AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043647.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043647.01.T01 MTR_8g038880 96.154 572 22 0 1 572 1 572 0.0 1095
MsG0880043647.01.T01 MTR_3g014790 66.243 551 181 3 15 563 13 560 0.0 726
MsG0880043647.01.T01 MTR_0294s0020 48.435 543 246 8 19 550 30 549 2.35e-175 508
MsG0880043647.01.T01 MTR_3g005010 47.689 541 250 7 19 551 29 544 8.70e-175 506
MsG0880043647.01.T01 MTR_4g033315 48.066 543 250 8 19 550 30 551 3.21e-173 502
MsG0880043647.01.T01 MTR_4g033310 48.066 543 250 8 19 550 30 551 3.21e-173 502
MsG0880043647.01.T01 MTR_4g033325 48.066 543 248 6 19 550 30 549 1.60e-171 498
MsG0880043647.01.T01 MTR_4g033330 49.046 524 235 7 20 532 31 533 1.22e-166 484
MsG0880043647.01.T01 MTR_3g069420 43.750 560 287 7 22 566 36 582 3.01e-165 483
MsG0880043647.01.T01 MTR_4g033375 49.794 486 214 7 19 494 31 496 4.06e-163 474
MsG0880043647.01.T01 MTR_7g065080 40.411 584 310 6 3 570 17 578 4.44e-163 477
MsG0880043647.01.T01 MTR_3g069500 42.419 554 282 7 20 556 35 568 3.33e-161 472
MsG0880043647.01.T01 MTR_4g019580 40.949 569 294 7 22 564 38 590 3.76e-160 470
MsG0880043647.01.T01 MTR_4g033395 50.000 486 213 6 19 494 31 496 1.16e-159 465
MsG0880043647.01.T01 MTR_7g067010 42.572 552 292 6 20 555 24 566 2.36e-158 464
MsG0880043647.01.T01 MTR_3g069440 43.141 554 288 6 20 556 33 576 2.25e-157 463
MsG0880043647.01.T01 MTR_3g462710 44.107 560 278 9 20 557 24 570 4.18e-155 456
MsG0880043647.01.T01 MTR_4g015080 41.410 553 291 6 20 552 34 573 2.85e-146 434
MsG0880043647.01.T01 MTR_3g072300 42.468 551 288 8 19 551 23 562 4.39e-145 431
MsG0880043647.01.T01 MTR_4g033325 45.957 470 228 5 84 550 5 451 2.32e-142 420
MsG0880043647.01.T01 MTR_4g033325 47.285 442 207 5 112 550 7 425 7.16e-142 417
MsG0880043647.01.T01 MTR_7g098180 39.726 584 298 9 19 567 30 594 7.69e-142 424
MsG0880043647.01.T01 MTR_7g098200 40.395 557 288 7 19 549 28 566 1.55e-141 423
MsG0880043647.01.T01 MTR_7g065080 40.079 509 270 5 78 570 2 491 2.52e-141 419
MsG0880043647.01.T01 MTR_7g098200 40.687 553 282 7 19 549 28 556 2.63e-141 422
MsG0880043647.01.T01 MTR_4g033385 48.037 433 202 6 121 550 40 452 7.49e-140 413
MsG0880043647.01.T01 MTR_7g098040 40.036 557 290 8 19 549 33 571 1.27e-139 418
MsG0880043647.01.T01 MTR_7g098230 38.743 573 313 7 2 550 6 564 4.77e-138 414
MsG0880043647.01.T01 MTR_1g075440 40.642 561 293 7 19 555 27 571 3.75e-137 411
MsG0880043647.01.T01 MTR_7g098160 39.024 574 303 8 19 566 32 584 1.88e-136 410
MsG0880043647.01.T01 MTR_7g098090 39.478 575 297 9 19 561 32 587 5.16e-135 406
MsG0880043647.01.T01 MTR_7g098220 39.828 580 305 8 19 572 29 590 7.12e-132 398
MsG0880043647.01.T01 MTR_1g042310 38.172 558 311 6 19 555 25 569 6.45e-130 392
MsG0880043647.01.T01 MTR_3g112470 38.519 540 297 6 22 544 25 546 1.01e-129 391
MsG0880043647.01.T01 MTR_3g112450 39.455 550 294 9 22 551 25 555 1.08e-128 389
MsG0880043647.01.T01 MTR_5g012270 38.163 566 315 7 19 562 28 580 5.41e-128 387
MsG0880043647.01.T01 MTR_7g098220 39.858 562 294 8 37 572 3 546 6.21e-128 386
MsG0880043647.01.T01 MTR_3g462710 45.351 441 222 6 123 557 34 461 2.64e-127 381
MsG0880043647.01.T01 MTR_5g055000 36.602 571 326 7 20 566 18 576 4.32e-127 385
MsG0880043647.01.T01 MTR_3g112460 37.778 540 301 6 22 544 25 546 5.22e-127 384
MsG0880043647.01.T01 MTR_1g042310 38.262 541 300 6 37 556 6 533 3.92e-126 382
MsG0880043647.01.T01 MTR_1g041835 39.247 558 304 6 19 555 26 569 7.34e-126 382
MsG0880043647.01.T01 MTR_1g042310 38.104 538 299 6 40 556 2 526 2.34e-124 377
MsG0880043647.01.T01 MTR_1g041815 39.068 558 305 6 19 555 26 569 2.39e-124 378
MsG0880043647.01.T01 MTR_1g041875 38.278 546 289 8 9 531 21 541 4.07e-124 377
MsG0880043647.01.T01 MTR_7g088825 36.833 562 326 7 20 560 22 575 1.34e-123 377
MsG0880043647.01.T01 MTR_7g088820 37.037 567 320 9 20 561 25 579 5.14e-123 375
MsG0880043647.01.T01 MTR_7g088790 36.192 583 339 8 1 561 13 584 3.12e-120 368
MsG0880043647.01.T01 MTR_4g101380 38.732 568 312 9 19 562 26 581 2.62e-119 365
MsG0880043647.01.T01 MTR_5g012290 36.861 567 325 8 16 562 25 578 5.66e-119 364
MsG0880043647.01.T01 MTR_1g041885 38.058 515 278 7 40 533 2 496 7.76e-117 357
MsG0880043647.01.T01 MTR_7g010820 36.364 572 319 8 20 560 26 583 3.42e-116 357
MsG0880043647.01.T01 MTR_6g008690 36.445 557 300 14 25 555 12 540 3.63e-115 353
MsG0880043647.01.T01 MTR_7g098200 41.014 434 233 5 121 549 37 452 4.77e-115 351
MsG0880043647.01.T01 MTR_7g088820 36.553 528 298 9 59 561 2 517 4.04e-112 345
MsG0880043647.01.T01 MTR_4g098800 34.452 566 332 8 22 563 38 588 6.50e-112 346
MsG0880043647.01.T01 MTR_4g098800 34.452 566 332 8 22 563 103 653 4.67e-111 346
MsG0880043647.01.T01 MTR_7g005930 33.865 564 335 9 20 563 35 580 1.12e-110 343
MsG0880043647.01.T01 MTR_7g006540 34.991 583 329 10 19 564 62 631 2.70e-110 343
MsG0880043647.01.T01 MTR_5g014150 33.216 566 344 9 20 561 44 599 2.44e-109 340
MsG0880043647.01.T01 MTR_1g116930 32.384 562 338 8 19 557 22 564 4.75e-108 336
MsG0880043647.01.T01 MTR_5g038060 35.385 585 341 9 1 557 10 585 6.58e-107 333
MsG0880043647.01.T01 MTR_4g107580 32.712 590 358 9 1 564 8 584 2.05e-105 330
MsG0880043647.01.T01 MTR_4g107530 32.699 578 343 8 23 564 36 603 2.60e-105 329
MsG0880043647.01.T01 MTR_7g098150 39.775 445 224 6 19 437 32 458 1.29e-103 321
MsG0880043647.01.T01 MTR_7g064780 32.986 576 344 11 15 561 19 581 3.20e-103 323
MsG0880043647.01.T01 MTR_7g013270 34.403 561 328 9 20 558 90 632 3.40e-103 325
MsG0880043647.01.T01 MTR_4g107670 34.276 566 324 12 15 550 24 571 5.61e-102 320
MsG0880043647.01.T01 MTR_7g088820 37.723 448 262 7 120 561 33 469 1.68e-101 316
MsG0880043647.01.T01 MTR_4g107510 32.432 555 341 8 23 551 39 585 2.58e-101 319
MsG0880043647.01.T01 MTR_8g087780 34.225 561 332 8 20 550 21 574 5.76e-101 318
MsG0880043647.01.T01 MTR_2g017750 32.292 576 348 9 20 560 34 602 4.19e-100 316
MsG0880043647.01.T01 MTR_3g100980 34.336 565 319 10 20 556 16 556 1.81e-99 313
MsG0880043647.01.T01 MTR_5g038190 33.452 562 326 8 20 550 24 568 1.85e-99 313
MsG0880043647.01.T01 MTR_4g123537 34.116 554 324 12 17 550 38 570 7.44e-98 310
MsG0880043647.01.T01 MTR_5g085850 34.507 568 314 10 19 559 29 565 1.82e-96 306
MsG0880043647.01.T01 MTR_8g469470 32.343 572 345 9 9 551 24 582 2.31e-96 305
MsG0880043647.01.T01 MTR_8g087810 33.688 564 332 10 20 550 21 575 1.13e-95 304
MsG0880043647.01.T01 MTR_8g469310 32.504 563 331 8 20 550 26 571 1.23e-95 303
MsG0880043647.01.T01 MTR_5g038380 31.972 563 335 9 20 550 28 574 2.32e-95 303
MsG0880043647.01.T01 MTR_4g033310 46.708 319 148 6 233 550 190 487 5.95e-95 299
MsG0880043647.01.T01 MTR_4g033310 53.988 163 67 1 19 173 30 192 1.38e-45 168
MsG0880043647.01.T01 MTR_2g005130 32.971 552 317 9 22 550 42 563 1.42e-94 301
MsG0880043647.01.T01 MTR_7g064800 30.399 602 376 9 2 572 5 594 5.57e-94 300
MsG0880043647.01.T01 MTR_8g103233 32.095 592 349 12 9 567 6 577 5.99e-94 299
MsG0880043647.01.T01 MTR_3g100980 33.162 582 331 11 20 556 16 584 6.60e-94 300
MsG0880043647.01.T01 MTR_8g469480 32.982 570 337 9 23 561 41 596 2.18e-93 298
MsG0880043647.01.T01 MTR_1g009200 31.746 567 343 8 20 560 27 575 8.87e-93 296
MsG0880043647.01.T01 MTR_1g085090 29.281 584 371 10 1 565 1 561 5.61e-92 295
MsG0880043647.01.T01 MTR_4g114340 34.155 568 333 11 19 563 23 572 6.94e-92 293
MsG0880043647.01.T01 MTR_7g111260 31.076 576 353 10 1 556 1 552 2.49e-90 290
MsG0880043647.01.T01 MTR_4g107610 33.151 549 322 10 17 537 28 559 5.45e-90 290
MsG0880043647.01.T01 MTR_2g101650 31.497 581 349 12 11 561 14 575 1.71e-88 285
MsG0880043647.01.T01 MTR_4g011280 30.619 565 344 9 6 541 18 563 6.72e-83 271
MsG0880043647.01.T01 MTR_2g101640 31.934 548 335 8 15 537 18 552 2.49e-82 270
MsG0880043647.01.T01 MTR_2g093640 31.065 573 343 12 3 552 6 549 4.69e-81 265
MsG0880043647.01.T01 MTR_2g101610 32.299 548 329 9 21 541 28 560 6.03e-81 266
MsG0880043647.01.T01 MTR_2g101590 32.550 553 323 11 20 541 26 559 7.58e-81 266
MsG0880043647.01.T01 MTR_1g057460 31.512 549 335 12 10 541 34 558 5.76e-79 259
MsG0880043647.01.T01 MTR_7g098210 32.468 539 238 13 40 550 2 442 3.43e-78 254
MsG0880043647.01.T01 MTR_1g057460 32.848 481 282 12 78 541 31 487 3.68e-76 250
MsG0880043647.01.T01 MTR_1g026770 29.422 571 360 13 18 563 13 565 6.51e-76 251
MsG0880043647.01.T01 MTR_0236s0050 32.582 488 290 10 70 541 23 487 3.03e-75 248
MsG0880043647.01.T01 MTR_2g101560 30.345 580 343 9 21 561 28 585 3.24e-75 251
MsG0880043647.01.T01 MTR_1g026740 27.193 570 368 9 6 547 3 553 5.33e-75 249
MsG0880043647.01.T01 MTR_1g026750 28.142 565 363 12 21 560 19 565 2.54e-70 236
MsG0880043647.01.T01 MTR_2g093160 29.463 577 347 14 3 552 6 549 4.01e-70 236
MsG0880043647.01.T01 MTR_2g093180 29.319 573 354 10 3 552 6 550 1.15e-69 234
MsG0880043647.01.T01 MTR_4g024930 27.273 572 319 13 20 548 36 553 4.29e-62 214
MsG0880043647.01.T01 MTR_7g052600 26.160 539 345 9 20 545 25 523 2.82e-57 201
MsG0880043647.01.T01 MTR_7g051830 27.223 551 324 14 20 545 25 523 2.08e-56 198
MsG0880043647.01.T01 MTR_7g051880 26.691 547 332 12 20 545 25 523 1.21e-55 196
MsG0880043647.01.T01 MTR_1g009170 28.222 450 236 10 128 568 9 380 9.60e-53 185
MsG0880043647.01.T01 MTR_3g065350 37.267 161 93 3 318 478 1 153 3.82e-27 108
MsG0880043647.01.T01 MTR_4g033390 47.312 93 46 2 467 556 31 123 1.93e-22 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043647.01.T01 AT3G54450 55.735 558 238 6 8 561 2 554 0.0 653
MsG0880043647.01.T01 AT1G72125 44.846 553 260 6 22 553 31 559 2.91e-162 474
MsG0880043647.01.T01 AT1G22540 45.570 553 257 9 19 553 29 555 1.88e-160 469
MsG0880043647.01.T01 AT3G53960 42.234 573 288 10 3 552 23 575 7.67e-160 470
MsG0880043647.01.T01 AT1G72120 44.765 554 261 9 19 553 28 555 2.71e-159 467
MsG0880043647.01.T01 AT2G37900 41.935 558 280 9 20 556 38 572 4.48e-156 459
MsG0880043647.01.T01 AT3G54140 42.495 553 291 6 20 554 24 567 3.70e-152 449
MsG0880043647.01.T01 AT3G54140 42.495 553 291 6 20 554 24 567 3.70e-152 449
MsG0880043647.01.T01 AT5G01180 41.727 556 290 8 20 554 25 567 2.77e-151 447
MsG0880043647.01.T01 AT5G01180 41.727 556 290 8 20 554 25 567 2.77e-151 447
MsG0880043647.01.T01 AT5G01180 41.727 556 290 8 20 554 25 567 2.77e-151 447
MsG0880043647.01.T01 AT1G22550 41.869 578 285 7 1 553 11 562 2.35e-150 444
MsG0880043647.01.T01 AT1G72140 42.576 559 257 8 19 551 33 553 2.17e-147 436
MsG0880043647.01.T01 AT1G72130 42.308 546 267 8 21 553 26 536 1.99e-144 428
MsG0880043647.01.T01 AT1G22570 41.003 578 291 6 1 553 11 563 4.48e-144 428
MsG0880043647.01.T01 AT2G02040 41.441 555 289 9 20 551 41 582 4.52e-142 424
MsG0880043647.01.T01 AT1G22570 41.575 546 269 6 33 553 6 526 1.92e-139 415
MsG0880043647.01.T01 AT2G37900 41.165 515 259 9 63 556 2 493 4.72e-139 413
MsG0880043647.01.T01 AT1G62200 39.856 557 294 8 17 551 49 586 7.48e-138 413
MsG0880043647.01.T01 AT2G40460 42.086 556 281 10 19 553 23 558 1.73e-135 407
MsG0880043647.01.T01 AT5G46040 39.254 563 308 5 19 561 26 574 1.68e-133 402
MsG0880043647.01.T01 AT5G46050 40.075 534 279 5 21 530 28 544 2.59e-133 401
MsG0880043647.01.T01 AT1G62200 38.554 581 297 9 17 551 49 615 1.25e-132 400
MsG0880043647.01.T01 AT1G62200 38.554 581 297 9 17 551 63 629 1.97e-132 400
MsG0880043647.01.T01 AT2G02020 38.069 549 275 7 22 552 44 545 1.46e-126 382
MsG0880043647.01.T01 AT1G68570 39.640 555 306 7 21 553 24 571 1.65e-125 381
MsG0880043647.01.T01 AT1G68570 39.668 542 298 7 34 553 7 541 5.12e-124 377
MsG0880043647.01.T01 AT5G14940 35.943 562 314 12 20 556 7 547 2.00e-116 357
MsG0880043647.01.T01 AT3G01350 36.092 568 319 10 21 559 8 560 2.91e-115 354
MsG0880043647.01.T01 AT5G13400 35.106 564 331 8 19 556 63 617 8.29e-113 349
MsG0880043647.01.T01 AT1G72130 40.411 438 222 7 118 551 14 416 4.27e-112 341
MsG0880043647.01.T01 AT1G72130 40.411 438 222 7 118 551 14 416 4.27e-112 341
MsG0880043647.01.T01 AT1G32450 33.972 574 345 10 19 566 36 601 6.21e-112 347
MsG0880043647.01.T01 AT1G69870 35.018 554 327 6 20 550 51 594 2.28e-109 340
MsG0880043647.01.T01 AT1G12110 36.462 554 322 8 19 551 26 570 3.31e-109 339
MsG0880043647.01.T01 AT5G46050 40.674 445 243 4 121 561 36 463 4.47e-108 332
MsG0880043647.01.T01 AT2G26690 35.501 569 322 11 19 562 23 571 6.52e-104 325
MsG0880043647.01.T01 AT1G59740 34.353 556 313 9 19 545 40 572 9.67e-104 325
MsG0880043647.01.T01 AT1G18880 33.568 569 339 6 23 563 22 579 3.16e-103 323
MsG0880043647.01.T01 AT4G21680 33.571 560 333 9 22 554 30 577 1.44e-102 322
MsG0880043647.01.T01 AT5G19640 32.862 566 329 11 21 564 60 596 1.25e-100 317
MsG0880043647.01.T01 AT2G26690 35.315 555 314 11 33 562 4 538 5.93e-100 313
MsG0880043647.01.T01 AT1G69850 34.452 566 325 10 20 550 25 579 3.29e-98 310
MsG0880043647.01.T01 AT1G52190 32.639 576 337 10 1 541 1 560 1.55e-97 309
MsG0880043647.01.T01 AT2G26690 35.413 545 307 11 43 562 2 526 2.86e-97 306
MsG0880043647.01.T01 AT1G27040 35.572 551 317 9 20 549 27 560 4.61e-97 307
MsG0880043647.01.T01 AT1G27040 35.572 551 317 9 20 549 23 556 5.69e-97 306
MsG0880043647.01.T01 AT1G33440 35.262 553 302 13 19 542 37 562 6.54e-96 305
MsG0880043647.01.T01 AT3G16180 32.558 602 349 10 1 561 1 586 1.42e-94 301
MsG0880043647.01.T01 AT1G27040 35.502 538 309 9 33 549 8 528 3.80e-94 298
MsG0880043647.01.T01 AT3G21670 35.116 561 305 13 19 550 28 558 6.37e-94 299
MsG0880043647.01.T01 AT5G62680 31.699 571 344 11 23 561 46 602 2.31e-89 288
MsG0880043647.01.T01 AT1G27080 31.699 571 340 10 20 563 14 561 1.97e-88 285
MsG0880043647.01.T01 AT5G62730 33.031 551 336 12 20 554 56 589 3.87e-88 284
MsG0880043647.01.T01 AT5G62730 33.028 545 332 12 26 554 3 530 5.01e-87 280
MsG0880043647.01.T01 AT5G28470 31.429 560 339 11 2 537 5 543 7.27e-87 280
MsG0880043647.01.T01 AT3G47960 29.821 560 358 7 23 556 64 614 1.36e-85 279
MsG0880043647.01.T01 AT5G28470 31.250 560 338 12 2 537 5 541 6.61e-84 272
MsG0880043647.01.T01 AT1G69860 30.245 572 356 8 7 556 5 555 1.48e-82 268
MsG0880043647.01.T01 AT1G27080 31.481 540 320 10 51 563 3 519 1.48e-81 265
MsG0880043647.01.T01 AT3G45660 31.239 573 328 14 17 559 18 554 1.27e-80 263
MsG0880043647.01.T01 AT3G45660 31.239 573 328 14 17 559 18 554 1.27e-80 263
MsG0880043647.01.T01 AT3G45660 31.239 573 328 14 17 559 39 575 2.44e-80 263
MsG0880043647.01.T01 AT3G45650 30.465 581 347 13 1 556 1 549 2.90e-79 260
MsG0880043647.01.T01 AT3G45720 29.913 575 330 12 19 561 18 551 4.36e-76 251
MsG0880043647.01.T01 AT3G45680 28.014 589 366 12 1 564 1 556 2.43e-75 249
MsG0880043647.01.T01 AT3G25260 30.074 542 314 10 20 545 21 513 5.07e-75 248
MsG0880043647.01.T01 AT3G45700 28.522 575 355 11 1 556 1 538 2.07e-74 247
MsG0880043647.01.T01 AT3G45650 29.160 607 347 14 1 556 1 575 1.27e-73 246
MsG0880043647.01.T01 AT3G45710 27.179 585 370 11 1 560 1 554 3.22e-73 244
MsG0880043647.01.T01 AT3G25280 28.571 539 332 9 20 545 21 519 1.56e-68 231
MsG0880043647.01.T01 AT3G45690 26.372 565 325 12 18 561 16 510 9.23e-63 215
MsG0880043647.01.T01 AT2G38100 29.002 531 324 15 48 561 2 496 6.18e-57 199
MsG0880043647.01.T01 AT2G38100 29.002 531 324 15 48 561 24 518 1.35e-56 199
MsG0880043647.01.T01 AT2G38100 29.002 531 324 15 48 561 18 512 1.51e-56 199
MsG0880043647.01.T01 AT2G02020 35.739 291 170 1 22 295 44 334 1.30e-51 185
MsG0880043647.01.T01 AT2G02020 39.726 219 127 4 335 552 310 524 3.80e-46 170
MsG0880043647.01.T01 AT5G11570 26.032 557 308 14 11 547 4 476 1.68e-45 167

Find 144 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGTACTATGTTTGGATTT+TGG 0.145938 8:-28379833 None:intergenic
AATGAGAATCACGATATTTA+AGG 0.198454 8:-28387016 None:intergenic
CACACCTTGATGATTATTAT+TGG 0.205565 8:+28386666 MsG0880043647.01.T01:CDS
GGAGCACTACTACTAGAAAT+TGG 0.214442 8:-28379792 None:intergenic
TGTGTTAAGTGCTGTTAATT+TGG 0.220123 8:+28386697 MsG0880043647.01.T01:CDS
CCATCACTCCACAACCAAAA+AGG 0.253088 8:+28380019 MsG0880043647.01.T01:CDS
CAATACTACCGATGTATATT+TGG 0.262174 8:+28386414 MsG0880043647.01.T01:CDS
GGCATTGGCACTCTTCCTAT+TGG 0.263753 8:+28384826 MsG0880043647.01.T01:CDS
AGGATGTTTGGGTCTTATAT+AGG 0.278963 8:-28379866 None:intergenic
TGCAACACGGTTATCCCATT+TGG 0.279245 8:-28386278 None:intergenic
GTCTTATATAGGGAAAATTA+TGG 0.289839 8:-28379855 None:intergenic
TGGAGCAAAGTATGATATTT+AGG 0.291619 8:-28385019 None:intergenic
GTTGGGTGGGGTGTGGGGTT+AGG 0.297522 8:+28384779 MsG0880043647.01.T01:CDS
ACTTGGGCCAGTCTTGTAAA+TGG 0.307105 8:-28384887 None:intergenic
GGACAATGTTGGGTGGGGTG+TGG 0.309070 8:+28384772 MsG0880043647.01.T01:intron
GACAATGTTGGGTGGGGTGT+GGG 0.321840 8:+28384773 MsG0880043647.01.T01:CDS
TTCATAGCTGATTCATATCT+TGG 0.330954 8:+28380388 MsG0880043647.01.T01:CDS
GTGTTAAGTGCTGTTAATTT+GGG 0.332355 8:+28386698 MsG0880043647.01.T01:CDS
CTCTTAGCATCCTTCTCTTC+CGG 0.334697 8:-28382981 None:intergenic
ACGAAGACTCGGTCGTATAT+TGG 0.344839 8:-28386227 None:intergenic
AAGTTTGAACACAAGGCTTA+TGG 0.351768 8:-28382929 None:intergenic
ACACCTTGATGATTATTATT+GGG 0.352520 8:+28386667 MsG0880043647.01.T01:CDS
GATTAATGTGCCACCTTGTT+TGG 0.353072 8:-28386126 None:intergenic
GGATGTTTGGGTCTTATATA+GGG 0.358242 8:-28379865 None:intergenic
TGATGATTATTATTGGGTTA+TGG 0.358619 8:+28386673 MsG0880043647.01.T01:CDS
TAAGAACATGATTGTTACTT+TGG 0.360556 8:+28386963 MsG0880043647.01.T01:three_prime_UTR
GGTTGGGAGATAACATCAAT+AGG 0.363887 8:+28386642 MsG0880043647.01.T01:CDS
CCCACCTATATTGATTTGTA+TGG 0.364822 8:-28385039 None:intergenic
GCATTGGCACTCTTCCTATT+GGG 0.365353 8:+28384827 MsG0880043647.01.T01:CDS
TCCTCACTATTCCCTTTGCT+TGG 0.365982 8:+28380361 MsG0880043647.01.T01:CDS
GCCGGACGGACTGAGAAGTT+TGG 0.368505 8:+28386520 MsG0880043647.01.T01:CDS
GAACTTACATATGATGAATA+TGG 0.368623 8:-28380057 None:intergenic
AATTATGGGAGTACTATGTT+TGG 0.371072 8:-28379840 None:intergenic
TTGGGCTATCTGCCATGATT+TGG 0.371956 8:-28379971 None:intergenic
ACAATGTTGGGTGGGGTGTG+GGG 0.374470 8:+28384774 MsG0880043647.01.T01:CDS
GCAACACGGTTATCCCATTT+GGG 0.378471 8:-28386277 None:intergenic
AGAAGTAACCAAGAGGGTTC+TGG 0.380275 8:+28386776 MsG0880043647.01.T01:CDS
GAGCACTACTACTAGAAATT+GGG 0.382033 8:-28379791 None:intergenic
TAGTTTACCTGAAGATATAC+TGG 0.387756 8:-28383065 None:intergenic
TGGTACTTGGGCATTGTGGC+TGG 0.394291 8:+28383020 MsG0880043647.01.T01:CDS
TATACTCACAATGGTTGTTT+CGG 0.398118 8:+28386328 MsG0880043647.01.T01:CDS
CATCTTTCTCCTCTTCACTA+TGG 0.400638 8:-28384973 None:intergenic
TTCCCTCCAGCATCACTTCA+AGG 0.400965 8:+28386173 MsG0880043647.01.T01:CDS
GTCTTCACTCATTTATCTTG+TGG 0.402311 8:+28380432 MsG0880043647.01.T01:CDS
ATTAAACAAGTTAGCCATAC+AGG 0.402683 8:-28386065 None:intergenic
GGGTGTGGGGTTAGGAGTAT+TGG 0.406293 8:+28384787 MsG0880043647.01.T01:CDS
TACAGAAAGGAAAGCCCTAC+AGG 0.407761 8:+28384860 MsG0880043647.01.T01:CDS
CGGCTCTTGTAGAAACGAAA+AGG 0.407993 8:+28386348 MsG0880043647.01.T01:CDS
CCGGACGGACTGAGAAGTTT+GGG 0.413910 8:+28386521 MsG0880043647.01.T01:CDS
GGCTATCTGCCATGATTTGG+TGG 0.414389 8:-28379968 None:intergenic
TCACTATTCCCTTTGCTTGG+TGG 0.418464 8:+28380364 MsG0880043647.01.T01:CDS
AATTATAGTAGCATTATCTA+TGG 0.422696 8:-28386854 None:intergenic
AAATTCACCGGTCACCCAAA+TGG 0.425786 8:+28386263 MsG0880043647.01.T01:CDS
AATGAGTGAAGACAAGAGTA+TGG 0.428043 8:-28380422 None:intergenic
GAGATTTGCATACCAAGGTT+TGG 0.431626 8:+28380252 MsG0880043647.01.T01:CDS
TGGGGTGTGGGGATGAGAAA+AGG 0.434894 8:-28379813 None:intergenic
TATATAAGTATAGTAGGAGT+TGG 0.438611 8:+28386554 MsG0880043647.01.T01:CDS
TCTGATGCGTTTACTATCGT+TGG 0.439738 8:+28386470 MsG0880043647.01.T01:CDS
GCACTTTATGTGCTTTCCAT+TGG 0.444806 8:+28382897 MsG0880043647.01.T01:CDS
TTAATTTGGGTGTTTATATG+TGG 0.449648 8:+28386711 MsG0880043647.01.T01:CDS
AGGAGTGTTGGCATTGGCAT+TGG 0.457677 8:+28384811 MsG0880043647.01.T01:CDS
GGCTACAATAGATATCGTTC+TGG 0.462037 8:+28386797 MsG0880043647.01.T01:CDS
TGCTCCATACAAATCAATAT+AGG 0.469329 8:+28385035 MsG0880043647.01.T01:CDS
GTTTATACCAGTATATCTTC+AGG 0.469782 8:+28383058 MsG0880043647.01.T01:CDS
AATTCACCGGTCACCCAAAT+GGG 0.480800 8:+28386264 MsG0880043647.01.T01:CDS
TTGTCGCCGCAGCTCGCAAG+TGG 0.488259 8:+28384912 MsG0880043647.01.T01:CDS
GGTTATCCCATTTGGGTGAC+CGG 0.488655 8:-28386270 None:intergenic
TAGCAAGTGGCACGAAGACT+CGG 0.490850 8:-28386238 None:intergenic
GCGGCGTATATAAGTATAGT+AGG 0.493249 8:+28386548 MsG0880043647.01.T01:CDS
GGCTCTTGTAGAAACGAAAA+GGG 0.495860 8:+28386349 MsG0880043647.01.T01:CDS
GGTTGTGGAGTGATGGATGA+GGG 0.501318 8:-28380012 None:intergenic
TATTGTAGCCAGAACCCTCT+TGG 0.501499 8:-28386784 None:intergenic
ACGAGGCCTTGAAGTGATGC+TGG 0.507942 8:-28386179 None:intergenic
AGGAGTATTGGCAGGAGTGT+TGG 0.511573 8:+28384799 MsG0880043647.01.T01:CDS
TCTTATATAGGGAAAATTAT+GGG 0.512640 8:-28379854 None:intergenic
CGTGTCGTCGTCGAACTGAT+CGG 0.522709 8:-28382958 None:intergenic
CACGCGCCACTTGCGAGCTG+CGG 0.524318 8:-28384918 None:intergenic
CTTGTAAATGGACTCCCTGT+AGG 0.524715 8:-28384875 None:intergenic
CGTATATTGGAACAACGAAA+AGG 0.524827 8:-28386214 None:intergenic
CAAAACTCACCACCAAATCA+TGG 0.526335 8:+28379959 MsG0880043647.01.T01:exon
CATTATAATTGAAGTTGTTG+AGG 0.528014 8:+28386592 MsG0880043647.01.T01:CDS
TGGTTGTGGAGTGATGGATG+AGG 0.528098 8:-28380013 None:intergenic
TCTTCCTATTGGGAATCAAA+AGG 0.529313 8:+28384837 MsG0880043647.01.T01:CDS
GTGCAAAAGCTGGTGAGAAA+TGG 0.533099 8:+28386621 MsG0880043647.01.T01:CDS
TACTACCGATGTATATTTGG+TGG 0.535981 8:+28386417 MsG0880043647.01.T01:CDS
CCCAAACTTCTCAGTCCGTC+CGG 0.536644 8:-28386521 None:intergenic
CGACGACACGCCGGAAGAGA+AGG 0.536664 8:+28382971 MsG0880043647.01.T01:CDS
TTCTTCGTCTAATCCCTGTA+TGG 0.537187 8:+28386051 MsG0880043647.01.T01:CDS
TAACCCAATAATAATCATCA+AGG 0.540319 8:-28386670 None:intergenic
CTATGAAGCCACCAAGCAAA+GGG 0.542359 8:-28380372 None:intergenic
TTTCTTGACACTTTCAGTGT+CGG 0.543156 8:+28382845 MsG0880043647.01.T01:CDS
AGTAGCATTATCTATGGCAA+AGG 0.544789 8:-28386848 None:intergenic
ATAACCGTGTTGCAAAGAAT+CGG 0.549285 8:+28386287 MsG0880043647.01.T01:CDS
GTGCTTTCCATTGGTGAAGG+AGG 0.549336 8:+28382906 MsG0880043647.01.T01:CDS
TTGTAAATGGACTCCCTGTA+GGG 0.551151 8:-28384874 None:intergenic
AGGGAGTCCATTTACAAGAC+TGG 0.553305 8:+28384880 MsG0880043647.01.T01:CDS
AATTCAGGACAATGTTGGGT+GGG 0.554992 8:+28384766 MsG0880043647.01.T01:intron
TATGTGCTTTCCATTGGTGA+AGG 0.555245 8:+28382903 MsG0880043647.01.T01:CDS
GTCCAATATGATAGAGGAGA+AGG 0.557514 8:+28379754 None:intergenic
CAAACAAAACAAGAAATCCA+TGG 0.560424 8:+28385988 MsG0880043647.01.T01:CDS
ATTGGCAGGAGTGTTGGCAT+TGG 0.560470 8:+28384805 MsG0880043647.01.T01:CDS
CACACATATTTCACCAAACA+AGG 0.565863 8:+28386113 MsG0880043647.01.T01:CDS
GTTGGGAGATAACATCAATA+GGG 0.567469 8:+28386643 MsG0880043647.01.T01:CDS
TGAGATTTGATGCCAAACCT+TGG 0.567641 8:-28380264 None:intergenic
GTCACTGAACATAATCTCCA+TGG 0.569399 8:-28386005 None:intergenic
AGTAAACGCATCAGAGATGC+CGG 0.575326 8:-28386462 None:intergenic
GCTATGAAGCCACCAAGCAA+AGG 0.578420 8:-28380373 None:intergenic
GGGAATCAAAAGGTACAGAA+AGG 0.580406 8:+28384847 MsG0880043647.01.T01:CDS
CTTCCTCAATATATGATCAC+CGG 0.580732 8:+28386443 MsG0880043647.01.T01:CDS
ATTCAGGACAATGTTGGGTG+GGG 0.582595 8:+28384767 MsG0880043647.01.T01:intron
AGCACTACTACTAGAAATTG+GGG 0.587880 8:-28379790 None:intergenic
GCTGAGAGATTTGCATACCA+AGG 0.590021 8:+28380247 MsG0880043647.01.T01:CDS
TTAAACAAGTTAGCCATACA+GGG 0.590363 8:-28386064 None:intergenic
AAAGCTGGTGAGAAATGGTT+GGG 0.591814 8:+28386626 MsG0880043647.01.T01:CDS
GGCCTTGAAGTGATGCTGGA+GGG 0.597498 8:-28386175 None:intergenic
GTGTTGCAAAGAATCGGAGT+TGG 0.599308 8:+28386293 MsG0880043647.01.T01:CDS
CTTATGGCCTCCTTCACCAA+TGG 0.600332 8:-28382913 None:intergenic
GTGGGGTTAGGAGTATTGGC+AGG 0.603352 8:+28384791 MsG0880043647.01.T01:CDS
ATGCCGGTGATCATATATTG+AGG 0.604323 8:-28386446 None:intergenic
GTTAATGTTGCTAAAAGTCA+CGG 0.605449 8:+28386371 MsG0880043647.01.T01:CDS
AAATTCAGGACAATGTTGGG+TGG 0.606854 8:+28384765 MsG0880043647.01.T01:intron
AACTCCGATTCTTTGCAACA+CGG 0.606929 8:-28386291 None:intergenic
GCGGCGAAAGTTTGAACACA+AGG 0.613912 8:-28382936 None:intergenic
AGGCCTTGAAGTGATGCTGG+AGG 0.615708 8:-28386176 None:intergenic
AAAAGCTGGTGAGAAATGGT+TGG 0.619989 8:+28386625 MsG0880043647.01.T01:CDS
ACTGAGAAGTTTGGGAGCCG+CGG 0.621017 8:+28386529 MsG0880043647.01.T01:CDS
TTCTGGAGTGTAGTAAAACA+AGG 0.625507 8:+28386814 MsG0880043647.01.T01:exon
TTTAGTGATGATAATGTTGG+GGG 0.628840 8:-28379906 None:intergenic
GGTCGAACATGAACATGATG+AGG 0.633947 8:-28384998 None:intergenic
ACAGAAAGGAAAGCCCTACA+GGG 0.634031 8:+28384861 MsG0880043647.01.T01:CDS
CCACTTGCTAGAAAATTCAC+CGG 0.636988 8:+28386251 MsG0880043647.01.T01:CDS
TTGGTGGTACTTGGGCATTG+TGG 0.645431 8:+28383016 MsG0880043647.01.T01:CDS
GTCGTCGTCGAACTGATCGG+CGG 0.646189 8:-28382955 None:intergenic
GAGGCAATTAGTGCAAAAGC+TGG 0.647395 8:+28386611 MsG0880043647.01.T01:CDS
GGCACATTAATCCATACCCT+AGG 0.652827 8:+28386137 MsG0880043647.01.T01:CDS
GATGAAAGAAGTAACCAAGA+GGG 0.661163 8:+28386770 MsG0880043647.01.T01:CDS
GCATCACTTCAAGGCCTCGT+CGG 0.670950 8:+28386182 MsG0880043647.01.T01:CDS
ACCAAGCAAAGGGAATAGTG+AGG 0.678777 8:-28380362 None:intergenic
TCAGTTCGACGACGACACGC+CGG 0.683054 8:+28382962 MsG0880043647.01.T01:CDS
AGTAACCACCAAATATACAT+CGG 0.684698 8:-28386422 None:intergenic
AGATGAAAGAAGTAACCAAG+AGG 0.693348 8:+28386769 MsG0880043647.01.T01:CDS
ACATATTTCACCAAACAAGG+TGG 0.708994 8:+28386116 MsG0880043647.01.T01:CDS
TACTATACTTATATACGCCG+CGG 0.710647 8:-28386546 None:intergenic
AAAGGATCGTGACTCCGACG+AGG 0.738339 8:-28386196 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATATGGTTTAATTA+GGG - Chr8:28382480-28382499 None:intergenic 10.0%
!! AACTATATGATATAATTTAA+AGG - Chr8:28380218-28380237 None:intergenic 10.0%
!! ACTAATATATTAATTAAGTT+GGG - Chr8:28382504-28382523 None:intergenic 10.0%
!! ATAATCGAATTAAATATATA+TGG - Chr8:28385602-28385621 None:intergenic 10.0%
!! TACTAATATATTAATTAAGT+TGG - Chr8:28382505-28382524 None:intergenic 10.0%
!! TAGATAATTAAAGTTATTAA+CGG + Chr8:28381768-28381787 MsG0880043647.01.T01:intron 10.0%
!!! ATAAATAAATAGTTTTGATT+GGG - Chr8:28385458-28385477 None:intergenic 10.0%
!!! TTATTTTATTAGTTGAAATT+TGG - Chr8:28384557-28384576 None:intergenic 10.0%
!! AAAAATATTCTTAATTGAAG+GGG - Chr8:28382391-28382410 None:intergenic 15.0%
!! AAAAATTATTCACATAAAGT+TGG - Chr8:28382592-28382611 None:intergenic 15.0%
!! AAGAAAATATGATATTATGA+TGG - Chr8:28382566-28382585 None:intergenic 15.0%
!! ATGTATGATTCTAATTATAA+TGG + Chr8:28384699-28384718 MsG0880043647.01.T01:intron 15.0%
!! CAAAAATATTCTTAATTGAA+GGG - Chr8:28382392-28382411 None:intergenic 15.0%
!! CAAAGAATTTCTTTATATTA+AGG - Chr8:28383684-28383703 None:intergenic 15.0%
!! CATATAAAAATTTGATGAAT+TGG - Chr8:28385567-28385586 None:intergenic 15.0%
!! CTATACATTAGTTAAAAATA+TGG - Chr8:28381677-28381696 None:intergenic 15.0%
!! GAAAATTATATGGTTTAATT+AGG - Chr8:28382481-28382500 None:intergenic 15.0%
!! GATCAATTATATAATGAAAA+GGG - Chr8:28380096-28380115 None:intergenic 15.0%
!! TAAATTATATCATATAGTTG+TGG + Chr8:28380219-28380238 MsG0880043647.01.T01:intron 15.0%
!! TCAAAAATATTCTTAATTGA+AGG - Chr8:28382393-28382412 None:intergenic 15.0%
!! TGAAATGAATATATTAACAA+AGG - Chr8:28385091-28385110 None:intergenic 15.0%
!! TGATCAATTATATAATGAAA+AGG - Chr8:28380097-28380116 None:intergenic 15.0%
!! TTTCATTATATAATTGATCA+TGG + Chr8:28380097-28380116 MsG0880043647.01.T01:intron 15.0%
!!! AAGTTTTTTACATTTTTTTC+TGG + Chr8:28383998-28384017 MsG0880043647.01.T01:intron 15.0%
!!! ACAAATTAAGTTGTTTATTA+CGG - Chr8:28383718-28383737 None:intergenic 15.0%
!!! CAATTCATCAAATTTTTATA+TGG + Chr8:28385565-28385584 MsG0880043647.01.T01:intron 15.0%
!!! CATAAATAAATAGTTTTGAT+TGG - Chr8:28385459-28385478 None:intergenic 15.0%
!!! CTAATATATTAATTAAGTTG+GGG - Chr8:28382503-28382522 None:intergenic 15.0%
!!! GATTTTTATTTATAAAAGAC+TGG + Chr8:28384228-28384247 MsG0880043647.01.T01:intron 15.0%
!!! TAATTTAAAGTTAGAAAGAA+TGG - Chr8:28385067-28385086 None:intergenic 15.0%
!!! TATTTTTATAAGCTATCTTT+TGG + Chr8:28383818-28383837 MsG0880043647.01.T01:intron 15.0%
!!! TTAATAGGTTAATTTGTTAT+GGG + Chr8:28385753-28385772 MsG0880043647.01.T01:intron 15.0%
!!! TTTAATAGGTTAATTTGTTA+TGG + Chr8:28385752-28385771 MsG0880043647.01.T01:intron 15.0%
!!! TTTATTGATTGTAATTAATG+CGG - Chr8:28381400-28381419 None:intergenic 15.0%
!! AAAGAAAATTGAGGATTATT+AGG + Chr8:28385255-28385274 MsG0880043647.01.T01:intron 20.0%
!! AAAGTAATCAACAAAATGAT+TGG + Chr8:28384172-28384191 MsG0880043647.01.T01:intron 20.0%
!! AATCCTATACAACAATAATA+TGG + Chr8:28380953-28380972 MsG0880043647.01.T01:intron 20.0%
!! AATTATAGTAGCATTATCTA+TGG - Chr8:28386857-28386876 None:intergenic 20.0%
!! ACAATTAAGATAGATATCAT+AGG - Chr8:28381884-28381903 None:intergenic 20.0%
!! AGTCAAACATGATTAAAAAA+TGG - Chr8:28380190-28380209 None:intergenic 20.0%
!! ATGAAGTAGTAGTATTATTT+GGG + Chr8:28381525-28381544 MsG0880043647.01.T01:intron 20.0%
!! ATTGTAAAAGTTAGTGTATA+TGG - Chr8:28383351-28383370 None:intergenic 20.0%
!! ATTGTAAAGTTAGAAAATCA+AGG + Chr8:28381571-28381590 MsG0880043647.01.T01:intron 20.0%
!! GTCAAACATGATTAAAAAAT+GGG - Chr8:28380189-28380208 None:intergenic 20.0%
!! TAATTGGAAAATTATGTGAT+TGG + Chr8:28384476-28384495 MsG0880043647.01.T01:intron 20.0%
!! TAGTTGACCAAAATAAATAA+AGG - Chr8:28382255-28382274 None:intergenic 20.0%
!! TATGAAAATATCTTACGATA+TGG - Chr8:28383906-28383925 None:intergenic 20.0%
!! TATTATTGTTGTATAGGATT+TGG - Chr8:28380953-28380972 None:intergenic 20.0%
!! TCTTATATAGGGAAAATTAT+GGG - Chr8:28379857-28379876 None:intergenic 20.0%
!! TTCCAAATAATTTCAAATCT+AGG + Chr8:28382289-28382308 MsG0880043647.01.T01:intron 20.0%
!! TTGTAAAGTTAGAAAATCAA+GGG + Chr8:28381572-28381591 MsG0880043647.01.T01:intron 20.0%
!! TTTCTAAATCTTTATCTACA+AGG - Chr8:28383622-28383641 None:intergenic 20.0%
!!! AAAGTGTTTTGAGTATAAAA+AGG + Chr8:28386739-28386758 MsG0880043647.01.T01:CDS 20.0%
!!! AATAATTTGCAACAGATTTT+TGG + Chr8:28385932-28385951 MsG0880043647.01.T01:intron 20.0%
!!! AATTTTTTATGATCAAATGC+CGG + Chr8:28386502-28386521 MsG0880043647.01.T01:CDS 20.0%
!!! ATACTAAAAAGCATATTCTT+AGG + Chr8:28385890-28385909 MsG0880043647.01.T01:intron 20.0%
!!! ATCCTAGATTTGAAATTATT+TGG - Chr8:28382294-28382313 None:intergenic 20.0%
!!! ATGTTGTCTTGATATTTTAA+AGG - Chr8:28381325-28381344 None:intergenic 20.0%
!!! ATTGTTGTTTTTGAGTTATA+CGG - Chr8:28381492-28381511 None:intergenic 20.0%
!!! ATTTTTATCTATACTCACAA+TGG + Chr8:28386319-28386338 MsG0880043647.01.T01:CDS 20.0%
!!! GAATCAAATTTTCTTAATTG+TGG + Chr8:28383448-28383467 MsG0880043647.01.T01:intron 20.0%
!!! GAGTTTTATTATAATGAATG+GGG + Chr8:28380896-28380915 MsG0880043647.01.T01:intron 20.0%
!!! GGAGTTTTATTATAATGAAT+GGG + Chr8:28380895-28380914 MsG0880043647.01.T01:intron 20.0%
!!! TAAGAATATGCTTTTTAGTA+TGG - Chr8:28385891-28385910 None:intergenic 20.0%
!!! TACTTTTGAAAAGAAAATTG+AGG + Chr8:28385246-28385265 MsG0880043647.01.T01:intron 20.0%
!!! TATCAGTCACTTTTTTTTTT+TGG + Chr8:28384085-28384104 MsG0880043647.01.T01:intron 20.0%
!!! TATTGACTTATATAATAGAG+AGG + Chr8:28383312-28383331 MsG0880043647.01.T01:intron 20.0%
!!! TCATCAAATTTTTATATGGT+AGG + Chr8:28385569-28385588 MsG0880043647.01.T01:intron 20.0%
!!! TGTTGTCTTGATATTTTAAA+GGG - Chr8:28381324-28381343 None:intergenic 20.0%
!!! TTAAAGGGACAATTATTTTA+AGG - Chr8:28381309-28381328 None:intergenic 20.0%
!!! TTATTGATTGTAATTAATGC+GGG - Chr8:28381399-28381418 None:intergenic 20.0%
!!! TTGATAATTTATACATAGAG+CGG + Chr8:28380570-28380589 MsG0880043647.01.T01:intron 20.0%
!!! TTTGTATCGTTCAATTTTAT+AGG + Chr8:28380739-28380758 MsG0880043647.01.T01:intron 20.0%
!!! TTTTTAATCATGTTTGACTA+TGG + Chr8:28380191-28380210 MsG0880043647.01.T01:intron 20.0%
!!! TTTTTAGTGATGATAATGTT+GGG - Chr8:28379911-28379930 None:intergenic 20.0%
!!! TTTTTTAGTGATGATAATGT+TGG - Chr8:28379912-28379931 None:intergenic 20.0%
! AAAAAATTCAGGACAATGTT+GGG + Chr8:28384762-28384781 MsG0880043647.01.T01:intron 25.0%
! AAAAGTTAGTGTATATGGTA+GGG - Chr8:28383346-28383365 None:intergenic 25.0%
! AAGAGAGAGAAAGAAAATAA+AGG - Chr8:28381009-28381028 None:intergenic 25.0%
! AATGAGGACAAATAATATAC+AGG - Chr8:28382708-28382727 None:intergenic 25.0%
! AGAGAGAGAAAGAAAATAAA+GGG - Chr8:28381008-28381027 None:intergenic 25.0%
! AGGAAAGAATAATAATTGAG+GGG - Chr8:28380152-28380171 None:intergenic 25.0%
! AGTGAAAGACAAGTTATATA+TGG + Chr8:28385333-28385352 MsG0880043647.01.T01:intron 25.0%
! ATACAAACAAGATTAGCATA+AGG - Chr8:28380726-28380745 None:intergenic 25.0%
! ATCAATATTTGATTCTGCAT+TGG - Chr8:28384211-28384230 None:intergenic 25.0%
! ATGTATGTGACAAAAAATTC+AGG + Chr8:28384751-28384770 MsG0880043647.01.T01:intron 25.0%
! CAAATCTTGAAATGGAATAT+TGG - Chr8:28382672-28382691 None:intergenic 25.0%
! CAACCATATTATTGTTGTAT+AGG - Chr8:28380959-28380978 None:intergenic 25.0%
! CATTATAATTGAAGTTGTTG+AGG + Chr8:28386592-28386611 MsG0880043647.01.T01:CDS 25.0%
! GAACTTACATATGATGAATA+TGG - Chr8:28380060-28380079 None:intergenic 25.0%
! GAATTAAATATATATGGCGT+AGG - Chr8:28385596-28385615 None:intergenic 25.0%
! GACAAATAATATACAGGAAT+AGG - Chr8:28382702-28382721 None:intergenic 25.0%
! GAGGAAAGAATAATAATTGA+GGG - Chr8:28380153-28380172 None:intergenic 25.0%
! GAGGTCAAAATTAAGTATAA+AGG - Chr8:28382329-28382348 None:intergenic 25.0%
! GATGAAGTAGTAGTATTATT+TGG + Chr8:28381524-28381543 MsG0880043647.01.T01:intron 25.0%
! GTCTTATATAGGGAAAATTA+TGG - Chr8:28379858-28379877 None:intergenic 25.0%
! TAAAAGTTAGTGTATATGGT+AGG - Chr8:28383347-28383366 None:intergenic 25.0%
! TAAAGAATTTCTGATCAGTT+TGG - Chr8:28383645-28383664 None:intergenic 25.0%
! TAACCCAATAATAATCATCA+AGG - Chr8:28386673-28386692 None:intergenic 25.0%
! TATATAAGTATAGTAGGAGT+TGG + Chr8:28386554-28386573 MsG0880043647.01.T01:CDS 25.0%
! TCACATTATATAGACATTAG+CGG - Chr8:28380620-28380639 None:intergenic 25.0%
! TGATGATTATTATTGGGTTA+TGG + Chr8:28386673-28386692 MsG0880043647.01.T01:CDS 25.0%
! TTAGAGAAAAAACAAGACAA+GGG + Chr8:28383234-28383253 MsG0880043647.01.T01:intron 25.0%
! TTGTATAGGATTTGGATTTA+CGG - Chr8:28380945-28380964 None:intergenic 25.0%
! TTGTTTATTACGGAGTTTAT+TGG - Chr8:28383708-28383727 None:intergenic 25.0%
! TTTAGAGAAAAAACAAGACA+AGG + Chr8:28383233-28383252 MsG0880043647.01.T01:intron 25.0%
! TTTGAGTATAAAAAGGTAGA+TGG + Chr8:28386746-28386765 MsG0880043647.01.T01:CDS 25.0%
!! ACACCTTGATGATTATTATT+GGG + Chr8:28386667-28386686 MsG0880043647.01.T01:CDS 25.0%
!! ATTAAAGGCACATAATAGTT+CGG - Chr8:28382173-28382192 None:intergenic 25.0%
!! CAATAGAACTCAATTACTTT+TGG - Chr8:28384024-28384043 None:intergenic 25.0%
!! CACATAATTTTCCAATTAGA+TGG - Chr8:28384474-28384493 None:intergenic 25.0%
!! TAAAAAACTTAGAGCTTGTT+TGG - Chr8:28383988-28384007 None:intergenic 25.0%
!! TAAGAACATGATTGTTACTT+TGG + Chr8:28386963-28386982 MsG0880043647.01.T01:three_prime_UTR 25.0%
!! TGTTTGATGATAAATGTTAG+AGG + Chr8:28385683-28385702 MsG0880043647.01.T01:intron 25.0%
!! TTAATTTGGGTGTTTATATG+TGG + Chr8:28386711-28386730 MsG0880043647.01.T01:CDS 25.0%
!!! ATGCACTCCTTTATTTATTT+TGG + Chr8:28382245-28382264 MsG0880043647.01.T01:intron 25.0%
!!! ATTGGACAAGTATTTTGAAA+CGG - Chr8:28381618-28381637 None:intergenic 25.0%
!!! CAAAATTTTGCTTTAGCTTA+TGG + Chr8:28382776-28382795 MsG0880043647.01.T01:intron 25.0%
!!! CAATTTATAGCTTTAGTTCA+TGG + Chr8:28380803-28380822 MsG0880043647.01.T01:intron 25.0%
!!! CGGAGTTTTATTATAATGAA+TGG + Chr8:28380894-28380913 MsG0880043647.01.T01:intron 25.0%
!!! CTAAGAGTTCATTTTTCAAT+TGG + Chr8:28382997-28383016 MsG0880043647.01.T01:CDS 25.0%
!!! GAATTGAAATTTTGATCCTA+GGG - Chr8:28386156-28386175 None:intergenic 25.0%
!!! TTAAGTTGGGGAAAATTATA+TGG - Chr8:28382491-28382510 None:intergenic 25.0%
!!! TTTTAGTGATGATAATGTTG+GGG - Chr8:28379910-28379929 None:intergenic 25.0%
AAGTTCCTTAAAGAATGATC+CGG + Chr8:28382062-28382081 MsG0880043647.01.T01:intron 30.0%
ACAAGATTAGCATAAGGTAA+AGG - Chr8:28380720-28380739 None:intergenic 30.0%
AGTAACCACCAAATATACAT+CGG - Chr8:28386425-28386444 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG - Chr8:28381636-28381655 None:intergenic 30.0%
ATATAGACATTAGCGGAAAA+CGG - Chr8:28380613-28380632 None:intergenic 30.0%
ATGGTTGAGCAAAATTTATG+TGG + Chr8:28385295-28385314 MsG0880043647.01.T01:intron 30.0%
ATTAAACAAGTTAGCCATAC+AGG - Chr8:28386068-28386087 None:intergenic 30.0%
CAAAAAATTCAGGACAATGT+TGG + Chr8:28384761-28384780 MsG0880043647.01.T01:intron 30.0%
CAAACAAAACAAGAAATCCA+TGG + Chr8:28385988-28386007 MsG0880043647.01.T01:CDS 30.0%
CAATACTACCGATGTATATT+TGG + Chr8:28386414-28386433 MsG0880043647.01.T01:CDS 30.0%
CATAGTTATACAAGTTAACG+TGG - Chr8:28384134-28384153 None:intergenic 30.0%
CATGATTAAAAAATGGGTGT+TGG - Chr8:28380183-28380202 None:intergenic 30.0%
CCATACAAATCAATATAGGT+GGG + Chr8:28385039-28385058 MsG0880043647.01.T01:intron 30.0%
CTATCAAACAACAAACACAA+AGG - Chr8:28385845-28385864 None:intergenic 30.0%
CTTTGTTACCCATCAATAAA+AGG - Chr8:28385538-28385557 None:intergenic 30.0%
GAAATGTGCAAATCTTGAAA+TGG - Chr8:28382680-28382699 None:intergenic 30.0%
GACAAGTGACAAACTTTAAT+AGG + Chr8:28385738-28385757 MsG0880043647.01.T01:intron 30.0%
GAGCTAAGTGATAAAAAAAG+AGG - Chr8:28382348-28382367 None:intergenic 30.0%
GATTGGAATTAGTTCACTAA+AGG + Chr8:28384493-28384512 MsG0880043647.01.T01:intron 30.0%
GGAAAGAATAATAATTGAGG+GGG - Chr8:28380151-28380170 None:intergenic 30.0%
GGAGGAAAGAATAATAATTG+AGG - Chr8:28380154-28380173 None:intergenic 30.0%
GGCAAAAATTGTTACTATGA+AGG - Chr8:28384955-28384974 None:intergenic 30.0%
GTGACAGCTATTAATAAAGT+TGG - Chr8:28382205-28382224 None:intergenic 30.0%
GTTAATGTTGCTAAAAGTCA+CGG + Chr8:28386371-28386390 MsG0880043647.01.T01:CDS 30.0%
GTTTATACCAGTATATCTTC+AGG + Chr8:28383058-28383077 MsG0880043647.01.T01:CDS 30.0%
TAGTTTACCTGAAGATATAC+TGG - Chr8:28383068-28383087 None:intergenic 30.0%
TATACTCACAATGGTTGTTT+CGG + Chr8:28386328-28386347 MsG0880043647.01.T01:CDS 30.0%
TCCATACAAATCAATATAGG+TGG + Chr8:28385038-28385057 MsG0880043647.01.T01:intron 30.0%
TGCTCCATACAAATCAATAT+AGG + Chr8:28385035-28385054 MsG0880043647.01.T01:CDS 30.0%
TGGAGCAAAGTATGATATTT+AGG - Chr8:28385022-28385041 None:intergenic 30.0%
TGGTTGAGCAAAATTTATGT+GGG + Chr8:28385296-28385315 MsG0880043647.01.T01:intron 30.0%
TTAAACAAGTTAGCCATACA+GGG - Chr8:28386067-28386086 None:intergenic 30.0%
TTATGTGGTTGAGGATTATT+AGG + Chr8:28385310-28385329 MsG0880043647.01.T01:intron 30.0%
TTTATACATAGAGCGGAAAA+CGG + Chr8:28380577-28380596 MsG0880043647.01.T01:intron 30.0%
! AGTACTATGTTTGGATTTTG+GGG - Chr8:28379834-28379853 None:intergenic 30.0%
! CACACCTTGATGATTATTAT+TGG + Chr8:28386666-28386685 MsG0880043647.01.T01:CDS 30.0%
! GAGTACTATGTTTGGATTTT+GGG - Chr8:28379835-28379854 None:intergenic 30.0%
! GTGACATATCTCAACTATTT+TGG + Chr8:28383520-28383539 MsG0880043647.01.T01:intron 30.0%
! GTGTTAAGTGCTGTTAATTT+GGG + Chr8:28386698-28386717 MsG0880043647.01.T01:CDS 30.0%
! GTTCATTCAGAAATTTTGTG+AGG - Chr8:28380297-28380316 None:intergenic 30.0%
! TATTAATAAAGTTGGCTCCA+AGG - Chr8:28382197-28382216 None:intergenic 30.0%
! TCTCTTTTTACACTAGATGA+TGG + Chr8:28385167-28385186 MsG0880043647.01.T01:intron 30.0%
! TGTGTTAAGTGCTGTTAATT+TGG + Chr8:28386697-28386716 MsG0880043647.01.T01:CDS 30.0%
! TTACAATTCACTCGTTTTAC+AGG - Chr8:28381558-28381577 None:intergenic 30.0%
! TTCATAGCTGATTCATATCT+TGG + Chr8:28380388-28380407 MsG0880043647.01.T01:CDS 30.0%
! TTGCTCACTTTAAAGAAACA+GGG + Chr8:28382146-28382165 MsG0880043647.01.T01:intron 30.0%
! TTTAGTGATGATAATGTTGG+GGG - Chr8:28379909-28379928 None:intergenic 30.0%
!! AATTATGGGAGTACTATGTT+TGG - Chr8:28379843-28379862 None:intergenic 30.0%
!! AGAGTTCATTTTTCAATTGG+TGG + Chr8:28383000-28383019 MsG0880043647.01.T01:CDS 30.0%
!! ATTTTTCAATTGGTGGTACT+TGG + Chr8:28383007-28383026 MsG0880043647.01.T01:CDS 30.0%
!! CTTGGACATGTATTTTGAAA+CGG + Chr8:28381826-28381845 MsG0880043647.01.T01:intron 30.0%
!! GGAATTGAAATTTTGATCCT+AGG - Chr8:28386157-28386176 None:intergenic 30.0%
!! TTAATTTGTTATGGGCATGT+AGG + Chr8:28385761-28385780 MsG0880043647.01.T01:intron 30.0%
!! TTATAAAAGACTGGTTTGCA+AGG + Chr8:28384237-28384256 MsG0880043647.01.T01:intron 30.0%
!! TTCTAAATTAAGAGTGCTTC+AGG - Chr8:28381968-28381987 None:intergenic 30.0%
!! TTTTGTTTAGGATGATGAGT+TGG - Chr8:28379944-28379963 None:intergenic 30.0%
!! TTTTTCAATTGGTGGTACTT+GGG + Chr8:28383008-28383027 MsG0880043647.01.T01:CDS 30.0%
!!! GTCACTTTTTTTTTTTGGAG+AGG + Chr8:28384090-28384109 MsG0880043647.01.T01:intron 30.0%
!!! TACTTTTTCATCTAGCATAG+AGG + Chr8:28383281-28383300 MsG0880043647.01.T01:intron 30.0%
!!! TAGAAATTGGGGTTTTGATT+TGG - Chr8:28379782-28379801 None:intergenic 30.0%
!!! TGGATTTCTTGTTTTGTTTG+AGG - Chr8:28385988-28386007 None:intergenic 30.0%
!!! TTTTACACTAGATGATGGAT+GGG + Chr8:28385172-28385191 MsG0880043647.01.T01:intron 30.0%
!!! TTTTTACACTAGATGATGGA+TGG + Chr8:28385171-28385190 MsG0880043647.01.T01:intron 30.0%
AAACACTTGTGAGATTGCTT+AGG - Chr8:28383935-28383954 None:intergenic 35.0%
AAGTTTGAACACAAGGCTTA+TGG - Chr8:28382932-28382951 None:intergenic 35.0%
AATGAGTGAAGACAAGAGTA+TGG - Chr8:28380425-28380444 None:intergenic 35.0%
ACATATTTCACCAAACAAGG+TGG + Chr8:28386116-28386135 MsG0880043647.01.T01:CDS 35.0%
AGAAACCAGTTTCACCAAAA+TGG + Chr8:28384409-28384428 MsG0880043647.01.T01:intron 35.0%
AGATGAAAGAAGTAACCAAG+AGG + Chr8:28386769-28386788 MsG0880043647.01.T01:CDS 35.0%
AGCACTACTACTAGAAATTG+GGG - Chr8:28379793-28379812 None:intergenic 35.0%
AGTAGCATTATCTATGGCAA+AGG - Chr8:28386851-28386870 None:intergenic 35.0%
AGTGAAAAACGTGAACACAT+GGG + Chr8:28380330-28380349 MsG0880043647.01.T01:CDS 35.0%
ATAACCGTGTTGCAAAGAAT+CGG + Chr8:28386287-28386306 MsG0880043647.01.T01:CDS 35.0%
ATTATGTGCCTTTAATGCCT+TGG + Chr8:28382177-28382196 MsG0880043647.01.T01:intron 35.0%
ATTGAAAAGACAGTTCTGTG+AGG - Chr8:28384444-28384463 None:intergenic 35.0%
CAATTTGCACACCATCTAAT+TGG + Chr8:28384460-28384479 MsG0880043647.01.T01:intron 35.0%
CACACATATTTCACCAAACA+AGG + Chr8:28386113-28386132 MsG0880043647.01.T01:CDS 35.0%
CGTATATTGGAACAACGAAA+AGG - Chr8:28386217-28386236 None:intergenic 35.0%
CTAAACCCACAATAAGTTGT+TGG - Chr8:28385811-28385830 None:intergenic 35.0%
CTTCCTCAATATATGATCAC+CGG + Chr8:28386443-28386462 MsG0880043647.01.T01:CDS 35.0%
GAAACCAGTTTCACCAAAAT+GGG + Chr8:28384410-28384429 MsG0880043647.01.T01:intron 35.0%
GAGCAAAATTTATGTGGTTG+AGG + Chr8:28385301-28385320 MsG0880043647.01.T01:intron 35.0%
GAGCACTACTACTAGAAATT+GGG - Chr8:28379794-28379813 None:intergenic 35.0%
GATGAAAGAAGTAACCAAGA+GGG + Chr8:28386770-28386789 MsG0880043647.01.T01:CDS 35.0%
GGAGTGAAAGACAAGTTATA+TGG + Chr8:28385276-28385295 MsG0880043647.01.T01:intron 35.0%
GGATACCAACAACTTATTGT+GGG + Chr8:28385803-28385822 MsG0880043647.01.T01:intron 35.0%
GTCTTCACTCATTTATCTTG+TGG + Chr8:28380432-28380451 MsG0880043647.01.T01:CDS 35.0%
GTTACCCATCAATAAAAGGT+GGG - Chr8:28385534-28385553 None:intergenic 35.0%
GTTGGGAGATAACATCAATA+GGG + Chr8:28386643-28386662 MsG0880043647.01.T01:CDS 35.0%
TAAATTGCAAGTGCATGCAT+GGG - Chr8:28382742-28382761 None:intergenic 35.0%
TACCCATTGATATGCTTAGT+TGG + Chr8:28385432-28385451 MsG0880043647.01.T01:intron 35.0%
TACTACCGATGTATATTTGG+TGG + Chr8:28386417-28386436 MsG0880043647.01.T01:CDS 35.0%
TACTATACTTATATACGCCG+CGG - Chr8:28386549-28386568 None:intergenic 35.0%
TAGTTCATGGTTCTTGATTC+TGG + Chr8:28380816-28380835 MsG0880043647.01.T01:intron 35.0%
TCTTCCTATTGGGAATCAAA+AGG + Chr8:28384837-28384856 MsG0880043647.01.T01:CDS 35.0%
TGGATACCAACAACTTATTG+TGG + Chr8:28385802-28385821 MsG0880043647.01.T01:intron 35.0%
TGTGTGATATGTTAGTGATG+TGG - Chr8:28381038-28381057 None:intergenic 35.0%
TGTTACCCATCAATAAAAGG+TGG - Chr8:28385535-28385554 None:intergenic 35.0%
TTAAATTGCAAGTGCATGCA+TGG - Chr8:28382743-28382762 None:intergenic 35.0%
TTAGTGTATATGGTAGGGTT+TGG - Chr8:28383341-28383360 None:intergenic 35.0%
TTCACTAAAGGTAAGAGAAG+TGG + Chr8:28384505-28384524 MsG0880043647.01.T01:intron 35.0%
TTCGATTATTGAATGAGCGT+TGG + Chr8:28385613-28385632 MsG0880043647.01.T01:intron 35.0%
TTTCTTGACACTTTCAGTGT+CGG + Chr8:28382845-28382864 MsG0880043647.01.T01:CDS 35.0%
! AGGATGTTTGGGTCTTATAT+AGG - Chr8:28379869-28379888 None:intergenic 35.0%
! ATGCAACACTTTGTCTTTTG+CGG + Chr8:28380874-28380893 MsG0880043647.01.T01:intron 35.0%
! CAATTTTTGCCATAGTGAAG+AGG + Chr8:28384964-28384983 MsG0880043647.01.T01:CDS 35.0%
! GACTAGTTATAGTCTTGGTT+TGG - Chr8:28383600-28383619 None:intergenic 35.0%
! GGATGTTTGGGTCTTATATA+GGG - Chr8:28379868-28379887 None:intergenic 35.0%
! GTTACCCACCTTTTATTGAT+GGG + Chr8:28385527-28385546 MsG0880043647.01.T01:intron 35.0%
! GTTGCTCACTTTAAAGAAAC+AGG + Chr8:28382145-28382164 MsG0880043647.01.T01:intron 35.0%
! TGAGGAATATGTTCCCATTT+TGG - Chr8:28384426-28384445 None:intergenic 35.0%
! TGGCTTTTACTTTGTACCTT+TGG + Chr8:28383540-28383559 MsG0880043647.01.T01:intron 35.0%
! TGTTACCCACCTTTTATTGA+TGG + Chr8:28385526-28385545 MsG0880043647.01.T01:intron 35.0%
! TTGCTTTAGCTTATGGTTGA+TGG + Chr8:28382783-28382802 MsG0880043647.01.T01:intron 35.0%
! TTTTATGATCAAATGCCGGA+CGG + Chr8:28386506-28386525 MsG0880043647.01.T01:CDS 35.0%
!! AAAAATGGGTGTTGGAGATT+TGG - Chr8:28380175-28380194 None:intergenic 35.0%
!! ACAAGGACTAGTTATAGTCT+TGG - Chr8:28383605-28383624 None:intergenic 35.0%
!! ATGATTTTGGAGAGGATGTT+TGG - Chr8:28379881-28379900 None:intergenic 35.0%
!! ATGGGCTTAGTTTGATAATG+AGG - Chr8:28382724-28382743 None:intergenic 35.0%
!! CCCACCTATATTGATTTGTA+TGG - Chr8:28385042-28385061 None:intergenic 35.0%
!! GAAATTTTGATCCTAGGGTA+TGG - Chr8:28386151-28386170 None:intergenic 35.0%
!! GGAGTACTATGTTTGGATTT+TGG - Chr8:28379836-28379855 None:intergenic 35.0%
!! TGATTTTGGAGAGGATGTTT+GGG - Chr8:28379880-28379899 None:intergenic 35.0%
!! TGTACCTTTTGATTCCCAAT+AGG - Chr8:28384844-28384863 None:intergenic 35.0%
!! TTCTGGAGTGTAGTAAAACA+AGG + Chr8:28386814-28386833 MsG0880043647.01.T01:exon 35.0%
!!! AGTTACTTTTGCTCTTGCTT+GGG - Chr8:28379992-28380011 None:intergenic 35.0%
!!! ATGGGTGGGTTAATTTTGAT+AGG + Chr8:28385190-28385209 MsG0880043647.01.T01:intron 35.0%
!!! GACAAGTATTTTGAAACGGA+GGG - Chr8:28381614-28381633 None:intergenic 35.0%
!!! GACATGTATTTTGAAACGGA+GGG + Chr8:28381830-28381849 MsG0880043647.01.T01:intron 35.0%
!!! TGGGTGGGTTAATTTTGATA+GGG + Chr8:28385191-28385210 MsG0880043647.01.T01:intron 35.0%
!!! TTTGGTGGTGAGTTTTGTTT+AGG - Chr8:28379956-28379975 None:intergenic 35.0%
AAAAACGTGAACACATGGGT+TGG + Chr8:28380334-28380353 MsG0880043647.01.T01:CDS 40.0%
AAAAGCTGGTGAGAAATGGT+TGG + Chr8:28386625-28386644 MsG0880043647.01.T01:CDS 40.0%
AAAGCTGGTGAGAAATGGTT+GGG + Chr8:28386626-28386645 MsG0880043647.01.T01:CDS 40.0%
AAATTCAGGACAATGTTGGG+TGG + Chr8:28384765-28384784 MsG0880043647.01.T01:intron 40.0%
AACGTTTCTCACGTCACATA+GGG + Chr8:28382816-28382835 MsG0880043647.01.T01:intron 40.0%
AACTCCGATTCTTTGCAACA+CGG - Chr8:28386294-28386313 None:intergenic 40.0%
AATTCAGGACAATGTTGGGT+GGG + Chr8:28384766-28384785 MsG0880043647.01.T01:intron 40.0%
ATGCCGGTGATCATATATTG+AGG - Chr8:28386449-28386468 None:intergenic 40.0%
CAAAACTCACCACCAAATCA+TGG + Chr8:28379959-28379978 MsG0880043647.01.T01:exon 40.0%
CAGTGAAAAACGTGAACACA+TGG + Chr8:28380329-28380348 MsG0880043647.01.T01:CDS 40.0%
CATATGTGAAGTGGTTGACT+TGG + Chr8:28381808-28381827 MsG0880043647.01.T01:intron 40.0%
CATCACTCCACAACCAAAAA+GGG + Chr8:28380020-28380039 MsG0880043647.01.T01:CDS 40.0%
CATCTTTCTCCTCTTCACTA+TGG - Chr8:28384976-28384995 None:intergenic 40.0%
CTTGTGTACAACTTGACCAA+AGG - Chr8:28383559-28383578 None:intergenic 40.0%
GAGATTTGCATACCAAGGTT+TGG + Chr8:28380252-28380271 MsG0880043647.01.T01:CDS 40.0%
GATTAATGTGCCACCTTGTT+TGG - Chr8:28386129-28386148 None:intergenic 40.0%
GCACTTTATGTGCTTTCCAT+TGG + Chr8:28382897-28382916 MsG0880043647.01.T01:CDS 40.0%
GCGGCGTATATAAGTATAGT+AGG + Chr8:28386548-28386567 MsG0880043647.01.T01:CDS 40.0%
GGCCAACTAAGCATATCAAT+GGG - Chr8:28385437-28385456 None:intergenic 40.0%
GGCTACAATAGATATCGTTC+TGG + Chr8:28386797-28386816 MsG0880043647.01.T01:CDS 40.0%
GGCTCTTGTAGAAACGAAAA+GGG + Chr8:28386349-28386368 MsG0880043647.01.T01:CDS 40.0%
GGTTGGGAGATAACATCAAT+AGG + Chr8:28386642-28386661 MsG0880043647.01.T01:CDS 40.0%
GTCACTGAACATAATCTCCA+TGG - Chr8:28386008-28386027 None:intergenic 40.0%
TAACGTTTCTCACGTCACAT+AGG + Chr8:28382815-28382834 MsG0880043647.01.T01:intron 40.0%
TACCTCCGGATCATTCTTTA+AGG - Chr8:28382070-28382089 None:intergenic 40.0%
TATGTGCTTTCCATTGGTGA+AGG + Chr8:28382903-28382922 MsG0880043647.01.T01:CDS 40.0%
TCTGATGCGTTTACTATCGT+TGG + Chr8:28386470-28386489 MsG0880043647.01.T01:CDS 40.0%
TGAGATTTGATGCCAAACCT+TGG - Chr8:28380267-28380286 None:intergenic 40.0%
TTCCTTAAAGAATGATCCGG+AGG + Chr8:28382065-28382084 MsG0880043647.01.T01:intron 40.0%
TTCTTCGTCTAATCCCTGTA+TGG + Chr8:28386051-28386070 MsG0880043647.01.T01:CDS 40.0%
TTGTCACTCATCCAACAACA+TGG - Chr8:28385723-28385742 None:intergenic 40.0%
TTGTTATGGGCATGTAGGTT+GGG + Chr8:28385766-28385785 MsG0880043647.01.T01:intron 40.0%
! CCACTTGCTAGAAAATTCAC+CGG + Chr8:28386251-28386270 MsG0880043647.01.T01:CDS 40.0%
! GGAGCACTACTACTAGAAAT+TGG - Chr8:28379795-28379814 None:intergenic 40.0%
! GGGAATCAAAAGGTACAGAA+AGG + Chr8:28384847-28384866 MsG0880043647.01.T01:CDS 40.0%
! GTGCATTGACATATGTGAAG+TGG + Chr8:28381799-28381818 MsG0880043647.01.T01:intron 40.0%
! GTTGGGGGAAATCATGATTT+TGG - Chr8:28379894-28379913 None:intergenic 40.0%
! TTGTAAATGGACTCCCTGTA+GGG - Chr8:28384877-28384896 None:intergenic 40.0%
! TTTGTTATGGGCATGTAGGT+TGG + Chr8:28385765-28385784 MsG0880043647.01.T01:intron 40.0%
! TTTTTCACTGCTGTGGTTGT+TGG - Chr8:28380319-28380338 None:intergenic 40.0%
!! AAAAGACTGGTTTGCAAGGT+TGG + Chr8:28384241-28384260 MsG0880043647.01.T01:intron 40.0%
!! CAAAGTGTTGCATCACAAAG+AGG - Chr8:28380867-28380886 None:intergenic 40.0%
!! GGGAAATCATGATTTTGGAG+AGG - Chr8:28379889-28379908 None:intergenic 40.0%
!! TGTTCCCATTTTGGTGAAAC+TGG - Chr8:28384417-28384436 None:intergenic 40.0%
!!! ATGTTTGGATTTTGGGGTGT+GGG - Chr8:28379828-28379847 None:intergenic 40.0%
!!! GAGTTACTTTTGCTCTTGCT+TGG - Chr8:28379993-28380012 None:intergenic 40.0%
!!! GGACAAGTATTTTGAAACGG+AGG - Chr8:28381615-28381634 None:intergenic 40.0%
!!! GGACATGTATTTTGAAACGG+AGG + Chr8:28381829-28381848 MsG0880043647.01.T01:intron 40.0%
!!! TATGTTTGGATTTTGGGGTG+TGG - Chr8:28379829-28379848 None:intergenic 40.0%
AAATTCACCGGTCACCCAAA+TGG + Chr8:28386263-28386282 MsG0880043647.01.T01:CDS 45.0%
AATTCACCGGTCACCCAAAT+GGG + Chr8:28386264-28386283 MsG0880043647.01.T01:CDS 45.0%
ACAGAAAGGAAAGCCCTACA+GGG + Chr8:28384861-28384880 MsG0880043647.01.T01:CDS 45.0%
ACCAAGCAAAGGGAATAGTG+AGG - Chr8:28380365-28380384 None:intergenic 45.0%
ACTCATCCAACAACATGGCT+TGG - Chr8:28385718-28385737 None:intergenic 45.0%
AGAAGTAACCAAGAGGGTTC+TGG + Chr8:28386776-28386795 MsG0880043647.01.T01:CDS 45.0%
AGGGAGTCCATTTACAAGAC+TGG + Chr8:28384880-28384899 MsG0880043647.01.T01:CDS 45.0%
AGTAAACGCATCAGAGATGC+CGG - Chr8:28386465-28386484 None:intergenic 45.0%
ATTCAGGACAATGTTGGGTG+GGG + Chr8:28384767-28384786 MsG0880043647.01.T01:intron 45.0%
CAACATCCAAGCCATGTTGT+TGG + Chr8:28385709-28385728 MsG0880043647.01.T01:intron 45.0%
CACTTGTGAGATTGCTTAGG+AGG - Chr8:28383932-28383951 None:intergenic 45.0%
CCATCACTCCACAACCAAAA+AGG + Chr8:28380019-28380038 MsG0880043647.01.T01:CDS 45.0%
CGGCTCTTGTAGAAACGAAA+AGG + Chr8:28386348-28386367 MsG0880043647.01.T01:CDS 45.0%
CTATGAAGCCACCAAGCAAA+GGG - Chr8:28380375-28380394 None:intergenic 45.0%
CTCTTAGCATCCTTCTCTTC+CGG - Chr8:28382984-28383003 None:intergenic 45.0%
GAATGCTAACGATGTACCTC+CGG - Chr8:28382084-28382103 None:intergenic 45.0%
GAGGCAATTAGTGCAAAAGC+TGG + Chr8:28386611-28386630 MsG0880043647.01.T01:CDS 45.0%
GCAACACGGTTATCCCATTT+GGG - Chr8:28386280-28386299 None:intergenic 45.0%
GCTGAGAGATTTGCATACCA+AGG + Chr8:28380247-28380266 MsG0880043647.01.T01:CDS 45.0%
GGCACATTAATCCATACCCT+AGG + Chr8:28386137-28386156 MsG0880043647.01.T01:CDS 45.0%
GGGCCAACTAAGCATATCAA+TGG - Chr8:28385438-28385457 None:intergenic 45.0%
GGTCGAACATGAACATGATG+AGG - Chr8:28385001-28385020 None:intergenic 45.0%
GTGCAAAAGCTGGTGAGAAA+TGG + Chr8:28386621-28386640 MsG0880043647.01.T01:CDS 45.0%
GTGTTGCAAAGAATCGGAGT+TGG + Chr8:28386293-28386312 MsG0880043647.01.T01:CDS 45.0%
GTTTCTACTTCCCACACGTA+GGG - Chr8:28380923-28380942 None:intergenic 45.0%
TACAGAAAGGAAAGCCCTAC+AGG + Chr8:28384860-28384879 MsG0880043647.01.T01:CDS 45.0%
TATTGTAGCCAGAACCCTCT+TGG - Chr8:28386787-28386806 None:intergenic 45.0%
TCACTATTCCCTTTGCTTGG+TGG + Chr8:28380364-28380383 MsG0880043647.01.T01:CDS 45.0%
TCCTCACTATTCCCTTTGCT+TGG + Chr8:28380361-28380380 MsG0880043647.01.T01:CDS 45.0%
TGCAACACGGTTATCCCATT+TGG - Chr8:28386281-28386300 None:intergenic 45.0%
TTGGGCTATCTGCCATGATT+TGG - Chr8:28379974-28379993 None:intergenic 45.0%
TTTCTACTTCCCACACGTAG+GGG - Chr8:28380922-28380941 None:intergenic 45.0%
! ACGAAGACTCGGTCGTATAT+TGG - Chr8:28386230-28386249 None:intergenic 45.0%
! ACTTGGGCCAGTCTTGTAAA+TGG - Chr8:28384890-28384909 None:intergenic 45.0%
! AGCATTCCAACCACCCTTTT+TGG - Chr8:28380036-28380055 None:intergenic 45.0%
! AGTTGGCTCCAAGGCATTAA+AGG - Chr8:28382188-28382207 None:intergenic 45.0%
! CAACAACATGGCTTGGATGT+TGG - Chr8:28385711-28385730 None:intergenic 45.0%
! CTTGTAAATGGACTCCCTGT+AGG - Chr8:28384878-28384897 None:intergenic 45.0%
! GCATTGGCACTCTTCCTATT+GGG + Chr8:28384827-28384846 MsG0880043647.01.T01:CDS 45.0%
! GTTCACGTTTTTCACTGCTG+TGG - Chr8:28380326-28380345 None:intergenic 45.0%
!! AATGGGTGTTGGAGATTTGG+AGG - Chr8:28380172-28380191 None:intergenic 45.0%
!! ACACTAGATGATGGATGGGT+GGG + Chr8:28385176-28385195 MsG0880043647.01.T01:intron 45.0%
!! CCGGTGAATTTTCTAGCAAG+TGG - Chr8:28386254-28386273 None:intergenic 45.0%
!! TACACTAGATGATGGATGGG+TGG + Chr8:28385175-28385194 MsG0880043647.01.T01:intron 45.0%
!!! CCTTTTTGGTTGTGGAGTGA+TGG - Chr8:28380022-28380041 None:intergenic 45.0%
!!! TGTTTGGATTTTGGGGTGTG+GGG - Chr8:28379827-28379846 None:intergenic 45.0%
!! TATAAATTGAAATTTAATAT+TGG - Chr8:28380792-28380811 None:intergenic 5.0%
!!! ATTTAAAATAAAATAAAATG+AGG - Chr8:28384050-28384069 None:intergenic 5.0%
AGCTGCGGCGACAAAAACTT+GGG - Chr8:28384906-28384925 None:intergenic 50.0%
CACTCCACAACCAAAAAGGG+TGG + Chr8:28380023-28380042 MsG0880043647.01.T01:CDS 50.0%
CCACAACCAAAAAGGGTGGT+TGG + Chr8:28380027-28380046 MsG0880043647.01.T01:CDS 50.0%
CTTATGGCCTCCTTCACCAA+TGG - Chr8:28382916-28382935 None:intergenic 50.0%
GCGGCGAAAGTTTGAACACA+AGG - Chr8:28382939-28382958 None:intergenic 50.0%
GCTATGAAGCCACCAAGCAA+AGG - Chr8:28380376-28380395 None:intergenic 50.0%
GGTTATCCCATTTGGGTGAC+CGG - Chr8:28386273-28386292 None:intergenic 50.0%
GGTTTCTACTTCCCACACGT+AGG - Chr8:28380924-28380943 None:intergenic 50.0%
GTGCTTTCCATTGGTGAAGG+AGG + Chr8:28382906-28382925 MsG0880043647.01.T01:CDS 50.0%
TAGCAAGTGGCACGAAGACT+CGG - Chr8:28386241-28386260 None:intergenic 50.0%
TGGTTCTTGATTCTGGCAGC+TGG + Chr8:28380823-28380842 MsG0880043647.01.T01:intron 50.0%
TTCCCTCCAGCATCACTTCA+AGG + Chr8:28386173-28386192 MsG0880043647.01.T01:CDS 50.0%
! CATGTAGGTTGGGTTTCGGT+TGG + Chr8:28385776-28385795 MsG0880043647.01.T01:intron 50.0%
! GGCTATCTGCCATGATTTGG+TGG - Chr8:28379971-28379990 None:intergenic 50.0%
! TGGGCATGTAGGTTGGGTTT+CGG + Chr8:28385772-28385791 MsG0880043647.01.T01:intron 50.0%
! TTGGTGGTACTTGGGCATTG+TGG + Chr8:28383016-28383035 MsG0880043647.01.T01:CDS 50.0%
!! AGGAGTATTGGCAGGAGTGT+TGG + Chr8:28384799-28384818 MsG0880043647.01.T01:CDS 50.0%
!! AGGAGTGTTGGCATTGGCAT+TGG + Chr8:28384811-28384830 MsG0880043647.01.T01:CDS 50.0%
!! ATTGGCAGGAGTGTTGGCAT+TGG + Chr8:28384805-28384824 MsG0880043647.01.T01:CDS 50.0%
!! GACTGGTTTGCAAGGTTGGT+AGG + Chr8:28384245-28384264 MsG0880043647.01.T01:intron 50.0%
!! GGCATTGGCACTCTTCCTAT+TGG + Chr8:28384826-28384845 MsG0880043647.01.T01:CDS 50.0%
!! GGTTGTGGAGTGATGGATGA+GGG - Chr8:28380015-28380034 None:intergenic 50.0%
!! TGGTTGTGGAGTGATGGATG+AGG - Chr8:28380016-28380035 None:intergenic 50.0%
!!! CCAACCACCCTTTTTGGTTG+TGG - Chr8:28380030-28380049 None:intergenic 50.0%
AAAGGATCGTGACTCCGACG+AGG - Chr8:28386199-28386218 None:intergenic 55.0%
ACAATGTTGGGTGGGGTGTG+GGG + Chr8:28384774-28384793 MsG0880043647.01.T01:CDS 55.0%
ACGAGGCCTTGAAGTGATGC+TGG - Chr8:28386182-28386201 None:intergenic 55.0%
ACTGAGAAGTTTGGGAGCCG+CGG + Chr8:28386529-28386548 MsG0880043647.01.T01:CDS 55.0%
AGGCCTTGAAGTGATGCTGG+AGG - Chr8:28386179-28386198 None:intergenic 55.0%
CCCAAACTTCTCAGTCCGTC+CGG - Chr8:28386524-28386543 None:intergenic 55.0%
CGTGTCGTCGTCGAACTGAT+CGG - Chr8:28382961-28382980 None:intergenic 55.0%
GACAATGTTGGGTGGGGTGT+GGG + Chr8:28384773-28384792 MsG0880043647.01.T01:CDS 55.0%
GAGCTGCGGCGACAAAAACT+TGG - Chr8:28384907-28384926 None:intergenic 55.0%
GCATCACTTCAAGGCCTCGT+CGG + Chr8:28386182-28386201 MsG0880043647.01.T01:CDS 55.0%
GGCCTTGAAGTGATGCTGGA+GGG - Chr8:28386178-28386197 None:intergenic 55.0%
GGTTGGGTTTCGGTTGGAGT+TGG + Chr8:28385782-28385801 MsG0880043647.01.T01:intron 55.0%
TGGGGTGTGGGGATGAGAAA+AGG - Chr8:28379816-28379835 None:intergenic 55.0%
! GGGTGTGGGGTTAGGAGTAT+TGG + Chr8:28384787-28384806 MsG0880043647.01.T01:CDS 55.0%
! TGGTACTTGGGCATTGTGGC+TGG + Chr8:28383020-28383039 MsG0880043647.01.T01:CDS 55.0%
!! CCGGACGGACTGAGAAGTTT+GGG + Chr8:28386521-28386540 MsG0880043647.01.T01:CDS 55.0%
!! GTGGGGTTAGGAGTATTGGC+AGG + Chr8:28384791-28384810 MsG0880043647.01.T01:CDS 55.0%
ATGAATGGGGCCCCTACGTG+TGG + Chr8:28380909-28380928 MsG0880043647.01.T01:intron 60.0%
GGACAATGTTGGGTGGGGTG+TGG + Chr8:28384772-28384791 MsG0880043647.01.T01:intron 60.0%
GTCGTCGTCGAACTGATCGG+CGG - Chr8:28382958-28382977 None:intergenic 60.0%
TCAGTTCGACGACGACACGC+CGG + Chr8:28382962-28382981 MsG0880043647.01.T01:CDS 60.0%
TGAATGGGGCCCCTACGTGT+GGG + Chr8:28380910-28380929 MsG0880043647.01.T01:intron 60.0%
!! GCCGGACGGACTGAGAAGTT+TGG + Chr8:28386520-28386539 MsG0880043647.01.T01:CDS 60.0%
CGACGACACGCCGGAAGAGA+AGG + Chr8:28382971-28382990 MsG0880043647.01.T01:CDS 65.0%
GTTGGGTGGGGTGTGGGGTT+AGG + Chr8:28384779-28384798 MsG0880043647.01.T01:CDS 65.0%
TTGTCGCCGCAGCTCGCAAG+TGG + Chr8:28384912-28384931 MsG0880043647.01.T01:CDS 65.0%
CACGCGCCACTTGCGAGCTG+CGG - Chr8:28384921-28384940 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 28379768 28387025 28379768 ID=MsG0880043647.01;Name=MsG0880043647.01
Chr8 mRNA 28379768 28387025 28379768 ID=MsG0880043647.01.T01;Parent=MsG0880043647.01;Name=MsG0880043647.01.T01;_AED=0.37;_eAED=0.37;_QI=210|1|1|1|0.5|0.6|5|199|572
Chr8 exon 28385947 28387025 28385947 ID=MsG0880043647.01.T01:exon:10260;Parent=MsG0880043647.01.T01
Chr8 exon 28384773 28385056 28384773 ID=MsG0880043647.01.T01:exon:10259;Parent=MsG0880043647.01.T01
Chr8 exon 28382837 28383079 28382837 ID=MsG0880043647.01.T01:exon:10258;Parent=MsG0880043647.01.T01
Chr8 exon 28380236 28380453 28380236 ID=MsG0880043647.01.T01:exon:10257;Parent=MsG0880043647.01.T01
Chr8 exon 28379768 28380071 28379768 ID=MsG0880043647.01.T01:exon:10256;Parent=MsG0880043647.01.T01
Chr8 five_prime_UTR 28379768 28379977 28379768 ID=MsG0880043647.01.T01:five_prime_utr;Parent=MsG0880043647.01.T01
Chr8 CDS 28379978 28380071 28379978 ID=MsG0880043647.01.T01:cds;Parent=MsG0880043647.01.T01
Chr8 CDS 28380236 28380453 28380236 ID=MsG0880043647.01.T01:cds;Parent=MsG0880043647.01.T01
Chr8 CDS 28382837 28383079 28382837 ID=MsG0880043647.01.T01:cds;Parent=MsG0880043647.01.T01
Chr8 CDS 28384773 28385056 28384773 ID=MsG0880043647.01.T01:cds;Parent=MsG0880043647.01.T01
Chr8 CDS 28385947 28386826 28385947 ID=MsG0880043647.01.T01:cds;Parent=MsG0880043647.01.T01
Chr8 three_prime_UTR 28386827 28387025 28386827 ID=MsG0880043647.01.T01:three_prime_utr;Parent=MsG0880043647.01.T01
Gene Sequence

>MsG0880043647.01.T01

ATGGCAGATAGCCCAAGCAAGAGCAAAAGTAACTCCCTCATCCATCACTCCACAACCAAAAAGGGTGGTTGGAATGCTGCCATATTCATCATATTTGTGGAATTTGCTGAGAGATTTGCATACCAAGGTTTGGCATCAAATCTCATAAACTACCTCACAAAATTTCTGAATGAACCAACAACCACAGCAGTGAAAAACGTGAACACATGGGTTGGTGTCTCCTCACTATTCCCTTTGCTTGGTGGCTTCATAGCTGATTCATATCTTGGTCGATTCAACACCATACTCTTGTCTTCACTCATTTATCTTGTGGGCATGATTTTCTTGACACTTTCAGTGTCGGCACTTAGACACAAGACACTTTTCTTCTTTGCACTTTATGTGCTTTCCATTGGTGAAGGAGGCCATAAGCCTTGTGTTCAAACTTTCGCCGCCGATCAGTTCGACGACGACACGCCGGAAGAGAAGGATGCTAAGAGTTCATTTTTCAATTGGTGGTACTTGGGCATTGTGGCTGGTTCAACTGCTGCTGTGTTTATACCAGTATATCTTCAGGACAATGTTGGGTGGGGTGTGGGGTTAGGAGTATTGGCAGGAGTGTTGGCATTGGCATTGGCACTCTTCCTATTGGGAATCAAAAGGTACAGAAAGGAAAGCCCTACAGGGAGTCCATTTACAAGACTGGCCCAAGTTTTTGTCGCCGCAGCTCGCAAGTGGCGCGTGCAAGACACTCTCCTTCATAGTAACAATTTTTGCCATAGTGAAGAGGAGAAAGATGAGCCTCATCATGTTCATGTTCGACCTAAATATCATACTTTGCTCCATACAAATCAATATAGATTTTTGGACAAAGCAGCAATAATTGATGAAGTTGATTCCTCAAACAAAACAAGAAATCCATGGAGATTATGTTCAGTGACTCAAGTTGAAGAAGTGAAACTAGTTCTTCGTCTAATCCCTGTATGGCTAACTTGTTTAATGTTCACTGTTGTTCAAGCTCAAGTACACACATATTTCACCAAACAAGGTGGCACATTAATCCATACCCTAGGATCAAAATTTCAATTCCCTCCAGCATCACTTCAAGGCCTCGTCGGAGTCACGATCCTTTTCGTTGTTCCAATATACGACCGAGTCTTCGTGCCACTTGCTAGAAAATTCACCGGTCACCCAAATGGGATAACCGTGTTGCAAAGAATCGGAGTTGGTTTATTTTTATCTATACTCACAATGGTTGTTTCGGCTCTTGTAGAAACGAAAAGGGTTAATGTTGCTAAAAGTCACGGTCTAATAGACGATCAAAGTGCAATACTACCGATGTATATTTGGTGGTTACTTCCTCAATATATGATCACCGGCATCTCTGATGCGTTTACTATCGTTGGATTACAAGAAATTTTTTATGATCAAATGCCGGACGGACTGAGAAGTTTGGGAGCCGCGGCGTATATAAGTATAGTAGGAGTTGGAAGCTTTGTTAGTAACATTATAATTGAAGTTGTTGAGGCAATTAGTGCAAAAGCTGGTGAGAAATGGTTGGGAGATAACATCAATAGGGCACACCTTGATGATTATTATTGGGTTATGGCTGTGTTAAGTGCTGTTAATTTGGGTGTTTATATGTGGATTGCAAAGTGTTTTGAGTATAAAAAGGTAGATGGAGATGAAAGAAGTAACCAAGAGGGTTCTGGCTACAATAGATATCGTTCTGGAGTGTAG
Protein sequence

>MsG0880043647.01.T01

MADSPSKSKSNSLIHHSTTKKGGWNAAIFIIFVEFAERFAYQGLASNLINYLTKFLNEPTTTAVKNVNTWVGVSSLFPLLGGFIADSYLGRFNTILLSSLIYLVGMIFLTLSVSALRHKTLFFFALYVLSIGEGGHKPCVQTFAADQFDDDTPEEKDAKSSFFNWWYLGIVAGSTAAVFIPVYLQDNVGWGVGLGVLAGVLALALALFLLGIKRYRKESPTGSPFTRLAQVFVAAARKWRVQDTLLHSNNFCHSEEEKDEPHHVHVRPKYHTLLHTNQYRFLDKAAIIDEVDSSNKTRNPWRLCSVTQVEEVKLVLRLIPVWLTCLMFTVVQAQVHTYFTKQGGTLIHTLGSKFQFPPASLQGLVGVTILFVVPIYDRVFVPLARKFTGHPNGITVLQRIGVGLFLSILTMVVSALVETKRVNVAKSHGLIDDQSAILPMYIWWLLPQYMITGISDAFTIVGLQEIFYDQMPDGLRSLGAAAYISIVGVGSFVSNIIIEVVEAISAKAGEKWLGDNINRAHLDDYYWVMAVLSAVNLGVYMWIAKCFEYKKVDGDERSNQEGSGYNRYRSGV*