AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043634.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043634.01.T01 MTR_8g038880 95.979 572 23 0 1 572 1 572 0.0 1092
MsG0880043634.01.T01 MTR_3g014790 66.243 551 181 3 15 563 13 560 0.0 727
MsG0880043634.01.T01 MTR_0294s0020 48.435 543 246 8 19 550 30 549 1.26e-174 506
MsG0880043634.01.T01 MTR_3g005010 47.689 541 250 7 19 551 29 544 1.90e-174 505
MsG0880043634.01.T01 MTR_4g033315 48.066 543 250 8 19 550 30 551 1.45e-172 501
MsG0880043634.01.T01 MTR_4g033310 48.066 543 250 8 19 550 30 551 1.45e-172 501
MsG0880043634.01.T01 MTR_4g033325 48.066 543 248 6 19 550 30 549 1.42e-171 498
MsG0880043634.01.T01 MTR_3g069420 43.750 560 287 7 22 566 36 582 4.37e-166 485
MsG0880043634.01.T01 MTR_4g033330 49.046 524 235 7 20 532 31 533 4.74e-166 483
MsG0880043634.01.T01 MTR_4g033375 49.794 486 214 7 19 494 31 496 1.62e-162 473
MsG0880043634.01.T01 MTR_7g065080 40.411 584 310 6 3 570 17 578 2.05e-162 476
MsG0880043634.01.T01 MTR_3g069500 42.419 554 282 7 20 556 35 568 2.62e-161 473
MsG0880043634.01.T01 MTR_4g033395 50.000 486 213 6 19 494 31 496 1.14e-159 465
MsG0880043634.01.T01 MTR_4g019580 40.949 569 294 7 22 564 38 590 1.89e-159 468
MsG0880043634.01.T01 MTR_7g067010 42.572 552 292 6 20 555 24 566 5.49e-158 464
MsG0880043634.01.T01 MTR_3g069440 43.141 554 288 6 20 556 33 576 1.68e-157 463
MsG0880043634.01.T01 MTR_3g462710 44.107 560 278 9 20 557 24 570 2.19e-154 454
MsG0880043634.01.T01 MTR_4g015080 41.410 553 291 6 20 552 34 573 6.35e-146 433
MsG0880043634.01.T01 MTR_3g072300 42.468 551 288 8 19 551 23 562 1.99e-144 430
MsG0880043634.01.T01 MTR_4g033325 45.957 470 228 5 84 550 5 451 2.61e-142 420
MsG0880043634.01.T01 MTR_7g098180 39.726 584 298 9 19 567 30 594 8.75e-142 423
MsG0880043634.01.T01 MTR_4g033325 47.285 442 207 5 112 550 7 425 1.14e-141 417
MsG0880043634.01.T01 MTR_7g098200 40.215 557 289 7 19 549 28 566 2.06e-141 422
MsG0880043634.01.T01 MTR_7g098200 40.506 553 283 7 19 549 28 556 4.31e-141 421
MsG0880043634.01.T01 MTR_7g065080 40.079 509 270 5 78 570 2 491 1.38e-140 417
MsG0880043634.01.T01 MTR_4g033385 48.037 433 202 6 121 550 40 452 9.71e-140 413
MsG0880043634.01.T01 MTR_7g098040 40.036 557 290 8 19 549 33 571 1.34e-139 418
MsG0880043634.01.T01 MTR_7g098230 38.743 573 313 7 2 550 6 564 4.61e-138 414
MsG0880043634.01.T01 MTR_1g075440 40.642 561 293 7 19 555 27 571 4.85e-137 411
MsG0880043634.01.T01 MTR_7g098160 39.024 574 303 8 19 566 32 584 5.48e-136 409
MsG0880043634.01.T01 MTR_7g098090 39.478 575 297 9 19 561 32 587 1.17e-134 405
MsG0880043634.01.T01 MTR_7g098220 39.483 580 307 8 19 572 29 590 2.86e-131 396
MsG0880043634.01.T01 MTR_3g112470 38.519 540 297 6 22 544 25 546 1.68e-129 391
MsG0880043634.01.T01 MTR_1g042310 38.172 558 311 6 19 555 25 569 2.11e-129 391
MsG0880043634.01.T01 MTR_3g112450 39.455 550 294 9 22 551 25 555 1.91e-128 388
MsG0880043634.01.T01 MTR_5g012270 38.163 566 315 7 19 562 28 580 2.13e-127 386
MsG0880043634.01.T01 MTR_7g098220 39.502 562 296 8 37 572 3 546 2.29e-127 385
MsG0880043634.01.T01 MTR_5g055000 36.602 571 326 7 20 566 18 576 6.71e-127 384
MsG0880043634.01.T01 MTR_3g462710 45.351 441 222 6 123 557 34 461 9.98e-127 380
MsG0880043634.01.T01 MTR_3g112460 37.778 540 301 6 22 544 25 546 1.39e-126 383
MsG0880043634.01.T01 MTR_1g041835 39.247 558 304 6 19 555 26 569 1.95e-125 380
MsG0880043634.01.T01 MTR_1g042310 38.262 541 300 6 37 556 6 533 2.25e-125 380
MsG0880043634.01.T01 MTR_1g041815 39.068 558 305 6 19 555 26 569 7.96e-124 377
MsG0880043634.01.T01 MTR_1g042310 38.104 538 299 6 40 556 2 526 8.07e-124 375
MsG0880043634.01.T01 MTR_1g041875 38.278 546 289 8 9 531 21 541 1.22e-123 376
MsG0880043634.01.T01 MTR_7g088825 36.833 562 326 7 20 560 22 575 5.98e-123 375
MsG0880043634.01.T01 MTR_7g088820 37.037 567 320 9 20 561 25 579 1.95e-122 374
MsG0880043634.01.T01 MTR_7g088790 36.192 583 339 8 1 561 13 584 1.17e-119 367
MsG0880043634.01.T01 MTR_4g101380 38.732 568 312 9 19 562 26 581 9.02e-119 364
MsG0880043634.01.T01 MTR_5g012290 36.861 567 325 8 16 562 25 578 2.01e-118 363
MsG0880043634.01.T01 MTR_7g010820 36.364 572 319 8 20 560 26 583 1.01e-116 358
MsG0880043634.01.T01 MTR_1g041885 38.058 515 278 7 40 533 2 496 3.14e-116 355
MsG0880043634.01.T01 MTR_6g008690 36.380 558 301 14 25 556 12 541 2.96e-115 353
MsG0880043634.01.T01 MTR_7g098200 40.783 434 234 5 121 549 37 452 8.17e-115 350
MsG0880043634.01.T01 MTR_4g098800 34.452 566 332 8 22 563 38 588 4.87e-112 347
MsG0880043634.01.T01 MTR_7g088820 36.553 528 298 9 59 561 2 517 1.34e-111 343
MsG0880043634.01.T01 MTR_4g098800 34.452 566 332 8 22 563 103 653 3.66e-111 346
MsG0880043634.01.T01 MTR_7g005930 33.865 564 335 9 20 563 35 580 3.13e-110 342
MsG0880043634.01.T01 MTR_7g006540 34.991 583 329 10 19 564 62 631 1.10e-109 342
MsG0880043634.01.T01 MTR_5g014150 33.216 566 344 9 20 561 44 599 2.69e-109 340
MsG0880043634.01.T01 MTR_1g116930 32.384 562 338 8 19 557 22 564 1.63e-107 335
MsG0880043634.01.T01 MTR_5g038060 35.385 585 341 9 1 557 10 585 5.79e-107 334
MsG0880043634.01.T01 MTR_4g107580 32.712 590 358 9 1 564 8 584 7.08e-105 328
MsG0880043634.01.T01 MTR_4g107530 32.699 578 343 8 23 564 36 603 9.26e-105 328
MsG0880043634.01.T01 MTR_7g098150 39.775 445 224 6 19 437 32 458 2.79e-103 320
MsG0880043634.01.T01 MTR_7g013270 34.403 561 328 9 20 558 90 632 3.82e-103 325
MsG0880043634.01.T01 MTR_7g064780 32.812 576 345 11 15 561 19 581 5.58e-102 320
MsG0880043634.01.T01 MTR_4g107670 34.276 566 324 12 15 550 24 571 1.63e-101 319
MsG0880043634.01.T01 MTR_7g088820 37.723 448 262 7 120 561 33 469 5.74e-101 314
MsG0880043634.01.T01 MTR_4g107510 32.432 555 341 8 23 551 39 585 8.89e-101 317
MsG0880043634.01.T01 MTR_8g087780 34.225 561 332 8 20 550 21 574 1.06e-100 317
MsG0880043634.01.T01 MTR_2g017750 32.118 576 349 9 20 560 34 602 9.92e-100 315
MsG0880043634.01.T01 MTR_3g100980 34.336 565 319 10 20 556 16 556 2.06e-99 313
MsG0880043634.01.T01 MTR_5g038190 33.452 562 326 8 20 550 24 568 8.56e-99 311
MsG0880043634.01.T01 MTR_4g123537 34.116 554 324 12 17 550 38 570 3.74e-97 308
MsG0880043634.01.T01 MTR_8g469470 32.343 572 345 9 9 551 24 582 9.52e-96 304
MsG0880043634.01.T01 MTR_8g469310 32.504 563 331 8 20 550 26 571 1.44e-95 303
MsG0880043634.01.T01 MTR_5g085850 34.331 568 315 10 19 559 29 565 2.19e-95 303
MsG0880043634.01.T01 MTR_5g038380 31.972 563 335 9 20 550 28 574 3.36e-95 302
MsG0880043634.01.T01 MTR_8g087810 33.688 564 332 10 20 550 21 575 4.74e-95 302
MsG0880043634.01.T01 MTR_2g005130 32.971 552 317 9 22 550 42 563 2.01e-94 301
MsG0880043634.01.T01 MTR_4g033310 46.708 319 148 6 233 550 190 487 2.31e-94 298
MsG0880043634.01.T01 MTR_4g033310 53.988 163 67 1 19 173 30 192 1.38e-45 168
MsG0880043634.01.T01 MTR_3g100980 33.162 582 331 11 20 556 16 584 6.25e-94 300
MsG0880043634.01.T01 MTR_4g114340 34.331 568 332 11 19 563 23 572 2.64e-93 297
MsG0880043634.01.T01 MTR_7g064800 30.399 602 376 9 2 572 5 594 2.92e-93 298
MsG0880043634.01.T01 MTR_8g103233 31.926 592 350 12 9 567 6 577 8.08e-93 296
MsG0880043634.01.T01 MTR_1g009200 32.099 567 341 9 20 560 27 575 1.51e-92 296
MsG0880043634.01.T01 MTR_8g469480 32.807 570 338 9 23 561 41 596 2.95e-92 295
MsG0880043634.01.T01 MTR_1g085090 29.281 584 371 10 1 565 1 561 6.30e-92 295
MsG0880043634.01.T01 MTR_7g111260 31.076 576 353 10 1 556 1 552 5.86e-90 289
MsG0880043634.01.T01 MTR_4g107610 33.333 549 321 11 17 537 28 559 2.02e-89 288
MsG0880043634.01.T01 MTR_2g101650 31.670 581 348 13 11 561 14 575 1.15e-87 283
MsG0880043634.01.T01 MTR_4g011280 30.796 565 343 10 6 541 18 563 3.36e-82 269
MsG0880043634.01.T01 MTR_2g101640 32.117 548 334 9 15 537 18 552 1.58e-81 268
MsG0880043634.01.T01 MTR_2g093640 31.065 573 343 12 3 552 6 549 2.34e-81 265
MsG0880043634.01.T01 MTR_2g101610 32.482 548 328 10 21 541 28 560 2.90e-80 265
MsG0880043634.01.T01 MTR_2g101590 32.731 553 322 12 20 541 26 559 4.64e-80 264
MsG0880043634.01.T01 MTR_1g057460 31.512 549 335 12 10 541 34 558 1.65e-78 258
MsG0880043634.01.T01 MTR_7g098210 32.282 539 239 13 40 550 2 442 4.29e-78 254
MsG0880043634.01.T01 MTR_1g057460 32.848 481 282 12 78 541 31 487 1.22e-75 249
MsG0880043634.01.T01 MTR_1g026770 29.422 571 360 13 18 563 13 565 2.44e-75 250
MsG0880043634.01.T01 MTR_1g026740 27.719 570 365 10 6 547 3 553 5.50e-75 249
MsG0880043634.01.T01 MTR_0236s0050 32.582 488 290 10 70 541 23 487 1.38e-74 246
MsG0880043634.01.T01 MTR_2g101560 30.517 580 342 10 21 561 28 585 1.40e-74 249
MsG0880043634.01.T01 MTR_2g093160 28.943 577 350 13 3 552 6 549 1.60e-70 236
MsG0880043634.01.T01 MTR_2g093180 29.319 573 354 10 3 552 6 550 3.66e-70 236
MsG0880043634.01.T01 MTR_1g026750 28.142 565 363 12 21 560 19 565 7.19e-70 235
MsG0880043634.01.T01 MTR_4g024930 27.273 572 319 13 20 548 36 553 5.11e-62 214
MsG0880043634.01.T01 MTR_7g052600 26.160 539 345 9 20 545 25 523 2.94e-57 201
MsG0880043634.01.T01 MTR_7g051830 27.223 551 324 14 20 545 25 523 2.15e-56 198
MsG0880043634.01.T01 MTR_7g051880 26.691 547 332 12 20 545 25 523 1.19e-55 196
MsG0880043634.01.T01 MTR_1g009170 28.222 450 236 10 128 568 9 380 8.14e-53 185
MsG0880043634.01.T01 MTR_3g065350 37.267 161 93 3 318 478 1 153 4.05e-27 107
MsG0880043634.01.T01 MTR_4g033390 47.312 93 46 2 467 556 31 123 1.99e-22 93.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043634.01.T01 AT3G54450 55.735 558 238 6 8 561 2 554 0.0 653
MsG0880043634.01.T01 AT1G72125 44.846 553 260 6 22 553 31 559 4.16e-162 474
MsG0880043634.01.T01 AT1G22540 45.389 553 258 8 19 553 29 555 2.65e-160 469
MsG0880043634.01.T01 AT3G53960 42.179 569 294 8 3 552 23 575 3.77e-159 468
MsG0880043634.01.T01 AT1G72120 44.765 554 261 9 19 553 28 555 9.94e-159 465
MsG0880043634.01.T01 AT2G37900 42.115 558 279 9 20 556 38 572 3.35e-156 459
MsG0880043634.01.T01 AT3G54140 42.315 553 292 6 20 554 24 567 2.00e-151 447
MsG0880043634.01.T01 AT3G54140 42.315 553 292 6 20 554 24 567 2.00e-151 447
MsG0880043634.01.T01 AT5G01180 41.727 556 290 8 20 554 25 567 1.26e-150 445
MsG0880043634.01.T01 AT5G01180 41.727 556 290 8 20 554 25 567 1.26e-150 445
MsG0880043634.01.T01 AT5G01180 41.727 556 290 8 20 554 25 567 1.26e-150 445
MsG0880043634.01.T01 AT1G22550 41.869 578 285 7 1 553 11 562 1.64e-150 444
MsG0880043634.01.T01 AT1G72140 42.576 559 257 8 19 551 33 553 2.37e-147 436
MsG0880043634.01.T01 AT1G72130 42.308 546 267 8 21 553 26 536 2.55e-144 428
MsG0880043634.01.T01 AT1G22570 41.003 578 291 6 1 553 11 563 4.15e-144 428
MsG0880043634.01.T01 AT2G02040 41.113 557 292 9 20 553 41 584 4.28e-141 421
MsG0880043634.01.T01 AT1G22570 41.575 546 269 6 33 553 6 526 1.49e-139 415
MsG0880043634.01.T01 AT2G37900 41.359 515 258 9 63 556 2 493 3.23e-139 413
MsG0880043634.01.T01 AT1G62200 39.677 557 295 8 17 551 49 586 6.34e-137 410
MsG0880043634.01.T01 AT2G40460 42.086 556 281 10 19 553 23 558 1.66e-135 407
MsG0880043634.01.T01 AT5G46050 40.262 534 278 5 21 530 28 544 3.57e-133 400
MsG0880043634.01.T01 AT5G46040 38.899 563 310 4 19 561 26 574 4.26e-133 400
MsG0880043634.01.T01 AT1G62200 38.382 581 298 9 17 551 49 615 1.67e-131 397
MsG0880043634.01.T01 AT1G62200 38.382 581 298 9 17 551 63 629 2.64e-131 397
MsG0880043634.01.T01 AT2G02020 38.069 549 275 7 22 552 44 545 2.11e-126 382
MsG0880043634.01.T01 AT1G68570 39.459 555 307 8 21 553 24 571 7.04e-125 380
MsG0880043634.01.T01 AT1G68570 39.668 542 298 7 34 553 7 541 2.63e-123 375
MsG0880043634.01.T01 AT5G14940 35.943 562 314 12 20 556 7 547 2.89e-116 356
MsG0880043634.01.T01 AT3G01350 36.092 568 319 10 21 559 8 560 1.10e-114 352
MsG0880043634.01.T01 AT1G32450 33.972 574 345 10 19 566 36 601 2.87e-112 348
MsG0880043634.01.T01 AT5G13400 35.106 564 331 8 19 556 63 617 3.37e-112 348
MsG0880043634.01.T01 AT1G72130 40.227 440 224 7 118 553 14 418 5.24e-112 340
MsG0880043634.01.T01 AT1G72130 40.227 440 224 7 118 553 14 418 5.24e-112 340
MsG0880043634.01.T01 AT1G69870 35.018 554 327 6 20 550 51 594 9.21e-110 342
MsG0880043634.01.T01 AT1G12110 36.462 554 322 8 19 551 26 570 2.82e-109 339
MsG0880043634.01.T01 AT5G46050 40.674 445 243 4 121 561 36 463 3.88e-108 332
MsG0880043634.01.T01 AT2G26690 35.677 569 321 11 19 562 23 571 3.27e-105 328
MsG0880043634.01.T01 AT1G59740 34.353 556 313 9 19 545 40 572 4.64e-103 323
MsG0880043634.01.T01 AT1G18880 33.568 569 339 6 23 563 22 579 7.82e-103 322
MsG0880043634.01.T01 AT4G21680 33.571 560 333 9 22 554 30 577 3.80e-102 321
MsG0880043634.01.T01 AT2G26690 35.495 555 313 11 33 562 4 538 3.21e-101 317
MsG0880043634.01.T01 AT5G19640 32.862 566 329 11 21 564 60 596 2.53e-100 317
MsG0880043634.01.T01 AT2G26690 35.596 545 306 11 43 562 2 526 1.11e-98 310
MsG0880043634.01.T01 AT1G69850 34.452 566 325 10 20 550 25 579 3.02e-98 310
MsG0880043634.01.T01 AT1G27040 35.572 551 317 9 20 549 27 560 4.05e-97 307
MsG0880043634.01.T01 AT1G27040 35.572 551 317 9 20 549 23 556 4.18e-97 307
MsG0880043634.01.T01 AT1G52190 32.465 576 338 10 1 541 1 560 1.76e-96 306
MsG0880043634.01.T01 AT1G33440 35.262 553 302 13 19 542 37 562 6.47e-96 305
MsG0880043634.01.T01 AT1G27040 35.502 538 309 9 33 549 8 528 4.18e-94 298
MsG0880043634.01.T01 AT3G16180 32.392 602 350 10 1 561 1 586 1.04e-93 299
MsG0880043634.01.T01 AT3G21670 35.116 561 305 13 19 550 28 558 1.52e-93 298
MsG0880043634.01.T01 AT5G62680 31.699 571 344 11 23 561 46 602 9.91e-89 286
MsG0880043634.01.T01 AT1G27080 31.524 571 341 10 20 563 14 561 1.05e-88 285
MsG0880043634.01.T01 AT5G62730 32.793 555 332 12 20 554 56 589 3.53e-87 281
MsG0880043634.01.T01 AT5G62730 32.844 545 333 12 26 554 3 530 2.49e-86 278
MsG0880043634.01.T01 AT5G28470 31.429 560 339 11 2 537 5 543 2.88e-86 278
MsG0880043634.01.T01 AT3G47960 29.643 560 359 7 23 556 64 614 1.65e-84 276
MsG0880043634.01.T01 AT5G28470 31.250 560 338 12 2 537 5 541 2.28e-83 271
MsG0880043634.01.T01 AT1G69860 30.245 572 356 8 7 556 5 555 4.83e-82 267
MsG0880043634.01.T01 AT1G27080 31.296 540 321 10 51 563 3 519 9.49e-82 266
MsG0880043634.01.T01 AT3G45660 31.065 573 329 14 17 559 18 554 1.76e-79 261
MsG0880043634.01.T01 AT3G45660 31.065 573 329 14 17 559 18 554 1.76e-79 261
MsG0880043634.01.T01 AT3G45660 31.065 573 329 14 17 559 39 575 3.11e-79 260
MsG0880043634.01.T01 AT3G45650 30.465 581 347 13 1 556 1 549 7.02e-79 259
MsG0880043634.01.T01 AT3G45720 29.913 575 330 12 19 561 18 551 1.42e-76 253
MsG0880043634.01.T01 AT3G45680 28.014 589 366 12 1 564 1 556 8.70e-76 251
MsG0880043634.01.T01 AT3G25260 30.074 542 314 10 20 545 21 513 4.81e-75 248
MsG0880043634.01.T01 AT3G45700 28.348 575 356 11 1 556 1 538 1.91e-73 244
MsG0880043634.01.T01 AT3G45650 29.160 607 347 14 1 556 1 575 2.70e-73 245
MsG0880043634.01.T01 AT3G45710 27.009 585 371 11 1 560 1 554 7.90e-73 243
MsG0880043634.01.T01 AT3G25280 28.571 539 332 9 20 545 21 519 1.30e-68 231
MsG0880043634.01.T01 AT3G45690 26.195 565 326 12 18 561 16 510 1.07e-61 212
MsG0880043634.01.T01 AT2G38100 28.625 531 326 15 48 561 2 496 3.33e-56 197
MsG0880043634.01.T01 AT2G38100 28.625 531 326 15 48 561 24 518 7.00e-56 197
MsG0880043634.01.T01 AT2G38100 28.625 531 326 15 48 561 18 512 8.53e-56 196
MsG0880043634.01.T01 AT2G02020 36.237 287 166 1 22 291 44 330 1.32e-51 185
MsG0880043634.01.T01 AT2G02020 39.726 219 127 4 335 552 310 524 4.46e-46 170
MsG0880043634.01.T01 AT5G11570 26.212 557 307 14 11 547 4 476 3.83e-45 166

Find 143 sgRNAs with CRISPR-Local

Find 407 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGTACTATGTTTGGATTT+TGG 0.145938 8:+28126952 None:intergenic
AATGAAAATCACGATATTTA+AGG 0.178934 8:+28119757 None:intergenic
CACACCTTGATGATTATTAT+TGG 0.205565 8:-28120107 MsG0880043634.01.T01:CDS
TGTGTTAAGTGCTGTTAATT+TGG 0.220123 8:-28120076 MsG0880043634.01.T01:CDS
AAAGGAGCACTACTAGAAAT+TGG 0.235775 8:+28126990 None:intergenic
CCATCACTCCACAACCAAAA+AGG 0.253088 8:-28126765 MsG0880043634.01.T01:CDS
CAATACTACCGATGTATATT+TGG 0.262174 8:-28120359 MsG0880043634.01.T01:CDS
GGCATTGGCACTCTTCCTAT+TGG 0.263753 8:-28121973 MsG0880043634.01.T01:CDS
AGGATGTTTGGGTCTTATAT+AGG 0.278963 8:+28126919 None:intergenic
TGCAACACGGTTATCCCATT+TGG 0.279245 8:+28120495 None:intergenic
GTCTTATATAGGGAAAATTA+TGG 0.289839 8:+28126930 None:intergenic
TGGAGCAAAGTATGATATTT+AGG 0.291619 8:+28121780 None:intergenic
GTTGGGTGGGGTGTGGGGTT+AGG 0.297522 8:-28122020 MsG0880043634.01.T01:CDS
ACTTGGGCCAGTCTTGTAAA+TGG 0.307105 8:+28121912 None:intergenic
GGACAATGTTGGGTGGGGTG+TGG 0.309070 8:-28122027 MsG0880043634.01.T01:CDS
GACAATGTTGGGTGGGGTGT+GGG 0.321840 8:-28122026 MsG0880043634.01.T01:CDS
TTCATAGCTGATTCATATCT+TGG 0.330954 8:-28126370 MsG0880043634.01.T01:CDS
GTGTTAAGTGCTGTTAATTT+GGG 0.332355 8:-28120075 MsG0880043634.01.T01:CDS
CTCTTAGCATCCTTCTCTTC+CGG 0.334697 8:+28123808 None:intergenic
ACGAAGACTCGGTCGTATAT+TGG 0.344839 8:+28120546 None:intergenic
AAGTTTGAACACAAGGCTTA+TGG 0.351768 8:+28123860 None:intergenic
ACACCTTGATGATTATTATT+GGG 0.352520 8:-28120106 MsG0880043634.01.T01:CDS
GATTAATGTGCCACCTTGTT+TGG 0.353072 8:+28120647 None:intergenic
GGATGTTTGGGTCTTATATA+GGG 0.358242 8:+28126920 None:intergenic
TGATGATTATTATTGGGTTA+TGG 0.358619 8:-28120100 MsG0880043634.01.T01:CDS
TAAGAACATGATTGTTACTT+TGG 0.360556 8:-28119810 MsG0880043634.01.T01:three_prime_UTR
GGTTGGGAGATAACATCAAT+AGG 0.363887 8:-28120131 MsG0880043634.01.T01:CDS
CCCACCTATATTGATTTGTA+TGG 0.364822 8:+28121760 None:intergenic
GCATTGGCACTCTTCCTATT+GGG 0.365353 8:-28121972 MsG0880043634.01.T01:CDS
GCCGGACGGACTGAGAAGTT+TGG 0.368505 8:-28120253 MsG0880043634.01.T01:CDS
AAGGAGCACTACTAGAAATT+GGG 0.368703 8:+28126991 None:intergenic
AATTATGGGAGTACTATGTT+TGG 0.371072 8:+28126945 None:intergenic
TTGGGCTATCTGCCATGATT+TGG 0.371956 8:+28126813 None:intergenic
ACAATGTTGGGTGGGGTGTG+GGG 0.374470 8:-28122025 MsG0880043634.01.T01:CDS
GCAACACGGTTATCCCATTT+GGG 0.378471 8:+28120496 None:intergenic
AGAAGTAACCAAGAGGGTTC+TGG 0.380275 8:-28119997 MsG0880043634.01.T01:CDS
TAGTTTACCTGAAGATATAC+TGG 0.387756 8:+28123724 None:intergenic
TGGTACTTGGGCATTGTGGC+TGG 0.394291 8:-28123769 MsG0880043634.01.T01:CDS
TATACTCACAATGGTTGTTT+CGG 0.398118 8:-28120445 MsG0880043634.01.T01:CDS
CATCTTTCTCCTCTTCACTA+TGG 0.400638 8:+28121826 None:intergenic
TTCCCTCCAGCATCACTTCA+AGG 0.400965 8:-28120600 MsG0880043634.01.T01:CDS
GTCTTCACTCATTTATCTTG+TGG 0.402311 8:-28126326 MsG0880043634.01.T01:intron
ATTAAACAAGTTAGCCATAC+AGG 0.402683 8:+28120708 None:intergenic
GGGTGTGGGGTTAGGAGTAT+TGG 0.406293 8:-28122012 MsG0880043634.01.T01:CDS
TACAGAAAGGAAAGCCCTAC+AGG 0.407761 8:-28121939 MsG0880043634.01.T01:CDS
CGGCTCTTGTAGAAACGAAA+AGG 0.407993 8:-28120425 MsG0880043634.01.T01:CDS
CCGGACGGACTGAGAAGTTT+GGG 0.413910 8:-28120252 MsG0880043634.01.T01:CDS
GGCTATCTGCCATGATTTGG+TGG 0.414389 8:+28126816 None:intergenic
AATTATAGTAGCATTATCTA+TGG 0.422696 8:+28119919 None:intergenic
AAATTCACCGGTCACCCAAA+TGG 0.425786 8:-28120510 MsG0880043634.01.T01:CDS
AATGAGTGAAGACAAGAGTA+TGG 0.428043 8:+28126336 None:intergenic
GAGATTTGCATACCAAGGTT+TGG 0.431626 8:-28126506 MsG0880043634.01.T01:CDS
TGGGGTGTGGGGATGAGAAA+AGG 0.434894 8:+28126972 None:intergenic
TATATAAGTATAGTAGGAGT+TGG 0.438611 8:-28120219 MsG0880043634.01.T01:CDS
TCTGATGCGTTTACTATCGT+TGG 0.439738 8:-28120303 MsG0880043634.01.T01:CDS
GCACTTTATGTGCTTTCCAT+TGG 0.444806 8:-28123892 MsG0880043634.01.T01:CDS
TCACTATTCCCTTTGCTTGG+TGG 0.448612 8:-28126394 MsG0880043634.01.T01:CDS
TTAATTTGGGTGTTTATATG+TGG 0.449648 8:-28120062 MsG0880043634.01.T01:CDS
AGGAGTGTTGGCATTGGCAT+TGG 0.457677 8:-28121988 MsG0880043634.01.T01:CDS
GGCTACAATAGATATCGTTC+TGG 0.462037 8:-28119976 MsG0880043634.01.T01:CDS
TCGTCACTATTCCCTTTGCT+TGG 0.467721 8:-28126397 MsG0880043634.01.T01:CDS
TGCTCCATACAAATCAATAT+AGG 0.469329 8:-28121764 MsG0880043634.01.T01:intron
GTTTATACCAGTATATCTTC+AGG 0.469782 8:-28123731 MsG0880043634.01.T01:intron
AATTCACCGGTCACCCAAAT+GGG 0.480800 8:-28120509 MsG0880043634.01.T01:CDS
TTGTCGCCGCAGCTCGCAAG+TGG 0.488259 8:-28121887 MsG0880043634.01.T01:CDS
GGTTATCCCATTTGGGTGAC+CGG 0.488655 8:+28120503 None:intergenic
TAGCAAGTGGCACGAAGACT+CGG 0.490850 8:+28120535 None:intergenic
GCGGCGTATATAAGTATAGT+AGG 0.493249 8:-28120225 MsG0880043634.01.T01:CDS
GGCTCTTGTAGAAACGAAAA+GGG 0.495860 8:-28120424 MsG0880043634.01.T01:CDS
GGTTGTGGAGTGATGGATGA+GGG 0.501318 8:+28126772 None:intergenic
TATTGTAGCCAGAACCCTCT+TGG 0.501499 8:+28119989 None:intergenic
ACGAGGCCTTGAAGTGATGC+TGG 0.507942 8:+28120594 None:intergenic
AGGAGTATTGGCAGGAGTGT+TGG 0.511573 8:-28122000 MsG0880043634.01.T01:CDS
TCTTATATAGGGAAAATTAT+GGG 0.512640 8:+28126931 None:intergenic
CGTGTCGTCGTCGAACTGAT+CGG 0.522709 8:+28123831 None:intergenic
CACGCGCCACTTGCGAGCTG+CGG 0.524318 8:+28121881 None:intergenic
CTTGTAAATGGACTCCCTGT+AGG 0.524715 8:+28121924 None:intergenic
CGTATATTGGAACAACGAAA+AGG 0.524827 8:+28120559 None:intergenic
CAAAACTCACCACCAAATCA+TGG 0.526335 8:-28126825 MsG0880043634.01.T01:exon
CATTATAATTGAAGTTGTTG+AGG 0.528014 8:-28120181 MsG0880043634.01.T01:CDS
TGGTTGTGGAGTGATGGATG+AGG 0.528098 8:+28126771 None:intergenic
TCTTCCTATTGGGAATCAAA+AGG 0.529313 8:-28121962 MsG0880043634.01.T01:CDS
GTGCAAAAGCTGGTGAGAAA+TGG 0.533099 8:-28120152 MsG0880043634.01.T01:CDS
TACTACCGATGTATATTTGG+TGG 0.535981 8:-28120356 MsG0880043634.01.T01:CDS
CCCAAACTTCTCAGTCCGTC+CGG 0.536644 8:+28120252 None:intergenic
CGACGACACGCCGGAAGAGA+AGG 0.536664 8:-28123818 MsG0880043634.01.T01:CDS
TTCTTCGTCTAATCCCTGTA+TGG 0.537187 8:-28120722 MsG0880043634.01.T01:CDS
TAACCCAATAATAATCATCA+AGG 0.540319 8:+28120103 None:intergenic
CTATGAAGCCACCAAGCAAA+GGG 0.542359 8:+28126386 None:intergenic
TTTCTTGACACTTTCAGTGT+CGG 0.543156 8:-28123944 MsG0880043634.01.T01:CDS
AGTAGCATTATCTATGGCAA+AGG 0.544789 8:+28119925 None:intergenic
ATAACCGTGTTGCAAAGAAT+CGG 0.549285 8:-28120486 MsG0880043634.01.T01:CDS
GTGCTTTCCATTGGTGAAGG+AGG 0.549336 8:-28123883 MsG0880043634.01.T01:CDS
TTGTAAATGGACTCCCTGTA+GGG 0.551151 8:+28121925 None:intergenic
AGGGAGTCCATTTACAAGAC+TGG 0.553305 8:-28121919 MsG0880043634.01.T01:CDS
AATTCAGGACAATGTTGGGT+GGG 0.554992 8:-28122033 MsG0880043634.01.T01:intron
TATGTGCTTTCCATTGGTGA+AGG 0.555245 8:-28123886 MsG0880043634.01.T01:CDS
GAACTTACATATGATGAAGA+TGG 0.559904 8:+28126727 None:intergenic
CAAACAAAACAAGAAATCCA+TGG 0.560424 8:-28120785 MsG0880043634.01.T01:CDS
ATTGGCAGGAGTGTTGGCAT+TGG 0.560470 8:-28121994 MsG0880043634.01.T01:CDS
CACACATATTTCACCAAACA+AGG 0.565863 8:-28120660 MsG0880043634.01.T01:CDS
GTTGGGAGATAACATCAATA+GGG 0.567469 8:-28120130 MsG0880043634.01.T01:CDS
TGAGATTTGATGCCAAACCT+TGG 0.567641 8:+28126494 None:intergenic
GTCACTGAACATAATCTCCA+TGG 0.569399 8:+28120768 None:intergenic
AGTAAACGCATCAGAGATGC+CGG 0.575326 8:+28120311 None:intergenic
AGGAGCACTACTAGAAATTG+GGG 0.577948 8:+28126992 None:intergenic
GCTATGAAGCCACCAAGCAA+AGG 0.578420 8:+28126385 None:intergenic
GGGAATCAAAAGGTACAGAA+AGG 0.580406 8:-28121952 MsG0880043634.01.T01:CDS
CTTCCTCAATATATGATCAC+CGG 0.580732 8:-28120330 MsG0880043634.01.T01:CDS
ATTCAGGACAATGTTGGGTG+GGG 0.582595 8:-28122032 MsG0880043634.01.T01:intron
GCTGAGAGATTTGCATACCA+AGG 0.590021 8:-28126511 MsG0880043634.01.T01:CDS
TTAAACAAGTTAGCCATACA+GGG 0.590363 8:+28120709 None:intergenic
AAAGCTGGTGAGAAATGGTT+GGG 0.591814 8:-28120147 MsG0880043634.01.T01:CDS
GGCCTTGAAGTGATGCTGGA+GGG 0.597498 8:+28120598 None:intergenic
GTGTTGCAAAGAATCGGAGT+TGG 0.599308 8:-28120480 MsG0880043634.01.T01:CDS
CTTATGGCCTCCTTCACCAA+TGG 0.600332 8:+28123876 None:intergenic
GTGGGGTTAGGAGTATTGGC+AGG 0.603352 8:-28122008 MsG0880043634.01.T01:CDS
ATGCCGGTGATCATATATTG+AGG 0.604323 8:+28120327 None:intergenic
GTTAATGTTGCTAAAAGTCA+CGG 0.605449 8:-28120402 MsG0880043634.01.T01:CDS
AAATTCAGGACAATGTTGGG+TGG 0.606854 8:-28122034 MsG0880043634.01.T01:intron
AACTCCGATTCTTTGCAACA+CGG 0.606929 8:+28120482 None:intergenic
GCGGCGAAAGTTTGAACACA+AGG 0.613912 8:+28123853 None:intergenic
AGGCCTTGAAGTGATGCTGG+AGG 0.615708 8:+28120597 None:intergenic
AAAAGCTGGTGAGAAATGGT+TGG 0.619989 8:-28120148 MsG0880043634.01.T01:CDS
ACTGAGAAGTTTGGGAGCCG+CGG 0.621017 8:-28120244 MsG0880043634.01.T01:CDS
TTCTGGAGTGTAGTAAAACA+AGG 0.625507 8:-28119959 MsG0880043634.01.T01:exon
TTTAGTGATGATAATGTTGG+GGG 0.628840 8:+28126879 None:intergenic
GGTCGAACATGAACATGATG+AGG 0.633947 8:+28121801 None:intergenic
ACAGAAAGGAAAGCCCTACA+GGG 0.634031 8:-28121938 MsG0880043634.01.T01:CDS
CCACTTGCTAGAAAATTCAC+CGG 0.636988 8:-28120522 MsG0880043634.01.T01:CDS
AACTAAGAGATAGAAAGAGA+AGG 0.637674 8:-28127028 None:intergenic
TTGGTGGTACTTGGGCATTG+TGG 0.645431 8:-28123773 MsG0880043634.01.T01:CDS
GTCGTCGTCGAACTGATCGG+CGG 0.646189 8:+28123834 None:intergenic
GAGGCAATTAGTGCAAAAGC+TGG 0.647395 8:-28120162 MsG0880043634.01.T01:CDS
GGCACATTAATCCATACCCT+AGG 0.652827 8:-28120636 MsG0880043634.01.T01:CDS
GATGAAAGAAGTAACCAAGA+GGG 0.661163 8:-28120003 MsG0880043634.01.T01:CDS
GCATCACTTCAAGGCCTCGT+CGG 0.670950 8:-28120591 MsG0880043634.01.T01:CDS
TCAGTTCGACGACGACACGC+CGG 0.683054 8:-28123827 MsG0880043634.01.T01:CDS
AGTAACCACCAAATATACAT+CGG 0.684698 8:+28120351 None:intergenic
AGATGAAAGAAGTAACCAAG+AGG 0.693348 8:-28120004 MsG0880043634.01.T01:CDS
ACATATTTCACCAAACAAGG+TGG 0.708994 8:-28120657 MsG0880043634.01.T01:CDS
TACTATACTTATATACGCCG+CGG 0.710647 8:+28120227 None:intergenic
AAAGGATCGTGACTCCGACG+AGG 0.738339 8:+28120577 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTATATGGTTTAATT+AGG + Chr8:28122475-28122494 None:intergenic 10.0%
!! AAAATTATATGGTTTAATTA+GGG + Chr8:28122474-28122493 None:intergenic 10.0%
!! ACTAATATATTAATTAAGTT+GGG + Chr8:28122499-28122518 None:intergenic 10.0%
!! ATAATCGAATTAAATATATA+TGG + Chr8:28125616-28125635 None:intergenic 10.0%
!! CTATATGATATAATATTAAA+AGG + Chr8:28120245-28120264 None:intergenic 10.0%
!! TACTAATATATTAATTAAGT+TGG + Chr8:28122500-28122519 None:intergenic 10.0%
!! TAGATAATTAAAGTTATTAA+CGG - Chr8:28121779-28121798 MsG0880043634.01.T01:CDS 10.0%
!! TATACATTAGTTAAAAAATA+TGG + Chr8:28121685-28121704 None:intergenic 10.0%
!!! ATAAATAAATAGTTTTGATT+GGG + Chr8:28125467-28125486 None:intergenic 10.0%
!!! TTATTTTATTAGTTGAAATT+TGG + Chr8:28124544-28124563 None:intergenic 10.0%
!! AAAAATATTCTTAATTGAAG+GGG + Chr8:28122385-28122404 None:intergenic 15.0%
!! AAAAATTATTCACATAAAGT+TGG + Chr8:28122589-28122608 None:intergenic 15.0%
!! AAAGTAATTAACAAAATGAT+TGG - Chr8:28124156-28124175 MsG0880043634.01.T01:intron 15.0%
!! AAATTAAAGATAGATATCAT+AGG + Chr8:28121897-28121916 None:intergenic 15.0%
!! AAATTGAAATTTAATATTGG+AGG + Chr8:28120816-28120835 None:intergenic 15.0%
!! AAGAAAATATGATATTATGA+TGG + Chr8:28122563-28122582 None:intergenic 15.0%
!! AATATTATATCATATAGTTG+TGG - Chr8:28120248-28120267 MsG0880043634.01.T01:CDS 15.0%
!! AATTGAAATTTAATATTGGA+GGG + Chr8:28120815-28120834 None:intergenic 15.0%
!! AGAAAATATGATATTATGAT+GGG + Chr8:28122562-28122581 None:intergenic 15.0%
!! AGGTTAAAAATTAAGTATAA+AGG + Chr8:28122322-28122341 None:intergenic 15.0%
!! ATGTATGATTCTAATTATAA+TGG - Chr8:28124689-28124708 MsG0880043634.01.T01:intron 15.0%
!! CAAAAATATTCTTAATTGAA+GGG + Chr8:28122386-28122405 None:intergenic 15.0%
!! CAAAGAATTTCTTTATATTA+AGG + Chr8:28123690-28123709 None:intergenic 15.0%
!! CAATTACATGATTAAAAAAT+GGG + Chr8:28120214-28120233 None:intergenic 15.0%
!! CATATAAAAATTTGATGAAT+TGG + Chr8:28125581-28125600 None:intergenic 15.0%
!! GATCAATTAAATAATGAAAA+GGG + Chr8:28120120-28120139 None:intergenic 15.0%
!! TCAAAAATATTCTTAATTGA+AGG + Chr8:28122387-28122406 None:intergenic 15.0%
!! TCAATTACATGATTAAAAAA+TGG + Chr8:28120215-28120234 None:intergenic 15.0%
!! TGAAATGAATATATTAACAA+AGG + Chr8:28125079-28125098 None:intergenic 15.0%
!! TGATCAATTAAATAATGAAA+AGG + Chr8:28120121-28120140 None:intergenic 15.0%
!! TTTCATTATTTAATTGATCA+TGG - Chr8:28120121-28120140 MsG0880043634.01.T01:CDS 15.0%
!!! CAATTCATCAAATTTTTATA+TGG - Chr8:28125579-28125598 MsG0880043634.01.T01:intron 15.0%
!!! CATAAATAAATAGTTTTGAT+TGG + Chr8:28125468-28125487 None:intergenic 15.0%
!!! CTAATATATTAATTAAGTTG+GGG + Chr8:28122498-28122517 None:intergenic 15.0%
!!! GATTTTATTTATAAAAAGAC+TGG - Chr8:28124212-28124231 MsG0880043634.01.T01:intron 15.0%
!!! TAATTTAAAGTTAGAAAGAA+TGG + Chr8:28125055-28125074 None:intergenic 15.0%
!!! TTAATAGGTTAATTTGTTAT+GGG - Chr8:28125767-28125786 MsG0880043634.01.T01:intron 15.0%
!!! TTTAATAGGTTAATTTGTTA+TGG - Chr8:28125766-28125785 MsG0880043634.01.T01:intron 15.0%
!!! TTTATTGATTGTAATTAATG+TGG + Chr8:28121406-28121425 None:intergenic 15.0%
!! AAAGAAAATTGAGGATTATT+AGG - Chr8:28125243-28125262 MsG0880043634.01.T01:intron 20.0%
!! AATCCTATACAACAATAATA+TGG - Chr8:28120980-28120999 MsG0880043634.01.T01:intron 20.0%
!! AATTATAGTAGCATTATCTA+TGG + Chr8:28126871-28126890 None:intergenic 20.0%
!! AGGAAAAAATAATAATTGAG+GGG + Chr8:28120177-28120196 None:intergenic 20.0%
!! ATATATGTGACAAAAAATTC+AGG - Chr8:28124739-28124758 MsG0880043634.01.T01:intron 20.0%
!! ATCAATATTTGATTCTACAT+TGG + Chr8:28124195-28124214 None:intergenic 20.0%
!! ATTGTAAAGTTAGAAAATCA+AGG - Chr8:28121579-28121598 MsG0880043634.01.T01:intron 20.0%
!! GAGGAAAAAATAATAATTGA+GGG + Chr8:28120178-28120197 None:intergenic 20.0%
!! TAATTGGAAAATTATGTGAA+TGG - Chr8:28124460-28124479 MsG0880043634.01.T01:intron 20.0%
!! TAGTGAAAAACACTAATAAA+TGG + Chr8:28121345-28121364 None:intergenic 20.0%
!! TAGTTGACCAAAATAAATAA+AGG + Chr8:28122248-28122267 None:intergenic 20.0%
!! TATTATTGTTGTATAGGATT+TGG + Chr8:28120980-28120999 None:intergenic 20.0%
!! TCTTATATAGGGAAAATTAT+GGG + Chr8:28119859-28119878 None:intergenic 20.0%
!! TTCCAAATAATTTCAAATCT+AGG - Chr8:28122282-28122301 MsG0880043634.01.T01:intron 20.0%
!! TTGTAAAGTTAGAAAATCAA+GGG - Chr8:28121580-28121599 MsG0880043634.01.T01:intron 20.0%
!! TTGTTTATTAAGGAGTTTAT+TGG + Chr8:28123714-28123733 None:intergenic 20.0%
!! TTTAATCATGTAATTGACTA+TGG - Chr8:28120218-28120237 MsG0880043634.01.T01:CDS 20.0%
!! TTTCTAAATCTTTATCTACA+AGG + Chr8:28123628-28123647 None:intergenic 20.0%
!!! AAAGTGTTTTGAGTATAAAA+AGG - Chr8:28126753-28126772 MsG0880043634.01.T01:CDS 20.0%
!!! AATAATTTGCAACAGATTTT+TGG - Chr8:28125946-28125965 MsG0880043634.01.T01:intron 20.0%
!!! AATTTTTTATGATCAAATGC+CGG - Chr8:28126516-28126535 MsG0880043634.01.T01:CDS 20.0%
!!! ATACTAAAAAGCATATTCTT+AGG - Chr8:28125904-28125923 MsG0880043634.01.T01:intron 20.0%
!!! ATCAGTCACTTTTTTTTTTT+TGG - Chr8:28124069-28124088 MsG0880043634.01.T01:intron 20.0%
!!! ATCCTAGATTTGAAATTATT+TGG + Chr8:28122287-28122306 None:intergenic 20.0%
!!! ATTTTTAGTGATGATAATGT+TGG + Chr8:28119914-28119933 None:intergenic 20.0%
!!! ATTTTTATCTATACTCACAA+TGG - Chr8:28126333-28126352 MsG0880043634.01.T01:CDS 20.0%
!!! GAATCAAATTTTCTTAATTG+TGG - Chr8:28123451-28123470 MsG0880043634.01.T01:intron 20.0%
!!! GAGTTTTATTATAATGAATG+GGG - Chr8:28120923-28120942 MsG0880043634.01.T01:intron 20.0%
!!! GCAAATTAAGTTGTTTATTA+AGG + Chr8:28123724-28123743 None:intergenic 20.0%
!!! GGAGTTTTATTATAATGAAT+GGG - Chr8:28120922-28120941 MsG0880043634.01.T01:intron 20.0%
!!! TAAAAAACTTAAAGCTTGTT+TGG + Chr8:28123973-28123992 None:intergenic 20.0%
!!! TAAGAATATGCTTTTTAGTA+TGG + Chr8:28125905-28125924 None:intergenic 20.0%
!!! TACTTTTGAAAAGAAAATTG+AGG - Chr8:28125234-28125253 MsG0880043634.01.T01:intron 20.0%
!!! TATTGACTTATATAATAGAG+AGG - Chr8:28123315-28123334 MsG0880043634.01.T01:intron 20.0%
!!! TCATCAAATTTTTATATGGT+AGG - Chr8:28125583-28125602 MsG0880043634.01.T01:intron 20.0%
!!! TTAAAGGGACAATTATTTTA+AGG + Chr8:28121310-28121329 None:intergenic 20.0%
!!! TTGATAATTTATACATAGAG+CGG - Chr8:28120598-28120617 MsG0880043634.01.T01:CDS 20.0%
!!! TTTGTATCGTTCAATTTTAT+AGG - Chr8:28120766-28120785 MsG0880043634.01.T01:CDS 20.0%
!!! TTTTTAGTGATGATAATGTT+GGG + Chr8:28119913-28119932 None:intergenic 20.0%
! AAAAAATTCAGGACAATGTT+GGG - Chr8:28124750-28124769 MsG0880043634.01.T01:intron 25.0%
! AAGAGAGAGAAAGAAAATAA+AGG + Chr8:28121036-28121055 None:intergenic 25.0%
! AATGAGGACAAATAATATAC+AGG + Chr8:28122705-28122724 None:intergenic 25.0%
! AGAGAGAGAAAGAAAATAAA+GGG + Chr8:28121035-28121054 None:intergenic 25.0%
! AGTGAAAGACAAGTTATATA+TGG - Chr8:28125321-28125340 MsG0880043634.01.T01:intron 25.0%
! ATACAAACAAGATTAGCATA+AGG + Chr8:28120753-28120772 None:intergenic 25.0%
! ATTGTAAAAGTCAGTGTATA+TGG + Chr8:28123354-28123373 None:intergenic 25.0%
! CAAATCTTGAAATGGAATAT+TGG + Chr8:28122669-28122688 None:intergenic 25.0%
! CAACCATATTATTGTTGTAT+AGG + Chr8:28120986-28121005 None:intergenic 25.0%
! CATTATAATTGAAGTTGTTG+AGG - Chr8:28126606-28126625 MsG0880043634.01.T01:intron 25.0%
! GAAGTAGTACTGTATTATTT+GGG - Chr8:28121533-28121552 MsG0880043634.01.T01:intron 25.0%
! GAATTAAATATATATGGCGT+AGG + Chr8:28125610-28125629 None:intergenic 25.0%
! GACAAATAATATACAGGAAT+AGG + Chr8:28122699-28122718 None:intergenic 25.0%
! GGAAAAAATAATAATTGAGG+GGG + Chr8:28120176-28120195 None:intergenic 25.0%
! GGAGGAAAAAATAATAATTG+AGG + Chr8:28120179-28120198 None:intergenic 25.0%
! GTCTTATATAGGGAAAATTA+TGG + Chr8:28119860-28119879 None:intergenic 25.0%
! GTGACAGTTATTAATAAAGT+TGG + Chr8:28122198-28122217 None:intergenic 25.0%
! TAAAGAATTTCTGATCAGTT+TGG + Chr8:28123651-28123670 None:intergenic 25.0%
! TAACCCAATAATAATCATCA+AGG + Chr8:28126687-28126706 None:intergenic 25.0%
! TACAGAAAAAAACAAGACAA+GGG - Chr8:28123237-28123256 MsG0880043634.01.T01:intron 25.0%
! TACCAAAATATCTTACGATA+TGG + Chr8:28123891-28123910 None:intergenic 25.0%
! TATATAAGTATAGTAGGAGT+TGG - Chr8:28126568-28126587 MsG0880043634.01.T01:intron 25.0%
! TCACATTATATAGACATTAG+CGG + Chr8:28120651-28120670 None:intergenic 25.0%
! TGAAGTAGTACTGTATTATT+TGG - Chr8:28121532-28121551 MsG0880043634.01.T01:intron 25.0%
! TGATGATTATTATTGGGTTA+TGG - Chr8:28126687-28126706 MsG0880043634.01.T01:intron 25.0%
! TTACAGAAAAAAACAAGACA+AGG - Chr8:28123236-28123255 MsG0880043634.01.T01:intron 25.0%
! TTGTATAGGATTTGGATTTA+CGG + Chr8:28120972-28120991 None:intergenic 25.0%
! TTTACCCATTGATAAAAAGT+CGG - Chr8:28125418-28125437 MsG0880043634.01.T01:intron 25.0%
! TTTGAGTATAAAAAGGTAGA+TGG - Chr8:28126760-28126779 MsG0880043634.01.T01:CDS 25.0%
!! ACACCTTGATGATTATTATT+GGG - Chr8:28126681-28126700 MsG0880043634.01.T01:intron 25.0%
!! ATTAAAGGCACATAATAGTT+CGG + Chr8:28122166-28122185 None:intergenic 25.0%
!! CAATAGAACTCAATTACTTT+TGG + Chr8:28124007-28124026 None:intergenic 25.0%
!! CACATAATTTTCCAATTAGA+TGG + Chr8:28124458-28124477 None:intergenic 25.0%
!! TAAGAACATGATTGTTACTT+TGG - Chr8:28126977-28126996 MsG0880043634.01.T01:five_prime_UTR 25.0%
!! TAAGTTGGGGAAAAATTATA+TGG + Chr8:28122485-28122504 None:intergenic 25.0%
!! TGTTTGATGATAAATGTTAG+AGG - Chr8:28125697-28125716 MsG0880043634.01.T01:intron 25.0%
!! TTAATTTGGGTGTTTATATG+TGG - Chr8:28126725-28126744 MsG0880043634.01.T01:intron 25.0%
!!! ATGCACTCCTTTATTTATTT+TGG - Chr8:28122238-28122257 MsG0880043634.01.T01:intron 25.0%
!!! ATGGTGTCTTGATATTTTAA+AGG + Chr8:28121326-28121345 None:intergenic 25.0%
!!! ATTGGACAAGTATTTTGAAA+CGG + Chr8:28121626-28121645 None:intergenic 25.0%
!!! CAAAATTTTGCTTTAGCTTA+TGG - Chr8:28122774-28122793 MsG0880043634.01.T01:intron 25.0%
!!! CAATTTATAGCTTTAGTTCA+TGG - Chr8:28120830-28120849 MsG0880043634.01.T01:intron 25.0%
!!! CGGAGTTTTATTATAATGAA+TGG - Chr8:28120921-28120940 MsG0880043634.01.T01:intron 25.0%
!!! CTAAGAGTTCATTTTTCAAT+TGG - Chr8:28122995-28123014 MsG0880043634.01.T01:intron 25.0%
!!! GAATTGAAATTTTGATCCTA+GGG + Chr8:28126170-28126189 None:intergenic 25.0%
!!! TCACTTTTTTTTTTTTGGAG+AGG - Chr8:28124074-28124093 MsG0880043634.01.T01:intron 25.0%
!!! TGGTGTCTTGATATTTTAAA+GGG + Chr8:28121325-28121344 None:intergenic 25.0%
!!! TTTTAGTGATGATAATGTTG+GGG + Chr8:28119912-28119931 None:intergenic 25.0%
AAAAGTCAGTGTATATGGTA+GGG + Chr8:28123349-28123368 None:intergenic 30.0%
AAGTTCCTTAAAGAATGATC+CGG - Chr8:28122048-28122067 MsG0880043634.01.T01:intron 30.0%
ACAAGATTAGCATAAGGTAA+AGG + Chr8:28120747-28120766 None:intergenic 30.0%
AGTAACCACCAAATATACAT+CGG + Chr8:28126439-28126458 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG + Chr8:28121644-28121663 None:intergenic 30.0%
ATATAGACATTAGCGGAAAA+CGG + Chr8:28120644-28120663 None:intergenic 30.0%
ATGGTTGAGCAAAATTTATG+TGG - Chr8:28125283-28125302 MsG0880043634.01.T01:intron 30.0%
ATTAAACAAGTTAGCCATAC+AGG + Chr8:28126082-28126101 None:intergenic 30.0%
CAAAAAATTCAGGACAATGT+TGG - Chr8:28124749-28124768 MsG0880043634.01.T01:intron 30.0%
CAAACAAAACAAGAAATCCA+TGG - Chr8:28126002-28126021 MsG0880043634.01.T01:intron 30.0%
CAATACTACCGATGTATATT+TGG - Chr8:28126428-28126447 MsG0880043634.01.T01:CDS 30.0%
CATAGTTATACAAGTTAACG+TGG + Chr8:28124118-28124137 None:intergenic 30.0%
CATGATTAAAAAATGGGTGT+TGG + Chr8:28120208-28120227 None:intergenic 30.0%
CCATACAAATCAATATAGGT+GGG - Chr8:28125027-28125046 MsG0880043634.01.T01:intron 30.0%
CTATCAAACAACAAACACAA+AGG + Chr8:28125859-28125878 None:intergenic 30.0%
CTTTGTTACCCATCAATAAA+AGG + Chr8:28125552-28125571 None:intergenic 30.0%
GAAATGTGCAAATCTTGAAA+TGG + Chr8:28122677-28122696 None:intergenic 30.0%
GAACTTACATATGATGAAGA+TGG + Chr8:28120063-28120082 None:intergenic 30.0%
GAATGGAATTAGTTCACTAA+AGG - Chr8:28124477-28124496 MsG0880043634.01.T01:intron 30.0%
GACAAGTGACAAACTTTAAT+AGG - Chr8:28125752-28125771 MsG0880043634.01.T01:intron 30.0%
GAGCTAAGTGATAAAAAAAG+AGG + Chr8:28122342-28122361 None:intergenic 30.0%
GTTAATGTTGCTAAAAGTCA+CGG - Chr8:28126385-28126404 MsG0880043634.01.T01:CDS 30.0%
GTTTATACCAGTATATCTTC+AGG - Chr8:28123056-28123075 MsG0880043634.01.T01:intron 30.0%
TAAAAGTCAGTGTATATGGT+AGG + Chr8:28123350-28123369 None:intergenic 30.0%
TAGTTTACCTGAAGATATAC+TGG + Chr8:28123066-28123085 None:intergenic 30.0%
TATACTCACAATGGTTGTTT+CGG - Chr8:28126342-28126361 MsG0880043634.01.T01:CDS 30.0%
TCCATACAAATCAATATAGG+TGG - Chr8:28125026-28125045 MsG0880043634.01.T01:intron 30.0%
TGCTCCATACAAATCAATAT+AGG - Chr8:28125023-28125042 MsG0880043634.01.T01:intron 30.0%
TGGAGCAAAGTATGATATTT+AGG + Chr8:28125010-28125029 None:intergenic 30.0%
TGGTTGAGCAAAATTTATGT+GGG - Chr8:28125284-28125303 MsG0880043634.01.T01:intron 30.0%
TTAAACAAGTTAGCCATACA+GGG + Chr8:28126081-28126100 None:intergenic 30.0%
TTATACATAGAGCGGAAAAA+CGG - Chr8:28120606-28120625 MsG0880043634.01.T01:CDS 30.0%
TTATGTGGTTGAGGATTATT+AGG - Chr8:28125298-28125317 MsG0880043634.01.T01:intron 30.0%
! AGTACTATGTTTGGATTTTG+GGG + Chr8:28119836-28119855 None:intergenic 30.0%
! CACACCTTGATGATTATTAT+TGG - Chr8:28126680-28126699 MsG0880043634.01.T01:intron 30.0%
! GACCATATCGTAAGATATTT+TGG - Chr8:28123886-28123905 MsG0880043634.01.T01:CDS 30.0%
! GAGTACTATGTTTGGATTTT+GGG + Chr8:28119837-28119856 None:intergenic 30.0%
! GTGACATATCTCAACTATTT+TGG - Chr8:28123524-28123543 MsG0880043634.01.T01:intron 30.0%
! GTGTTAAGTGCTGTTAATTT+GGG - Chr8:28126712-28126731 MsG0880043634.01.T01:intron 30.0%
! GTTCATTCAGAAATTTTGTG+AGG + Chr8:28120326-28120345 None:intergenic 30.0%
! TATTAATAAAGTTGGCTCCA+AGG + Chr8:28122190-28122209 None:intergenic 30.0%
! TCTCTTTTTACACTAGATGA+TGG - Chr8:28125155-28125174 MsG0880043634.01.T01:intron 30.0%
! TGAAGAATATGTTCCCATTT+TGG + Chr8:28124410-28124429 None:intergenic 30.0%
! TGTGTTAAGTGCTGTTAATT+TGG - Chr8:28126711-28126730 MsG0880043634.01.T01:intron 30.0%
! TTACAATTCACTCGTTTTAC+AGG + Chr8:28121566-28121585 None:intergenic 30.0%
! TTCATAGCTGATTCATATCT+TGG - Chr8:28120417-28120436 MsG0880043634.01.T01:CDS 30.0%
! TTGCTCACTTTAAAGAAACA+GGG - Chr8:28122139-28122158 MsG0880043634.01.T01:intron 30.0%
! TTTAGTGATGATAATGTTGG+GGG + Chr8:28119911-28119930 None:intergenic 30.0%
!! AATTATGGGAGTACTATGTT+TGG + Chr8:28119845-28119864 None:intergenic 30.0%
!! AGAGTTCATTTTTCAATTGG+TGG - Chr8:28122998-28123017 MsG0880043634.01.T01:intron 30.0%
!! ATTTTTCAATTGGTGGTACT+TGG - Chr8:28123005-28123024 MsG0880043634.01.T01:intron 30.0%
!! CTTGGACATGTATTTTGAAA+CGG - Chr8:28121837-28121856 MsG0880043634.01.T01:CDS 30.0%
!! GGAATTGAAATTTTGATCCT+AGG + Chr8:28126171-28126190 None:intergenic 30.0%
!! TTAATTTGTTATGGGCATGT+AGG - Chr8:28125775-28125794 MsG0880043634.01.T01:intron 30.0%
!! TTCTAAATTAAGAGTGCTTC+AGG + Chr8:28121952-28121971 None:intergenic 30.0%
!! TTTTGTTTAGGATGATGAGT+TGG + Chr8:28119947-28119966 None:intergenic 30.0%
!! TTTTTCAATTGGTGGTACTT+GGG - Chr8:28123006-28123025 MsG0880043634.01.T01:intron 30.0%
!!! GTTACCGACTTTTTATCAAT+GGG + Chr8:28125425-28125444 None:intergenic 30.0%
!!! TACTTTTTCATCTAGCATAG+AGG - Chr8:28123284-28123303 MsG0880043634.01.T01:intron 30.0%
!!! TAGAAATTGGGGTTTTGATT+TGG + Chr8:28119787-28119806 None:intergenic 30.0%
!!! TGTTACCGACTTTTTATCAA+TGG + Chr8:28125426-28125445 None:intergenic 30.0%
!!! TTTTACACTAGATGATGGAT+GGG - Chr8:28125160-28125179 MsG0880043634.01.T01:intron 30.0%
!!! TTTTTACACTAGATGATGGA+TGG - Chr8:28125159-28125178 MsG0880043634.01.T01:intron 30.0%
AAACACTTGTGAGATTGCTT+AGG + Chr8:28123920-28123939 None:intergenic 35.0%
AAGTTTGAACACAAGGCTTA+TGG + Chr8:28122930-28122949 None:intergenic 35.0%
AATGAGTGAAGACAAGAGTA+TGG + Chr8:28120454-28120473 None:intergenic 35.0%
ACATATTTCACCAAACAAGG+TGG - Chr8:28126130-28126149 MsG0880043634.01.T01:intron 35.0%
AGAAACCAGTTTCACCAAAA+TGG - Chr8:28124393-28124412 MsG0880043634.01.T01:intron 35.0%
AGATGAAAGAAGTAACCAAG+AGG - Chr8:28126783-28126802 MsG0880043634.01.T01:CDS 35.0%
AGTAGCATTATCTATGGCAA+AGG + Chr8:28126865-28126884 None:intergenic 35.0%
AGTGAAAAACGTGAACACAT+GGG - Chr8:28120359-28120378 MsG0880043634.01.T01:CDS 35.0%
ATAACCGTGTTGCAAAGAAT+CGG - Chr8:28126301-28126320 MsG0880043634.01.T01:intron 35.0%
ATTATGTGCCTTTAATGCCT+TGG - Chr8:28122170-28122189 MsG0880043634.01.T01:intron 35.0%
ATTGTGTACAACTTGACCAA+AGG + Chr8:28123563-28123582 None:intergenic 35.0%
CAATTTGCACACCATCTAAT+TGG - Chr8:28124444-28124463 MsG0880043634.01.T01:intron 35.0%
CACACATATTTCACCAAACA+AGG - Chr8:28126127-28126146 MsG0880043634.01.T01:intron 35.0%
CGTATATTGGAACAACGAAA+AGG + Chr8:28126231-28126250 None:intergenic 35.0%
CTAAACCCACAATAAGTTGT+TGG + Chr8:28125825-28125844 None:intergenic 35.0%
CTTCCTCAATATATGATCAC+CGG - Chr8:28126457-28126476 MsG0880043634.01.T01:CDS 35.0%
GAAACCAGTTTCACCAAAAT+GGG - Chr8:28124394-28124413 MsG0880043634.01.T01:intron 35.0%
GAGCAAAATTTATGTGGTTG+AGG - Chr8:28125289-28125308 MsG0880043634.01.T01:intron 35.0%
GATGAAAGAAGTAACCAAGA+GGG - Chr8:28126784-28126803 MsG0880043634.01.T01:CDS 35.0%
GGAGTGAAAGACAAGTTATA+TGG - Chr8:28125264-28125283 MsG0880043634.01.T01:intron 35.0%
GGATACCAACAACTTATTGT+GGG - Chr8:28125817-28125836 MsG0880043634.01.T01:intron 35.0%
GGCAAAAATTGTTGCTATGA+AGG + Chr8:28124943-28124962 None:intergenic 35.0%
GTCTTCACTCATTTATCTTG+TGG - Chr8:28120461-28120480 MsG0880043634.01.T01:CDS 35.0%
GTTACCCATCAATAAAAGGT+GGG + Chr8:28125548-28125567 None:intergenic 35.0%
GTTGGGAGATAACATCAATA+GGG - Chr8:28126657-28126676 MsG0880043634.01.T01:intron 35.0%
TAAATTGCAAGTGCATGCAT+GGG + Chr8:28122739-28122758 None:intergenic 35.0%
TAACACTACTCATGCTTAGT+TGG - Chr8:28125441-28125460 MsG0880043634.01.T01:intron 35.0%
TACTACCGATGTATATTTGG+TGG - Chr8:28126431-28126450 MsG0880043634.01.T01:CDS 35.0%
TACTATACTTATATACGCCG+CGG + Chr8:28126563-28126582 None:intergenic 35.0%
TAGTTCATGGTTCTTGATTC+TGG - Chr8:28120843-28120862 MsG0880043634.01.T01:intron 35.0%
TCTTCCTATTGGGAATCAAA+AGG - Chr8:28124825-28124844 MsG0880043634.01.T01:intron 35.0%
TGGATACCAACAACTTATTG+TGG - Chr8:28125816-28125835 MsG0880043634.01.T01:intron 35.0%
TGTGTGATATGTTAGTGATG+TGG + Chr8:28121065-28121084 None:intergenic 35.0%
TGTTACCCATCAATAAAAGG+TGG + Chr8:28125549-28125568 None:intergenic 35.0%
TTAAATTGCAAGTGCATGCA+TGG + Chr8:28122740-28122759 None:intergenic 35.0%
TTCACTAAAGGTAAGAGAAG+TGG - Chr8:28124489-28124508 MsG0880043634.01.T01:intron 35.0%
TTCGATTATTGAATGAGCGT+TGG - Chr8:28125627-28125646 MsG0880043634.01.T01:intron 35.0%
TTTCTTGACACTTTCAGTGT+CGG - Chr8:28122843-28122862 MsG0880043634.01.T01:intron 35.0%
! AGGATGTTTGGGTCTTATAT+AGG + Chr8:28119871-28119890 None:intergenic 35.0%
! ATGCAACACTTTGTCTTTTG+CGG - Chr8:28120901-28120920 MsG0880043634.01.T01:intron 35.0%
! CAATTTTTGCCATAGTGAAG+AGG - Chr8:28124952-28124971 MsG0880043634.01.T01:intron 35.0%
! GACTAGTTATAGTCTTGGTT+TGG + Chr8:28123606-28123625 None:intergenic 35.0%
! GGATGTTTGGGTCTTATATA+GGG + Chr8:28119870-28119889 None:intergenic 35.0%
! GTTACCCACCTTTTATTGAT+GGG - Chr8:28125541-28125560 MsG0880043634.01.T01:intron 35.0%
! GTTGCTCACTTTAAAGAAAC+AGG - Chr8:28122138-28122157 MsG0880043634.01.T01:intron 35.0%
! TGGCTTTTACTTTGTACCTT+TGG - Chr8:28123544-28123563 MsG0880043634.01.T01:intron 35.0%
! TGTTACCCACCTTTTATTGA+TGG - Chr8:28125540-28125559 MsG0880043634.01.T01:intron 35.0%
! TTGCTTTAGCTTATGGTTGA+TGG - Chr8:28122781-28122800 MsG0880043634.01.T01:intron 35.0%
! TTTTATGATCAAATGCCGGA+CGG - Chr8:28126520-28126539 MsG0880043634.01.T01:CDS 35.0%
!! AAAAATGGGTGTTGGAGATT+TGG + Chr8:28120200-28120219 None:intergenic 35.0%
!! AAAGGAGCACTACTAGAAAT+TGG + Chr8:28119800-28119819 None:intergenic 35.0%
!! AAGGAGCACTACTAGAAATT+GGG + Chr8:28119799-28119818 None:intergenic 35.0%
!! ACAAGGACTAGTTATAGTCT+TGG + Chr8:28123611-28123630 None:intergenic 35.0%
!! ATGATTTTGGAGAGGATGTT+TGG + Chr8:28119883-28119902 None:intergenic 35.0%
!! ATGGGCTTAGTTTGATAATG+AGG + Chr8:28122721-28122740 None:intergenic 35.0%
!! CCCACCTATATTGATTTGTA+TGG + Chr8:28125030-28125049 None:intergenic 35.0%
!! GAAATTTTGATCCTAGGGTA+TGG + Chr8:28126165-28126184 None:intergenic 35.0%
!! GGAGTACTATGTTTGGATTT+TGG + Chr8:28119838-28119857 None:intergenic 35.0%
!! TATAAAAAGACTGGTTTGCC+AGG - Chr8:28124221-28124240 MsG0880043634.01.T01:intron 35.0%
!! TGATTTTGGAGAGGATGTTT+GGG + Chr8:28119882-28119901 None:intergenic 35.0%
!! TGTACCTTTTGATTCCCAAT+AGG + Chr8:28124832-28124851 None:intergenic 35.0%
!! TTCTGGAGTGTAGTAAAACA+AGG - Chr8:28126828-28126847 MsG0880043634.01.T01:exon 35.0%
!!! AGTTACTTTTGCTCTTGCTT+GGG + Chr8:28119995-28120014 None:intergenic 35.0%
!!! ATGGGTGGGTTAATTTTGAT+AGG - Chr8:28125178-28125197 MsG0880043634.01.T01:intron 35.0%
!!! GACAAGTATTTTGAAACGGA+GGG + Chr8:28121622-28121641 None:intergenic 35.0%
!!! GACATGTATTTTGAAACGGA+GGG - Chr8:28121841-28121860 MsG0880043634.01.T01:CDS 35.0%
!!! TGGGTGGGTTAATTTTGATA+GGG - Chr8:28125179-28125198 MsG0880043634.01.T01:intron 35.0%
!!! TTTGGTGGTGAGTTTTGTTT+AGG + Chr8:28119959-28119978 None:intergenic 35.0%
AAAAACGTGAACACATGGGT+TGG - Chr8:28120363-28120382 MsG0880043634.01.T01:CDS 40.0%
AAAAGCTGGTGAGAAATGGT+TGG - Chr8:28126639-28126658 MsG0880043634.01.T01:intron 40.0%
AAAGCTGGTGAGAAATGGTT+GGG - Chr8:28126640-28126659 MsG0880043634.01.T01:intron 40.0%
AAAGGGACAAGAGTGACTAA+TGG + Chr8:28120103-28120122 None:intergenic 40.0%
AAATTCAGGACAATGTTGGG+TGG - Chr8:28124753-28124772 MsG0880043634.01.T01:intron 40.0%
AACGTTTCTCACGTCACATA+GGG - Chr8:28122814-28122833 MsG0880043634.01.T01:intron 40.0%
AACTCCGATTCTTTGCAACA+CGG + Chr8:28126308-28126327 None:intergenic 40.0%
AATGCTAACGAATGTACCTC+CGG + Chr8:28122070-28122089 None:intergenic 40.0%
AATTCAGGACAATGTTGGGT+GGG - Chr8:28124754-28124773 MsG0880043634.01.T01:intron 40.0%
ACTAAAGGTAAGAGAAGTGG+TGG - Chr8:28124492-28124511 MsG0880043634.01.T01:intron 40.0%
ATGCCGGTGATCATATATTG+AGG + Chr8:28126463-28126482 None:intergenic 40.0%
CAAAACTCACCACCAAATCA+TGG - Chr8:28119962-28119981 MsG0880043634.01.T01:exon 40.0%
CAGTGAAAAACGTGAACACA+TGG - Chr8:28120358-28120377 MsG0880043634.01.T01:CDS 40.0%
CATATGTGAAGTGGTTGACT+TGG - Chr8:28121819-28121838 MsG0880043634.01.T01:CDS 40.0%
CATCACTCCACAACCAAAAA+GGG - Chr8:28120023-28120042 MsG0880043634.01.T01:CDS 40.0%
CATCTTTCTCCTCTTCACTA+TGG + Chr8:28124964-28124983 None:intergenic 40.0%
GAGATTTGCATACCAAGGTT+TGG - Chr8:28120281-28120300 MsG0880043634.01.T01:CDS 40.0%
GATTAATGTGCCACCTTGTT+TGG + Chr8:28126143-28126162 None:intergenic 40.0%
GCACTTTATGTGCTTTCCAT+TGG - Chr8:28122895-28122914 MsG0880043634.01.T01:intron 40.0%
GCGGCGTATATAAGTATAGT+AGG - Chr8:28126562-28126581 MsG0880043634.01.T01:intron 40.0%
GGCTACAATAGATATCGTTC+TGG - Chr8:28126811-28126830 MsG0880043634.01.T01:exon 40.0%
GGCTCTTGTAGAAACGAAAA+GGG - Chr8:28126363-28126382 MsG0880043634.01.T01:CDS 40.0%
GGTTGGGAGATAACATCAAT+AGG - Chr8:28126656-28126675 MsG0880043634.01.T01:intron 40.0%
GTCACTGAACATAATCTCCA+TGG + Chr8:28126022-28126041 None:intergenic 40.0%
TAACGTTTCTCACGTCACAT+AGG - Chr8:28122813-28122832 MsG0880043634.01.T01:intron 40.0%
TACCTCCGGATCATTCTTTA+AGG + Chr8:28122056-28122075 None:intergenic 40.0%
TATGTGCTTTCCATTGGTGA+AGG - Chr8:28122901-28122920 MsG0880043634.01.T01:intron 40.0%
TCAGTGTATATGGTAGGGTT+TGG + Chr8:28123344-28123363 None:intergenic 40.0%
TCTGATGCGTTTACTATCGT+TGG - Chr8:28126484-28126503 MsG0880043634.01.T01:CDS 40.0%
TGAGATTTGATGCCAAACCT+TGG + Chr8:28120296-28120315 None:intergenic 40.0%
TTCCTTAAAGAATGATCCGG+AGG - Chr8:28122051-28122070 MsG0880043634.01.T01:intron 40.0%
TTCTTCGTCTAATCCCTGTA+TGG - Chr8:28126065-28126084 MsG0880043634.01.T01:intron 40.0%
TTGTCACTCATCCAACAACA+TGG + Chr8:28125737-28125756 None:intergenic 40.0%
TTGTTATGGGCATGTAGGTT+GGG - Chr8:28125780-28125799 MsG0880043634.01.T01:intron 40.0%
! CCACTTGCTAGAAAATTCAC+CGG - Chr8:28126265-28126284 MsG0880043634.01.T01:intron 40.0%
! GGGAATCAAAAGGTACAGAA+AGG - Chr8:28124835-28124854 MsG0880043634.01.T01:intron 40.0%
! GTGCATTGACATATGTGAAG+TGG - Chr8:28121810-28121829 MsG0880043634.01.T01:CDS 40.0%
! GTTGGGGGAAATCATGATTT+TGG + Chr8:28119896-28119915 None:intergenic 40.0%
! TTGTAAATGGACTCCCTGTA+GGG + Chr8:28124865-28124884 None:intergenic 40.0%
! TTTGTTATGGGCATGTAGGT+TGG - Chr8:28125779-28125798 MsG0880043634.01.T01:intron 40.0%
! TTTTTCACTGCTGTGGTTGT+TGG + Chr8:28120348-28120367 None:intergenic 40.0%
!! AGGAGCACTACTAGAAATTG+GGG + Chr8:28119798-28119817 None:intergenic 40.0%
!! CAAAGTGTTGCATCACAAAG+AGG + Chr8:28120894-28120913 None:intergenic 40.0%
!! GGGAAATCATGATTTTGGAG+AGG + Chr8:28119891-28119910 None:intergenic 40.0%
!! TGTTCCCATTTTGGTGAAAC+TGG + Chr8:28124401-28124420 None:intergenic 40.0%
!!! ATGTTTGGATTTTGGGGTGT+GGG + Chr8:28119830-28119849 None:intergenic 40.0%
!!! GAGTTACTTTTGCTCTTGCT+TGG + Chr8:28119996-28120015 None:intergenic 40.0%
!!! GGACAAGTATTTTGAAACGG+AGG + Chr8:28121623-28121642 None:intergenic 40.0%
!!! GGACATGTATTTTGAAACGG+AGG - Chr8:28121840-28121859 MsG0880043634.01.T01:CDS 40.0%
!!! TATGTTTGGATTTTGGGGTG+TGG + Chr8:28119831-28119850 None:intergenic 40.0%
AAATTCACCGGTCACCCAAA+TGG - Chr8:28126277-28126296 MsG0880043634.01.T01:intron 45.0%
AATTCACCGGTCACCCAAAT+GGG - Chr8:28126278-28126297 MsG0880043634.01.T01:intron 45.0%
ACAGAAAGGAAAGCCCTACA+GGG - Chr8:28124849-28124868 MsG0880043634.01.T01:intron 45.0%
ACTCATCCAACAACATGGCT+TGG + Chr8:28125732-28125751 None:intergenic 45.0%
AGAAGTAACCAAGAGGGTTC+TGG - Chr8:28126790-28126809 MsG0880043634.01.T01:CDS 45.0%
AGGGAGTCCATTTACAAGAC+TGG - Chr8:28124868-28124887 MsG0880043634.01.T01:intron 45.0%
AGTAAACGCATCAGAGATGC+CGG + Chr8:28126479-28126498 None:intergenic 45.0%
ATTCAGGACAATGTTGGGTG+GGG - Chr8:28124755-28124774 MsG0880043634.01.T01:intron 45.0%
CAACATCCAAGCCATGTTGT+TGG - Chr8:28125723-28125742 MsG0880043634.01.T01:intron 45.0%
CACTTGTGAGATTGCTTAGG+AGG + Chr8:28123917-28123936 None:intergenic 45.0%
CCATCACTCCACAACCAAAA+AGG - Chr8:28120022-28120041 MsG0880043634.01.T01:CDS 45.0%
CGGCTCTTGTAGAAACGAAA+AGG - Chr8:28126362-28126381 MsG0880043634.01.T01:CDS 45.0%
CTATGAAGCCACCAAGCAAA+GGG + Chr8:28120404-28120423 None:intergenic 45.0%
CTCTTAGCATCCTTCTCTTC+CGG + Chr8:28122982-28123001 None:intergenic 45.0%
GAGGCAATTAGTGCAAAAGC+TGG - Chr8:28126625-28126644 MsG0880043634.01.T01:intron 45.0%
GCAACACGGTTATCCCATTT+GGG + Chr8:28126294-28126313 None:intergenic 45.0%
GCTGAGAGATTTGCATACCA+AGG - Chr8:28120276-28120295 MsG0880043634.01.T01:CDS 45.0%
GGACAAGAGTGACTAATGGA+GGG + Chr8:28120099-28120118 None:intergenic 45.0%
GGCACATTAATCCATACCCT+AGG - Chr8:28126151-28126170 MsG0880043634.01.T01:intron 45.0%
GGTCGAACATGAACATGATG+AGG + Chr8:28124989-28125008 None:intergenic 45.0%
GTGCAAAAGCTGGTGAGAAA+TGG - Chr8:28126635-28126654 MsG0880043634.01.T01:intron 45.0%
GTGTTGCAAAGAATCGGAGT+TGG - Chr8:28126307-28126326 MsG0880043634.01.T01:intron 45.0%
GTTTCTACTTCCCACACGTA+GGG + Chr8:28120950-28120969 None:intergenic 45.0%
TACAGAAAGGAAAGCCCTAC+AGG - Chr8:28124848-28124867 MsG0880043634.01.T01:intron 45.0%
TATTGTAGCCAGAACCCTCT+TGG + Chr8:28126801-28126820 None:intergenic 45.0%
TCACTATTCCCTTTGCTTGG+TGG - Chr8:28120393-28120412 MsG0880043634.01.T01:CDS 45.0%
TCGTCACTATTCCCTTTGCT+TGG - Chr8:28120390-28120409 MsG0880043634.01.T01:CDS 45.0%
TCTTAGATGTCCTACCAACC+TGG + Chr8:28124242-28124261 None:intergenic 45.0%
TGCAACACGGTTATCCCATT+TGG + Chr8:28126295-28126314 None:intergenic 45.0%
TTGGGCTATCTGCCATGATT+TGG + Chr8:28119977-28119996 None:intergenic 45.0%
TTTCTACTTCCCACACGTAG+GGG + Chr8:28120949-28120968 None:intergenic 45.0%
! ACGAAGACTCGGTCGTATAT+TGG + Chr8:28126244-28126263 None:intergenic 45.0%
! ACTTGGGCCAGTCTTGTAAA+TGG + Chr8:28124878-28124897 None:intergenic 45.0%
! AGCATTCCAACCACCCTTTT+TGG + Chr8:28120039-28120058 None:intergenic 45.0%
! AGTTGGCTCCAAGGCATTAA+AGG + Chr8:28122181-28122200 None:intergenic 45.0%
! CAACAACATGGCTTGGATGT+TGG + Chr8:28125725-28125744 None:intergenic 45.0%
! CTTGTAAATGGACTCCCTGT+AGG + Chr8:28124866-28124885 None:intergenic 45.0%
! GCATTGGCACTCTTCCTATT+GGG - Chr8:28124815-28124834 MsG0880043634.01.T01:intron 45.0%
! GTTCACGTTTTTCACTGCTG+TGG + Chr8:28120355-28120374 None:intergenic 45.0%
!! AAAAGACTGGTTTGCCAGGT+TGG - Chr8:28124225-28124244 MsG0880043634.01.T01:intron 45.0%
!! AATGGGTGTTGGAGATTTGG+AGG + Chr8:28120197-28120216 None:intergenic 45.0%
!! ACACTAGATGATGGATGGGT+GGG - Chr8:28125164-28125183 MsG0880043634.01.T01:intron 45.0%
!! CCGGTGAATTTTCTAGCAAG+TGG + Chr8:28126268-28126287 None:intergenic 45.0%
!! TACACTAGATGATGGATGGG+TGG - Chr8:28125163-28125182 MsG0880043634.01.T01:intron 45.0%
!!! CCTTTTTGGTTGTGGAGTGA+TGG + Chr8:28120025-28120044 None:intergenic 45.0%
!!! TGTTTGGATTTTGGGGTGTG+GGG + Chr8:28119829-28119848 None:intergenic 45.0%
!! TATAAATTGAAATTTAATAT+TGG + Chr8:28120819-28120838 None:intergenic 5.0%
!!! ATTTAAAATAAAATAAAATG+AGG + Chr8:28124033-28124052 None:intergenic 5.0%
AGCTGCGGCGACAAAAACTT+GGG + Chr8:28124894-28124913 None:intergenic 50.0%
CACTCCACAACCAAAAAGGG+TGG - Chr8:28120026-28120045 MsG0880043634.01.T01:CDS 50.0%
CCACAACCAAAAAGGGTGGT+TGG - Chr8:28120030-28120049 MsG0880043634.01.T01:CDS 50.0%
CTTATGGCCTCCTTCACCAA+TGG + Chr8:28122914-28122933 None:intergenic 50.0%
GCGGCGAAAGTTTGAACACA+AGG + Chr8:28122937-28122956 None:intergenic 50.0%
GCTATGAAGCCACCAAGCAA+AGG + Chr8:28120405-28120424 None:intergenic 50.0%
GGGACAAGAGTGACTAATGG+AGG + Chr8:28120100-28120119 None:intergenic 50.0%
GGTTATCCCATTTGGGTGAC+CGG + Chr8:28126287-28126306 None:intergenic 50.0%
GGTTTCTACTTCCCACACGT+AGG + Chr8:28120951-28120970 None:intergenic 50.0%
GTGCTTTCCATTGGTGAAGG+AGG - Chr8:28122904-28122923 MsG0880043634.01.T01:intron 50.0%
TAGCAAGTGGCACGAAGACT+CGG + Chr8:28126255-28126274 None:intergenic 50.0%
TGGTTCTTGATTCTGGCAGC+TGG - Chr8:28120850-28120869 MsG0880043634.01.T01:intron 50.0%
TTCCCTCCAGCATCACTTCA+AGG - Chr8:28126187-28126206 MsG0880043634.01.T01:intron 50.0%
! CATGTAGGTTGGGTTTCGGT+TGG - Chr8:28125790-28125809 MsG0880043634.01.T01:intron 50.0%
! GGCTATCTGCCATGATTTGG+TGG + Chr8:28119974-28119993 None:intergenic 50.0%
! TGGGCATGTAGGTTGGGTTT+CGG - Chr8:28125786-28125805 MsG0880043634.01.T01:intron 50.0%
! TTGGTGGTACTTGGGCATTG+TGG - Chr8:28123014-28123033 MsG0880043634.01.T01:intron 50.0%
!! AGGAGTATTGGCAGGAGTGT+TGG - Chr8:28124787-28124806 MsG0880043634.01.T01:intron 50.0%
!! AGGAGTGTTGGCATTGGCAT+TGG - Chr8:28124799-28124818 MsG0880043634.01.T01:intron 50.0%
!! ATTGGCAGGAGTGTTGGCAT+TGG - Chr8:28124793-28124812 MsG0880043634.01.T01:intron 50.0%
!! GGCATTGGCACTCTTCCTAT+TGG - Chr8:28124814-28124833 MsG0880043634.01.T01:intron 50.0%
!! GGTTGTGGAGTGATGGATGA+GGG + Chr8:28120018-28120037 None:intergenic 50.0%
!! TGGTTGTGGAGTGATGGATG+AGG + Chr8:28120019-28120038 None:intergenic 50.0%
!!! CCAACCACCCTTTTTGGTTG+TGG + Chr8:28120033-28120052 None:intergenic 50.0%
AAAGGATCGTGACTCCGACG+AGG + Chr8:28126213-28126232 None:intergenic 55.0%
ACAATGTTGGGTGGGGTGTG+GGG - Chr8:28124762-28124781 MsG0880043634.01.T01:intron 55.0%
ACGAGGCCTTGAAGTGATGC+TGG + Chr8:28126196-28126215 None:intergenic 55.0%
ACTGAGAAGTTTGGGAGCCG+CGG - Chr8:28126543-28126562 MsG0880043634.01.T01:intron 55.0%
AGGCCTTGAAGTGATGCTGG+AGG + Chr8:28126193-28126212 None:intergenic 55.0%
CCCAAACTTCTCAGTCCGTC+CGG + Chr8:28126538-28126557 None:intergenic 55.0%
CGTGTCGTCGTCGAACTGAT+CGG + Chr8:28122959-28122978 None:intergenic 55.0%
GACAATGTTGGGTGGGGTGT+GGG - Chr8:28124761-28124780 MsG0880043634.01.T01:intron 55.0%
GAGCTGCGGCGACAAAAACT+TGG + Chr8:28124895-28124914 None:intergenic 55.0%
GCATCACTTCAAGGCCTCGT+CGG - Chr8:28126196-28126215 MsG0880043634.01.T01:intron 55.0%
GGCCTTGAAGTGATGCTGGA+GGG + Chr8:28126192-28126211 None:intergenic 55.0%
GGTTGGGTTTCGGTTGGAGT+TGG - Chr8:28125796-28125815 MsG0880043634.01.T01:intron 55.0%
TGGGGTGTGGGGATGAGAAA+AGG + Chr8:28119818-28119837 None:intergenic 55.0%
! GGGTGTGGGGTTAGGAGTAT+TGG - Chr8:28124775-28124794 MsG0880043634.01.T01:intron 55.0%
! TGGTACTTGGGCATTGTGGC+TGG - Chr8:28123018-28123037 MsG0880043634.01.T01:intron 55.0%
!! CCGGACGGACTGAGAAGTTT+GGG - Chr8:28126535-28126554 MsG0880043634.01.T01:intron 55.0%
!! GACTGGTTTGCCAGGTTGGT+AGG - Chr8:28124229-28124248 MsG0880043634.01.T01:intron 55.0%
!! GTGGGGTTAGGAGTATTGGC+AGG - Chr8:28124779-28124798 MsG0880043634.01.T01:intron 55.0%
ATGAATGGGGCCCCTACGTG+TGG - Chr8:28120936-28120955 MsG0880043634.01.T01:intron 60.0%
GGACAATGTTGGGTGGGGTG+TGG - Chr8:28124760-28124779 MsG0880043634.01.T01:intron 60.0%
GTCGTCGTCGAACTGATCGG+CGG + Chr8:28122956-28122975 None:intergenic 60.0%
TCAGTTCGACGACGACACGC+CGG - Chr8:28122960-28122979 MsG0880043634.01.T01:intron 60.0%
TGAATGGGGCCCCTACGTGT+GGG - Chr8:28120937-28120956 MsG0880043634.01.T01:intron 60.0%
!! GCCGGACGGACTGAGAAGTT+TGG - Chr8:28126534-28126553 MsG0880043634.01.T01:intron 60.0%
CGACGACACGCCGGAAGAGA+AGG - Chr8:28122969-28122988 MsG0880043634.01.T01:intron 65.0%
GTTGGGTGGGGTGTGGGGTT+AGG - Chr8:28124767-28124786 MsG0880043634.01.T01:intron 65.0%
TTGTCGCCGCAGCTCGCAAG+TGG - Chr8:28124900-28124919 MsG0880043634.01.T01:intron 65.0%
CACGCGCCACTTGCGAGCTG+CGG + Chr8:28124909-28124928 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 28119770 28127039 28119770 ID=MsG0880043634.01;Name=MsG0880043634.01
Chr8 mRNA 28119770 28127039 28119770 ID=MsG0880043634.01.T01;Parent=MsG0880043634.01;Name=MsG0880043634.01.T01;_AED=0.36;_eAED=0.36;_QI=211|1|1|1|0.5|0.4|5|199|572
Chr8 exon 28119770 28120848 28119770 ID=MsG0880043634.01.T01:exon:5586;Parent=MsG0880043634.01.T01
Chr8 exon 28121765 28122048 28121765 ID=MsG0880043634.01.T01:exon:5585;Parent=MsG0880043634.01.T01
Chr8 exon 28123732 28123974 28123732 ID=MsG0880043634.01.T01:exon:5584;Parent=MsG0880043634.01.T01
Chr8 exon 28126327 28126544 28126327 ID=MsG0880043634.01.T01:exon:5583;Parent=MsG0880043634.01.T01
Chr8 exon 28126735 28127039 28126735 ID=MsG0880043634.01.T01:exon:5582;Parent=MsG0880043634.01.T01
Chr8 five_prime_UTR 28126829 28127039 28126829 ID=MsG0880043634.01.T01:five_prime_utr;Parent=MsG0880043634.01.T01
Chr8 CDS 28126735 28126828 28126735 ID=MsG0880043634.01.T01:cds;Parent=MsG0880043634.01.T01
Chr8 CDS 28126327 28126544 28126327 ID=MsG0880043634.01.T01:cds;Parent=MsG0880043634.01.T01
Chr8 CDS 28123732 28123974 28123732 ID=MsG0880043634.01.T01:cds;Parent=MsG0880043634.01.T01
Chr8 CDS 28121765 28122048 28121765 ID=MsG0880043634.01.T01:cds;Parent=MsG0880043634.01.T01
Chr8 CDS 28119969 28120848 28119969 ID=MsG0880043634.01.T01:cds;Parent=MsG0880043634.01.T01
Chr8 three_prime_UTR 28119770 28119968 28119770 ID=MsG0880043634.01.T01:three_prime_utr;Parent=MsG0880043634.01.T01
Gene Sequence

>MsG0880043634.01.T01

ATGGCAGATAGCCCAAGCAAGAGCAAAAGTAACTCCCTCATCCATCACTCCACAACCAAAAAGGGTGGTTGGAATGCTGCCATCTTCATCATATTTGTGGAATTTGCTGAGAGATTTGCATACCAAGGTTTGGCATCAAATCTCATAAACTACCTCACAAAATTTCTGAATGAACCAACAACCACAGCAGTGAAAAACGTGAACACATGGGTTGGTGTCTCGTCACTATTCCCTTTGCTTGGTGGCTTCATAGCTGATTCATATCTTGGTCGATTCAACACCATACTCTTGTCTTCACTCATTTATCTTGTGGGCATGATTTTCTTGACACTTTCAGTGTCGGCACTTAGACACAAGACACTTTTCTTCTTTGCACTTTATGTGCTTTCCATTGGTGAAGGAGGCCATAAGCCTTGTGTTCAAACTTTCGCCGCCGATCAGTTCGACGACGACACGCCGGAAGAGAAGGATGCTAAGAGTTCATTTTTCAATTGGTGGTACTTGGGCATTGTGGCTGGTTCAACTGCTGCTGTGTTTATACCAGTATATCTTCAGGACAATGTTGGGTGGGGTGTGGGGTTAGGAGTATTGGCAGGAGTGTTGGCATTGGCATTGGCACTCTTCCTATTGGGAATCAAAAGGTACAGAAAGGAAAGCCCTACAGGGAGTCCATTTACAAGACTGGCCCAAGTTTTTGTCGCCGCAGCTCGCAAGTGGCGCGTGCAAGACACTCTCCTTCATAGCAACAATTTTTGCCATAGTGAAGAGGAGAAAGATGAGCCTCATCATGTTCATGTTCGACCTAAATATCATACTTTGCTCCATACAAATCAATATAGATTTTTGGACAAAGCAGCAATAATTGATGAAGTTGATTTCTCAAACAAAACAAGAAATCCATGGAGATTATGTTCAGTGACTCAAGTTGAAGAAGTGAAACTAGTTCTTCGTCTAATCCCTGTATGGCTAACTTGTTTAATGTTCACTGTTGTTCAAGCTCAAGTACACACATATTTCACCAAACAAGGTGGCACATTAATCCATACCCTAGGATCAAAATTTCAATTCCCTCCAGCATCACTTCAAGGCCTCGTCGGAGTCACGATCCTTTTCGTTGTTCCAATATACGACCGAGTCTTCGTGCCACTTGCTAGAAAATTCACCGGTCACCCAAATGGGATAACCGTGTTGCAAAGAATCGGAGTTGGTTTATTTTTATCTATACTCACAATGGTTGTTTCGGCTCTTGTAGAAACGAAAAGGGTTAATGTTGCTAAAAGTCACGGTCTAATAGACGATCAAAGTGCAATACTACCGATGTATATTTGGTGGTTACTTCCTCAATATATGATCACCGGCATCTCTGATGCGTTTACTATCGTTGGATTACAAGAAATTTTTTATGATCAAATGCCGGACGGACTGAGAAGTTTGGGAGCCGCGGCGTATATAAGTATAGTAGGAGTTGGAAGCTTTGTTAGTAACATTATAATTGAAGTTGTTGAGGCAATTAGTGCAAAAGCTGGTGAGAAATGGTTGGGAGATAACATCAATAGGGCACACCTTGATGATTATTATTGGGTTATGGCTGTGTTAAGTGCTGTTAATTTGGGTGTTTATATGTGGATTGCAAAGTGTTTTGAGTATAAAAAGGTAGATGGAGATGAAAGAAGTAACCAAGAGGGTTCTGGCTACAATAGATATCGTTCTGGAGTGTAG
Protein sequence

>MsG0880043634.01.T01

MADSPSKSKSNSLIHHSTTKKGGWNAAIFIIFVEFAERFAYQGLASNLINYLTKFLNEPTTTAVKNVNTWVGVSSLFPLLGGFIADSYLGRFNTILLSSLIYLVGMIFLTLSVSALRHKTLFFFALYVLSIGEGGHKPCVQTFAADQFDDDTPEEKDAKSSFFNWWYLGIVAGSTAAVFIPVYLQDNVGWGVGLGVLAGVLALALALFLLGIKRYRKESPTGSPFTRLAQVFVAAARKWRVQDTLLHSNNFCHSEEEKDEPHHVHVRPKYHTLLHTNQYRFLDKAAIIDEVDFSNKTRNPWRLCSVTQVEEVKLVLRLIPVWLTCLMFTVVQAQVHTYFTKQGGTLIHTLGSKFQFPPASLQGLVGVTILFVVPIYDRVFVPLARKFTGHPNGITVLQRIGVGLFLSILTMVVSALVETKRVNVAKSHGLIDDQSAILPMYIWWLLPQYMITGISDAFTIVGLQEIFYDQMPDGLRSLGAAAYISIVGVGSFVSNIIIEVVEAISAKAGEKWLGDNINRAHLDDYYWVMAVLSAVNLGVYMWIAKCFEYKKVDGDERSNQEGSGYNRYRSGV*