Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027033.01.T01 | XP_013443163.1 | 98.299 | 588 | 10 | 0 | 1 | 588 | 1 | 588 | 0 | 1205 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027033.01.T01 | O82333 | 82.403 | 591 | 99 | 3 | 1 | 588 | 1 | 589 | 0 | 1014 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027033.01.T01 | A0A072TJY1 | 98.299 | 588 | 10 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1205 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0580027033.01 | MsG0580027191.01 | 0.892102 | 2.162612e-74 | 1.948063e-70 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780041738.01 | MsG0580027033.01 | PPI |
| MsG0880043046.01 | MsG0580027033.01 | PPI |
| MsG0880044688.01 | MsG0580027033.01 | PPI |
| MsG0580027033.01 | MsG0880043524.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027033.01.T01 | MTR_0035s0150 | 98.299 | 588 | 10 | 0 | 1 | 588 | 1 | 588 | 0.0 | 1205 |
| MsG0580027033.01.T01 | MTR_5g016320 | 77.409 | 602 | 120 | 4 | 1 | 588 | 1 | 600 | 0.0 | 956 |
| MsG0580027033.01.T01 | MTR_8g467000 | 64.141 | 594 | 195 | 2 | 9 | 584 | 4 | 597 | 0.0 | 810 |
| MsG0580027033.01.T01 | MTR_4g045903 | 62.436 | 583 | 199 | 5 | 17 | 584 | 27 | 604 | 0.0 | 759 |
| MsG0580027033.01.T01 | MTR_2g081860 | 61.224 | 588 | 207 | 3 | 18 | 584 | 12 | 599 | 0.0 | 759 |
| MsG0580027033.01.T01 | MTR_1g088765 | 52.951 | 593 | 248 | 7 | 18 | 584 | 9 | 596 | 0.0 | 622 |
| MsG0580027033.01.T01 | MTR_1g088765 | 53.319 | 452 | 192 | 5 | 152 | 584 | 1 | 452 | 1.71e-166 | 482 |
| MsG0580027033.01.T01 | MTR_7g117110 | 39.367 | 569 | 327 | 8 | 21 | 576 | 12 | 575 | 1.88e-137 | 412 |
| MsG0580027033.01.T01 | MTR_8g027970 | 38.761 | 565 | 332 | 7 | 21 | 576 | 12 | 571 | 1.69e-135 | 407 |
| MsG0580027033.01.T01 | MTR_8g027920 | 37.925 | 559 | 333 | 8 | 27 | 576 | 18 | 571 | 7.17e-135 | 405 |
| MsG0580027033.01.T01 | MTR_8g027965 | 37.943 | 564 | 338 | 6 | 21 | 576 | 12 | 571 | 1.58e-134 | 404 |
| MsG0580027033.01.T01 | MTR_8g027955 | 37.876 | 565 | 337 | 8 | 21 | 576 | 19 | 578 | 1.37e-133 | 402 |
| MsG0580027033.01.T01 | MTR_0102s0060 | 33.158 | 570 | 357 | 4 | 23 | 571 | 22 | 588 | 1.90e-120 | 369 |
| MsG0580027033.01.T01 | MTR_7g094190 | 31.414 | 573 | 362 | 12 | 19 | 567 | 4 | 569 | 1.33e-85 | 278 |
| MsG0580027033.01.T01 | MTR_7g117110 | 37.179 | 390 | 234 | 4 | 21 | 400 | 12 | 400 | 2.54e-81 | 261 |
| MsG0580027033.01.T01 | MTR_7g094190 | 31.910 | 445 | 278 | 9 | 141 | 567 | 32 | 469 | 8.96e-68 | 228 |
| MsG0580027033.01.T01 | MTR_8g037720 | 36.335 | 322 | 166 | 7 | 268 | 576 | 136 | 431 | 1.91e-62 | 213 |
| MsG0580027033.01.T01 | MTR_8g037720 | 41.414 | 99 | 55 | 1 | 24 | 119 | 3 | 101 | 2.45e-16 | 82.0 |
| MsG0580027033.01.T01 | MTR_1g047730 | 42.205 | 263 | 125 | 6 | 326 | 576 | 111 | 358 | 1.78e-61 | 207 |
| MsG0580027033.01.T01 | MTR_7g094330 | 30.576 | 278 | 150 | 7 | 141 | 408 | 32 | 276 | 4.49e-32 | 125 |
| MsG0580027033.01.T01 | MTR_3g023280 | 51.376 | 109 | 50 | 1 | 479 | 584 | 19 | 127 | 9.30e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027033.01.T01 | AT2G14960 | 82.403 | 591 | 99 | 3 | 1 | 588 | 1 | 589 | 0.0 | 1014 |
| MsG0580027033.01.T01 | AT4G37390 | 76.783 | 603 | 125 | 4 | 1 | 588 | 1 | 603 | 0.0 | 953 |
| MsG0580027033.01.T01 | AT2G23170 | 77.983 | 595 | 124 | 4 | 1 | 588 | 1 | 595 | 0.0 | 951 |
| MsG0580027033.01.T01 | AT1G59500 | 72.864 | 597 | 149 | 5 | 1 | 586 | 1 | 595 | 0.0 | 899 |
| MsG0580027033.01.T01 | AT5G54510 | 66.553 | 586 | 178 | 3 | 17 | 584 | 19 | 604 | 0.0 | 821 |
| MsG0580027033.01.T01 | AT4G27260 | 65.812 | 585 | 182 | 3 | 18 | 584 | 20 | 604 | 0.0 | 810 |
| MsG0580027033.01.T01 | AT1G28130 | 56.155 | 593 | 229 | 8 | 22 | 584 | 13 | 604 | 0.0 | 686 |
| MsG0580027033.01.T01 | AT2G47750 | 50.940 | 585 | 264 | 8 | 17 | 584 | 7 | 585 | 0.0 | 595 |
| MsG0580027033.01.T01 | AT1G23160 | 50.000 | 570 | 274 | 5 | 17 | 576 | 9 | 577 | 0.0 | 588 |
| MsG0580027033.01.T01 | AT5G13320 | 46.988 | 581 | 297 | 4 | 6 | 576 | 10 | 589 | 0.0 | 569 |
| MsG0580027033.01.T01 | AT5G13320 | 47.295 | 573 | 291 | 4 | 14 | 576 | 3 | 574 | 0.0 | 568 |
| MsG0580027033.01.T01 | AT5G13320 | 47.295 | 573 | 291 | 4 | 14 | 576 | 3 | 574 | 0.0 | 568 |
| MsG0580027033.01.T01 | AT5G13370 | 48.090 | 576 | 282 | 7 | 22 | 582 | 13 | 586 | 0.0 | 556 |
| MsG0580027033.01.T01 | AT5G13360 | 48.547 | 585 | 272 | 9 | 19 | 582 | 87 | 663 | 0.0 | 541 |
| MsG0580027033.01.T01 | AT5G13360 | 48.547 | 585 | 272 | 9 | 19 | 582 | 9 | 585 | 0.0 | 541 |
| MsG0580027033.01.T01 | AT5G13360 | 48.547 | 585 | 272 | 9 | 19 | 582 | 9 | 585 | 0.0 | 541 |
| MsG0580027033.01.T01 | AT5G13380 | 46.864 | 574 | 289 | 5 | 23 | 582 | 44 | 615 | 0.0 | 536 |
| MsG0580027033.01.T01 | AT1G28130 | 56.182 | 461 | 174 | 6 | 152 | 584 | 1 | 461 | 0.0 | 531 |
| MsG0580027033.01.T01 | AT5G13350 | 46.552 | 580 | 292 | 8 | 19 | 582 | 9 | 586 | 0.0 | 527 |
| MsG0580027033.01.T01 | AT5G13350 | 46.552 | 580 | 292 | 8 | 19 | 582 | 9 | 586 | 0.0 | 527 |
| MsG0580027033.01.T01 | AT1G48660 | 44.621 | 567 | 304 | 5 | 23 | 580 | 7 | 572 | 2.47e-179 | 519 |
| MsG0580027033.01.T01 | AT1G48660 | 45.053 | 566 | 300 | 6 | 23 | 580 | 7 | 569 | 2.69e-179 | 519 |
| MsG0580027033.01.T01 | AT5G51470 | 44.803 | 558 | 301 | 4 | 26 | 577 | 16 | 572 | 8.84e-172 | 500 |
| MsG0580027033.01.T01 | AT1G48670 | 41.918 | 563 | 267 | 6 | 26 | 580 | 11 | 521 | 3.44e-152 | 448 |
| MsG0580027033.01.T01 | AT5G51470 | 44.050 | 479 | 262 | 3 | 104 | 576 | 3 | 481 | 2.58e-141 | 419 |
| MsG0580027033.01.T01 | AT2G46370 | 39.146 | 562 | 323 | 9 | 27 | 576 | 18 | 572 | 1.13e-137 | 412 |
| MsG0580027033.01.T01 | AT2G46370 | 39.146 | 562 | 323 | 9 | 27 | 576 | 18 | 572 | 1.13e-137 | 412 |
| MsG0580027033.01.T01 | AT2G46370 | 39.076 | 563 | 324 | 9 | 26 | 576 | 28 | 583 | 1.32e-137 | 413 |
| MsG0580027033.01.T01 | AT1G48670 | 47.677 | 409 | 207 | 3 | 179 | 580 | 2 | 410 | 5.61e-137 | 405 |
| MsG0580027033.01.T01 | AT4G03400 | 34.495 | 574 | 344 | 6 | 25 | 571 | 14 | 582 | 4.13e-122 | 373 |
| MsG0580027033.01.T01 | AT4G03400 | 34.495 | 574 | 344 | 6 | 25 | 571 | 14 | 582 | 4.13e-122 | 373 |
| MsG0580027033.01.T01 | AT2G46370 | 38.400 | 500 | 291 | 7 | 87 | 576 | 1 | 493 | 1.45e-120 | 366 |
| MsG0580027033.01.T01 | AT1G48690 | 40.415 | 193 | 107 | 3 | 22 | 210 | 2 | 190 | 8.59e-41 | 147 |
Find 160 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCGAAATTGGCATCATTTA+TGG | 0.099376 | 5:-51578664 | MsG0580027033.01.T01:CDS |
| CGTTAAGTTTGAAGCGTTTA+AGG | 0.105133 | 5:+51580109 | None:intergenic |
| TTAAATCACCTTATCCTTTC+AGG | 0.112309 | 5:+51577745 | None:intergenic |
| AATCGTTGAATTCTGTTTAT+AGG | 0.179457 | 5:-51577981 | MsG0580027033.01.T01:CDS |
| TACAATGACATCTAAATATT+TGG | 0.200273 | 5:+51578584 | None:intergenic |
| ACCATAAATGATGCCAATTT+CGG | 0.222994 | 5:+51578663 | None:intergenic |
| AAGAATGCTCAAATGAAAAT+TGG | 0.234619 | 5:-51578638 | MsG0580027033.01.T01:CDS |
| TACTCCTATAATGGAGCTTT+TGG | 0.260700 | 5:-51577818 | MsG0580027033.01.T01:CDS |
| TATCAAACCCGACCCGAAAT+TGG | 0.272388 | 5:-51578676 | MsG0580027033.01.T01:CDS |
| AAGGACACCAGGTGGTTTAT+TGG | 0.276363 | 5:-51579012 | MsG0580027033.01.T01:CDS |
| AAAACTGATGCCAACAATTA+AGG | 0.280114 | 5:-51579766 | MsG0580027033.01.T01:CDS |
| GAGTCCAAAAGCTCCATTAT+AGG | 0.283190 | 5:+51577814 | None:intergenic |
| CCATAAATGATGCCAATTTC+GGG | 0.284070 | 5:+51578664 | None:intergenic |
| GAATTCCTACCTCACGAATC+AGG | 0.303669 | 5:-51578393 | MsG0580027033.01.T01:CDS |
| CATTCTTTCGACGCACAAAA+TGG | 0.304672 | 5:+51578229 | None:intergenic |
| TATTTAGATGTCATTGTAAC+TGG | 0.310356 | 5:-51578579 | MsG0580027033.01.T01:CDS |
| ACATCTAAATATTTGGTGTT+AGG | 0.335608 | 5:+51578591 | None:intergenic |
| CTGGTCTTCTCCGTGCAATT+AGG | 0.337068 | 5:-51578800 | MsG0580027033.01.T01:CDS |
| CAGGTCATTATGTGATATAT+TGG | 0.340991 | 5:-51578071 | MsG0580027033.01.T01:CDS |
| TTGTAGTAACTTGTGAGAAC+TGG | 0.342828 | 5:+51578984 | None:intergenic |
| TTAGGTTCCTTCAGCTCAAT+TGG | 0.345131 | 5:-51578782 | MsG0580027033.01.T01:CDS |
| CTTAAACGCTTCAAACTTAA+CGG | 0.349894 | 5:-51580108 | MsG0580027033.01.T01:CDS |
| AAACAATTGAGTACCTTGTT+AGG | 0.354939 | 5:+51579956 | None:intergenic |
| GCATTTGAGTATACATGCTT+TGG | 0.355525 | 5:+51578877 | None:intergenic |
| CAGCGCCGAGGCGGAGGACT+TGG | 0.357333 | 5:+51578832 | None:intergenic |
| ATGGGATGAGCAGAGAGAAT+TGG | 0.357351 | 5:+51579988 | None:intergenic |
| TCCAACTCTTCCTTAATTGT+TGG | 0.367620 | 5:+51579756 | None:intergenic |
| TCAACAATTTCGTCACCATT+AGG | 0.369734 | 5:-51580255 | MsG0580027033.01.T01:CDS |
| TTGAATGTCGTGGGCTAGTT+CGG | 0.379478 | 5:+51578758 | None:intergenic |
| CAATTGGACCATTGGAGATA+AGG | 0.379586 | 5:-51577936 | MsG0580027033.01.T01:CDS |
| AAGGAATAATCACAAGGATT+TGG | 0.385048 | 5:-51578614 | MsG0580027033.01.T01:CDS |
| GGGCAGAGAATGGCTTCATT+TGG | 0.385806 | 5:+51578909 | None:intergenic |
| AATTGGACCATTGGAGATAA+GGG | 0.390905 | 5:-51577935 | MsG0580027033.01.T01:CDS |
| AATTCAAAGTAGGCCATGTT+TGG | 0.394151 | 5:+51578411 | None:intergenic |
| TTCAGTTCTGGTACTTCAGC+TGG | 0.402301 | 5:-51579795 | MsG0580027033.01.T01:intron |
| GAATAGGTGTTGTTTGGAAA+TGG | 0.409700 | 5:-51578007 | MsG0580027033.01.T01:CDS |
| GGTGTTGAATAGGTGTTGTT+TGG | 0.422522 | 5:-51578013 | MsG0580027033.01.T01:CDS |
| AGAATGCTCAAATGAAAATT+GGG | 0.430991 | 5:-51578637 | MsG0580027033.01.T01:CDS |
| ATGGTTTGCACATTGGATTA+AGG | 0.431625 | 5:+51578457 | None:intergenic |
| CTTGAATGTTTCACGGTCGA+TGG | 0.433177 | 5:+51580083 | None:intergenic |
| TAAATCACCTTATCCTTTCA+GGG | 0.435307 | 5:+51577746 | None:intergenic |
| CGAGTCATGAGGTGTTGAAT+AGG | 0.435910 | 5:-51578023 | MsG0580027033.01.T01:CDS |
| ATTCTGTTTATAGGCAATGT+AGG | 0.437291 | 5:-51577972 | MsG0580027033.01.T01:CDS |
| AGGGTTGCGGATCATTCAAT+TGG | 0.439629 | 5:-51577952 | MsG0580027033.01.T01:CDS |
| GGAACTTACAGGTTCATAAC+TGG | 0.440301 | 5:+51579702 | None:intergenic |
| CAAAGACAGCGCCGAGGCGG+AGG | 0.445835 | 5:+51578826 | None:intergenic |
| CTCGGCGCTGTCTTTGCCTC+TGG | 0.447709 | 5:-51578819 | MsG0580027033.01.T01:CDS |
| AATGATGCCAATTTCGGGTC+GGG | 0.448903 | 5:+51578669 | None:intergenic |
| TACATGCTTTGGAATGAGTC+GGG | 0.450583 | 5:+51578888 | None:intergenic |
| TCACACGCAGGTGGACCTAA+TGG | 0.456335 | 5:+51580240 | None:intergenic |
| CACTCTTTCTTGAACGGCAT+CGG | 0.459349 | 5:+51580170 | None:intergenic |
| GGACTTGTGTAGACATTGTA+CGG | 0.459915 | 5:+51578930 | None:intergenic |
| TTGGCGATACGCTGAATCTC+TGG | 0.464115 | 5:+51580024 | None:intergenic |
| AGGTCATTATGTGATATATT+GGG | 0.464196 | 5:-51578070 | MsG0580027033.01.T01:CDS |
| GGGTCCAATGTGGCAAATCT+TGG | 0.475897 | 5:+51577767 | None:intergenic |
| TTCCAACCTCCACCTCAGTA+AGG | 0.479383 | 5:+51578352 | None:intergenic |
| ATTGTACGGGTCAAAGGGTC+GGG | 0.481788 | 5:+51578944 | None:intergenic |
| GGTGACATTCTCCGTGTCAC+CGG | 0.482004 | 5:-51578276 | MsG0580027033.01.T01:CDS |
| GAATGAGTCGGGGCAGAGAA+TGG | 0.483203 | 5:+51578899 | None:intergenic |
| GTGACATTCTCCGTGTCACC+GGG | 0.486229 | 5:-51578275 | MsG0580027033.01.T01:CDS |
| TAGGTTCCTTCAGCTCAATT+GGG | 0.487597 | 5:-51578781 | MsG0580027033.01.T01:CDS |
| CTATTCAACACCTCATGACT+CGG | 0.489683 | 5:+51578024 | None:intergenic |
| ACCTCAGATGGTTTGCACAT+TGG | 0.491763 | 5:+51578450 | None:intergenic |
| GCCAACAATTAAGGAAGAGT+TGG | 0.492449 | 5:-51579757 | MsG0580027033.01.T01:CDS |
| CACTTAATTACTACAGTGGT+GGG | 0.494137 | 5:-51578533 | MsG0580027033.01.T01:CDS |
| TTCTGTTTATAGGCAATGTA+GGG | 0.495131 | 5:-51577971 | MsG0580027033.01.T01:CDS |
| GAATGGAACAGTTATGTGCC+AGG | 0.496411 | 5:-51579083 | MsG0580027033.01.T01:intron |
| TTCGATGAATCGAAGTGCCT+TGG | 0.498023 | 5:+51580209 | None:intergenic |
| AGGTCCCGGTTTGAATGTCG+TGG | 0.500373 | 5:+51578748 | None:intergenic |
| GTAGACATTGTACGGGTCAA+AGG | 0.501669 | 5:+51578938 | None:intergenic |
| TCTTTGTCTTGAATGTTTCA+CGG | 0.504579 | 5:+51580076 | None:intergenic |
| GGATCATTCAATTGGACCAT+TGG | 0.509299 | 5:-51577944 | MsG0580027033.01.T01:CDS |
| CCAGGCTTGGACAAAGGAAA+AGG | 0.509657 | 5:-51579065 | MsG0580027033.01.T01:CDS |
| CTAGCCCACGACATTCAAAC+CGG | 0.513627 | 5:-51578753 | MsG0580027033.01.T01:CDS |
| GAGATAAGGGTTGTGAAGAG+TGG | 0.515628 | 5:-51577922 | MsG0580027033.01.T01:CDS |
| AGGCAAAGACAGCGCCGAGG+CGG | 0.517086 | 5:+51578823 | None:intergenic |
| AACTCTGTAACGGTTCAATC+CGG | 0.517270 | 5:+51578299 | None:intergenic |
| ATTGGACCCCTGAAAGGATA+AGG | 0.517985 | 5:-51577753 | MsG0580027033.01.T01:CDS |
| CCTTGTTAGGAATTCAGAGA+TGG | 0.518359 | 5:+51579969 | None:intergenic |
| TGTCATTGTAACTGGTGCTA+TGG | 0.521896 | 5:-51578571 | MsG0580027033.01.T01:CDS |
| TGTTGGCCTTACTGAGGTGG+AGG | 0.527008 | 5:-51578358 | MsG0580027033.01.T01:CDS |
| GCAGACACGGAGACCATACC+AGG | 0.528391 | 5:-51578090 | MsG0580027033.01.T01:CDS |
| GAACAGTTATGTGCCAGGCT+TGG | 0.530590 | 5:-51579078 | MsG0580027033.01.T01:intron |
| TATCACATAATGACCTGGTA+TGG | 0.530639 | 5:+51578077 | None:intergenic |
| AGCTAACACTCTTTCTTGAA+CGG | 0.533051 | 5:+51580164 | None:intergenic |
| TGTAGTAACTTGTGAGAACT+GGG | 0.533261 | 5:+51578985 | None:intergenic |
| AATTCCTACCTCACGAATCA+GGG | 0.533465 | 5:-51578392 | MsG0580027033.01.T01:CDS |
| GGAGTAAAATTAACACACCT+TGG | 0.535014 | 5:+51577835 | None:intergenic |
| CGCAACCAAGTCCTCCGCCT+CGG | 0.536258 | 5:-51578837 | MsG0580027033.01.T01:CDS |
| GGATTGAACCGTTACAGAGT+TGG | 0.542624 | 5:-51578297 | MsG0580027033.01.T01:CDS |
| GACTTGTGTAGACATTGTAC+GGG | 0.543894 | 5:+51578931 | None:intergenic |
| AATTGGAGAGCGATCACCAT+TGG | 0.544899 | 5:+51580005 | None:intergenic |
| TCCAATGTGCAAACCATCTG+AGG | 0.551056 | 5:-51578451 | MsG0580027033.01.T01:CDS |
| TAGACATTGTACGGGTCAAA+GGG | 0.552212 | 5:+51578939 | None:intergenic |
| TGAGAAGGCTGTATAGAAGC+TGG | 0.552464 | 5:+51579727 | None:intergenic |
| AACTGTTGGCCTTACTGAGG+TGG | 0.556999 | 5:-51578361 | MsG0580027033.01.T01:CDS |
| TATTCAACACCTCATGACTC+GGG | 0.558089 | 5:+51578025 | None:intergenic |
| GTAAGGCCAACAGTTCTAGT+TGG | 0.562466 | 5:+51578369 | None:intergenic |
| CTTGTTAGGAATTCAGAGAT+GGG | 0.564594 | 5:+51579970 | None:intergenic |
| CATTGTACGGGTCAAAGGGT+CGG | 0.565800 | 5:+51578943 | None:intergenic |
| TCAGGGCCAACTAGAACTGT+TGG | 0.566536 | 5:-51578375 | MsG0580027033.01.T01:CDS |
| ACATCATCGTACGTGATGAC+AGG | 0.568242 | 5:+51580051 | None:intergenic |
| ACACTTAATTACTACAGTGG+TGG | 0.569697 | 5:-51578534 | MsG0580027033.01.T01:CDS |
| GTAGGCCATGTTTGGCATGA+TGG | 0.569951 | 5:+51578419 | None:intergenic |
| GGCCTTACTGAGGTGGAGGT+TGG | 0.571411 | 5:-51578354 | MsG0580027033.01.T01:CDS |
| ATACATGCTTTGGAATGAGT+CGG | 0.571825 | 5:+51578887 | None:intergenic |
| GTTCGGCCCAATTGAGCTGA+AGG | 0.577120 | 5:+51578775 | None:intergenic |
| GTGAGGTAGGAATTCAAAGT+AGG | 0.577752 | 5:+51578401 | None:intergenic |
| CAATATATCACATAATGACC+TGG | 0.578248 | 5:+51578072 | None:intergenic |
| TTATAGGCAATGTAGGGTTG+CGG | 0.579521 | 5:-51577965 | MsG0580027033.01.T01:CDS |
| TGCCACATTGGACCCCTGAA+AGG | 0.581160 | 5:-51577759 | MsG0580027033.01.T01:CDS |
| GCTTCCTCAGAATGCTACTT+CGG | 0.581209 | 5:-51578486 | MsG0580027033.01.T01:CDS |
| GAGATTCAGCGTATCGCCAA+TGG | 0.582720 | 5:-51580021 | MsG0580027033.01.T01:CDS |
| TATGTGCCAGGCTTGGACAA+AGG | 0.583890 | 5:-51579071 | MsG0580027033.01.T01:CDS |
| AAATGATGCCAATTTCGGGT+CGG | 0.583995 | 5:+51578668 | None:intergenic |
| TGCTCAAATGAAAATTGGGA+AGG | 0.585393 | 5:-51578633 | MsG0580027033.01.T01:CDS |
| TTCACAACCCTTATCTCCAA+TGG | 0.585801 | 5:+51577928 | None:intergenic |
| GTAACTTGTGAGAACTGGGC+GGG | 0.588468 | 5:+51578989 | None:intergenic |
| CCACTGTAGTAATTAAGTGT+TGG | 0.589297 | 5:+51578537 | None:intergenic |
| TAAATCAATATAAAGTTCCA+AGG | 0.589347 | 5:-51577852 | MsG0580027033.01.T01:CDS |
| TTGGCCCTGATTCGTGAGGT+AGG | 0.591553 | 5:+51578388 | None:intergenic |
| TTAGCCAAGATTTGCCACAT+TGG | 0.594038 | 5:-51577771 | MsG0580027033.01.T01:CDS |
| GCGTCTTTGTCACACGCAGG+TGG | 0.596535 | 5:+51580231 | None:intergenic |
| TTGGCGTCTTTGTCACACGC+AGG | 0.597121 | 5:+51580228 | None:intergenic |
| GTAACGGTTCAATCCGGCGT+AGG | 0.597714 | 5:+51578305 | None:intergenic |
| GGTTCATAACTGGCATGAGA+AGG | 0.599092 | 5:+51579712 | None:intergenic |
| AAATCACCTTATCCTTTCAG+GGG | 0.599858 | 5:+51577747 | None:intergenic |
| CGACGCACAAAATGGAATTG+TGG | 0.600454 | 5:+51578237 | None:intergenic |
| AGTTATGAAACCCGGTGACA+CGG | 0.604464 | 5:+51578265 | None:intergenic |
| ATACACCATCATGCCAAACA+TGG | 0.605774 | 5:-51578424 | MsG0580027033.01.T01:CDS |
| GGTCCCGGTTTGAATGTCGT+GGG | 0.606229 | 5:+51578749 | None:intergenic |
| CCATCTCTGAATTCCTAACA+AGG | 0.606610 | 5:-51579969 | MsG0580027033.01.T01:intron |
| GCATACATAGTACATGAAAG+AGG | 0.609084 | 5:+51578507 | None:intergenic |
| ATGGATTATGCAATCTCAAG+AGG | 0.609927 | 5:-51577883 | MsG0580027033.01.T01:CDS |
| GGGCGGGCCAATAAACCACC+TGG | 0.611629 | 5:+51579005 | None:intergenic |
| TGTGTTGCTTAGTATTGACT+CGG | 0.611775 | 5:-51578208 | MsG0580027033.01.T01:CDS |
| TGTTTGTGAAGTCAGAAACA+AGG | 0.618361 | 5:-51579031 | MsG0580027033.01.T01:CDS |
| CTAGTTGGCCCTGATTCGTG+AGG | 0.624881 | 5:+51578384 | None:intergenic |
| ATGTATACTCAAATGCTATG+TGG | 0.627170 | 5:-51578870 | MsG0580027033.01.T01:CDS |
| AAGTCAGAAACAAGGACACC+AGG | 0.629086 | 5:-51579023 | MsG0580027033.01.T01:CDS |
| AGCAGACTCCCCGAGTCATG+AGG | 0.629198 | 5:-51578034 | MsG0580027033.01.T01:CDS |
| TGCGTGTGACAAAGACGCCA+AGG | 0.632461 | 5:-51580226 | MsG0580027033.01.T01:CDS |
| ATCCTTTCAGGGGTCCAATG+TGG | 0.633793 | 5:+51577757 | None:intergenic |
| CCAACACTTAATTACTACAG+TGG | 0.642475 | 5:-51578537 | MsG0580027033.01.T01:CDS |
| GAATGTCACCAACTCTGTAA+CGG | 0.642994 | 5:+51578289 | None:intergenic |
| GCTGAAGGAACCTAATTGCA+CGG | 0.646007 | 5:+51578790 | None:intergenic |
| CAGAGGCAAAGACAGCGCCG+AGG | 0.652151 | 5:+51578820 | None:intergenic |
| AAGTCCGAAGTAGCATTCTG+AGG | 0.652236 | 5:+51578482 | None:intergenic |
| ACATGCTTTGGAATGAGTCG+GGG | 0.673461 | 5:+51578889 | None:intergenic |
| CTTGTGATCACAACCTACGC+CGG | 0.686723 | 5:-51578318 | MsG0580027033.01.T01:CDS |
| TAGCCCACGACATTCAAACC+GGG | 0.688554 | 5:-51578752 | MsG0580027033.01.T01:CDS |
| ATGGTGTATGAAACCTCAGA+TGG | 0.689410 | 5:+51578438 | None:intergenic |
| TAGAACTGTTGGCCTTACTG+AGG | 0.692044 | 5:-51578364 | MsG0580027033.01.T01:CDS |
| ATTGGGAAGGAATAATCACA+AGG | 0.697048 | 5:-51578620 | MsG0580027033.01.T01:CDS |
| ATTCAACACCTCATGACTCG+GGG | 0.699615 | 5:+51578026 | None:intergenic |
| TGGTGCTGAGTTATGAAACC+CGG | 0.702188 | 5:+51578257 | None:intergenic |
| GTACACGAGTTATGCAGACA+CGG | 0.716614 | 5:-51578103 | MsG0580027033.01.T01:CDS |
| TCAGAAACAAGGACACCAGG+TGG | 0.735786 | 5:-51579020 | MsG0580027033.01.T01:CDS |
| AATTGCACGGAGAAGACCAG+AGG | 0.736919 | 5:+51578803 | None:intergenic |
| AGTAACTTGTGAGAACTGGG+CGG | 0.746811 | 5:+51578988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATTATTTTTTTAAATT+GGG | - | Chr5:51578187-51578206 | MsG0580027033.01.T01:CDS | 0.0% |
| !!! | TATTAATTATTTTTTTAAAT+TGG | - | Chr5:51578186-51578205 | MsG0580027033.01.T01:CDS | 0.0% |
| !! | ATATATAAAAAACAAAAAGT+AGG | + | Chr5:51578141-51578160 | None:intergenic | 10.0% |
| !!! | ATGTACATTTTTATTTTTTT+AGG | - | Chr5:51578591-51578610 | MsG0580027033.01.T01:CDS | 10.0% |
| !!! | ATTATTGTTATTTTTTTTGA+AGG | - | Chr5:51578496-51578515 | MsG0580027033.01.T01:CDS | 10.0% |
| !!! | ATTTTTTTTTTTAAAAAAGG+AGG | - | Chr5:51578724-51578743 | MsG0580027033.01.T01:CDS | 10.0% |
| !!! | CTCATTTTTTTTTTTAAAAA+AGG | - | Chr5:51578721-51578740 | MsG0580027033.01.T01:CDS | 10.0% |
| !! | AAAATTCAATATACTAGTAA+TGG | + | Chr5:51578698-51578717 | None:intergenic | 15.0% |
| !!! | TTGTATATACTTTAGAAATA+TGG | + | Chr5:51578828-51578847 | None:intergenic | 15.0% |
| !! | GGAAATTATTGTAACAAAAA+CGG | - | Chr5:51578517-51578536 | MsG0580027033.01.T01:CDS | 20.0% |
| !! | TAAATCAATATAAAGTTCCA+AGG | - | Chr5:51580165-51580184 | MsG0580027033.01.T01:CDS | 20.0% |
| !! | TACAATGACATCTAAATATT+TGG | + | Chr5:51579436-51579455 | None:intergenic | 20.0% |
| !! | TATAGAGATAAAATAACGTT+GGG | + | Chr5:51578758-51578777 | None:intergenic | 20.0% |
| !! | TTATAGAGATAAAATAACGT+TGG | + | Chr5:51578759-51578778 | None:intergenic | 20.0% |
| !! | TTATCCTAATAAATAGTTGA+AGG | + | Chr5:51578413-51578432 | None:intergenic | 20.0% |
| !!! | AAAAGGGTTATTATTTTGAA+TGG | - | Chr5:51578917-51578936 | MsG0580027033.01.T01:CDS | 20.0% |
| !!! | AGAGTTTTTTTACTTATAAC+TGG | - | Chr5:51578461-51578480 | MsG0580027033.01.T01:CDS | 20.0% |
| !!! | CGTTATTTTATCTCTATAAA+AGG | - | Chr5:51578760-51578779 | MsG0580027033.01.T01:CDS | 20.0% |
| !!! | TCATGTGATCTTTTATATTT+TGG | + | Chr5:51579314-51579333 | None:intergenic | 20.0% |
| !!! | TGTTAATTTTACTCCTATAA+TGG | - | Chr5:51580190-51580209 | MsG0580027033.01.T01:CDS | 20.0% |
| ! | AAACACATTAATTAAGCACA+TGG | + | Chr5:51578372-51578391 | None:intergenic | 25.0% |
| ! | AAGAATGCTCAAATGAAAAT+TGG | - | Chr5:51579379-51579398 | MsG0580027033.01.T01:intron | 25.0% |
| ! | AATCGTTGAATTCTGTTTAT+AGG | - | Chr5:51580036-51580055 | MsG0580027033.01.T01:CDS | 25.0% |
| ! | AGAATGCTCAAATGAAAATT+GGG | - | Chr5:51579380-51579399 | MsG0580027033.01.T01:intron | 25.0% |
| ! | AGACTCAATTATTTGAAAGA+TGG | + | Chr5:51578339-51578358 | None:intergenic | 25.0% |
| ! | AGGTCATTATGTGATATATT+GGG | - | Chr5:51579947-51579966 | MsG0580027033.01.T01:intron | 25.0% |
| ! | GAAACCTTCAACTATTTATT+AGG | - | Chr5:51578406-51578425 | MsG0580027033.01.T01:CDS | 25.0% |
| ! | TATTTAGATGTCATTGTAAC+TGG | - | Chr5:51579438-51579457 | MsG0580027033.01.T01:intron | 25.0% |
| !!! | ACATCTAAATATTTGGTGTT+AGG | + | Chr5:51579429-51579448 | None:intergenic | 25.0% |
| !!! | ATATTTTGGTCAGTGATTTT+AGG | + | Chr5:51579300-51579319 | None:intergenic | 25.0% |
| !!! | TCTTTTGTTTAGTCGTTAAT+TGG | - | Chr5:51578086-51578105 | MsG0580027033.01.T01:CDS | 25.0% |
| !!! | TTTTAAAAAAGGAGGATCAA+AGG | - | Chr5:51578732-51578751 | MsG0580027033.01.T01:CDS | 25.0% |
| AAAACTGATGCCAACAATTA+AGG | - | Chr5:51578251-51578270 | MsG0580027033.01.T01:CDS | 30.0% | |
| AAACAATTGAGTACCTTGTT+AGG | + | Chr5:51578064-51578083 | None:intergenic | 30.0% | |
| AAGGAATAATCACAAGGATT+TGG | - | Chr5:51579403-51579422 | MsG0580027033.01.T01:intron | 30.0% | |
| AATTAAGCACATGGTATATG+TGG | + | Chr5:51578363-51578382 | None:intergenic | 30.0% | |
| ACCATAAATGATGCCAATTT+CGG | + | Chr5:51579357-51579376 | None:intergenic | 30.0% | |
| ATGTATACTCAAATGCTATG+TGG | - | Chr5:51579147-51579166 | MsG0580027033.01.T01:intron | 30.0% | |
| ATTCTGTTTATAGGCAATGT+AGG | - | Chr5:51580045-51580064 | MsG0580027033.01.T01:CDS | 30.0% | |
| ATTTGAAAGATGGAACTTAC+AGG | + | Chr5:51578329-51578348 | None:intergenic | 30.0% | |
| ATTTGTGCTAAGTGCTAAAA+AGG | - | Chr5:51578900-51578919 | MsG0580027033.01.T01:CDS | 30.0% | |
| CAATATATCACATAATGACC+TGG | + | Chr5:51579948-51579967 | None:intergenic | 30.0% | |
| CAGGTCATTATGTGATATAT+TGG | - | Chr5:51579946-51579965 | MsG0580027033.01.T01:intron | 30.0% | |
| CTTAAACGCTTCAAACTTAA+CGG | - | Chr5:51577909-51577928 | MsG0580027033.01.T01:CDS | 30.0% | |
| TCTTTGTCTTGAATGTTTCA+CGG | + | Chr5:51577944-51577963 | None:intergenic | 30.0% | |
| TTCTGTTTATAGGCAATGTA+GGG | - | Chr5:51580046-51580065 | MsG0580027033.01.T01:CDS | 30.0% | |
| TTTGTGCTAAGTGCTAAAAA+GGG | - | Chr5:51578901-51578920 | MsG0580027033.01.T01:CDS | 30.0% | |
| ! | AACTCTTGAATTTTCAGTTC+TGG | - | Chr5:51578210-51578229 | MsG0580027033.01.T01:CDS | 30.0% |
| !!! | GTCAGTGATTTTAGGATTTA+AGG | + | Chr5:51579292-51579311 | None:intergenic | 30.0% |
| AATTCAAAGTAGGCCATGTT+TGG | + | Chr5:51579609-51579628 | None:intergenic | 35.0% | |
| AATTGGACCATTGGAGATAA+GGG | - | Chr5:51580082-51580101 | MsG0580027033.01.T01:CDS | 35.0% | |
| ACACTTAATTACTACAGTGG+TGG | - | Chr5:51579483-51579502 | MsG0580027033.01.T01:intron | 35.0% | |
| AGCTAACACTCTTTCTTGAA+CGG | + | Chr5:51577856-51577875 | None:intergenic | 35.0% | |
| ATTGGGAAGGAATAATCACA+AGG | - | Chr5:51579397-51579416 | MsG0580027033.01.T01:intron | 35.0% | |
| CACTTAATTACTACAGTGGT+GGG | - | Chr5:51579484-51579503 | MsG0580027033.01.T01:intron | 35.0% | |
| CCAACACTTAATTACTACAG+TGG | - | Chr5:51579480-51579499 | MsG0580027033.01.T01:intron | 35.0% | |
| CCACTGTAGTAATTAAGTGT+TGG | + | Chr5:51579483-51579502 | None:intergenic | 35.0% | |
| CCATAAATGATGCCAATTTC+GGG | + | Chr5:51579356-51579375 | None:intergenic | 35.0% | |
| CTTGTTAGGAATTCAGAGAT+GGG | + | Chr5:51578050-51578069 | None:intergenic | 35.0% | |
| GCATACATAGTACATGAAAG+AGG | + | Chr5:51579513-51579532 | None:intergenic | 35.0% | |
| GCATTTGAGTATACATGCTT+TGG | + | Chr5:51579143-51579162 | None:intergenic | 35.0% | |
| GGAGTAAAATTAACACACCT+TGG | + | Chr5:51580185-51580204 | None:intergenic | 35.0% | |
| TAAATAGTTGAAGGTTTCGC+TGG | + | Chr5:51578404-51578423 | None:intergenic | 35.0% | |
| TATCACATAATGACCTGGTA+TGG | + | Chr5:51579943-51579962 | None:intergenic | 35.0% | |
| TCAACAATTTCGTCACCATT+AGG | - | Chr5:51577762-51577781 | MsG0580027033.01.T01:CDS | 35.0% | |
| TCCAACTCTTCCTTAATTGT+TGG | + | Chr5:51578264-51578283 | None:intergenic | 35.0% | |
| TGCTCAAATGAAAATTGGGA+AGG | - | Chr5:51579384-51579403 | MsG0580027033.01.T01:intron | 35.0% | |
| TGTTTGTGAAGTCAGAAACA+AGG | - | Chr5:51578986-51579005 | MsG0580027033.01.T01:CDS | 35.0% | |
| ! | ATGGATTATGCAATCTCAAG+AGG | - | Chr5:51580134-51580153 | MsG0580027033.01.T01:CDS | 35.0% |
| ! | ATGGTTTGCACATTGGATTA+AGG | + | Chr5:51579563-51579582 | None:intergenic | 35.0% |
| ! | CGTTAAGTTTGAAGCGTTTA+AGG | + | Chr5:51577911-51577930 | None:intergenic | 35.0% |
| ! | TGTAGTAACTTGTGAGAACT+GGG | + | Chr5:51579035-51579054 | None:intergenic | 35.0% |
| ! | TTGTAGTAACTTGTGAGAAC+TGG | + | Chr5:51579036-51579055 | None:intergenic | 35.0% |
| !! | ATACATGCTTTGGAATGAGT+CGG | + | Chr5:51579133-51579152 | None:intergenic | 35.0% |
| !! | GAATAGGTGTTGTTTGGAAA+TGG | - | Chr5:51580010-51580029 | MsG0580027033.01.T01:CDS | 35.0% |
| !! | TACTCCTATAATGGAGCTTT+TGG | - | Chr5:51580199-51580218 | MsG0580027033.01.T01:CDS | 35.0% |
| !! | TGTGTTGCTTAGTATTGACT+CGG | - | Chr5:51579809-51579828 | MsG0580027033.01.T01:intron | 35.0% |
| !!! | GATTTTAGGATTTAAGGTCC+CGG | + | Chr5:51579286-51579305 | None:intergenic | 35.0% |
| !!! | TTTTGAGTTTAACACGAGTG+TGG | - | Chr5:51579887-51579906 | MsG0580027033.01.T01:intron | 35.0% |
| AACTCTGTAACGGTTCAATC+CGG | + | Chr5:51579721-51579740 | None:intergenic | 40.0% | |
| AATTCCTACCTCACGAATCA+GGG | - | Chr5:51579625-51579644 | MsG0580027033.01.T01:intron | 40.0% | |
| ATACACCATCATGCCAAACA+TGG | - | Chr5:51579593-51579612 | MsG0580027033.01.T01:intron | 40.0% | |
| ATGGTGTATGAAACCTCAGA+TGG | + | Chr5:51579582-51579601 | None:intergenic | 40.0% | |
| CAATTGGACCATTGGAGATA+AGG | - | Chr5:51580081-51580100 | MsG0580027033.01.T01:CDS | 40.0% | |
| CATTCTTTCGACGCACAAAA+TGG | + | Chr5:51579791-51579810 | None:intergenic | 40.0% | |
| CCATCTCTGAATTCCTAACA+AGG | - | Chr5:51578048-51578067 | MsG0580027033.01.T01:CDS | 40.0% | |
| CCCGAAATTGGCATCATTTA+TGG | - | Chr5:51579353-51579372 | MsG0580027033.01.T01:intron | 40.0% | |
| CCTTGTTAGGAATTCAGAGA+TGG | + | Chr5:51578051-51578070 | None:intergenic | 40.0% | |
| CTATTCAACACCTCATGACT+CGG | + | Chr5:51579996-51580015 | None:intergenic | 40.0% | |
| GAATGTCACCAACTCTGTAA+CGG | + | Chr5:51579731-51579750 | None:intergenic | 40.0% | |
| GACTTGTGTAGACATTGTAC+GGG | + | Chr5:51579089-51579108 | None:intergenic | 40.0% | |
| GAGTCCAAAAGCTCCATTAT+AGG | + | Chr5:51580206-51580225 | None:intergenic | 40.0% | |
| GCCAACAATTAAGGAAGAGT+TGG | - | Chr5:51578260-51578279 | MsG0580027033.01.T01:CDS | 40.0% | |
| GGAACTTACAGGTTCATAAC+TGG | + | Chr5:51578318-51578337 | None:intergenic | 40.0% | |
| GGACTTGTGTAGACATTGTA+CGG | + | Chr5:51579090-51579109 | None:intergenic | 40.0% | |
| GGATCATTCAATTGGACCAT+TGG | - | Chr5:51580073-51580092 | MsG0580027033.01.T01:CDS | 40.0% | |
| GTGAGGTAGGAATTCAAAGT+AGG | + | Chr5:51579619-51579638 | None:intergenic | 40.0% | |
| TAGACATTGTACGGGTCAAA+GGG | + | Chr5:51579081-51579100 | None:intergenic | 40.0% | |
| TAGGTTCCTTCAGCTCAATT+GGG | - | Chr5:51579236-51579255 | MsG0580027033.01.T01:intron | 40.0% | |
| TATTCAACACCTCATGACTC+GGG | + | Chr5:51579995-51580014 | None:intergenic | 40.0% | |
| TTAGCCAAGATTTGCCACAT+TGG | - | Chr5:51580246-51580265 | MsG0580027033.01.T01:CDS | 40.0% | |
| TTAGGTTCCTTCAGCTCAAT+TGG | - | Chr5:51579235-51579254 | MsG0580027033.01.T01:intron | 40.0% | |
| TTATAGGCAATGTAGGGTTG+CGG | - | Chr5:51580052-51580071 | MsG0580027033.01.T01:CDS | 40.0% | |
| TTCACAACCCTTATCTCCAA+TGG | + | Chr5:51580092-51580111 | None:intergenic | 40.0% | |
| ! | AAATGATGCCAATTTCGGGT+CGG | + | Chr5:51579352-51579371 | None:intergenic | 40.0% |
| ! | AATGGAGCTTTTGGACTCTA+GGG | - | Chr5:51580208-51580227 | MsG0580027033.01.T01:CDS | 40.0% |
| ! | TAATGGAGCTTTTGGACTCT+AGG | - | Chr5:51580207-51580226 | MsG0580027033.01.T01:CDS | 40.0% |
| ! | TGTCATTGTAACTGGTGCTA+TGG | - | Chr5:51579446-51579465 | MsG0580027033.01.T01:intron | 40.0% |
| ! | TGTGAAGAGTGGAACTTTTG+AGG | - | Chr5:51580106-51580125 | MsG0580027033.01.T01:CDS | 40.0% |
| !! | GGTGTTGAATAGGTGTTGTT+TGG | - | Chr5:51580004-51580023 | MsG0580027033.01.T01:CDS | 40.0% |
| !! | TACATGCTTTGGAATGAGTC+GGG | + | Chr5:51579132-51579151 | None:intergenic | 40.0% |
| !! | TGGAACTTTTGAGGAGCTTA+TGG | - | Chr5:51580115-51580134 | MsG0580027033.01.T01:CDS | 40.0% |
| AAGGACACCAGGTGGTTTAT+TGG | - | Chr5:51579005-51579024 | MsG0580027033.01.T01:CDS | 45.0% | |
| AAGTCAGAAACAAGGACACC+AGG | - | Chr5:51578994-51579013 | MsG0580027033.01.T01:CDS | 45.0% | |
| AAGTCCGAAGTAGCATTCTG+AGG | + | Chr5:51579538-51579557 | None:intergenic | 45.0% | |
| AATTGGAGAGCGATCACCAT+TGG | + | Chr5:51578015-51578034 | None:intergenic | 45.0% | |
| ACATCATCGTACGTGATGAC+AGG | + | Chr5:51577969-51577988 | None:intergenic | 45.0% | |
| AGGGTTGCGGATCATTCAAT+TGG | - | Chr5:51580065-51580084 | MsG0580027033.01.T01:CDS | 45.0% | |
| AGTTATGAAACCCGGTGACA+CGG | + | Chr5:51579755-51579774 | None:intergenic | 45.0% | |
| ATGGGATGAGCAGAGAGAAT+TGG | + | Chr5:51578032-51578051 | None:intergenic | 45.0% | |
| ATTCAACACCTCATGACTCG+GGG | + | Chr5:51579994-51580013 | None:intergenic | 45.0% | |
| ATTGGACCCCTGAAAGGATA+AGG | - | Chr5:51580264-51580283 | MsG0580027033.01.T01:CDS | 45.0% | |
| CACTCTTTCTTGAACGGCAT+CGG | + | Chr5:51577850-51577869 | None:intergenic | 45.0% | |
| CGACGCACAAAATGGAATTG+TGG | + | Chr5:51579783-51579802 | None:intergenic | 45.0% | |
| CTTGAATGTTTCACGGTCGA+TGG | + | Chr5:51577937-51577956 | None:intergenic | 45.0% | |
| GAATGGAACAGTTATGTGCC+AGG | - | Chr5:51578934-51578953 | MsG0580027033.01.T01:CDS | 45.0% | |
| GAATTCCTACCTCACGAATC+AGG | - | Chr5:51579624-51579643 | MsG0580027033.01.T01:intron | 45.0% | |
| GAGATAAGGGTTGTGAAGAG+TGG | - | Chr5:51580095-51580114 | MsG0580027033.01.T01:CDS | 45.0% | |
| GCTGAAGGAACCTAATTGCA+CGG | + | Chr5:51579230-51579249 | None:intergenic | 45.0% | |
| GGATTGAACCGTTACAGAGT+TGG | - | Chr5:51579720-51579739 | MsG0580027033.01.T01:CDS | 45.0% | |
| GGTTCATAACTGGCATGAGA+AGG | + | Chr5:51578308-51578327 | None:intergenic | 45.0% | |
| GTACACGAGTTATGCAGACA+CGG | - | Chr5:51579914-51579933 | MsG0580027033.01.T01:intron | 45.0% | |
| GTAGACATTGTACGGGTCAA+AGG | + | Chr5:51579082-51579101 | None:intergenic | 45.0% | |
| GTCAGAGCTACAAAAAGCAG+TGG | - | Chr5:51579845-51579864 | MsG0580027033.01.T01:intron | 45.0% | |
| TATCAAACCCGACCCGAAAT+TGG | - | Chr5:51579341-51579360 | MsG0580027033.01.T01:intron | 45.0% | |
| TCCAATGTGCAAACCATCTG+AGG | - | Chr5:51579566-51579585 | MsG0580027033.01.T01:intron | 45.0% | |
| TGAGAAGGCTGTATAGAAGC+TGG | + | Chr5:51578293-51578312 | None:intergenic | 45.0% | |
| ! | AATGATGCCAATTTCGGGTC+GGG | + | Chr5:51579351-51579370 | None:intergenic | 45.0% |
| ! | ACCTCAGATGGTTTGCACAT+TGG | + | Chr5:51579570-51579589 | None:intergenic | 45.0% |
| ! | AGTAACTTGTGAGAACTGGG+CGG | + | Chr5:51579032-51579051 | None:intergenic | 45.0% |
| ! | GCTTCCTCAGAATGCTACTT+CGG | - | Chr5:51579531-51579550 | MsG0580027033.01.T01:intron | 45.0% |
| ! | GTAAGGCCAACAGTTCTAGT+TGG | + | Chr5:51579651-51579670 | None:intergenic | 45.0% |
| ! | TGGTGCTGAGTTATGAAACC+CGG | + | Chr5:51579763-51579782 | None:intergenic | 45.0% |
| ! | TTCAGTTCTGGTACTTCAGC+TGG | - | Chr5:51578222-51578241 | MsG0580027033.01.T01:CDS | 45.0% |
| ! | TTCGATGAATCGAAGTGCCT+TGG | + | Chr5:51577811-51577830 | None:intergenic | 45.0% |
| !! | ACATGCTTTGGAATGAGTCG+GGG | + | Chr5:51579131-51579150 | None:intergenic | 45.0% |
| !! | CGAGTCATGAGGTGTTGAAT+AGG | - | Chr5:51579994-51580013 | MsG0580027033.01.T01:CDS | 45.0% |
| !! | TAGAACTGTTGGCCTTACTG+AGG | - | Chr5:51579653-51579672 | MsG0580027033.01.T01:intron | 45.0% |
| !! | TTGAATGTCGTGGGCTAGTT+CGG | + | Chr5:51579262-51579281 | None:intergenic | 45.0% |
| !!! | TTATATATAATATTTTTAGA+TGG | - | Chr5:51578153-51578172 | MsG0580027033.01.T01:CDS | 5.0% |
| AATTGCACGGAGAAGACCAG+AGG | + | Chr5:51579217-51579236 | None:intergenic | 50.0% | |
| ATCCTTTCAGGGGTCCAATG+TGG | + | Chr5:51580263-51580282 | None:intergenic | 50.0% | |
| ATTGTACGGGTCAAAGGGTC+GGG | + | Chr5:51579076-51579095 | None:intergenic | 50.0% | |
| CATTGTACGGGTCAAAGGGT+CGG | + | Chr5:51579077-51579096 | None:intergenic | 50.0% | |
| CCAGGCTTGGACAAAGGAAA+AGG | - | Chr5:51578952-51578971 | MsG0580027033.01.T01:CDS | 50.0% | |
| CTAGCCCACGACATTCAAAC+CGG | - | Chr5:51579264-51579283 | MsG0580027033.01.T01:intron | 50.0% | |
| CTTGTGATCACAACCTACGC+CGG | - | Chr5:51579699-51579718 | MsG0580027033.01.T01:intron | 50.0% | |
| GAACAGTTATGTGCCAGGCT+TGG | - | Chr5:51578939-51578958 | MsG0580027033.01.T01:CDS | 50.0% | |
| GAGATTCAGCGTATCGCCAA+TGG | - | Chr5:51577996-51578015 | MsG0580027033.01.T01:CDS | 50.0% | |
| GGGCAGAGAATGGCTTCATT+TGG | + | Chr5:51579111-51579130 | None:intergenic | 50.0% | |
| GGGTCCAATGTGGCAAATCT+TGG | + | Chr5:51580253-51580272 | None:intergenic | 50.0% | |
| GTAGGCCATGTTTGGCATGA+TGG | + | Chr5:51579601-51579620 | None:intergenic | 50.0% | |
| TAGCCCACGACATTCAAACC+GGG | - | Chr5:51579265-51579284 | MsG0580027033.01.T01:intron | 50.0% | |
| TATGTGCCAGGCTTGGACAA+AGG | - | Chr5:51578946-51578965 | MsG0580027033.01.T01:CDS | 50.0% | |
| TCAGAAACAAGGACACCAGG+TGG | - | Chr5:51578997-51579016 | MsG0580027033.01.T01:CDS | 50.0% | |
| TCAGGGCCAACTAGAACTGT+TGG | - | Chr5:51579642-51579661 | MsG0580027033.01.T01:intron | 50.0% | |
| TTCCAACCTCCACCTCAGTA+AGG | + | Chr5:51579668-51579687 | None:intergenic | 50.0% | |
| TTGGCGATACGCTGAATCTC+TGG | + | Chr5:51577996-51578015 | None:intergenic | 50.0% | |
| ! | CCTTTTCCTTTGTCCAAGCC+TGG | + | Chr5:51578955-51578974 | None:intergenic | 50.0% |
| ! | CTGGTCTTCTCCGTGCAATT+AGG | - | Chr5:51579217-51579236 | MsG0580027033.01.T01:intron | 50.0% |
| ! | GTAACTTGTGAGAACTGGGC+GGG | + | Chr5:51579031-51579050 | None:intergenic | 50.0% |
| !! | AACTGTTGGCCTTACTGAGG+TGG | - | Chr5:51579656-51579675 | MsG0580027033.01.T01:intron | 50.0% |
| GAATGAGTCGGGGCAGAGAA+TGG | + | Chr5:51579121-51579140 | None:intergenic | 55.0% | |
| GGTGACATTCTCCGTGTCAC+CGG | - | Chr5:51579741-51579760 | MsG0580027033.01.T01:CDS | 55.0% | |
| GTAACGGTTCAATCCGGCGT+AGG | + | Chr5:51579715-51579734 | None:intergenic | 55.0% | |
| GTGACATTCTCCGTGTCACC+GGG | - | Chr5:51579742-51579761 | MsG0580027033.01.T01:CDS | 55.0% | |
| GTTCGGCCCAATTGAGCTGA+AGG | + | Chr5:51579245-51579264 | None:intergenic | 55.0% | |
| TCACACGCAGGTGGACCTAA+TGG | + | Chr5:51577780-51577799 | None:intergenic | 55.0% | |
| TGCCACATTGGACCCCTGAA+AGG | - | Chr5:51580258-51580277 | MsG0580027033.01.T01:CDS | 55.0% | |
| TGCGTGTGACAAAGACGCCA+AGG | - | Chr5:51577791-51577810 | MsG0580027033.01.T01:CDS | 55.0% | |
| TTGGCGTCTTTGTCACACGC+AGG | + | Chr5:51577792-51577811 | None:intergenic | 55.0% | |
| ! | AGGTCCCGGTTTGAATGTCG+TGG | + | Chr5:51579272-51579291 | None:intergenic | 55.0% |
| ! | CTAGTTGGCCCTGATTCGTG+AGG | + | Chr5:51579636-51579655 | None:intergenic | 55.0% |
| ! | GGTCCCGGTTTGAATGTCGT+GGG | + | Chr5:51579271-51579290 | None:intergenic | 55.0% |
| ! | TTGGCCCTGATTCGTGAGGT+AGG | + | Chr5:51579632-51579651 | None:intergenic | 55.0% |
| !! | GGAGCTTTTGGACTCTAGGG+TGG | - | Chr5:51580211-51580230 | MsG0580027033.01.T01:CDS | 55.0% |
| !! | TGTTGGCCTTACTGAGGTGG+AGG | - | Chr5:51579659-51579678 | MsG0580027033.01.T01:intron | 55.0% |
| AGCAGACTCCCCGAGTCATG+AGG | - | Chr5:51579983-51580002 | MsG0580027033.01.T01:CDS | 60.0% | |
| GCAGACACGGAGACCATACC+AGG | - | Chr5:51579927-51579946 | MsG0580027033.01.T01:intron | 60.0% | |
| GCGTCTTTGTCACACGCAGG+TGG | + | Chr5:51577789-51577808 | None:intergenic | 60.0% | |
| GGCCTTACTGAGGTGGAGGT+TGG | - | Chr5:51579663-51579682 | MsG0580027033.01.T01:intron | 60.0% | |
| CAGAGGCAAAGACAGCGCCG+AGG | + | Chr5:51579200-51579219 | None:intergenic | 65.0% | |
| CGCAACCAAGTCCTCCGCCT+CGG | - | Chr5:51579180-51579199 | MsG0580027033.01.T01:intron | 65.0% | |
| CTCGGCGCTGTCTTTGCCTC+TGG | - | Chr5:51579198-51579217 | MsG0580027033.01.T01:intron | 65.0% | |
| GGGCGGGCCAATAAACCACC+TGG | + | Chr5:51579015-51579034 | None:intergenic | 65.0% | |
| ! | AGGCAAAGACAGCGCCGAGG+CGG | + | Chr5:51579197-51579216 | None:intergenic | 65.0% |
| ! | CAAAGACAGCGCCGAGGCGG+AGG | + | Chr5:51579194-51579213 | None:intergenic | 70.0% |
| ! | CAGCGCCGAGGCGGAGGACT+TGG | + | Chr5:51579188-51579207 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 51577750 | 51580289 | 51577750 | ID=MsG0580027033.01;Name=MsG0580027033.01 |
| Chr5 | mRNA | 51577750 | 51580289 | 51577750 | ID=MsG0580027033.01.T01;Parent=MsG0580027033.01;Name=MsG0580027033.01.T01;_AED=0.22;_eAED=0.24;_QI=0|0|0|1|1|1|3|0|588 |
| Chr5 | exon | 51579970 | 51580289 | 51579970 | ID=MsG0580027033.01.T01:exon:29039;Parent=MsG0580027033.01.T01 |
| Chr5 | exon | 51579711 | 51579812 | 51579711 | ID=MsG0580027033.01.T01:exon:29038;Parent=MsG0580027033.01.T01 |
| Chr5 | exon | 51577750 | 51579094 | 51577750 | ID=MsG0580027033.01.T01:exon:29037;Parent=MsG0580027033.01.T01 |
| Chr5 | CDS | 51579970 | 51580289 | 51579970 | ID=MsG0580027033.01.T01:cds;Parent=MsG0580027033.01.T01 |
| Chr5 | CDS | 51579711 | 51579812 | 51579711 | ID=MsG0580027033.01.T01:cds;Parent=MsG0580027033.01.T01 |
| Chr5 | CDS | 51577750 | 51579094 | 51577750 | ID=MsG0580027033.01.T01:cds;Parent=MsG0580027033.01.T01 |
| Gene Sequence |
| Protein sequence |
