.T01:intron |
| GTAATATTCTGGGAAATTAG+TGG | 0.475779 | 8:-26149274 | MsG0880043524.01.T01:CDS |
| TGTGTAAGACCTACATATCT+TGG | 0.476146 | 8:+26149058 | None:intergenic |
| ATTGAGCACAAATGCAGAAA+AGG | 0.476705 | 8:-26151040 | MsG0880043524.01.T01:CDS |
| ATATAATTTCAGGGTTATAC+CGG | 0.478271 | 8:-26149522 | MsG0880043524.01.T01:intron |
| CCGGTATAGGCTAGGGGATG+TGG | 0.478589 | 8:-26149503 | MsG0880043524.01.T01:CDS |
| GCAAACAGTTCCAAACAAAA+GGG | 0.483570 | 8:-26150404 | MsG0880043524.01.T01:CDS |
| GGTTATACCGGTATAGGCTA+GGG | 0.491142 | 8:-26149510 | MsG0880043524.01.T01:CDS |
| AATGTTGCAATTGTTTGGAT+AGG | 0.491719 | 8:-26149225 | MsG0880043524.01.T01:CDS |
| GGGTTATACCGGTATAGGCT+AGG | 0.495810 | 8:-26149511 | MsG0880043524.01.T01:CDS |
| CTAGGGTTGAATAATTGGTA+TGG | 0.496633 | 8:-26150012 | MsG0880043524.01.T01:CDS |
| TCTATCTATGGAGCTTCTGA+AGG | 0.498334 | 8:-26149874 | MsG0880043524.01.T01:CDS |
| AAGATTCTTGATCATTACTT+GGG | 0.502906 | 8:-26149112 | MsG0880043524.01.T01:CDS |
| TACATTTATGGAATCATGAC+GGG | 0.503811 | 8:-26149958 | MsG0880043524.01.T01:CDS |
| CCTTAAAGACATAGCTGTGA+TGG | 0.504575 | 8:+26150825 | None:intergenic |
| AATGGGAAGTGTCTACACTT+TGG | 0.505062 | 8:-26150435 | MsG0880043524.01.T01:CDS |
| GTTGATTTATCCAAAGAGCC+TGG | 0.507524 | 8:-26149304 | MsG0880043524.01.T01:CDS |
| TTCTGAATGCTTGGACTATG+AGG | 0.519678 | 8:+26150181 | None:intergenic |
| TTCACCTCAGTGAGTCCCAC+TGG | 0.521414 | 8:+26149712 | None:intergenic |
| CAAGTTTGGGAAGAGCTTTG+TGG | 0.522028 | 8:-26150150 | MsG0880043524.01.T01:CDS |
| AAATCTTTGTGTGTAACAAG+TGG | 0.522472 | 8:+26150907 | None:intergenic |
| TCTCACACATCCTAAGAATG+AGG | 0.531137 | 8:-26149761 | MsG0880043524.01.T01:CDS |
| GAAAGATTTACTGTTAGTTG+TGG | 0.532905 | 8:-26149386 | MsG0880043524.01.T01:CDS |
| TGGAATCATGACGGGTTCGA+TGG | 0.533961 | 8:-26149950 | MsG0880043524.01.T01:CDS |
| AACATAGGTTGCCAATTCAA+GGG | 0.534306 | 8:+26149819 | None:intergenic |
| TATAAGACACCAAGATATGT+AGG | 0.535153 | 8:-26149067 | MsG0880043524.01.T01:CDS |
| GGAAAGTTGAGGCATTATGC+AGG | 0.539668 | 8:-26149916 | MsG0880043524.01.T01:CDS |
| TCAAACAGTTCATCATTCCA+TGG | 0.540156 | 8:+26150653 | None:intergenic |
| CCACATCCCCTAGCCTATAC+CGG | 0.540960 | 8:+26149503 | None:intergenic |
| ATTCGAATTGCGTAACATGT+TGG | 0.541218 | 8:+26150356 | None:intergenic |
| ATTGTTATGACCAATTCAGC+AGG | 0.541922 | 8:-26149670 | MsG0880043524.01.T01:intron |
| CAAATGCAGAAAAGGTTCAA+AGG | 0.548100 | 8:-26151032 | MsG0880043524.01.T01:CDS |
| AACAGCAGTGCAGATACATC+AGG | 0.557138 | 8:-26150630 | MsG0880043524.01.T01:CDS |
| TTGTTCGTGTTGTTGTTGAA+GGG | 0.560311 | 8:-26151118 | MsG0880043524.01.T01:intron |
| TGTGTTGATCATCATCCAGT+GGG | 0.560890 | 8:-26149727 | MsG0880043524.01.T01:CDS |
| ATATCAATGAAGAATGAAGA+TGG | 0.564260 | 8:+26151163 | None:intergenic |
| CCATAGATAGAAGTCACTAA+AGG | 0.569688 | 8:+26149886 | None:intergenic |
| TTCTAAGGCCCCGATAGTGT+TGG | 0.590615 | 8:+26149165 | None:intergenic |
| AGTGGGACTCACTGAGGTGA+AGG | 0.591383 | 8:-26149710 | MsG0880043524.01.T01:CDS |
| GTACATTTATGGAATCATGA+CGG | 0.592522 | 8:-26149959 | MsG0880043524.01.T01:CDS |
| CTTAAAGACATAGCTGTGAT+GGG | 0.596370 | 8:+26150826 | None:intergenic |
| GGAAGCCTAAATATATACCA+TGG | 0.599873 | 8:-26150670 | MsG0880043524.01.T01:CDS |
| AAGTATGAATGCTGATGTTG+AGG | 0.601293 | 8:+26151188 | None:intergenic |
| CTATCTATGGAGCTTCTGAA+GGG | 0.603586 | 8:-26149873 | MsG0880043524.01.T01:CDS |
| GCAGTTCTGGCACTACTCAA+GGG | 0.610736 | 8:-26150691 | MsG0880043524.01.T01:intron |
| TTGTGTTGATCATCATCCAG+TGG | 0.611754 | 8:-26149728 | MsG0880043524.01.T01:CDS |
| CTCACACATCCTAAGAATGA+GGG | 0.616309 | 8:-26149760 | MsG0880043524.01.T01:CDS |
| CACAGATCCATCGATTCGAA+TGG | 0.616799 | 8:-26150094 | MsG0880043524.01.T01:CDS |
| AGCCATATTTAGGAAAGTTG+AGG | 0.628396 | 8:-26149927 | MsG0880043524.01.T01:CDS |
| ACATAGGTTGCCAATTCAAG+GGG | 0.631559 | 8:+26149820 | None:intergenic |
| TTCACATTAGGAAACAACTC+TGG | 0.636086 | 8:+26149982 | None:intergenic |
| CTTTGTGGCGATATAAGGGA+AGG | 0.644231 | 8:-26150135 | MsG0880043524.01.T01:CDS |
| GGACTCACTGAGGTGAAGGT+TGG | 0.652175 | 8:-26149706 | MsG0880043524.01.T01:CDS |
| CAAACAGTTCCAAACAAAAG+GGG | 0.656453 | 8:-26150403 | MsG0880043524.01.T01:CDS |
| TCGTAAGGCCAACACTATCG+GGG | 0.656675 | 8:-26149173 | MsG0880043524.01.T01:CDS |
| ATATTGCACTCCAAACGAAG+TGG | 0.661883 | 8:-26150301 | MsG0880043524.01.T01:CDS |
| TCATTCTTAGGATGTGTGAG+AGG | 0.664622 | 8:+26149763 | None:intergenic |
| TAACAGTAAATCTTTCTCTG+TGG | 0.665610 | 8:+26149393 | None:intergenic |
| AAACAGTTCCAAACAAAAGG+GGG | 0.686034 | 8:-26150402 | MsG0880043524.01.T01:CDS |
| GTTATACCGGTATAGGCTAG+GGG | 0.691739 | 8:-26149509 | MsG0880043524.01.T01:CDS |
| TCATCCAGTGGGACTCACTG+AGG | 0.711966 | 8:-26149716 | MsG0880043524.01.T01:CDS |
| CTGGATGATGATCAACACAA+AGG | 0.724106 | 8:+26149731 | None:intergenic |
| CACGAACAAAGTGACTAGAG+TGG | 0.727375 | 8:+26151132 | None:intergenic |
| GCTCTTTGGATAAATCAACA+TGG | 0.730284 | 8:+26149308 | None:intergenic |
| AATTGGACTGCTTTACCGCG+AGG | 0.738759 | 8:-26150235 | MsG0880043524.01.T01:CDS |
| ACAAAGACTGAACTTCCTCG+CGG | 0.751306 | 8:+26150220 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATTATATATAAAAAA+TGG | - | Chr8:26149049-26149068 | MsG0880043524.01.T01:CDS | 0.0% |
| !! | ATTTATCATATTAACTTACT+CGG | - | Chr8:26150590-26150609 | MsG0880043524.01.T01:intron | 15.0% |
| !! | TATATCAATAGAATTATTGA+TGG | - | Chr8:26149260-26149279 | MsG0880043524.01.T01:CDS | 15.0% |
| !! | TCAATAATTCTATTGATATA+AGG | + | Chr8:26149260-26149279 | None:intergenic | 15.0% |
| !!! | CTATATTGTCATTTATTAAT+TGG | - | Chr8:26149885-26149904 | MsG0880043524.01.T01:CDS | 15.0% |
| !! | AAAAGCAAACTAAATAAACA+TGG | + | Chr8:26150510-26150529 | None:intergenic | 20.0% |
| !! | AATTAACCAACAAAAAATCA+TGG | + | Chr8:26149620-26149639 | None:intergenic | 20.0% |
| !! | ACACAATATTTACAGAATTT+AGG | - | Chr8:26149164-26149183 | MsG0880043524.01.T01:CDS | 20.0% |
| !! | ATAAATGACAATATAGTGAT+TGG | + | Chr8:26149881-26149900 | None:intergenic | 20.0% |
| !!! | ATGTTTATTTAGTTTGCTTT+TGG | - | Chr8:26150509-26150528 | MsG0880043524.01.T01:intron | 20.0% |
| !!! | TTTTGTTGGTTAATTAAAGT+TGG | - | Chr8:26149625-26149644 | MsG0880043524.01.T01:intron | 20.0% |
| ! | AAAGATTCTTGATCATTACT+TGG | - | Chr8:26151024-26151043 | MsG0880043524.01.T01:CDS | 25.0% |
| ! | AAGATTCTTGATCATTACTT+GGG | - | Chr8:26151025-26151044 | MsG0880043524.01.T01:CDS | 25.0% |
| ! | AGTTTCCAATGCTAAAAAAT+GGG | - | Chr8:26149685-26149704 | MsG0880043524.01.T01:CDS | 25.0% |
| ! | ATAATCCACAAAAAATGTCT+AGG | - | Chr8:26150107-26150126 | MsG0880043524.01.T01:CDS | 25.0% |
| ! | ATATAATTTCAGGGTTATAC+CGG | - | Chr8:26150615-26150634 | MsG0880043524.01.T01:CDS | 25.0% |
| ! | ATATCAATGAAGAATGAAGA+TGG | + | Chr8:26148977-26148996 | None:intergenic | 25.0% |
| ! | ATTATTAGCAGAAGAAGAAT+TGG | - | Chr8:26150787-26150806 | MsG0880043524.01.T01:intron | 25.0% |
| ! | CAAAGTTATACAAGAATTTG+AGG | - | Chr8:26149073-26149092 | MsG0880043524.01.T01:CDS | 25.0% |
| ! | CTACGAATAAAATTGAGTTT+CGG | + | Chr8:26150689-26150708 | None:intergenic | 25.0% |
| ! | TAATCCACAAAAAATGTCTA+GGG | - | Chr8:26150108-26150127 | MsG0880043524.01.T01:CDS | 25.0% |
| ! | TACTCGGTTATATAATTTCA+GGG | - | Chr8:26150606-26150625 | MsG0880043524.01.T01:intron | 25.0% |
| ! | TCATTCCATGGTATATATTT+AGG | + | Chr8:26149475-26149494 | None:intergenic | 25.0% |
| ! | TGGAAACTATGTAATATTCT+GGG | - | Chr8:26150853-26150872 | MsG0880043524.01.T01:CDS | 25.0% |
| ! | TTACAGAATTTAGGTCTTAA+TGG | - | Chr8:26149173-26149192 | MsG0880043524.01.T01:CDS | 25.0% |
| ! | TTACTCGGTTATATAATTTC+AGG | - | Chr8:26150605-26150624 | MsG0880043524.01.T01:intron | 25.0% |
| ! | TTCTTCTTCTGCTAATAATT+TGG | + | Chr8:26150786-26150805 | None:intergenic | 25.0% |
| !! | ACCTTTATGTTAATGTGTTT+TGG | - | Chr8:26150541-26150560 | MsG0880043524.01.T01:intron | 25.0% |
| !! | AGTAATGATCAAGAATCTTT+TGG | + | Chr8:26151024-26151043 | None:intergenic | 25.0% |
| !! | CCTTTATGTTAATGTGTTTT+GGG | - | Chr8:26150542-26150561 | MsG0880043524.01.T01:intron | 25.0% |
| !! | GAATACATTGAAACGAATTT+TGG | - | Chr8:26149127-26149146 | MsG0880043524.01.T01:CDS | 25.0% |
| !!! | ACATTTTTTGTGGATTATGT+CGG | + | Chr8:26150105-26150124 | None:intergenic | 25.0% |
| !!! | ATTTTGAGGAAACAAAACAT+AGG | + | Chr8:26150336-26150355 | None:intergenic | 25.0% |
| !!! | TATGTTTTGTTTCCTCAAAA+TGG | - | Chr8:26150335-26150354 | MsG0880043524.01.T01:CDS | 25.0% |
| AAATCTTTGTGTGTAACAAG+TGG | + | Chr8:26149233-26149252 | None:intergenic | 30.0% | |
| AACACATGCTTTGATACTTT+CGG | + | Chr8:26149210-26149229 | None:intergenic | 30.0% | |
| AACCAACAAAAAATCATGGT+AGG | + | Chr8:26149616-26149635 | None:intergenic | 30.0% | |
| AATGTTGCAATTGTTTGGAT+AGG | - | Chr8:26150912-26150931 | MsG0880043524.01.T01:CDS | 30.0% | |
| ATTGGAAACTCTCTACAAAA+TGG | + | Chr8:26149675-26149694 | None:intergenic | 30.0% | |
| CAGAATATTACATAGTTTCC+AGG | + | Chr8:26150854-26150873 | None:intergenic | 30.0% | |
| CCATAAATGTACTTCACATT+AGG | + | Chr8:26150170-26150189 | None:intergenic | 30.0% | |
| CCCAAAACACATTAACATAA+AGG | + | Chr8:26150545-26150564 | None:intergenic | 30.0% | |
| CCTAATGTGAAGTACATTTA+TGG | - | Chr8:26150167-26150186 | MsG0880043524.01.T01:CDS | 30.0% | |
| CCTGTTTAGATATGCAAAAA+AGG | + | Chr8:26149533-26149552 | None:intergenic | 30.0% | |
| CTGGAAACTATGTAATATTC+TGG | - | Chr8:26150852-26150871 | MsG0880043524.01.T01:CDS | 30.0% | |
| GAAAGATTTACTGTTAGTTG+TGG | - | Chr8:26150751-26150770 | MsG0880043524.01.T01:intron | 30.0% | |
| GAGTAAATGTTGCAATTGTT+TGG | - | Chr8:26150907-26150926 | MsG0880043524.01.T01:CDS | 30.0% | |
| GAGTTTCCAATGCTAAAAAA+TGG | - | Chr8:26149684-26149703 | MsG0880043524.01.T01:CDS | 30.0% | |
| GTACATTTATGGAATCATGA+CGG | - | Chr8:26150178-26150197 | MsG0880043524.01.T01:CDS | 30.0% | |
| TAACAGTAAATCTTTCTCTG+TGG | + | Chr8:26150747-26150766 | None:intergenic | 30.0% | |
| TACATTTATGGAATCATGAC+GGG | - | Chr8:26150179-26150198 | MsG0880043524.01.T01:CDS | 30.0% | |
| TATAAGACACCAAGATATGT+AGG | - | Chr8:26151070-26151089 | MsG0880043524.01.T01:CDS | 30.0% | |
| TTACGAGAAAAATTGTAGGA+TGG | + | Chr8:26150950-26150969 | None:intergenic | 30.0% | |
| TTAGTATTTACCTGCTGAAT+TGG | + | Chr8:26150480-26150499 | None:intergenic | 30.0% | |
| ! | AATGTCTAGGGTTGAATAAT+TGG | - | Chr8:26150120-26150139 | MsG0880043524.01.T01:CDS | 30.0% |
| ! | ACTTGTTACACACAAAGATT+TGG | - | Chr8:26149232-26149251 | MsG0880043524.01.T01:CDS | 30.0% |
| ! | ATCCTACAATTTTTCTCGTA+AGG | - | Chr8:26150949-26150968 | MsG0880043524.01.T01:CDS | 30.0% |
| ! | ATGATCAAGAATCTTTTGGA+AGG | + | Chr8:26151020-26151039 | None:intergenic | 30.0% |
| ! | CAGAACTTTTGAACAAGTTT+GGG | - | Chr8:26149974-26149993 | MsG0880043524.01.T01:CDS | 30.0% |
| ! | CGAAACTCAATTTTATTCGT+AGG | - | Chr8:26150687-26150706 | MsG0880043524.01.T01:CDS | 30.0% |
| ! | GTAATATTCTGGGAAATTAG+TGG | - | Chr8:26150863-26150882 | MsG0880043524.01.T01:CDS | 30.0% |
| ! | TCAGAACTTTTGAACAAGTT+TGG | - | Chr8:26149973-26149992 | MsG0880043524.01.T01:CDS | 30.0% |
| !! | AACTCAAAGTATCCATTTTG+AGG | + | Chr8:26150350-26150369 | None:intergenic | 30.0% |
| !!! | CCTTTTTTGCATATCTAAAC+AGG | - | Chr8:26149530-26149549 | MsG0880043524.01.T01:intron | 30.0% |
| AAACAGTTCCAAACAAAAGG+GGG | - | Chr8:26149735-26149754 | MsG0880043524.01.T01:CDS | 35.0% | |
| AAACATAGGTTGCCAATTCA+AGG | + | Chr8:26150322-26150341 | None:intergenic | 35.0% | |
| AACATAGGTTGCCAATTCAA+GGG | + | Chr8:26150321-26150340 | None:intergenic | 35.0% | |
| AAGTATGAATGCTGATGTTG+AGG | + | Chr8:26148952-26148971 | None:intergenic | 35.0% | |
| AAGTGTCTACACTTTGGATA+TGG | - | Chr8:26149708-26149727 | MsG0880043524.01.T01:CDS | 35.0% | |
| ACACATGCTTTGATACTTTC+GGG | + | Chr8:26149209-26149228 | None:intergenic | 35.0% | |
| AGCCATATTTAGGAAAGTTG+AGG | - | Chr8:26150210-26150229 | MsG0880043524.01.T01:CDS | 35.0% | |
| ATTCGAATTGCGTAACATGT+TGG | + | Chr8:26149784-26149803 | None:intergenic | 35.0% | |
| ATTGAGCACAAATGCAGAAA+AGG | - | Chr8:26149097-26149116 | MsG0880043524.01.T01:CDS | 35.0% | |
| ATTGTTATGACCAATTCAGC+AGG | - | Chr8:26150467-26150486 | MsG0880043524.01.T01:intron | 35.0% | |
| CAAACAGTTCCAAACAAAAG+GGG | - | Chr8:26149734-26149753 | MsG0880043524.01.T01:CDS | 35.0% | |
| CAAATGCAGAAAAGGTTCAA+AGG | - | Chr8:26149105-26149124 | MsG0880043524.01.T01:CDS | 35.0% | |
| CCATAGATAGAAGTCACTAA+AGG | + | Chr8:26150254-26150273 | None:intergenic | 35.0% | |
| CCTTTAGTGACTTCTATCTA+TGG | - | Chr8:26150251-26150270 | MsG0880043524.01.T01:CDS | 35.0% | |
| CTAGGGTTGAATAATTGGTA+TGG | - | Chr8:26150125-26150144 | MsG0880043524.01.T01:CDS | 35.0% | |
| CTTAAAGACATAGCTGTGAT+GGG | + | Chr8:26149314-26149333 | None:intergenic | 35.0% | |
| CTTGATCATTACTTGGGATT+AGG | - | Chr8:26151031-26151050 | MsG0880043524.01.T01:CDS | 35.0% | |
| GCAAACAGTTCCAAACAAAA+GGG | - | Chr8:26149733-26149752 | MsG0880043524.01.T01:CDS | 35.0% | |
| GCTCTTTGGATAAATCAACA+TGG | + | Chr8:26150832-26150851 | None:intergenic | 35.0% | |
| GGAAGCCTAAATATATACCA+TGG | - | Chr8:26149467-26149486 | MsG0880043524.01.T01:CDS | 35.0% | |
| TCAAACAGTTCATCATTCCA+TGG | + | Chr8:26149487-26149506 | None:intergenic | 35.0% | |
| TGACATAATACCACTTCGTT+TGG | + | Chr8:26149849-26149868 | None:intergenic | 35.0% | |
| TGCAAACAGTTCCAAACAAA+AGG | - | Chr8:26149732-26149751 | MsG0880043524.01.T01:CDS | 35.0% | |
| TGCCTCAACTTTCCTAAATA+TGG | + | Chr8:26150215-26150234 | None:intergenic | 35.0% | |
| TGTGTAAGACCTACATATCT+TGG | + | Chr8:26151082-26151101 | None:intergenic | 35.0% | |
| TTCACATTAGGAAACAACTC+TGG | + | Chr8:26150158-26150177 | None:intergenic | 35.0% | |
| ! | AGGTTCCTTTTCTAACAACT+CGG | + | Chr8:26151000-26151019 | None:intergenic | 35.0% |
| ! | ATGGGCTTTGTAGTTAGAAT+AGG | + | Chr8:26149296-26149315 | None:intergenic | 35.0% |
| ! | TTGTTCGTGTTGTTGTTGAA+GGG | - | Chr8:26149019-26149038 | MsG0880043524.01.T01:CDS | 35.0% |
| ! | TTTGTTCGTGTTGTTGTTGA+AGG | - | Chr8:26149018-26149037 | MsG0880043524.01.T01:CDS | 35.0% |
| !! | GTTCAAAAGTTCTGAATGCT+TGG | + | Chr8:26149968-26149987 | None:intergenic | 35.0% |
| !!! | CACTTCCCATTTTTTAGCAT+TGG | + | Chr8:26149693-26149712 | None:intergenic | 35.0% |
| !!! | GTCCTACCATGATTTTTTGT+TGG | - | Chr8:26149611-26149630 | MsG0880043524.01.T01:intron | 35.0% |
| !!! | TCAACCCTAGACATTTTTTG+TGG | + | Chr8:26150115-26150134 | None:intergenic | 35.0% |
| ACATAGGTTGCCAATTCAAG+GGG | + | Chr8:26150320-26150339 | None:intergenic | 40.0% | |
| AGGGGATGTGGTAAATGTTA+TGG | - | Chr8:26150646-26150665 | MsG0880043524.01.T01:CDS | 40.0% | |
| ATATTGCACTCCAAACGAAG+TGG | - | Chr8:26149836-26149855 | MsG0880043524.01.T01:CDS | 40.0% | |
| CCATCACAGCTATGTCTTTA+AGG | - | Chr8:26149312-26149331 | MsG0880043524.01.T01:CDS | 40.0% | |
| CCTTAAAGACATAGCTGTGA+TGG | + | Chr8:26149315-26149334 | None:intergenic | 40.0% | |
| CTATCTATGGAGCTTCTGAA+GGG | - | Chr8:26150264-26150283 | MsG0880043524.01.T01:CDS | 40.0% | |
| CTCACACATCCTAAGAATGA+GGG | - | Chr8:26150377-26150396 | MsG0880043524.01.T01:CDS | 40.0% | |
| CTGGATGATGATCAACACAA+AGG | + | Chr8:26150409-26150428 | None:intergenic | 40.0% | |
| GAACTCCGAGTTGTTAGAAA+AGG | - | Chr8:26150992-26151011 | MsG0880043524.01.T01:CDS | 40.0% | |
| GGCCTTACGAGAAAAATTGT+AGG | + | Chr8:26150954-26150973 | None:intergenic | 40.0% | |
| GGGGATGTGGTAAATGTTAT+GGG | - | Chr8:26150647-26150666 | MsG0880043524.01.T01:CDS | 40.0% | |
| TACATAGTTTCCAGGCTCTT+TGG | + | Chr8:26150846-26150865 | None:intergenic | 40.0% | |
| TCATTCTTAGGATGTGTGAG+AGG | + | Chr8:26150377-26150396 | None:intergenic | 40.0% | |
| TCCTAAACTTCCCCTTGAAT+TGG | - | Chr8:26150307-26150326 | MsG0880043524.01.T01:CDS | 40.0% | |
| TCTAACAACTCGGAGTTCTA+AGG | + | Chr8:26150990-26151009 | None:intergenic | 40.0% | |
| TCTATCTATGGAGCTTCTGA+AGG | - | Chr8:26150263-26150282 | MsG0880043524.01.T01:CDS | 40.0% | |
| TCTCACACATCCTAAGAATG+AGG | - | Chr8:26150376-26150395 | MsG0880043524.01.T01:CDS | 40.0% | |
| TGAGTTTCGGAGTTGAGTTA+TGG | + | Chr8:26150676-26150695 | None:intergenic | 40.0% | |
| TTCTGAATGCTTGGACTATG+AGG | + | Chr8:26149959-26149978 | None:intergenic | 40.0% | |
| TTTCAGGGTTATACCGGTAT+AGG | - | Chr8:26150621-26150640 | MsG0880043524.01.T01:CDS | 40.0% | |
| ! | AAGAGCTTTGTGGCGATATA+AGG | - | Chr8:26149997-26150016 | MsG0880043524.01.T01:CDS | 40.0% |
| ! | AGAGCTTTGTGGCGATATAA+GGG | - | Chr8:26149998-26150017 | MsG0880043524.01.T01:CDS | 40.0% |
| ! | ATGTCGGCTAGTTCTTGATT+TGG | + | Chr8:26150089-26150108 | None:intergenic | 40.0% |
| ! | CAAGAGCATGGTTTGTAGTT+CGG | + | Chr8:26149427-26149446 | None:intergenic | 40.0% |
| ! | GTTGATTTATCCAAAGAGCC+TGG | - | Chr8:26150833-26150852 | MsG0880043524.01.T01:CDS | 40.0% |
| ! | TGTGTTGATCATCATCCAGT+GGG | - | Chr8:26150410-26150429 | MsG0880043524.01.T01:CDS | 40.0% |
| ! | TTGTGTTGATCATCATCCAG+TGG | - | Chr8:26150409-26150428 | MsG0880043524.01.T01:CDS | 40.0% |
| !! | AATGGGAAGTGTCTACACTT+TGG | - | Chr8:26149702-26149721 | MsG0880043524.01.T01:CDS | 40.0% |
| AAACCATGCTCTTGCAGTTC+TGG | - | Chr8:26149433-26149452 | MsG0880043524.01.T01:CDS | 45.0% | |
| AACAGCAGTGCAGATACATC+AGG | - | Chr8:26149507-26149526 | MsG0880043524.01.T01:CDS | 45.0% | |
| ACAAAGACTGAACTTCCTCG+CGG | + | Chr8:26149920-26149939 | None:intergenic | 45.0% | |
| AGGTCAGTACCCTCATTCTT+AGG | + | Chr8:26150389-26150408 | None:intergenic | 45.0% | |
| CAAGTTTGGGAAGAGCTTTG+TGG | - | Chr8:26149987-26150006 | MsG0880043524.01.T01:CDS | 45.0% | |
| CACGAACAAAGTGACTAGAG+TGG | + | Chr8:26149008-26149027 | None:intergenic | 45.0% | |
| CTTTGTGGCGATATAAGGGA+AGG | - | Chr8:26150002-26150021 | MsG0880043524.01.T01:CDS | 45.0% | |
| GACATAGCCATTCGAATCGA+TGG | + | Chr8:26150053-26150072 | None:intergenic | 45.0% | |
| GCCAATTCAAGGGGAAGTTT+AGG | + | Chr8:26150311-26150330 | None:intergenic | 45.0% | |
| GGTTATACCGGTATAGGCTA+GGG | - | Chr8:26150627-26150646 | MsG0880043524.01.T01:CDS | 45.0% | |
| GGTTCGATGGAGCCATATTT+AGG | - | Chr8:26150200-26150219 | MsG0880043524.01.T01:CDS | 45.0% | |
| GTTATACCGGTATAGGCTAG+GGG | - | Chr8:26150628-26150647 | MsG0880043524.01.T01:CDS | 45.0% | |
| TCTCGTAAGGCCAACACTAT+CGG | - | Chr8:26150962-26150981 | MsG0880043524.01.T01:CDS | 45.0% | |
| ! | CTATGAGACCCCCTTTTGTT+TGG | + | Chr8:26149746-26149765 | None:intergenic | 45.0% |
| ! | GGAAAGTTGAGGCATTATGC+AGG | - | Chr8:26150221-26150240 | MsG0880043524.01.T01:CDS | 45.0% |
| !! | CACAGATCCATCGATTCGAA+TGG | - | Chr8:26150043-26150062 | MsG0880043524.01.T01:CDS | 45.0% |
| !! | TTCATTTATTAATAAAATTA+TGG | - | Chr8:26149558-26149577 | MsG0880043524.01.T01:intron | 5.0% |
| AATTGGACTGCTTTACCGCG+AGG | - | Chr8:26149902-26149921 | MsG0880043524.01.T01:CDS | 50.0% | |
| CTCGTAAGGCCAACACTATC+GGG | - | Chr8:26150963-26150982 | MsG0880043524.01.T01:CDS | 50.0% | |
| GGGTTATACCGGTATAGGCT+AGG | - | Chr8:26150626-26150645 | MsG0880043524.01.T01:CDS | 50.0% | |
| TCGTAAGGCCAACACTATCG+GGG | - | Chr8:26150964-26150983 | MsG0880043524.01.T01:CDS | 50.0% | |
| ! | GCAGTTCTGGCACTACTCAA+GGG | - | Chr8:26149446-26149465 | MsG0880043524.01.T01:CDS | 50.0% |
| ! | TGCAGTTCTGGCACTACTCA+AGG | - | Chr8:26149445-26149464 | MsG0880043524.01.T01:CDS | 50.0% |
| !! | TGGAATCATGACGGGTTCGA+TGG | - | Chr8:26150187-26150206 | MsG0880043524.01.T01:CDS | 50.0% |
| !! | TTCTAAGGCCCCGATAGTGT+TGG | + | Chr8:26150975-26150994 | None:intergenic | 50.0% |
| AGTGGGACTCACTGAGGTGA+AGG | - | Chr8:26150427-26150446 | MsG0880043524.01.T01:CDS | 55.0% | |
| CCACATCCCCTAGCCTATAC+CGG | + | Chr8:26150637-26150656 | None:intergenic | 55.0% | |
| GGACTCACTGAGGTGAAGGT+TGG | - | Chr8:26150431-26150450 | MsG0880043524.01.T01:CDS | 55.0% | |
| GTGCCAGAACTGCAAGAGCA+TGG | + | Chr8:26149439-26149458 | None:intergenic | 55.0% | |
| TCATCCAGTGGGACTCACTG+AGG | - | Chr8:26150421-26150440 | MsG0880043524.01.T01:CDS | 55.0% | |
| TTCACCTCAGTGAGTCCCAC+TGG | + | Chr8:26150428-26150447 | None:intergenic | 55.0% | |
| CCGGTATAGGCTAGGGGATG+TGG | - | Chr8:26150634-26150653 | MsG0880043524.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 26148927 | 26151232 | 26148927 | ID=MsG0880043524.01;Name=MsG0880043524.01 |
| Chr8 | mRNA | 26148927 | 26151232 | 26148927 | ID=MsG0880043524.01.T01;Parent=MsG0880043524.01;Name=MsG0880043524.01.T01;_AED=0.48;_eAED=0.48;_QI=120|1|1|1|0.75|0.6|5|64|571 |
| Chr8 | exon | 26148927 | 26149532 | 26148927 | ID=MsG0880043524.01.T01:exon:5206;Parent=MsG0880043524.01.T01 |
| Chr8 | exon | 26149671 | 26150476 | 26149671 | ID=MsG0880043524.01.T01:exon:5205;Parent=MsG0880043524.01.T01 |
| Chr8 | exon | 26150608 | 26150709 | 26150608 | ID=MsG0880043524.01.T01:exon:5204;Parent=MsG0880043524.01.T01 |
| Chr8 | exon | 26150826 | 26151125 | 26150826 | ID=MsG0880043524.01.T01:exon:5203;Parent=MsG0880043524.01.T01 |
| Chr8 | exon | 26151147 | 26151232 | 26151147 | ID=MsG0880043524.01.T01:exon:5202;Parent=MsG0880043524.01.T01 |
| Chr8 | five_prime_UTR | 26151147 | 26151232 | 26151147 | ID=MsG0880043524.01.T01:five_prime_utr;Parent=MsG0880043524.01.T01 |
| Chr8 | five_prime_UTR | 26151092 | 26151125 | 26151092 | ID=MsG0880043524.01.T01:five_prime_utr;Parent=MsG0880043524.01.T01 |
| Chr8 | CDS | 26150826 | 26151091 | 26150826 | ID=MsG0880043524.01.T01:cds;Parent=MsG0880043524.01.T01 |
| Chr8 | CDS | 26150608 | 26150709 | 26150608 | ID=MsG0880043524.01.T01:cds;Parent=MsG0880043524.01.T01 |
| Chr8 | CDS | 26149671 | 26150476 | 26149671 | ID=MsG0880043524.01.T01:cds;Parent=MsG0880043524.01.T01 |
| Chr8 | CDS | 26148991 | 26149532 | 26148991 | ID=MsG0880043524.01.T01:cds;Parent=MsG0880043524.01.T01 |
| Chr8 | three_prime_UTR | 26148927 | 26148990 | 26148927 | ID=MsG0880043524.01.T01:three_prime_utr;Parent=MsG0880043524.01.T01 |
| Gene Sequence |
| Protein sequence |
