AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010082.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010082.01.T01 MTR_2g076960 90.114 263 8 2 1 245 1 263 6.18e-170 469
MsG0280010082.01.T01 MTR_8g086270 72.047 254 52 3 3 237 2 255 4.99e-128 363
MsG0280010082.01.T01 MTR_2g091225 69.231 260 60 4 1 241 1 259 1.53e-126 359
MsG0280010082.01.T01 MTR_2g015980 69.262 244 55 4 9 233 6 248 2.88e-118 338
MsG0280010082.01.T01 MTR_4g083060 63.985 261 76 2 3 245 2 262 4.65e-112 323
MsG0280010082.01.T01 MTR_5g044160 66.390 241 63 2 8 230 7 247 5.18e-112 322
MsG0280010082.01.T01 MTR_2g091225 67.660 235 57 3 26 241 2 236 6.16e-112 321
MsG0280010082.01.T01 MTR_5g064580 59.231 260 85 4 1 240 1 259 1.41e-100 293
MsG0280010082.01.T01 MTR_3g099380 58.824 255 85 3 1 235 1 255 3.30e-98 287
MsG0280010082.01.T01 MTR_3g100620 57.447 235 79 3 8 221 11 245 2.66e-87 259
MsG0280010082.01.T01 MTR_3g099380 55.665 203 70 3 1 183 1 203 3.28e-68 209
MsG0280010082.01.T01 MTR_0137s0020 44.538 238 100 7 8 220 11 241 2.43e-52 170
MsG0280010082.01.T01 MTR_3g014060 44.118 238 101 7 8 220 11 241 1.74e-51 168
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010082.01.T01 AT2G42590 66.535 254 66 3 8 242 7 260 2.74e-117 336
MsG0280010082.01.T01 AT2G42590 66.275 255 66 3 8 242 7 261 1.20e-116 334
MsG0280010082.01.T01 AT2G42590 66.275 255 66 3 8 242 7 261 1.21e-116 335
MsG0280010082.01.T01 AT1G26480 67.797 236 58 2 8 225 10 245 4.90e-113 325
MsG0280010082.01.T01 AT1G34760 63.707 259 68 4 6 245 3 254 3.08e-112 323
MsG0280010082.01.T01 AT1G34760 64.427 253 65 3 6 240 3 248 3.74e-112 322
MsG0280010082.01.T01 AT1G22300 67.220 241 61 2 6 228 3 243 2.78e-109 315
MsG0280010082.01.T01 AT1G22300 67.220 241 61 2 6 228 3 243 3.07e-109 315
MsG0280010082.01.T01 AT1G22300 68.067 238 58 2 6 225 3 240 1.58e-108 313
MsG0280010082.01.T01 AT5G38480 61.905 252 76 4 6 237 2 253 7.99e-101 294
MsG0280010082.01.T01 AT5G38480 63.525 244 69 4 6 229 2 245 7.03e-100 291
MsG0280010082.01.T01 AT5G38480 63.525 244 69 4 6 229 2 245 7.03e-100 291
MsG0280010082.01.T01 AT1G78300 57.252 262 89 5 1 242 1 259 1.35e-95 281
MsG0280010082.01.T01 AT3G02520 58.015 262 85 6 1 242 1 257 3.03e-95 280
MsG0280010082.01.T01 AT3G02520 58.015 262 85 6 1 242 1 257 3.03e-95 280
MsG0280010082.01.T01 AT1G35160 55.725 262 95 4 3 243 6 267 1.74e-94 278
MsG0280010082.01.T01 AT4G09000 55.985 259 94 3 4 242 6 264 7.94e-94 276
MsG0280010082.01.T01 AT1G35160 58.577 239 79 3 3 221 6 244 8.31e-93 275
MsG0280010082.01.T01 AT4G09000 58.403 238 79 3 4 221 6 243 2.02e-91 272
MsG0280010082.01.T01 AT5G65430 57.438 242 82 3 3 223 2 243 3.49e-91 269
MsG0280010082.01.T01 AT5G65430 57.202 243 83 3 3 224 2 244 4.02e-91 269
MsG0280010082.01.T01 AT5G65430 57.500 240 81 3 3 221 2 241 3.43e-90 267
MsG0280010082.01.T01 AT5G16050 58.065 248 83 4 3 229 2 249 3.92e-90 267
MsG0280010082.01.T01 AT5G16050 58.065 248 83 4 3 229 2 249 3.92e-90 267
MsG0280010082.01.T01 AT5G10450 55.785 242 86 3 3 223 2 243 5.71e-90 266
MsG0280010082.01.T01 AT5G10450 55.556 243 87 3 3 224 2 244 6.51e-90 266
MsG0280010082.01.T01 AT5G10450 55.833 240 85 3 3 221 2 241 3.36e-89 265
MsG0280010082.01.T01 AT5G10450 55.833 240 85 3 3 221 2 241 6.12e-89 264
MsG0280010082.01.T01 AT1G78220 44.856 243 112 3 6 229 3 242 9.96e-67 207
MsG0280010082.01.T01 AT1G22290 50.000 192 88 4 12 197 9 198 6.39e-50 163
MsG0280010082.01.T01 AT1G22290 48.718 195 92 4 6 194 3 195 1.71e-49 161

Find 72 sgRNAs with CRISPR-Local

Find 313 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCGAGACAACCTTACTTTA+TGG 0.114948 2:+64005218 MsG0280010082.01.T01:CDS
CCTTGTAAGAATCTTCATTT+AGG 0.161442 2:-64005171 None:intergenic
GTTATATTTGGTCCAGTAAA+TGG 0.171453 2:-64005670 None:intergenic
AGTATCTTACCACCATCTTC+TGG 0.240375 2:-64005253 None:intergenic
AAGGAGATATTATCGGTATT+TGG 0.253590 2:+64002370 MsG0280010082.01.T01:CDS
ACCTTCAAGAATCCATTTAC+TGG 0.275962 2:+64005658 MsG0280010082.01.T01:three_prime_UTR
ATTGAATGTTAAGCGTATTA+AGG 0.286248 2:+64002109 MsG0280010082.01.T01:CDS
CACCATTGGTTTGTAATACA+TGG 0.342646 2:+64005602 MsG0280010082.01.T01:three_prime_UTR
CGGTCACGATGAAGATGAAT+TGG 0.358772 2:+64005381 MsG0280010082.01.T01:CDS
CTTGTAAGAATCTTCATTTA+GGG 0.359911 2:-64005170 None:intergenic
GGCTTGCTTTGCCAGGTGGC+AGG 0.380270 2:-64005119 None:intergenic
GTATCTTACCACCATCTTCT+GGG 0.419272 2:-64005252 None:intergenic
CATCAAAGGCTTGCTTTGCC+AGG 0.441295 2:-64005126 None:intergenic
CATAATGTCATTGCAAATGT+TGG 0.442212 2:-64002162 None:intergenic
TCTGTCACTTAAAGCATATC+AGG 0.452952 2:+64002433 MsG0280010082.01.T01:CDS
GAGCAGAAAGAAGAATCAAA+AGG 0.455348 2:+64002080 MsG0280010082.01.T01:CDS
GAGCGAAACTTGTTCTCTGT+TGG 0.456977 2:+64002002 MsG0280010082.01.T01:CDS
AGCGAAACTTGTTCTCTGTT+GGG 0.459155 2:+64002003 MsG0280010082.01.T01:CDS
TCCAGTAAATGGATTCTTGA+AGG 0.459852 2:-64005659 None:intergenic
ACATCCTATCCGATTGGGTC+TGG 0.460221 2:+64004971 MsG0280010082.01.T01:CDS
TGATGATGGTGTCTCAGAAC+TGG 0.464411 2:+64005144 MsG0280010082.01.T01:CDS
GGTGGAGGCAATGAAGAAAC+TGG 0.479492 2:+64001950 MsG0280010082.01.T01:CDS
TGGGGTCTAGAAGAGCTTCA+TGG 0.491874 2:+64002039 MsG0280010082.01.T01:CDS
TATCAGAAGTCCATAAAGTA+AGG 0.493501 2:-64005228 None:intergenic
GTTGGGTACAAGAATGTGGT+GGG 0.494353 2:+64002020 MsG0280010082.01.T01:CDS
TGTAGGAAAGGAGATATTAT+CGG 0.495113 2:+64002363 MsG0280010082.01.T01:intron
AATGAAGAAACTGGCGAAGA+TGG 0.495701 2:+64001959 MsG0280010082.01.T01:CDS
TCGCAACAGCTGCATGATCA+AGG 0.508740 2:-64005200 None:intergenic
TTCAGCAGGCTTCACTACAT+TGG 0.510080 2:-64005476 None:intergenic
TTGTGTAACAATAACACCAT+TGG 0.512228 2:+64005588 MsG0280010082.01.T01:three_prime_UTR
ACCAACACATCCTATCCGAT+TGG 0.515197 2:+64004965 MsG0280010082.01.T01:CDS
TGTGGATTCAGCAATATTAG+TGG 0.520454 2:-64002213 None:intergenic
TAAGGAGTATAGGCAGAAGG+TGG 0.522406 2:+64002127 MsG0280010082.01.T01:CDS
AGCAGAAAGAAGAATCAAAA+GGG 0.534447 2:+64002081 MsG0280010082.01.T01:CDS
CCAACACATCCTATCCGATT+GGG 0.541379 2:+64004966 MsG0280010082.01.T01:CDS
TTAAGCGTATTAAGGAGTAT+AGG 0.542232 2:+64002117 MsG0280010082.01.T01:CDS
AATTTAGAGCCAGACCCAAT+CGG 0.544357 2:-64004980 None:intergenic
GAACAAGCTGAACGCTATGA+TGG 0.545101 2:+64001075 MsG0280010082.01.T01:CDS
GGAGTATAGGCAGAAGGTGG+AGG 0.546524 2:+64002130 MsG0280010082.01.T01:CDS
TGTTGGGTACAAGAATGTGG+TGG 0.548366 2:+64002019 MsG0280010082.01.T01:CDS
GCAGAGAGAAATTTCAGCCA+TGG 0.552274 2:+64001002 MsG0280010082.01.T01:exon
GGTCACGATGAAGATGAATT+GGG 0.552562 2:+64005382 MsG0280010082.01.T01:CDS
TATTTGGCGGAATTCAAAGC+TGG 0.559761 2:+64002386 MsG0280010082.01.T01:CDS
TTCTGAGACACCATCATCAA+AGG 0.562143 2:-64005140 None:intergenic
AAAGTTCTCACGGACGTTGG+TGG 0.569457 2:-64001031 None:intergenic
GTATAGGCAGAAGGTGGAGG+CGG 0.569485 2:+64002133 MsG0280010082.01.T01:CDS
CCCAATCGGATAGGATGTGT+TGG 0.570799 2:-64004966 None:intergenic
CCTAAATGAAGATTCTTACA+AGG 0.576397 2:+64005171 MsG0280010082.01.T01:CDS
AATGTGGTGTGCAGAAATGG+TGG 0.577560 2:+64001932 MsG0280010082.01.T01:intron
GACGTTGGTGGAAGAAGCCA+TGG 0.579581 2:-64001019 None:intergenic
ATCCATGTATTACAAACCAA+TGG 0.580667 2:-64005604 None:intergenic
ACTTCTGATATCCCAGAAGA+TGG 0.590224 2:+64005241 MsG0280010082.01.T01:CDS
CGATGAAAAGAAAGAGGTGG+CGG 0.594656 2:+64002409 MsG0280010082.01.T01:CDS
GCAAAGCAAGCCTTTGATGA+TGG 0.597901 2:+64005130 MsG0280010082.01.T01:CDS
CAAAGGCTTGCTTTGCCAGG+TGG 0.598428 2:-64005123 None:intergenic
TTGTAATTCATTCTCAGCAG+TGG 0.600849 2:-64004943 None:intergenic
AGCTGGCGATGAAAAGAAAG+AGG 0.603332 2:+64002403 MsG0280010082.01.T01:CDS
CTCTGTTGGGTACAAGAATG+TGG 0.607343 2:+64002016 MsG0280010082.01.T01:CDS
GATTCAGCAATATTAGTGGA+TGG 0.608560 2:-64002209 None:intergenic
AGAGCCAGACCCAATCGGAT+AGG 0.608618 2:-64004975 None:intergenic
CAACATAGACAAAGTTCTCA+CGG 0.612211 2:-64001041 None:intergenic
TATTAAGGAGTATAGGCAGA+AGG 0.612763 2:+64002124 MsG0280010082.01.T01:CDS
GAGATATTATCGGTATTTGG+CGG 0.623881 2:+64002373 MsG0280010082.01.T01:CDS
GATGGATGTTGAACTAAGTG+TGG 0.633294 2:+64001977 MsG0280010082.01.T01:CDS
TGATAACTATAACATTGATG+TGG 0.662452 2:+64005427 MsG0280010082.01.T01:three_prime_UTR
GTGGTGTGCAGAAATGGTGG+AGG 0.663377 2:+64001935 MsG0280010082.01.T01:intron
GACAAAGTTCTCACGGACGT+TGG 0.666574 2:-64001034 None:intergenic
TTGGGTACAAGAATGTGGTG+GGG 0.668378 2:+64002021 MsG0280010082.01.T01:CDS
TCTGATATCCCAGAAGATGG+TGG 0.672723 2:+64005244 MsG0280010082.01.T01:CDS
ATGGAAAGTGCAACTAAGAG+CGG 0.673290 2:+64005361 MsG0280010082.01.T01:CDS
TGGCGATGAAAAGAAAGAGG+TGG 0.688230 2:+64002406 MsG0280010082.01.T01:CDS
GGTCTAGAAGAGCTTCATGG+AGG 0.752840 2:+64002042 MsG0280010082.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACAAAAAAAAAATGTTA+TGG - Chr2:64003176-64003195 None:intergenic 10.0%
!! AAAAAAAAATGTTATGGTAT+TGG - Chr2:64003170-64003189 None:intergenic 15.0%
!! AAAAATGTATAAGTAAAACT+TGG + Chr2:64003320-64003339 MsG0280010082.01.T01:intron 15.0%
!! ATAATTTAAGAAAGTAAATG+TGG + Chr2:64001789-64001808 MsG0280010082.01.T01:intron 15.0%
!! TTACTTTCTTAAATTATTAC+CGG - Chr2:64001786-64001805 None:intergenic 15.0%
!! TTGAAATATATTGAAGAATA+AGG - Chr2:64004825-64004844 None:intergenic 15.0%
!!! AAACTTAATTTGAAACAATT+TGG - Chr2:64003145-64003164 None:intergenic 15.0%
!!! AGTAATTTTAAGGTAAATAT+TGG - Chr2:64004269-64004288 None:intergenic 15.0%
!!! ATAATAATATTGTCATTTCA+TGG - Chr2:64003415-64003434 None:intergenic 15.0%
!!! ATAATATGTTTTTCACTTAA+AGG + Chr2:64003259-64003278 MsG0280010082.01.T01:intron 15.0%
!!! ATTTTTTTTTTGTTTAGATC+TGG + Chr2:64003180-64003199 MsG0280010082.01.T01:intron 15.0%
!!! TTATTTGTTGTATACAATTA+AGG + Chr2:64003711-64003730 MsG0280010082.01.T01:intron 15.0%
!!! TTTTTTTCTTATACATTAGT+GGG + Chr2:64003003-64003022 MsG0280010082.01.T01:intron 15.0%
!! AAGTAATTTGAGTATTTGTT+TGG + Chr2:64002339-64002358 MsG0280010082.01.T01:intron 20.0%
!! ACTTATTTAAATTCATCTAC+TGG - Chr2:64002670-64002689 None:intergenic 20.0%
!! ATAATCAAATGAAACATGAA+CGG - Chr2:64003695-64003714 None:intergenic 20.0%
!! ATATTTCAACTTAGTATTAG+TGG + Chr2:64004836-64004855 MsG0280010082.01.T01:intron 20.0%
!! ATTTGTATCATAAGATTAGA+TGG + Chr2:64002853-64002872 MsG0280010082.01.T01:intron 20.0%
!! GAACTATAATGATGATAAAA+TGG - Chr2:64004044-64004063 None:intergenic 20.0%
!! TAACTTATGAAAATAGTGTA+TGG - Chr2:64002574-64002593 None:intergenic 20.0%
!! TGATAGAGAGATAATTTATA+GGG + Chr2:64003947-64003966 MsG0280010082.01.T01:intron 20.0%
!! TGCTAAAAGATAAACTATTT+AGG + Chr2:64003588-64003607 MsG0280010082.01.T01:intron 20.0%
!! TTTGTATCATAAGATTAGAT+GGG + Chr2:64002854-64002873 MsG0280010082.01.T01:intron 20.0%
!!! AAAATTCTAGAGAACTAAAT+TGG - Chr2:64001523-64001542 None:intergenic 20.0%
!!! AAATTCTAGAGAACTAAATT+GGG - Chr2:64001522-64001541 None:intergenic 20.0%
!!! AATTTGAATGATTTAGAATG+TGG + Chr2:64001916-64001935 MsG0280010082.01.T01:intron 20.0%
!!! ACTATTTTCATAAGTTATCT+TGG + Chr2:64002577-64002596 MsG0280010082.01.T01:intron 20.0%
!!! ATAGAATTTATCATTTTGGT+AGG + Chr2:64004675-64004694 MsG0280010082.01.T01:intron 20.0%
!!! ATTTGAAACAATTTGGTAAA+AGG - Chr2:64003138-64003157 None:intergenic 20.0%
!!! ATTTTTGTCAGAAACTAAAT+TGG + Chr2:64001676-64001695 MsG0280010082.01.T01:intron 20.0%
!!! CTTGATAGAATTTATCATTT+TGG + Chr2:64004671-64004690 MsG0280010082.01.T01:intron 20.0%
!!! CTTTTTTTCTTATACATTAG+TGG + Chr2:64003002-64003021 MsG0280010082.01.T01:intron 20.0%
!!! TATGAAAAGATAGTTGATAT+AGG + Chr2:64003793-64003812 MsG0280010082.01.T01:intron 20.0%
!!! TCAACTATCTTTTCATATTA+TGG - Chr2:64003790-64003809 None:intergenic 20.0%
!!! TTTGTTTTTGTGTTAGATTT+TGG + Chr2:64002309-64002328 MsG0280010082.01.T01:intron 20.0%
!!! TTTTTGTCAGAAACTAAATT+GGG + Chr2:64001677-64001696 MsG0280010082.01.T01:intron 20.0%
! AATTACGCAATATTACGATT+TGG - Chr2:64005088-64005107 None:intergenic 25.0%
! ACGTATATAAGACACTAAAT+TGG - Chr2:64005289-64005308 None:intergenic 25.0%
! AGAAAACTTGAAAAATTTCC+AGG + Chr2:64004859-64004878 MsG0280010082.01.T01:intron 25.0%
! ATTAGAGGAATTAATTTCTG+AGG + Chr2:64001637-64001656 MsG0280010082.01.T01:intron 25.0%
! ATTGAATGTTAAGCGTATTA+AGG + Chr2:64002109-64002128 MsG0280010082.01.T01:CDS 25.0%
! CATCTTATAATAAAACACTG+TGG - Chr2:64002234-64002253 None:intergenic 25.0%
! CTTGTAAGAATCTTCATTTA+GGG - Chr2:64005173-64005192 None:intergenic 25.0%
! GTAAGTAAGAAAGAGAAAAT+GGG - Chr2:64001202-64001221 None:intergenic 25.0%
! GTAATTATATGTATCAGTGT+TGG - Chr2:64001388-64001407 None:intergenic 25.0%
! GTATGTGAAAGTAAAGTAAT+GGG + Chr2:64001307-64001326 MsG0280010082.01.T01:intron 25.0%
! GTGATAGAGAGATAATTTAT+AGG + Chr2:64003946-64003965 MsG0280010082.01.T01:intron 25.0%
! TAATCACTTCAGAAAAAGTA+CGG + Chr2:64001737-64001756 MsG0280010082.01.T01:intron 25.0%
! TAGAAAAAATGCATCTGATA+GGG + Chr2:64003909-64003928 MsG0280010082.01.T01:intron 25.0%
! TCAAAACTTGACCAATATAA+TGG - Chr2:64004225-64004244 None:intergenic 25.0%
! TCCTAAAAGTTCCATTATAT+TGG + Chr2:64004211-64004230 MsG0280010082.01.T01:intron 25.0%
! TGATAACTATAACATTGATG+TGG + Chr2:64005427-64005446 MsG0280010082.01.T01:three_prime_UTR 25.0%
! TGTAAGTAAGAAAGAGAAAA+TGG - Chr2:64001203-64001222 None:intergenic 25.0%
! TGTACTAGAGAGTTTATTAA+GGG - Chr2:64002982-64003001 None:intergenic 25.0%
! TTAATGCATAACTAAGTTAC+TGG - Chr2:64003438-64003457 None:intergenic 25.0%
! TTAGAGGAATTAATTTCTGA+GGG + Chr2:64001638-64001657 MsG0280010082.01.T01:intron 25.0%
! TTATAGAATTTGACAACTCT+GGG + Chr2:64003659-64003678 MsG0280010082.01.T01:intron 25.0%
!! AAGTAAAGTAATGGGATTTA+TGG + Chr2:64001315-64001334 MsG0280010082.01.T01:intron 25.0%
!! GTAAATATTGGCTAAAAGAT+TGG - Chr2:64004257-64004276 None:intergenic 25.0%
!! TACGAATAACTTTTATGTCA+TGG + Chr2:64002918-64002937 MsG0280010082.01.T01:intron 25.0%
!! TTAGGCATAAGAAAGTATAA+GGG - Chr2:64002706-64002725 None:intergenic 25.0%
!! TTTCTAATTTTCCATTTCAG+AGG + Chr2:64005330-64005349 MsG0280010082.01.T01:intron 25.0%
!!! ACCAATATAATGGAACTTTT+AGG - Chr2:64004215-64004234 None:intergenic 25.0%
!!! ATATTGCGTAATTTGTTTTC+AGG + Chr2:64005095-64005114 MsG0280010082.01.T01:intron 25.0%
!!! TATTGCGTAATTTGTTTTCA+GGG + Chr2:64005096-64005115 MsG0280010082.01.T01:intron 25.0%
AAAAGTTATTCGTACATAGC+AGG - Chr2:64002912-64002931 None:intergenic 30.0%
AAGGAGATATTATCGGTATT+TGG + Chr2:64002370-64002389 MsG0280010082.01.T01:CDS 30.0%
AATACAATAAGCCGAGAAAT+TGG - Chr2:64004003-64004022 None:intergenic 30.0%
AATTGAATTGTGATGTCGTA+TGG - Chr2:64003292-64003311 None:intergenic 30.0%
ACAAGGATAGATGAACTTTA+TGG + Chr2:64002735-64002754 MsG0280010082.01.T01:intron 30.0%
ACCAGATTGAAATCTTACTT+AGG - Chr2:64004747-64004766 None:intergenic 30.0%
AGATAATGAATTCACCTGAA+AGG + Chr2:64005020-64005039 MsG0280010082.01.T01:intron 30.0%
AGCAGAAAGAAGAATCAAAA+GGG + Chr2:64002081-64002100 MsG0280010082.01.T01:CDS 30.0%
AGTGTCTTATATACGTTCTT+TGG + Chr2:64005293-64005312 MsG0280010082.01.T01:intron 30.0%
ATCCATGTATTACAAACCAA+TGG - Chr2:64005607-64005626 None:intergenic 30.0%
ATGTAAATTCGTTTACTGGT+GGG + Chr2:64004148-64004167 MsG0280010082.01.T01:intron 30.0%
CAGATTGAAATCTTACTTAG+GGG - Chr2:64004745-64004764 None:intergenic 30.0%
CATAATGTCATTGCAAATGT+TGG - Chr2:64002165-64002184 None:intergenic 30.0%
CCAGATTGAAATCTTACTTA+GGG - Chr2:64004746-64004765 None:intergenic 30.0%
CCTAAATGAAGATTCTTACA+AGG + Chr2:64005171-64005190 MsG0280010082.01.T01:CDS 30.0%
CCTTGTAAGAATCTTCATTT+AGG - Chr2:64005174-64005193 None:intergenic 30.0%
CTAGAAAAAATGCATCTGAT+AGG + Chr2:64003908-64003927 MsG0280010082.01.T01:intron 30.0%
GGTATGTGAAAGTAAAGTAA+TGG + Chr2:64001306-64001325 MsG0280010082.01.T01:intron 30.0%
GTGTACTAGAGAGTTTATTA+AGG - Chr2:64002983-64003002 None:intergenic 30.0%
GTTATAGAATTTGACAACTC+TGG + Chr2:64003658-64003677 MsG0280010082.01.T01:intron 30.0%
TATCAGAAGTCCATAAAGTA+AGG - Chr2:64005231-64005250 None:intergenic 30.0%
TATGTTTGGGTCATTATTAG+AGG + Chr2:64001622-64001641 MsG0280010082.01.T01:intron 30.0%
TATTTGTTTGGATGTAGGAA+AGG + Chr2:64002351-64002370 MsG0280010082.01.T01:intron 30.0%
TGATTCTCTGTGTCATATTA+TGG + Chr2:64003465-64003484 MsG0280010082.01.T01:intron 30.0%
TGTAGGAAAGGAGATATTAT+CGG + Chr2:64002363-64002382 MsG0280010082.01.T01:intron 30.0%
TTAGATTAGCACCAAAACTA+TGG - Chr2:64003091-64003110 None:intergenic 30.0%
TTGAGTATTTGTTTGGATGT+AGG + Chr2:64002346-64002365 MsG0280010082.01.T01:intron 30.0%
TTGGTATTGCATGAATACTT+TGG + Chr2:64003339-64003358 MsG0280010082.01.T01:intron 30.0%
TTGTGTAACAATAACACCAT+TGG + Chr2:64005588-64005607 MsG0280010082.01.T01:three_prime_UTR 30.0%
! ACTTTTATGTCATGGCTTAT+TGG + Chr2:64002926-64002945 MsG0280010082.01.T01:intron 30.0%
! AGAAAGTATAAGGGTCTATT+TGG - Chr2:64002697-64002716 None:intergenic 30.0%
! ATATCTAAACTAGTCTCTTC+CGG + Chr2:64001578-64001597 MsG0280010082.01.T01:intron 30.0%
! ATTCAAACTTCTTGTTTGTG+AGG + Chr2:64002269-64002288 MsG0280010082.01.T01:intron 30.0%
! CTTTTATGTCATGGCTTATT+GGG + Chr2:64002927-64002946 MsG0280010082.01.T01:intron 30.0%
! GGCAAGAAGCATAAATATAA+AGG - Chr2:64003039-64003058 None:intergenic 30.0%
! GTTAGGCATAAGAAAGTATA+AGG - Chr2:64002707-64002726 None:intergenic 30.0%
! TGGATTTATGTCCATAGTTT+TGG + Chr2:64003077-64003096 MsG0280010082.01.T01:intron 30.0%
! TTAAGCGTATTAAGGAGTAT+AGG + Chr2:64002117-64002136 MsG0280010082.01.T01:CDS 30.0%
!!! AGTTCTCTAGAATTTTCTTG+CGG + Chr2:64001527-64001546 MsG0280010082.01.T01:intron 30.0%
!!! GAAGTTTTGAACAGTGTTTA+TGG + Chr2:64001120-64001139 MsG0280010082.01.T01:intron 30.0%
!!! TAGTTGCACTTTCCATTTTT+TGG - Chr2:64005357-64005376 None:intergenic 30.0%
AAAATGGTCACTAGTGCAAA+AGG - Chr2:64004028-64004047 None:intergenic 35.0%
AAATGGGTAGGAGTAAAAGT+TGG - Chr2:64001186-64001205 None:intergenic 35.0%
AATTATTACCGGTGTTTACG+CGG - Chr2:64001775-64001794 None:intergenic 35.0%
ACCTTCAAGAATCCATTTAC+TGG + Chr2:64005658-64005677 MsG0280010082.01.T01:three_prime_UTR 35.0%
ATGAATTCACCTGAAAGGTA+CGG + Chr2:64005025-64005044 MsG0280010082.01.T01:intron 35.0%
ATTTATGCTTCTTGCCTTGT+TGG + Chr2:64003043-64003062 MsG0280010082.01.T01:intron 35.0%
CAACAGTTGAAATCTTTGTC+TGG - Chr2:64004890-64004909 None:intergenic 35.0%
CAACATAGACAAAGTTCTCA+CGG - Chr2:64001044-64001063 None:intergenic 35.0%
CATGTAAATTCGTTTACTGG+TGG + Chr2:64004147-64004166 MsG0280010082.01.T01:intron 35.0%
CATTTCAGAGGACCAAAAAA+TGG + Chr2:64005342-64005361 MsG0280010082.01.T01:intron 35.0%
CCAATTTGGTACCAATTTCT+CGG + Chr2:64003989-64004008 MsG0280010082.01.T01:intron 35.0%
CCCTAAGTAAGATTTCAATC+TGG + Chr2:64004743-64004762 MsG0280010082.01.T01:intron 35.0%
CGAGAAATTGGTACCAAATT+GGG - Chr2:64003991-64004010 None:intergenic 35.0%
GAAAGAAAAACATGAAAGCG+AGG - Chr2:64004455-64004474 None:intergenic 35.0%
GAAGATGTTTGTTCCTAAGA+GGG - Chr2:64003367-64003386 None:intergenic 35.0%
GAAGTTGAAAAAAGTTCAGC+AGG - Chr2:64005493-64005512 None:intergenic 35.0%
GAGATATTATCGGTATTTGG+CGG + Chr2:64002373-64002392 MsG0280010082.01.T01:CDS 35.0%
GAGCAGAAAGAAGAATCAAA+AGG + Chr2:64002080-64002099 MsG0280010082.01.T01:CDS 35.0%
GATTCAGCAATATTAGTGGA+TGG - Chr2:64002212-64002231 None:intergenic 35.0%
GGATCTTAATGGGGATAATA+AGG - Chr2:64002891-64002910 None:intergenic 35.0%
GTAAGAAAGAGAAAATGGGT+AGG - Chr2:64001198-64001217 None:intergenic 35.0%
GTACATAGCAGGATCTTAAT+GGG - Chr2:64002901-64002920 None:intergenic 35.0%
GTCACAAATCTTTCCCAATT+TGG + Chr2:64003975-64003994 MsG0280010082.01.T01:intron 35.0%
GTTTGTGTTAATGAGAAACG+AGG + Chr2:64005056-64005075 MsG0280010082.01.T01:intron 35.0%
TAACACTGAGCTCAATTTCT+TGG - Chr2:64003856-64003875 None:intergenic 35.0%
TAATGACTGAATCTCTTCAC+AGG + Chr2:64002793-64002812 MsG0280010082.01.T01:intron 35.0%
TACATAGCAGGATCTTAATG+GGG - Chr2:64002900-64002919 None:intergenic 35.0%
TATACGTTCTTTGGTCTAAC+TGG + Chr2:64005302-64005321 MsG0280010082.01.T01:intron 35.0%
TATGACACAGAGAATCATGA+TGG - Chr2:64003462-64003481 None:intergenic 35.0%
TCGAATGTAATCACTTGTGT+TGG + Chr2:64001812-64001831 MsG0280010082.01.T01:intron 35.0%
TCGCATGTAAATTCGTTTAC+TGG + Chr2:64004144-64004163 MsG0280010082.01.T01:intron 35.0%
TGAAGATGTTTGTTCCTAAG+AGG - Chr2:64003368-64003387 None:intergenic 35.0%
TGTCGAACATCTTCAATTCA+GGG + Chr2:64001852-64001871 MsG0280010082.01.T01:intron 35.0%
TGTGGATTCAGCAATATTAG+TGG - Chr2:64002216-64002235 None:intergenic 35.0%
TGTTATCCAAACATGACCTA+AGG - Chr2:64002512-64002531 None:intergenic 35.0%
TTAACCTGTTGTAGACGATT+TGG + Chr2:64003493-64003512 MsG0280010082.01.T01:intron 35.0%
TTCTCTGTGTCATATTATGG+AGG + Chr2:64003468-64003487 MsG0280010082.01.T01:intron 35.0%
! AGTCTCTCACAATTTTCTAG+CGG - Chr2:64001703-64001722 None:intergenic 35.0%
! CGTGAGACTGAGTAATTTTA+AGG - Chr2:64004279-64004298 None:intergenic 35.0%
! GGAAAAAGTGTGTCAAATAG+CGG + Chr2:64003609-64003628 MsG0280010082.01.T01:intron 35.0%
! TATTAAGGAGTATAGGCAGA+AGG + Chr2:64002124-64002143 MsG0280010082.01.T01:CDS 35.0%
! TCTGTCACTTAAAGCATATC+AGG + Chr2:64002433-64002452 MsG0280010082.01.T01:CDS 35.0%
! TTTTAAACCTATGCCAACCA+AGG - Chr2:64004775-64004794 None:intergenic 35.0%
!! CACCATTGGTTTGTAATACA+TGG + Chr2:64005602-64005621 MsG0280010082.01.T01:three_prime_UTR 35.0%
!!! CATTTTTTGGTCCTCTGAAA+TGG - Chr2:64005344-64005363 None:intergenic 35.0%
AAATGAAACATGAACGGCCA+AGG - Chr2:64003689-64003708 None:intergenic 40.0%
AATGAAGAAACTGGCGAAGA+TGG + Chr2:64001959-64001978 MsG0280010082.01.T01:CDS 40.0%
ACATACCCACACTCTTGTAA+TGG - Chr2:64001293-64001312 None:intergenic 40.0%
ACATCTTCAATTCAGGGCTT+TGG + Chr2:64001858-64001877 MsG0280010082.01.T01:intron 40.0%
ACCGGGGACAAATTATGTTT+GGG + Chr2:64001609-64001628 MsG0280010082.01.T01:intron 40.0%
ACTTCTGATATCCCAGAAGA+TGG + Chr2:64005241-64005260 MsG0280010082.01.T01:CDS 40.0%
AGTATCTTACCACCATCTTC+TGG - Chr2:64005256-64005275 None:intergenic 40.0%
AGTGTCTGTTGAAAACCAGT+TGG - Chr2:64004396-64004415 None:intergenic 40.0%
AGTTGAAATCTTTGTCTGGC+TGG - Chr2:64004886-64004905 None:intergenic 40.0%
AGTTTGCCTTAGGTCATGTT+TGG + Chr2:64002503-64002522 MsG0280010082.01.T01:intron 40.0%
ATTGACCCATTACAAGAGTG+TGG + Chr2:64001284-64001303 MsG0280010082.01.T01:intron 40.0%
CATACCCACACTCTTGTAAT+GGG - Chr2:64001292-64001311 None:intergenic 40.0%
CCAAATGAAGTTCTCCAACA+AGG - Chr2:64003060-64003079 None:intergenic 40.0%
CCGAGAAATTGGTACCAAAT+TGG - Chr2:64003992-64004011 None:intergenic 40.0%
CCTTGTTGGAGAACTTCATT+TGG + Chr2:64003057-64003076 MsG0280010082.01.T01:intron 40.0%
CGTACATAGCAGGATCTTAA+TGG - Chr2:64002902-64002921 None:intergenic 40.0%
GATGGATGTTGAACTAAGTG+TGG + Chr2:64001977-64001996 MsG0280010082.01.T01:CDS 40.0%
GCACAAGTACAGATGAACTT+GGG - Chr2:64004477-64004496 None:intergenic 40.0%
GGTCACGATGAAGATGAATT+GGG + Chr2:64005382-64005401 MsG0280010082.01.T01:CDS 40.0%
GTATCTTACCACCATCTTCT+GGG - Chr2:64005255-64005274 None:intergenic 40.0%
GTGTCGAACATCTTCAATTC+AGG + Chr2:64001851-64001870 MsG0280010082.01.T01:intron 40.0%
GTGTCTGTTGAAAACCAGTT+GGG - Chr2:64004395-64004414 None:intergenic 40.0%
TACCGGGGACAAATTATGTT+TGG + Chr2:64001608-64001627 MsG0280010082.01.T01:intron 40.0%
TAGAATGTGGTGTGCAGAAA+TGG + Chr2:64001929-64001948 MsG0280010082.01.T01:intron 40.0%
TATTTGGCGGAATTCAAAGC+TGG + Chr2:64002386-64002405 MsG0280010082.01.T01:CDS 40.0%
TCACAGGCTTGCAATATATC+AGG + Chr2:64002809-64002828 MsG0280010082.01.T01:intron 40.0%
TCAGTGCTAATTGTGAGTCA+TGG + Chr2:64004562-64004581 MsG0280010082.01.T01:intron 40.0%
TCCAAAACAGTCTCACAACA+AGG + Chr2:64002639-64002658 MsG0280010082.01.T01:intron 40.0%
TCGTAACATGAGTTTGCCTT+AGG + Chr2:64002493-64002512 MsG0280010082.01.T01:intron 40.0%
TCTCTTCCGGTATTTCATAC+CGG + Chr2:64001591-64001610 MsG0280010082.01.T01:intron 40.0%
TCTGTACTTGTGCATTCTCA+TGG + Chr2:64004484-64004503 MsG0280010082.01.T01:intron 40.0%
TGCACAAGTACAGATGAACT+TGG - Chr2:64004478-64004497 None:intergenic 40.0%
TGCGAGACAACCTTACTTTA+TGG + Chr2:64005218-64005237 MsG0280010082.01.T01:CDS 40.0%
TTTATGACCTTACAGCCACT+GGG + Chr2:64004112-64004131 MsG0280010082.01.T01:intron 40.0%
! AATTTAGAGCCAGACCCAAT+CGG - Chr2:64004983-64005002 None:intergenic 40.0%
! ACCCAAACATAATTTGTCCC+CGG - Chr2:64001613-64001632 None:intergenic 40.0%
! AGCGAAACTTGTTCTCTGTT+GGG + Chr2:64002003-64002022 MsG0280010082.01.T01:CDS 40.0%
! ATGGAAAGTGCAACTAAGAG+CGG + Chr2:64005361-64005380 MsG0280010082.01.T01:CDS 40.0%
! TGAATTCACCTGAAAGGTAC+GGG + Chr2:64005026-64005045 MsG0280010082.01.T01:intron 40.0%
! TTGACCCATTACAAGAGTGT+GGG + Chr2:64001285-64001304 MsG0280010082.01.T01:intron 40.0%
! TTTTATGACCTTACAGCCAC+TGG + Chr2:64004111-64004130 MsG0280010082.01.T01:intron 40.0%
!! ACCTTGTTGTGAGACTGTTT+TGG - Chr2:64002643-64002662 None:intergenic 40.0%
!! GCTGAAGTTCTGAAAACAGA+GGG + Chr2:64003881-64003900 MsG0280010082.01.T01:intron 40.0%
!! TGCTGAAGTTCTGAAAACAG+AGG + Chr2:64003880-64003899 MsG0280010082.01.T01:intron 40.0%
!! TTCTGAGACACCATCATCAA+AGG - Chr2:64005143-64005162 None:intergenic 40.0%
AATGTGGTGTGCAGAAATGG+TGG + Chr2:64001932-64001951 MsG0280010082.01.T01:intron 45.0%
ACCAACACATCCTATCCGAT+TGG + Chr2:64004965-64004984 MsG0280010082.01.T01:CDS 45.0%
AGATTAAGCACCATGCAAGG+AGG + Chr2:64003822-64003841 MsG0280010082.01.T01:intron 45.0%
AGCAGATTAAGCACCATGCA+AGG + Chr2:64003819-64003838 MsG0280010082.01.T01:intron 45.0%
AGCTGGCGATGAAAAGAAAG+AGG + Chr2:64002403-64002422 MsG0280010082.01.T01:CDS 45.0%
ATCTGATAGGGAGCAGTTGT+GGG + Chr2:64003921-64003940 MsG0280010082.01.T01:intron 45.0%
CAATCCTACGATCTAACTCG+CGG - Chr2:64004086-64004105 None:intergenic 45.0%
CATTCTCATGGCATCTAGTG+GGG + Chr2:64004496-64004515 MsG0280010082.01.T01:intron 45.0%
CCAACACATCCTATCCGATT+GGG + Chr2:64004966-64004985 MsG0280010082.01.T01:CDS 45.0%
CGATGAAAAGAAAGAGGTGG+CGG + Chr2:64002409-64002428 MsG0280010082.01.T01:CDS 45.0%
CGGTCACGATGAAGATGAAT+TGG + Chr2:64005381-64005400 MsG0280010082.01.T01:CDS 45.0%
CTCTGTTGGGTACAAGAATG+TGG + Chr2:64002016-64002035 MsG0280010082.01.T01:CDS 45.0%
CTCTTCCGGTATTTCATACC+GGG + Chr2:64001592-64001611 MsG0280010082.01.T01:intron 45.0%
CTGTTGAAAACCAGTTGGGA+GGG - Chr2:64004391-64004410 None:intergenic 45.0%
GAACAAGCTGAACGCTATGA+TGG + Chr2:64001075-64001094 MsG0280010082.01.T01:CDS 45.0%
GCAAAGCAAGCCTTTGATGA+TGG + Chr2:64005130-64005149 MsG0280010082.01.T01:CDS 45.0%
GCAGAGAGAAATTTCAGCCA+TGG + Chr2:64001002-64001021 MsG0280010082.01.T01:exon 45.0%
GCATTCTCATGGCATCTAGT+GGG + Chr2:64004495-64004514 MsG0280010082.01.T01:intron 45.0%
GCTTGCAAGATTGCTGAGAT+CGG + Chr2:64004174-64004193 MsG0280010082.01.T01:intron 45.0%
GTTGGGTACAAGAATGTGGT+GGG + Chr2:64002020-64002039 MsG0280010082.01.T01:CDS 45.0%
TAAACCTATGCCAACCAAGG+TGG - Chr2:64004772-64004791 None:intergenic 45.0%
TCATCTATCCTTGTCAGCAG+CGG - Chr2:64002729-64002748 None:intergenic 45.0%
TCTGATATCCCAGAAGATGG+TGG + Chr2:64005244-64005263 MsG0280010082.01.T01:CDS 45.0%
TCTGTTGAAAACCAGTTGGG+AGG - Chr2:64004392-64004411 None:intergenic 45.0%
TCTTCCGGTATTTCATACCG+GGG + Chr2:64001593-64001612 MsG0280010082.01.T01:intron 45.0%
TGCATTCTCATGGCATCTAG+TGG + Chr2:64004494-64004513 MsG0280010082.01.T01:intron 45.0%
TGGCGATGAAAAGAAAGAGG+TGG + Chr2:64002406-64002425 MsG0280010082.01.T01:CDS 45.0%
TGTTGGGTACAAGAATGTGG+TGG + Chr2:64002019-64002038 MsG0280010082.01.T01:CDS 45.0%
TTCAGCAGGCTTCACTACAT+TGG - Chr2:64005479-64005498 None:intergenic 45.0%
TTGGGTACAAGAATGTGGTG+GGG + Chr2:64002021-64002040 MsG0280010082.01.T01:CDS 45.0%
TTGTCCCCGGTATGAAATAC+CGG - Chr2:64001600-64001619 None:intergenic 45.0%
TTTCAATCTGGTGACCACCT+TGG + Chr2:64004755-64004774 MsG0280010082.01.T01:intron 45.0%
! AAGAGTGTGCCTATGAAGCA+CGG + Chr2:64001347-64001366 MsG0280010082.01.T01:intron 45.0%
! GAGCGAAACTTGTTCTCTGT+TGG + Chr2:64002002-64002021 MsG0280010082.01.T01:CDS 45.0%
! TAAGGAGTATAGGCAGAAGG+TGG + Chr2:64002127-64002146 MsG0280010082.01.T01:CDS 45.0%
!! AAGTTCTGAAAACAGAGGGC+AGG + Chr2:64003885-64003904 MsG0280010082.01.T01:intron 45.0%
!! ACTTGTGTTGGTGTCAGACA+TGG + Chr2:64001824-64001843 MsG0280010082.01.T01:intron 45.0%
!! GAATACTTTGGTGCCCTCTT+AGG + Chr2:64003351-64003370 MsG0280010082.01.T01:intron 45.0%
!! TCAGGGCTTTGGTGTTTCAT+AGG + Chr2:64001869-64001888 MsG0280010082.01.T01:intron 45.0%
!! TGATGATGGTGTCTCAGAAC+TGG + Chr2:64005144-64005163 MsG0280010082.01.T01:CDS 45.0%
AAAGTTCTCACGGACGTTGG+TGG - Chr2:64001034-64001053 None:intergenic 50.0%
AAGACCGCGAGTTAGATCGT+AGG + Chr2:64004079-64004098 MsG0280010082.01.T01:intron 50.0%
AATCTGGTGACCACCTTGGT+TGG + Chr2:64004759-64004778 MsG0280010082.01.T01:intron 50.0%
AATCTTTGTCTGGCTGGACC+TGG - Chr2:64004880-64004899 None:intergenic 50.0%
ACATCCTATCCGATTGGGTC+TGG + Chr2:64004971-64004990 MsG0280010082.01.T01:CDS 50.0%
ACGGATACGGACAGAAACAC+CGG - Chr2:64001462-64001481 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - Chr2:64000954-64000973 None:intergenic 50.0%
AGAGTGTGCCTATGAAGCAC+GGG + Chr2:64001348-64001367 MsG0280010082.01.T01:intron 50.0%
ATAACGCCACAGCACTGTAC+CGG - Chr2:64003643-64003662 None:intergenic 50.0%
CAGACACAGCCTATGAAGCA+CGG - Chr2:64001481-64001500 None:intergenic 50.0%
CAGCCTATGAAGCACGGATA+CGG - Chr2:64001475-64001494 None:intergenic 50.0%
CATCTGATAGGGAGCAGTTG+TGG + Chr2:64003920-64003939 MsG0280010082.01.T01:intron 50.0%
CATGAAAGCGAGGAGCTTGT+TGG - Chr2:64004445-64004464 None:intergenic 50.0%
CCCAATCGGATAGGATGTGT+TGG - Chr2:64004969-64004988 None:intergenic 50.0%
CGCGAGTTAGATCGTAGGAT+TGG + Chr2:64004084-64004103 MsG0280010082.01.T01:intron 50.0%
GACAAAGTTCTCACGGACGT+TGG - Chr2:64001037-64001056 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - Chr2:64000955-64000974 None:intergenic 50.0%
GGTCTAGAAGAGCTTCATGG+AGG + Chr2:64002042-64002061 MsG0280010082.01.T01:CDS 50.0%
GGTGGAGGCAATGAAGAAAC+TGG + Chr2:64001950-64001969 MsG0280010082.01.T01:CDS 50.0%
GTGGCCAAATCGTCTACAAC+AGG - Chr2:64003500-64003519 None:intergenic 50.0%
GTTCAAAGTCAGCTGTGCTC+TGG - Chr2:64003558-64003577 None:intergenic 50.0%
TATCCTTGTCAGCAGCGGTT+AGG - Chr2:64002724-64002743 None:intergenic 50.0%
TCAAATAGCGGCTAATGCGC+CGG + Chr2:64003621-64003640 MsG0280010082.01.T01:intron 50.0%
TCAGGGGGTTAGGTGTCAAT+GGG + Chr2:64004539-64004558 MsG0280010082.01.T01:intron 50.0%
TCGCAACAGCTGCATGATCA+AGG - Chr2:64005203-64005222 None:intergenic 50.0%
TGAAAACCAGTTGGGAGGGA+GGG - Chr2:64004387-64004406 None:intergenic 50.0%
TGACAACTCTGGGTTTGCCT+TGG + Chr2:64003669-64003688 MsG0280010082.01.T01:intron 50.0%
TGGGGTCTAGAAGAGCTTCA+TGG + Chr2:64002039-64002058 MsG0280010082.01.T01:CDS 50.0%
TGTCCGTATCCGTGCTTCAT+AGG + Chr2:64001469-64001488 MsG0280010082.01.T01:intron 50.0%
TTGAAAACCAGTTGGGAGGG+AGG - Chr2:64004388-64004407 None:intergenic 50.0%
! CATCAAAGGCTTGCTTTGCC+AGG - Chr2:64005129-64005148 None:intergenic 50.0%
! CATTTTCGCCCGTACCTTTC+AGG - Chr2:64005037-64005056 None:intergenic 50.0%
ACGGACAGAAACACCGGACA+CGG - Chr2:64001456-64001475 None:intergenic 55.0%
AGAGCCAGACCCAATCGGAT+AGG - Chr2:64004978-64004997 None:intergenic 55.0%
AGCTGTGTATGTGCCGTGTC+CGG + Chr2:64001440-64001459 MsG0280010082.01.T01:intron 55.0%
ATGCCTAACCGCTGCTGACA+AGG + Chr2:64002718-64002737 MsG0280010082.01.T01:intron 55.0%
ATGCGAGTTAGATCGCCCAG+TGG - Chr2:64004130-64004149 None:intergenic 55.0%
CAGCTGCGGTTTGACAACAG+TGG - Chr2:64003519-64003538 None:intergenic 55.0%
CATCACTGCCGCGTAAACAC+CGG + Chr2:64001764-64001783 MsG0280010082.01.T01:intron 55.0%
CATGGCATCTAGTGGGGTTG+CGG + Chr2:64004502-64004521 MsG0280010082.01.T01:intron 55.0%
GCACCATGCAAGGAGGTTTG+TGG + Chr2:64003829-64003848 MsG0280010082.01.T01:intron 55.0%
GGACCACAAACCTCCTTGCA+TGG - Chr2:64003835-64003854 None:intergenic 55.0%
GGAGAGAGAGAGAGAGAGAG+AGG - Chr2:64004340-64004359 None:intergenic 55.0%
GGAGTATAGGCAGAAGGTGG+AGG + Chr2:64002130-64002149 MsG0280010082.01.T01:CDS 55.0%
GTATAGGCAGAAGGTGGAGG+CGG + Chr2:64002133-64002152 MsG0280010082.01.T01:CDS 55.0%
GTCAGGGGGTTAGGTGTCAA+TGG + Chr2:64004538-64004557 MsG0280010082.01.T01:intron 55.0%
GTGACCACCTTGGTTGGCAT+AGG + Chr2:64004765-64004784 MsG0280010082.01.T01:intron 55.0%
GTGGTGTGCAGAAATGGTGG+AGG + Chr2:64001935-64001954 MsG0280010082.01.T01:intron 55.0%
TAGATCGCCCAGTGGCTGTA+AGG - Chr2:64004122-64004141 None:intergenic 55.0%
TGATAGGGAGCAGTTGTGGG+TGG + Chr2:64003924-64003943 MsG0280010082.01.T01:intron 55.0%
TTGTCAAACCGCAGCTGCAG+CGG + Chr2:64003522-64003541 MsG0280010082.01.T01:intron 55.0%
! CAAAGGCTTGCTTTGCCAGG+TGG - Chr2:64005126-64005145 None:intergenic 55.0%
! GACGTTGGTGGAAGAAGCCA+TGG - Chr2:64001022-64001041 None:intergenic 55.0%
! GTAGAGTGCCCGTGCTTCAT+AGG - Chr2:64001359-64001378 None:intergenic 55.0%
AAACCAGTTGGGAGGGAGGG+AGG - Chr2:64004384-64004403 None:intergenic 60.0%
AACCAGTTGGGAGGGAGGGA+GGG - Chr2:64004383-64004402 None:intergenic 60.0%
CTATAGCACCGCTGCAGCTG+CGG - Chr2:64003533-64003552 None:intergenic 60.0%
GCATCTAGTGGGGTTGCGGT+AGG + Chr2:64004506-64004525 MsG0280010082.01.T01:intron 60.0%
GGGTTGCGGTAGGTGGTAGT+GGG + Chr2:64004516-64004535 MsG0280010082.01.T01:intron 60.0%
TCTAGTGGGGTTGCGGTAGG+TGG + Chr2:64004509-64004528 MsG0280010082.01.T01:intron 60.0%
! AATGCGCCGGTACAGTGCTG+TGG + Chr2:64003634-64003653 MsG0280010082.01.T01:intron 60.0%
!! CGGTAGGTGGTAGTGGGTCA+GGG + Chr2:64004522-64004541 MsG0280010082.01.T01:intron 60.0%
!! GGTAGGTGGTAGTGGGTCAG+GGG + Chr2:64004523-64004542 MsG0280010082.01.T01:intron 60.0%
!! GTAGGTGGTAGTGGGTCAGG+GGG + Chr2:64004524-64004543 MsG0280010082.01.T01:intron 60.0%
!! TGGTAGTGGGTCAGGGGGTT+AGG + Chr2:64004529-64004548 MsG0280010082.01.T01:intron 60.0%
!! TGTTTTCAGGGCCTGCCACC+TGG + Chr2:64005108-64005127 MsG0280010082.01.T01:intron 60.0%
AGTTGGGAGGGAGGGAGGGA+GGG - Chr2:64004379-64004398 None:intergenic 65.0%
GGGGTTGCGGTAGGTGGTAG+TGG + Chr2:64004515-64004534 MsG0280010082.01.T01:intron 65.0%
! GGCTTGCTTTGCCAGGTGGC+AGG - Chr2:64005122-64005141 None:intergenic 65.0%
!! GCGGTAGGTGGTAGTGGGTC+AGG + Chr2:64004521-64004540 MsG0280010082.01.T01:intron 65.0%
CAGTTGGGAGGGAGGGAGGG+AGG - Chr2:64004380-64004399 None:intergenic 70.0%
CTCCCTCCCTCCCTCCCAAC+TGG + Chr2:64004378-64004397 MsG0280010082.01.T01:intron 70.0%
AGGGAGGGAGGGAGGGAGGG+AGG - Chr2:64004360-64004379 None:intergenic 75.0%
GAGGGAGGGAGGGAGGGAGG+GGG - Chr2:64004361-64004380 None:intergenic 75.0%
GGAGGGAGGGAGGGAGGGAG+GGG - Chr2:64004362-64004381 None:intergenic 75.0%
GGGAGGGAGGGAGGGAGGGA+GGG - Chr2:64004363-64004382 None:intergenic 75.0%
TGGGAGGGAGGGAGGGAGGG+AGG - Chr2:64004376-64004395 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 64000947 64005680 64000947 ID=MsG0280010082.01;Name=MsG0280010082.01
Chr2 mRNA 64000947 64005680 64000947 ID=MsG0280010082.01.T01;Parent=MsG0280010082.01;Name=MsG0280010082.01.T01;_AED=0.46;_eAED=0.46;_QI=74|0.6|0.66|1|1|1|6|269|245
Chr2 exon 64000947 64001096 64000947 ID=MsG0280010082.01.T01:exon:25422;Parent=MsG0280010082.01.T01
Chr2 exon 64001946 64002235 64001946 ID=MsG0280010082.01.T01:exon:25423;Parent=MsG0280010082.01.T01
Chr2 exon 64002368 64002454 64002368 ID=MsG0280010082.01.T01:exon:25424;Parent=MsG0280010082.01.T01
Chr2 exon 64004933 64005006 64004933 ID=MsG0280010082.01.T01:exon:25425;Parent=MsG0280010082.01.T01
Chr2 exon 64005117 64005265 64005117 ID=MsG0280010082.01.T01:exon:25426;Parent=MsG0280010082.01.T01
Chr2 exon 64005350 64005680 64005350 ID=MsG0280010082.01.T01:exon:25427;Parent=MsG0280010082.01.T01
Chr2 five_prime_UTR 64000947 64001020 64000947 ID=MsG0280010082.01.T01:five_prime_utr;Parent=MsG0280010082.01.T01
Chr2 CDS 64001021 64001096 64001021 ID=MsG0280010082.01.T01:cds;Parent=MsG0280010082.01.T01
Chr2 CDS 64001946 64002235 64001946 ID=MsG0280010082.01.T01:cds;Parent=MsG0280010082.01.T01
Chr2 CDS 64002368 64002454 64002368 ID=MsG0280010082.01.T01:cds;Parent=MsG0280010082.01.T01
Chr2 CDS 64004933 64005006 64004933 ID=MsG0280010082.01.T01:cds;Parent=MsG0280010082.01.T01
Chr2 CDS 64005117 64005265 64005117 ID=MsG0280010082.01.T01:cds;Parent=MsG0280010082.01.T01
Chr2 CDS 64005350 64005411 64005350 ID=MsG0280010082.01.T01:cds;Parent=MsG0280010082.01.T01
Chr2 three_prime_UTR 64005412 64005680 64005412 ID=MsG0280010082.01.T01:three_prime_utr;Parent=MsG0280010082.01.T01
Gene Sequence

>MsG0280010082.01.T01

ATGGCTTCTTCCACCAACGTCCGTGAGAACTTTGTCTATGTTGCAAAGCTAGCAGAACAAGCTGAACGCTATGATGAAATGGTGGAGGCAATGAAGAAACTGGCGAAGATGGATGTTGAACTAAGTGTGGAAGAGCGAAACTTGTTCTCTGTTGGGTACAAGAATGTGGTGGGGTCTAGAAGAGCTTCATGGAGGATCTTATCATCAATTGAGCAGAAAGAAGAATCAAAAGGGAATGAATTGAATGTTAAGCGTATTAAGGAGTATAGGCAGAAGGTGGAGGCGGAGCTTTCCAACATTTGCAATGACATTATGATTATTATTGATGAGCATCTTATTCCATCCACTAATATTGCTGAATCCACAGAAAGGAGATATTATCGGTATTTGGCGGAATTCAAAGCTGGCGATGAAAAGAAAGAGGTGGCGGATCTGTCACTTAAAGCATATCAGACAGCTTCTGCCACTGCTGAGAATGAATTACAACCAACACATCCTATCCGATTGGGTCTGGCTCTAAATTCTCAGGCCTGCCACCTGGCAAAGCAAGCCTTTGATGATGGTGTCTCAGAACTGGATACCCTAAATGAAGATTCTTACAAGGACAGTACCTTGATCATGCAGCTGTTGCGAGACAACCTTACTTTATGGACTTCTGATATCCCAGAAGATGGTGAGGACCAAAAAATGGAAAGTGCAACTAAGAGCGGTCACGATGAAGATGAATTGGGTCGCTAA

Protein sequence

>MsG0280010082.01.T01

MASSTNVRENFVYVAKLAEQAERYDEMVEAMKKLAKMDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIKEYRQKVEAELSNICNDIMIIIDEHLIPSTNIAESTERRYYRYLAEFKAGDEKKEVADLSLKAYQTASATAENELQPTHPIRLGLALNSQACHLAKQAFDDGVSELDTLNEDSYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMESATKSGHDEDELGR*