AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044968.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044968.01.T02 MTR_4g102440 95.556 270 12 0 1 270 1 270 7.96e-180 499
MsG0880044968.01.T02 MTR_5g011220 76.793 237 50 3 36 270 29 262 5.24e-129 370
MsG0880044968.01.T01 MTR_4g102440 95.556 270 12 0 1 270 1 270 7.96e-180 499
MsG0880044968.01.T01 MTR_5g011220 76.793 237 50 3 36 270 29 262 5.24e-129 370
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044968.01.T02 AT4G22890 79.741 232 42 3 39 270 45 271 9.81e-131 374
MsG0880044968.01.T02 AT4G22890 79.741 232 42 3 39 270 45 271 1.42e-130 374
MsG0880044968.01.T02 AT4G22890 79.741 232 42 3 39 270 45 271 1.42e-130 374
MsG0880044968.01.T02 AT4G22890 79.310 232 40 3 39 270 45 268 7.75e-130 372
MsG0880044968.01.T02 AT4G22890 78.879 232 42 3 39 270 45 269 1.10e-128 370
MsG0880044968.01.T02 AT4G11960 73.684 266 64 4 7 271 1 261 1.16e-128 369
MsG0880044968.01.T02 AT4G11960 84.729 203 30 1 68 270 42 243 4.55e-123 354
MsG0880044968.01.T01 AT4G22890 79.741 232 42 3 39 270 45 271 9.81e-131 374
MsG0880044968.01.T01 AT4G22890 79.741 232 42 3 39 270 45 271 1.42e-130 374
MsG0880044968.01.T01 AT4G22890 79.741 232 42 3 39 270 45 271 1.42e-130 374
MsG0880044968.01.T01 AT4G22890 79.310 232 40 3 39 270 45 268 7.75e-130 372
MsG0880044968.01.T01 AT4G22890 78.879 232 42 3 39 270 45 269 1.10e-128 370
MsG0880044968.01.T01 AT4G11960 73.684 266 64 4 7 271 1 261 1.16e-128 369
MsG0880044968.01.T01 AT4G11960 84.729 203 30 1 68 270 42 243 4.55e-123 354

Find 86 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGCATCGGAAACTGAATT+TGG 0.203024 8:+52244123 None:intergenic
TCGAATTCGGGATCGGGATT+AGG 0.231335 8:-52243979 MsG0880044968.01.T01:five_prime_UTR
AAATGAGGTGAGACAGTAAA+TGG 0.264956 8:-52243853 MsG0880044968.01.T01:five_prime_UTR
AGAATGGAATAAAGGGAGTT+TGG 0.277890 8:+52243540 None:intergenic
TTCCAGATCGAGATCGAATT+CGG 0.292727 8:-52243992 MsG0880044968.01.T01:five_prime_UTR
GGTATAGGCGTTCTTTCTTC+TGG 0.302007 8:-52243922 MsG0880044968.01.T01:five_prime_UTR
CGAATTCGGGATCGGGATTA+GGG 0.304213 8:-52243978 MsG0880044968.01.T01:five_prime_UTR
ATCCAACGGTTGTTGAGGTT+TGG 0.359805 8:-52244043 MsG0880044968.01.T01:five_prime_UTR
GAATGGAATAAAGGGAGTTT+GGG 0.363798 8:+52243541 None:intergenic
TGTTGATCTGCAGTGGCTTT+AGG 0.383078 8:+52243443 None:intergenic
CGGTGATCTTCGTCGGATAC+AGG 0.388813 8:-52244291 MsG0880044968.01.T01:intron
TCGGGATTAGGGTTAGGATT+GGG 0.406072 8:-52243967 MsG0880044968.01.T01:five_prime_UTR
AGATTCGAAAATTAATTGAA+TGG 0.409244 8:+52244181 None:intergenic
GATTCGAAAATTAATTGAAT+GGG 0.410464 8:+52244182 None:intergenic
CTTTCGAGAACTGTAGTAAG+AGG 0.412524 8:+52243880 None:intergenic
TCATCTTCTGCATCGGATAC+AGG 0.419954 8:-52244246 MsG0880044968.01.T01:intron
TTAGGGTTAGGATTGGGATT+GGG 0.427133 8:-52243961 MsG0880044968.01.T01:five_prime_UTR
ATTGGGATTGGGAATGGTTG+AGG 0.428097 8:-52243950 MsG0880044968.01.T01:five_prime_UTR
CTGCATCGGAAACTGAATTT+GGG 0.438313 8:+52244124 None:intergenic
TTTCAAAGACAGTTGGCAAC+CGG 0.441146 8:+52243761 None:intergenic
TCGGGATCGGGATTAGGGTT+AGG 0.441889 8:-52243973 MsG0880044968.01.T01:five_prime_UTR
TCGAGATCGAATTCGGGATC+GGG 0.453351 8:-52243985 MsG0880044968.01.T01:five_prime_UTR
GGCGCCGGCAGGATTCGATT+TGG 0.454204 8:-52244094 MsG0880044968.01.T01:five_prime_UTR
ATCGAGATCGAATTCGGGAT+CGG 0.455294 8:-52243986 MsG0880044968.01.T01:five_prime_UTR
TCCAGATCGAGATCGAATTC+GGG 0.460052 8:-52243991 MsG0880044968.01.T01:five_prime_UTR
GGTGCAGAACATGGAGGAGG+GGG 0.462753 8:+52243563 None:intergenic
AATGAGGTGAGACAGTAAAT+GGG 0.469355 8:-52243852 MsG0880044968.01.T01:five_prime_UTR
TGTTAAAGTGAAGGCTACTT+TGG 0.472750 8:+52243586 None:intergenic
AGAGCAGTTGCTTGGAGATA+AGG 0.476938 8:+52243702 None:intergenic
TTGGGAATGGTTGAGGAAGA+AGG 0.481759 8:-52243943 MsG0880044968.01.T01:five_prime_UTR
GTTAGGATTGGGATTGGGAA+TGG 0.483600 8:-52243956 MsG0880044968.01.T01:five_prime_UTR
TGGGGTGCAGAACATGGAGG+AGG 0.491120 8:+52243560 None:intergenic
TCCCGAATTCGATCTCGATC+TGG 0.492294 8:+52243990 None:intergenic
GTATGAAAGTGAAGAGGAAG+AGG 0.496234 8:+52244146 None:intergenic
ATTAGGGTTAGGATTGGGAT+TGG 0.497119 8:-52243962 MsG0880044968.01.T01:five_prime_UTR
GCAGAGACAGTGGCGCCGGC+AGG 0.506364 8:-52244105 MsG0880044968.01.T01:five_prime_UTR
GGGTGCAGAACATGGAGGAG+GGG 0.507293 8:+52243562 None:intergenic
TCGGATACAGGCGGCGACGG+AGG 0.509570 8:-52244279 MsG0880044968.01.T01:intron
GCGGCGAAGGCATACGTGGC+GGG 0.513672 8:+52243484 None:intergenic
ATCGGGATTAGGGTTAGGAT+TGG 0.513980 8:-52243968 MsG0880044968.01.T01:five_prime_UTR
GGAGTTTGGGGTGCAGAACA+TGG 0.522105 8:+52243554 None:intergenic
ACAGGCGGCAACGGAGGAGA+AGG 0.535875 8:-52244228 MsG0880044968.01.T01:intron
TGAAGAGGAAGAGGATGAAG+AGG 0.539186 8:+52244155 None:intergenic
CAGTGGCTTTAGGCGAAAGT+AGG 0.539506 8:+52243453 None:intergenic
GCATCGGATACAGGCGGCAA+CGG 0.540294 8:-52244237 MsG0880044968.01.T01:intron
CGGATACAGGCGGCGACGGA+GGG 0.544792 8:-52244278 MsG0880044968.01.T01:intron
CGGCGCCACTGTCTCTGCAT+CGG 0.546447 8:+52244110 None:intergenic
AAGACAGTTGGCAACCGGCT+AGG 0.549811 8:+52243766 None:intergenic
CGATGCAGAGACAGTGGCGC+CGG 0.550948 8:-52244109 MsG0880044968.01.T01:five_prime_UTR
ATGGTTGAGGAAGAAGGTAT+AGG 0.551649 8:-52243937 MsG0880044968.01.T01:five_prime_UTR
GGGGTGCAGAACATGGAGGA+GGG 0.555413 8:+52243561 None:intergenic
ATCCAAACCTCAACAACCGT+TGG 0.559731 8:+52244041 None:intergenic
TTGATATCCAACGGTTGTTG+AGG 0.560071 8:-52244048 MsG0880044968.01.T01:five_prime_UTR
TACTTTGGTAGCAGTGAACA+TGG 0.562646 8:+52243601 None:intergenic
TCGGATACAGGCGGCAACGG+AGG 0.569882 8:-52244234 MsG0880044968.01.T01:intron
GTAGGAGTAATCTGCGGCGA+AGG 0.572243 8:+52243471 None:intergenic
TTTGCGGCGGTGATCTTCGT+CGG 0.575399 8:-52244298 MsG0880044968.01.T01:five_prime_UTR
ATGAGGTGAGACAGTAAATG+GGG 0.575953 8:-52243851 MsG0880044968.01.T01:five_prime_UTR
TCGTCGGATACAGGCGGCGA+CGG 0.576304 8:-52244282 MsG0880044968.01.T01:intron
GTCGTCATCATCTTCTGCAT+CGG 0.579479 8:-52244253 MsG0880044968.01.T01:intron
ATCTGCGGCGAAGGCATACG+TGG 0.603458 8:+52243480 None:intergenic
AAAACCAAATCGAATCCTGC+CGG 0.604286 8:+52244090 None:intergenic
GATACCTTGTTGATCTGCAG+TGG 0.611032 8:+52243436 None:intergenic
GTTCTCGAAAGAAATAAATG+AGG 0.615526 8:-52243868 MsG0880044968.01.T01:five_prime_UTR
AAGGCAATGAGAACGTGTGG+AGG 0.623604 8:+52243721 None:intergenic
GATAAGGCAATGAGAACGTG+TGG 0.626746 8:+52243718 None:intergenic
GAGGTGAGACAGTAAATGGG+GGG 0.632172 8:-52243849 MsG0880044968.01.T01:five_prime_UTR
TGAGGTGAGACAGTAAATGG+GGG 0.632498 8:-52243850 MsG0880044968.01.T01:five_prime_UTR
ACGTGTGGAGGGAAATGCAA+CGG 0.638647 8:+52243733 None:intergenic
AGTTTCCGATGCAGAGACAG+TGG 0.639561 8:-52244115 MsG0880044968.01.T01:five_prime_UTR
AATCTAGCGTTGATATCCAA+CGG 0.645227 8:-52244057 MsG0880044968.01.T01:five_prime_UTR
AGGCAATGAGAACGTGTGGA+GGG 0.645810 8:+52243722 None:intergenic
GCAGTGAACATGGTGAATGG+TGG 0.648017 8:+52243611 None:intergenic
GTAGCAGTGAACATGGTGAA+TGG 0.651238 8:+52243608 None:intergenic
TGCGGCGAAGGCATACGTGG+CGG 0.660060 8:+52243483 None:intergenic
ATTTGGGTATGAAAGTGAAG+AGG 0.662435 8:+52244140 None:intergenic
TGTAGTAAGAGGATGAGTCG+AGG 0.667945 8:+52243891 None:intergenic
AATGGAATAAAGGGAGTTTG+GGG 0.668538 8:+52243542 None:intergenic
CTAATACACATACGAACCAG+TGG 0.676394 8:-52244401 MsG0880044968.01.T02:five_prime_UTR
ACGTGGCGGGAGTTGAAGTG+AGG 0.680548 8:+52243497 None:intergenic
TGATCTTCGTCGGATACAGG+CGG 0.685091 8:-52244288 MsG0880044968.01.T01:intron
AGGTGAGACAGTAAATGGGG+GGG 0.685975 8:-52243848 MsG0880044968.01.T01:five_prime_UTR
AAAGCCACTGCAGATCAACA+AGG 0.689088 8:-52243440 MsG0880044968.01.T01:intron
TCTTCTGCATCGGATACAGG+CGG 0.693921 8:-52244243 MsG0880044968.01.T01:intron
GTTTGGGGTGCAGAACATGG+AGG 0.719853 8:+52243557 None:intergenic
GCGAAAGTAGGAGTAATCTG+CGG 0.775526 8:+52243465 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATTTGTTTTGTTTAATT+TGG + Chr8:52240917-52240936 None:intergenic 10.0%
!!! AATAAATTATTTTTTTTGAC+TGG - Chr8:52240245-52240264 MsG0880044968.01.T01:CDS 10.0%
!!! AATATCTTTTTCATTATAAT+TGG + Chr8:52244057-52244076 None:intergenic 10.0%
!!! CTGATTATTTAAATTTTAAA+AGG - Chr8:52244289-52244308 MsG0880044968.01.T01:intron 10.0%
!! ACTCTTATATATATGAATAA+TGG - Chr8:52241882-52241901 MsG0880044968.01.T01:intron 15.0%
!! ATAAAATAGATAAAATGACA+TGG + Chr8:52241299-52241318 None:intergenic 15.0%
!!! ATTTGTTTATATTTGAGATT+GGG - Chr8:52242562-52242581 MsG0880044968.01.T01:CDS 15.0%
!!! ATTTTATTTTGTGTGTAAAT+TGG - Chr8:52241170-52241189 MsG0880044968.01.T01:intron 15.0%
!!! TAAACAAAACAAATTTTTCT+CGG - Chr8:52240920-52240939 MsG0880044968.01.T01:intron 15.0%
!!! TATAACAGATATTGATATTT+TGG - Chr8:52244091-52244110 MsG0880044968.01.T01:five_prime_UTR 15.0%
!! AAGAAAATAAGAAACAAGTT+TGG + Chr8:52241540-52241559 None:intergenic 20.0%
!! AATAAAATGTTAGAAAGGAA+AGG + Chr8:52243823-52243842 None:intergenic 20.0%
!! AATAATAAGTATGCAATTCT+AGG + Chr8:52243742-52243761 None:intergenic 20.0%
!! AATCACAAAATCTTTGATAA+TGG + Chr8:52244213-52244232 None:intergenic 20.0%
!! ACAAAAATTGGATACTAATA+TGG + Chr8:52243528-52243547 None:intergenic 20.0%
!! AGAATTGCATACTTATTATT+TGG - Chr8:52243742-52243761 MsG0880044968.01.T01:five_prime_UTR 20.0%
!! AGATTCGAAAATTAATTGAA+TGG + Chr8:52240388-52240407 None:intergenic 20.0%
!! ATAAATGATAAAACGTATGT+AGG + Chr8:52242904-52242923 None:intergenic 20.0%
!! ATGGAGATTATAAAATATGT+AGG + Chr8:52243509-52243528 None:intergenic 20.0%
!! GAATTGCATACTTATTATTT+GGG - Chr8:52243743-52243762 MsG0880044968.01.T01:five_prime_UTR 20.0%
!! GATAAGTATTAAGTAAAAAG+TGG + Chr8:52241364-52241383 None:intergenic 20.0%
!! GATTCGAAAATTAATTGAAT+GGG + Chr8:52240387-52240406 None:intergenic 20.0%
!! GGAATAAAGAATAAAAAAAC+TGG + Chr8:52240782-52240801 None:intergenic 20.0%
!! TAAATGATAAAACGTATGTA+GGG + Chr8:52242903-52242922 None:intergenic 20.0%
!! TATTATAAAATATGATTCGC+TGG + Chr8:52243979-52243998 None:intergenic 20.0%
!! TGTTATATGATCATATATCA+TGG + Chr8:52243284-52243303 None:intergenic 20.0%
!!! AAACTGGAAATTGATTTTTA+AGG + Chr8:52240766-52240785 None:intergenic 20.0%
!!! ACTTATTACAGTCTTTTTAT+AGG - Chr8:52242780-52242799 MsG0880044968.01.T01:CDS 20.0%
!!! ATACTTATCATTTTTCTTTC+AGG - Chr8:52241375-52241394 MsG0880044968.01.T01:intron 20.0%
!!! ATTTGGAGTGTTAAAAAAAA+TGG + Chr8:52240900-52240919 None:intergenic 20.0%
!!! CAAAGATTTTGTGATTTTAA+AGG - Chr8:52244217-52244236 MsG0880044968.01.T01:five_prime_UTR 20.0%
!!! CTATATTCTTATTTCAGTTT+TGG - Chr8:52242431-52242450 MsG0880044968.01.T01:intron 20.0%
!!! GATTTGTTTATATTTGAGAT+TGG - Chr8:52242561-52242580 MsG0880044968.01.T01:CDS 20.0%
!!! TACTTATCATTTTTCTTTCA+GGG - Chr8:52241376-52241395 MsG0880044968.01.T01:intron 20.0%
!!! TTATTTTCGTATAATCTGTA+TGG - Chr8:52241592-52241611 MsG0880044968.01.T01:intron 20.0%
!!! TTTGGAGTGTTAAAAAAAAT+GGG + Chr8:52240899-52240918 None:intergenic 20.0%
! AAAATAAGAAACAAGTTTGG+TGG + Chr8:52241537-52241556 None:intergenic 25.0%
! AAAATTTCTTGAAGCTTCTA+TGG - Chr8:52241976-52241995 MsG0880044968.01.T01:intron 25.0%
! AAATAAGAAACAAGTTTGGT+GGG + Chr8:52241536-52241555 None:intergenic 25.0%
! AAGGCAATAAAATGTTAGAA+AGG + Chr8:52243828-52243847 None:intergenic 25.0%
! AAGTATTAAGTAAAAAGTGG+AGG + Chr8:52241361-52241380 None:intergenic 25.0%
! AGAAAAAGAGAATGGAATAA+AGG + Chr8:52241037-52241056 None:intergenic 25.0%
! AGAAGATATAAAAACTCCAA+TGG + Chr8:52243876-52243895 None:intergenic 25.0%
! AGATGTAGTACTATATCATT+TGG - Chr8:52242159-52242178 MsG0880044968.01.T01:intron 25.0%
! AGTTGATCTAACCTTTAATT+TGG + Chr8:52242186-52242205 None:intergenic 25.0%
! ATCCATCTTTCTTAAATCAA+AGG - Chr8:52243549-52243568 MsG0880044968.01.T01:CDS 25.0%
! ATTTACTAGAATTCAACTTC+AGG - Chr8:52242685-52242704 MsG0880044968.01.T01:intron 25.0%
! CAAGTGAAAATGAAACTAAA+AGG + Chr8:52244140-52244159 None:intergenic 25.0%
! CAATGCTGAATAATAAATAC+AGG - Chr8:52242510-52242529 MsG0880044968.01.T01:intron 25.0%
! GAAAAAGAGAATGGAATAAA+GGG + Chr8:52241036-52241055 None:intergenic 25.0%
! GAAAGTGAAAATAGAACATA+TGG - Chr8:52243043-52243062 MsG0880044968.01.T01:intron 25.0%
! TAACAGTCATTCTATTATGA+GGG - Chr8:52241754-52241773 MsG0880044968.01.T01:CDS 25.0%
! TATCATTTGGACCAAATTAA+AGG - Chr8:52242172-52242191 MsG0880044968.01.T01:intron 25.0%
! TTAACAGTCATTCTATTATG+AGG - Chr8:52241753-52241772 MsG0880044968.01.T01:CDS 25.0%
! TTGTAGCATAGATCAAAAAA+AGG - Chr8:52241452-52241471 MsG0880044968.01.T01:intron 25.0%
! TTTGATCTATGCTACAATAT+GGG + Chr8:52241449-52241468 None:intergenic 25.0%
!! AACCTTTGATTTAAGAAAGA+TGG + Chr8:52243554-52243573 None:intergenic 25.0%
!! CATTCATATATTTGATTTCG+AGG - Chr8:52243126-52243145 MsG0880044968.01.T01:CDS 25.0%
!! TAAGTTGAAACTGAATCTAA+AGG - Chr8:52242042-52242061 MsG0880044968.01.T01:intron 25.0%
!! TGAAGAATTTGATAATCTCA+AGG - Chr8:52241795-52241814 MsG0880044968.01.T01:intron 25.0%
!! TTGGAGTGTTAAAAAAAATG+GGG + Chr8:52240898-52240917 None:intergenic 25.0%
!! TTTATTGCCTTTTAAATCCA+TGG - Chr8:52243837-52243856 MsG0880044968.01.T01:five_prime_UTR 25.0%
!! TTTTATTCTTTATTCCTAGC+CGG - Chr8:52240786-52240805 MsG0880044968.01.T01:intron 25.0%
!! TTTTGATCTATGCTACAATA+TGG + Chr8:52241450-52241469 None:intergenic 25.0%
!!! AGTTTTTTACACGATTTTGT+AGG - Chr8:52244244-52244263 MsG0880044968.01.T01:intron 25.0%
!!! ATCAGTTCTATTTGTTATAC+TGG - Chr8:52242238-52242257 MsG0880044968.01.T01:intron 25.0%
!!! ATTTTTTACTGTAGATGCTT+TGG + Chr8:52240205-52240224 None:intergenic 25.0%
!!! CTTTTAGTTTCATTTTCACT+TGG - Chr8:52244138-52244157 MsG0880044968.01.T01:five_prime_UTR 25.0%
!!! GCATTTTATTTGACATGAAA+TGG + Chr8:52242659-52242678 None:intergenic 25.0%
!!! GTTTTTTTTCCATCATCAAA+TGG + Chr8:52243957-52243976 None:intergenic 25.0%
!!! TATTTTTTTTGACTGGTTTG+CGG - Chr8:52240252-52240271 MsG0880044968.01.T01:CDS 25.0%
!!! TCAGTTCTATTTGTTATACT+GGG - Chr8:52242239-52242258 MsG0880044968.01.T01:intron 25.0%
!!! TGAAAGTACATTTTTGCTTT+AGG - Chr8:52243591-52243610 MsG0880044968.01.T01:CDS 25.0%
!!! TGACTTGTGTTGATTTATAA+TGG - Chr8:52242926-52242945 MsG0880044968.01.T01:intron 25.0%
AAAATGAAACTAAAAGGCTC+CGG + Chr8:52244134-52244153 None:intergenic 30.0%
ACTATACTGTCAATTTCAAG+TGG - Chr8:52244355-52244374 MsG0880044968.01.T01:five_prime_UTR 30.0%
ACTTCTGCCAAATATATGAT+TGG - Chr8:52243015-52243034 MsG0880044968.01.T01:intron 30.0%
AGTAGAATGTTGACATCAAA+TGG + Chr8:52242968-52242987 None:intergenic 30.0%
ATAGAGCTAGATATACAATG+AGG + Chr8:52244178-52244197 None:intergenic 30.0%
ATCATATATTTGGCAGAAGT+AGG + Chr8:52243015-52243034 None:intergenic 30.0%
ATCATCAAATGGTAATCCAT+TGG + Chr8:52243946-52243965 None:intergenic 30.0%
CAAATCCAGTTATATCATCA+AGG + Chr8:52243677-52243696 None:intergenic 30.0%
CAAGTAGTGACAAGAAATAT+AGG - Chr8:52242629-52242648 MsG0880044968.01.T01:intron 30.0%
GAAACAGAAGAAAAAGAGAA+TGG + Chr8:52241045-52241064 None:intergenic 30.0%
GAAAGATGGATGACAAAAAT+TGG + Chr8:52243540-52243559 None:intergenic 30.0%
GACATCAAATGGTTAATCAA+AGG + Chr8:52242957-52242976 None:intergenic 30.0%
GATATCTGGACTAAAATTTG+TGG - Chr8:52241712-52241731 MsG0880044968.01.T01:CDS 30.0%
GGAGTGGAATTAAAAGTTAA+AGG + Chr8:52243632-52243651 None:intergenic 30.0%
GTCATATGACTGATATTAGT+AGG + Chr8:52242594-52242613 None:intergenic 30.0%
GTTCTCGAAAGAAATAAATG+AGG - Chr8:52240698-52240717 MsG0880044968.01.T01:intron 30.0%
TAGAGCTAGATATACAATGA+GGG + Chr8:52244177-52244196 None:intergenic 30.0%
TATGACTTAAGCGTCTATTT+GGG - Chr8:52243179-52243198 MsG0880044968.01.T01:intron 30.0%
TCTTTAAATAGTCAACAGAC+AGG + Chr8:52242816-52242835 None:intergenic 30.0%
TTATCGAAAGAGAGACTTAA+TGG + Chr8:52241563-52241582 None:intergenic 30.0%
TTGTTGAATTACTGTTGTGT+AGG - Chr8:52241941-52241960 MsG0880044968.01.T01:intron 30.0%
! AGAATTTGATAATCTCAAGG+AGG - Chr8:52241798-52241817 MsG0880044968.01.T01:intron 30.0%
! AGGATTTTACCCTATCATTT+GGG - Chr8:52242705-52242724 MsG0880044968.01.T01:intron 30.0%
! ATACTGTTCAACACAACTTT+TGG - Chr8:52241690-52241709 MsG0880044968.01.T01:intron 30.0%
! ATCGTTTATTTGAGTCTTGT+TGG - Chr8:52241198-52241217 MsG0880044968.01.T01:intron 30.0%
! ATTGTGTCACTGGTAATTAA+AGG - Chr8:52242131-52242150 MsG0880044968.01.T01:intron 30.0%
! TCTGAGACCAATCATATATT+TGG + Chr8:52243025-52243044 None:intergenic 30.0%
! TGACAGTAGTTGCATTTTTA+AGG - Chr8:52243796-52243815 MsG0880044968.01.T01:five_prime_UTR 30.0%
! TTCTTCCTTGATGATATAAC+TGG - Chr8:52243669-52243688 MsG0880044968.01.T01:five_prime_UTR 30.0%
!! AATGGATTACCATTTGATGA+TGG - Chr8:52243945-52243964 MsG0880044968.01.T01:five_prime_UTR 30.0%
!! ATTTTGTTGCTTGCGTAATT+TGG - Chr8:52243335-52243354 MsG0880044968.01.T01:intron 30.0%
!! TTTCATTTTCACTTGGTTTG+CGG - Chr8:52244145-52244164 MsG0880044968.01.T01:five_prime_UTR 30.0%
AAAAAGGAGAAGAAATCCGT+TGG - Chr8:52241468-52241487 MsG0880044968.01.T01:intron 35.0%
AAAAATGAAGAGCAGTTGCT+TGG + Chr8:52240875-52240894 None:intergenic 35.0%
AAATGAGGTGAGACAGTAAA+TGG - Chr8:52240713-52240732 MsG0880044968.01.T01:intron 35.0%
AATGAGGTGAGACAGTAAAT+GGG - Chr8:52240714-52240733 MsG0880044968.01.T01:intron 35.0%
AATGGAATAAAGGGAGTTTG+GGG + Chr8:52241027-52241046 None:intergenic 35.0%
ACTGAAAATACCTCCTTCTT+TGG - Chr8:52244331-52244350 MsG0880044968.01.T01:five_prime_UTR 35.0%
ACTGCTTCCATGGATTTAAA+AGG + Chr8:52243847-52243866 None:intergenic 35.0%
AGAAGAATCTAACAGATCAC+AGG + Chr8:52243653-52243672 None:intergenic 35.0%
AGAATGGAATAAAGGGAGTT+TGG + Chr8:52241029-52241048 None:intergenic 35.0%
AGAGCTAGATATACAATGAG+GGG + Chr8:52244176-52244195 None:intergenic 35.0%
AGCATGTAGAATATGACATC+AGG + Chr8:52243486-52243505 None:intergenic 35.0%
ATGAAAAAAATATCCCCTGC+AGG - Chr8:52243898-52243917 MsG0880044968.01.T01:five_prime_UTR 35.0%
ATTAGAGAGCAAAATGCCAA+TGG - Chr8:52243927-52243946 MsG0880044968.01.T01:five_prime_UTR 35.0%
ATTTGGGTATGAAAGTGAAG+AGG + Chr8:52240429-52240448 None:intergenic 35.0%
CAGTAAATTATGCCAGAAAG+AGG + Chr8:52242315-52242334 None:intergenic 35.0%
CCTAATTTAACCAAGGTCTT+GGG + Chr8:52241270-52241289 None:intergenic 35.0%
CTATGACTTAAGCGTCTATT+TGG - Chr8:52243178-52243197 MsG0880044968.01.T01:intron 35.0%
CTGAAAATACCTCCTTCTTT+GGG - Chr8:52244332-52244351 MsG0880044968.01.T01:five_prime_UTR 35.0%
GAATGGAATAAAGGGAGTTT+GGG + Chr8:52241028-52241047 None:intergenic 35.0%
GAATTACTGTTGTGTAGGTT+CGG - Chr8:52241946-52241965 MsG0880044968.01.T01:intron 35.0%
GGCATAATTTACTGAACTCA+TGG - Chr8:52242321-52242340 MsG0880044968.01.T01:intron 35.0%
GTAGTGACAAGAAATATAGG+AGG - Chr8:52242632-52242651 MsG0880044968.01.T01:intron 35.0%
GTCATTCTATTATGAGGGAA+AGG - Chr8:52241759-52241778 MsG0880044968.01.T01:CDS 35.0%
GTTCTCTCCTAATTTAACCA+AGG + Chr8:52241277-52241296 None:intergenic 35.0%
GTTGTGTTGAACAGTATCAA+CGG + Chr8:52241687-52241706 None:intergenic 35.0%
TAAAACGTATGTAGGGAAAC+AGG + Chr8:52242896-52242915 None:intergenic 35.0%
TACTCTTTGTCGCTCAAAAT+TGG + Chr8:52242019-52242038 None:intergenic 35.0%
TCCTAATTTAACCAAGGTCT+TGG + Chr8:52241271-52241290 None:intergenic 35.0%
TGAAAAAAATATCCCCTGCA+GGG - Chr8:52243899-52243918 MsG0880044968.01.T01:five_prime_UTR 35.0%
TGTTAAAGTGAAGGCTACTT+TGG + Chr8:52240983-52241002 None:intergenic 35.0%
! AGAGCATTTGACTTTGTTGT+TGG + Chr8:52244386-52244405 None:intergenic 35.0%
! AGTTTGGTGGGATATATACT+TGG + Chr8:52241524-52241543 None:intergenic 35.0%
! ATACTGTCAATTTCAAGTGG+TGG - Chr8:52244358-52244377 MsG0880044968.01.T01:five_prime_UTR 35.0%
! ATTTTTCTTTCAGGGAATGC+TGG - Chr8:52241384-52241403 MsG0880044968.01.T01:intron 35.0%
! CAACACAACTTTTGGATATC+TGG - Chr8:52241698-52241717 MsG0880044968.01.T01:intron 35.0%
! CACTTACCTTTTTACTTCGA+AGG + Chr8:52242399-52242418 None:intergenic 35.0%
! CAGGATTTTACCCTATCATT+TGG - Chr8:52242704-52242723 MsG0880044968.01.T01:intron 35.0%
! GAAAAGTCTTCTGTGTTTTG+TGG - Chr8:52242096-52242115 MsG0880044968.01.T01:intron 35.0%
! GGATGAGTTTTGCAAATCTA+TGG + Chr8:52244036-52244055 None:intergenic 35.0%
! GTTTTGTATCTTCCTCTTTC+TGG - Chr8:52242300-52242319 MsG0880044968.01.T01:intron 35.0%
! TCTATTTGGGAAGGTGATTT+TGG - Chr8:52243192-52243211 MsG0880044968.01.T01:intron 35.0%
! TGAGATCACTTATTTGCTAG+AGG - Chr8:52243695-52243714 MsG0880044968.01.T01:five_prime_UTR 35.0%
!! AATCTAGCGTTGATATCCAA+CGG - Chr8:52240509-52240528 MsG0880044968.01.T01:intron 35.0%
!! ATCTAGCTCTATCACTAACA+AGG - Chr8:52244186-52244205 MsG0880044968.01.T01:five_prime_UTR 35.0%
!! GGCTTATTTTCAAAGACAGT+TGG + Chr8:52240815-52240834 None:intergenic 35.0%
!! TCTAGCTCTATCACTAACAA+GGG - Chr8:52244187-52244206 MsG0880044968.01.T01:five_prime_UTR 35.0%
AAAACCAAATCGAATCCTGC+CGG + Chr8:52240479-52240498 None:intergenic 40.0%
AATCTAACAGATCACAGGAG+TGG + Chr8:52243648-52243667 None:intergenic 40.0%
ACTCGTCAATCCCAAATGAT+AGG + Chr8:52242718-52242737 None:intergenic 40.0%
ACTTAAGCGTCTATTTGGGA+AGG - Chr8:52243183-52243202 MsG0880044968.01.T01:intron 40.0%
ATCTCAAGGAGGAACTTATG+TGG - Chr8:52241809-52241828 MsG0880044968.01.T01:intron 40.0%
ATGAGGTGAGACAGTAAATG+GGG - Chr8:52240715-52240734 MsG0880044968.01.T01:intron 40.0%
ATGGTGATAAACTGCTTCCA+TGG + Chr8:52243857-52243876 None:intergenic 40.0%
ATTAGGGTTAGGATTGGGAT+TGG - Chr8:52240604-52240623 MsG0880044968.01.T01:intron 40.0%
CAGTGTTGTCATGCTAAGTA+TGG - Chr8:52241840-52241859 MsG0880044968.01.T01:intron 40.0%
CCCAAGACCTTGGTTAAATT+AGG - Chr8:52241267-52241286 MsG0880044968.01.T01:intron 40.0%
CTAATACACATACGAACCAG+TGG - Chr8:52240165-52240184 MsG0880044968.01.T01:CDS 40.0%
CTCGTCAATCCCAAATGATA+GGG + Chr8:52242717-52242736 None:intergenic 40.0%
CTGCATCGGAAACTGAATTT+GGG + Chr8:52240445-52240464 None:intergenic 40.0%
CTTTCGAGAACTGTAGTAAG+AGG + Chr8:52240689-52240708 None:intergenic 40.0%
GATCTATGCTACAATATGGG+AGG + Chr8:52241446-52241465 None:intergenic 40.0%
GCTTCTATGGCTTATGTATC+TGG - Chr8:52241989-52242008 MsG0880044968.01.T01:intron 40.0%
GGTTGCATTAGGATTGTAAG+TGG - Chr8:52242864-52242883 MsG0880044968.01.T01:intron 40.0%
GTATGAAAGTGAAGAGGAAG+AGG + Chr8:52240423-52240442 None:intergenic 40.0%
TCCTTTCTATCCCTTCCTTA+GGG + Chr8:52243411-52243430 None:intergenic 40.0%
TCTCAAGGAGGAACTTATGT+GGG - Chr8:52241810-52241829 MsG0880044968.01.T01:intron 40.0%
TCTCTAATGTTTACCCTGCA+GGG + Chr8:52243915-52243934 None:intergenic 40.0%
TCTGCATCGGAAACTGAATT+TGG + Chr8:52240446-52240465 None:intergenic 40.0%
TGAAGTCATCATTGTGTCAC+TGG - Chr8:52242121-52242140 MsG0880044968.01.T01:intron 40.0%
TGACAGTATAGTCCCAAAGA+AGG + Chr8:52244347-52244366 None:intergenic 40.0%
TGGAAGCAGTTTATCACCAT+TGG - Chr8:52243857-52243876 MsG0880044968.01.T01:five_prime_UTR 40.0%
TGTCAGATGCTATGACATTC+TGG + Chr8:52243781-52243800 None:intergenic 40.0%
TTAGGGTTAGGATTGGGATT+GGG - Chr8:52240605-52240624 MsG0880044968.01.T01:intron 40.0%
TTCCAGATCGAGATCGAATT+CGG - Chr8:52240574-52240593 MsG0880044968.01.T01:intron 40.0%
TTCCTTTCTATCCCTTCCTT+AGG + Chr8:52243412-52243431 None:intergenic 40.0%
TTCTTGCTCAAGTTCACCAA+CGG + Chr8:52241487-52241506 None:intergenic 40.0%
TTGATATCCAACGGTTGTTG+AGG - Chr8:52240518-52240537 MsG0880044968.01.T01:intron 40.0%
TTTAACCAAGGTCTTGGGTT+CGG + Chr8:52241265-52241284 None:intergenic 40.0%
TTTCAAAGACAGTTGGCAAC+CGG + Chr8:52240808-52240827 None:intergenic 40.0%
! AAATTGTTGTTGAGGGTCCA+AGG - Chr8:52242368-52242387 MsG0880044968.01.T01:intron 40.0%
! AGGGAGTGAAATTGTTGTTG+AGG - Chr8:52242360-52242379 MsG0880044968.01.T01:intron 40.0%
! ATGGTTGAGGAAGAAGGTAT+AGG - Chr8:52240629-52240648 MsG0880044968.01.T01:intron 40.0%
! ATTTGGGAAGGTGATTTTGG+AGG - Chr8:52243195-52243214 MsG0880044968.01.T01:intron 40.0%
! GGGAGTGAAATTGTTGTTGA+GGG - Chr8:52242361-52242380 MsG0880044968.01.T01:intron 40.0%
! GTATTTTCAGTTCCGCAGTT+TGG + Chr8:52244322-52244341 None:intergenic 40.0%
! TACTTTGGTAGCAGTGAACA+TGG + Chr8:52240968-52240987 None:intergenic 40.0%
! TTTGGGAAGGTGATTTTGGA+GGG - Chr8:52243196-52243215 MsG0880044968.01.T01:intron 40.0%
!! AAGGTGATTTTGGAGGGTTT+TGG - Chr8:52243202-52243221 MsG0880044968.01.T01:intron 40.0%
!! ATGGTTGTTTTCCAGAGAGA+AGG - Chr8:52242340-52242359 MsG0880044968.01.T01:intron 40.0%
!! GGTTGATTTTTACTTGCCAC+TGG + Chr8:52240184-52240203 None:intergenic 40.0%
!! TGGTTGTTTTCCAGAGAGAA+GGG - Chr8:52242341-52242360 MsG0880044968.01.T01:intron 40.0%
!!! TGATTTTGGAGGGTTTTGGA+GGG - Chr8:52243206-52243225 MsG0880044968.01.T01:intron 40.0%
!!! TTTTTTTGACTGGTTTGCGG+CGG - Chr8:52240255-52240274 MsG0880044968.01.T01:CDS 40.0%
AAAGCCACTGCAGATCAACA+AGG - Chr8:52241126-52241145 MsG0880044968.01.T01:intron 45.0%
AAGGAGGAACTTATGTGGGA+AGG - Chr8:52241814-52241833 MsG0880044968.01.T01:intron 45.0%
ACCCTAAGGAAGGGATAGAA+AGG - Chr8:52243407-52243426 MsG0880044968.01.T01:intron 45.0%
AGAGCAGTTGCTTGGAGATA+AGG + Chr8:52240867-52240886 None:intergenic 45.0%
ATCCAAACCTCAACAACCGT+TGG + Chr8:52240528-52240547 None:intergenic 45.0%
ATCCAACGGTTGTTGAGGTT+TGG - Chr8:52240523-52240542 MsG0880044968.01.T01:intron 45.0%
ATCGAGATCGAATTCGGGAT+CGG - Chr8:52240580-52240599 MsG0880044968.01.T01:intron 45.0%
ATCGGGATTAGGGTTAGGAT+TGG - Chr8:52240598-52240617 MsG0880044968.01.T01:intron 45.0%
ATTGGGATTGGGAATGGTTG+AGG - Chr8:52240616-52240635 MsG0880044968.01.T01:intron 45.0%
CAATCCTAATGCAACCACAG+TGG + Chr8:52242860-52242879 None:intergenic 45.0%
CAATTTCACTCCCTTCTCTC+TGG + Chr8:52242354-52242373 None:intergenic 45.0%
CAGTATAGTCCCAAAGAAGG+AGG + Chr8:52244344-52244363 None:intergenic 45.0%
CCCAAACATACCCTAAGGAA+GGG - Chr8:52243398-52243417 MsG0880044968.01.T01:intron 45.0%
CCCTTCCTTAGGGTATGTTT+GGG + Chr8:52243401-52243420 None:intergenic 45.0%
CTCTAATGTTTACCCTGCAG+GGG + Chr8:52243914-52243933 None:intergenic 45.0%
CTCTCTAATGTTTACCCTGC+AGG + Chr8:52243916-52243935 None:intergenic 45.0%
GATAAGGCAATGAGAACGTG+TGG + Chr8:52240851-52240870 None:intergenic 45.0%
GATACCTTGTTGATCTGCAG+TGG + Chr8:52241133-52241152 None:intergenic 45.0%
GCGAAAGTAGGAGTAATCTG+CGG + Chr8:52241104-52241123 None:intergenic 45.0%
GGTATAGGCGTTCTTTCTTC+TGG - Chr8:52240644-52240663 MsG0880044968.01.T01:intron 45.0%
GTAGCAGTGAACATGGTGAA+TGG + Chr8:52240961-52240980 None:intergenic 45.0%
GTCGTCATCATCTTCTGCAT+CGG - Chr8:52240313-52240332 MsG0880044968.01.T01:intron 45.0%
GTGCAGCCTTCGAAGTAAAA+AGG - Chr8:52242390-52242409 MsG0880044968.01.T01:intron 45.0%
GTTAGGATTGGGATTGGGAA+TGG - Chr8:52240610-52240629 MsG0880044968.01.T01:intron 45.0%
GTTGGACGACTCAAAATGAG+TGG - Chr8:52241216-52241235 MsG0880044968.01.T01:intron 45.0%
TCATCTTCTGCATCGGATAC+AGG - Chr8:52240320-52240339 MsG0880044968.01.T01:intron 45.0%
TCCAGATCGAGATCGAATTC+GGG - Chr8:52240575-52240594 MsG0880044968.01.T01:intron 45.0%
TCCCAAACATACCCTAAGGA+AGG - Chr8:52243397-52243416 MsG0880044968.01.T01:intron 45.0%
TCCCTTCCTTAGGGTATGTT+TGG + Chr8:52243402-52243421 None:intergenic 45.0%
TCCTTAGGGTATGTTTGGGA+GGG + Chr8:52243397-52243416 None:intergenic 45.0%
TCGGGATTAGGGTTAGGATT+GGG - Chr8:52240599-52240618 MsG0880044968.01.T01:intron 45.0%
TGAAGAGGAAGAGGATGAAG+AGG + Chr8:52240414-52240433 None:intergenic 45.0%
TGAGGTGAGACAGTAAATGG+GGG - Chr8:52240716-52240735 MsG0880044968.01.T01:intron 45.0%
TGTAGTAAGAGGATGAGTCG+AGG + Chr8:52240678-52240697 None:intergenic 45.0%
TGTTGATCTGCAGTGGCTTT+AGG + Chr8:52241126-52241145 None:intergenic 45.0%
TTCCTTAGGGTATGTTTGGG+AGG + Chr8:52243398-52243417 None:intergenic 45.0%
TTGGGAATGGTTGAGGAAGA+AGG - Chr8:52240623-52240642 MsG0880044968.01.T01:intron 45.0%
! GGGAATGCTGGAGATTTTGA+CGG - Chr8:52241396-52241415 MsG0880044968.01.T01:intron 45.0%
!! GTGATTTTGGAGGGTTTTGG+AGG - Chr8:52243205-52243224 MsG0880044968.01.T01:intron 45.0%
AAAGGTCCCTGTCCAAACTG+CGG - Chr8:52244307-52244326 MsG0880044968.01.T01:five_prime_UTR 50.0%
AAGGCAATGAGAACGTGTGG+AGG + Chr8:52240848-52240867 None:intergenic 50.0%
ACGTGTGGAGGGAAATGCAA+CGG + Chr8:52240836-52240855 None:intergenic 50.0%
AGGCAATGAGAACGTGTGGA+GGG + Chr8:52240847-52240866 None:intergenic 50.0%
AGGTGAGACAGTAAATGGGG+GGG - Chr8:52240718-52240737 MsG0880044968.01.T01:intron 50.0%
AGTTTCCGATGCAGAGACAG+TGG - Chr8:52240451-52240470 MsG0880044968.01.T01:intron 50.0%
CCTTAGGGTATGTTTGGGAG+GGG + Chr8:52243396-52243415 None:intergenic 50.0%
CGAATTCGGGATCGGGATTA+GGG - Chr8:52240588-52240607 MsG0880044968.01.T01:intron 50.0%
CTAATGCAACCACAGTGGCT+GGG + Chr8:52242855-52242874 None:intergenic 50.0%
CTTAGGGTATGTTTGGGAGG+GGG + Chr8:52243395-52243414 None:intergenic 50.0%
GAGGTGAGACAGTAAATGGG+GGG - Chr8:52240717-52240736 MsG0880044968.01.T01:intron 50.0%
GCAGTGAACATGGTGAATGG+TGG + Chr8:52240958-52240977 None:intergenic 50.0%
TCAGTTCCGCAGTTTGGACA+GGG + Chr8:52244316-52244335 None:intergenic 50.0%
TCCCGAATTCGATCTCGATC+TGG + Chr8:52240579-52240598 None:intergenic 50.0%
TCGAATTCGGGATCGGGATT+AGG - Chr8:52240587-52240606 MsG0880044968.01.T01:intron 50.0%
TCGAGATCGAATTCGGGATC+GGG - Chr8:52240581-52240600 MsG0880044968.01.T01:intron 50.0%
TCTTCTGCATCGGATACAGG+CGG - Chr8:52240323-52240342 MsG0880044968.01.T01:intron 50.0%
TGATCTTCGTCGGATACAGG+CGG - Chr8:52240278-52240297 MsG0880044968.01.T01:intron 50.0%
TTACTTCGAAGGCTGCACCT+TGG + Chr8:52242388-52242407 None:intergenic 50.0%
TTAGGGTATGTTTGGGAGGG+GGG + Chr8:52243394-52243413 None:intergenic 50.0%
TTCAGTTCCGCAGTTTGGAC+AGG + Chr8:52244317-52244336 None:intergenic 50.0%
! AGTAAATGGGGGGGTGTAAC+TGG - Chr8:52240727-52240746 MsG0880044968.01.T01:intron 50.0%
! TATGTTTGGGAGGGGGGTTT+TGG + Chr8:52243388-52243407 None:intergenic 50.0%
!! AGGAGGGGGTGTTAAAGTGA+AGG + Chr8:52240992-52241011 None:intergenic 50.0%
!! CAGTGGCTTTAGGCGAAAGT+AGG + Chr8:52241116-52241135 None:intergenic 50.0%
AAGACAGTTGGCAACCGGCT+AGG + Chr8:52240803-52240822 None:intergenic 55.0%
CAAGTCCGAACCCAAGACCT+TGG - Chr8:52241257-52241276 MsG0880044968.01.T01:intron 55.0%
CCAGCCACTGTGGTTGCATT+AGG - Chr8:52242853-52242872 MsG0880044968.01.T01:intron 55.0%
CCCCTCCCAAACATACCCTA+AGG - Chr8:52243393-52243412 MsG0880044968.01.T01:intron 55.0%
CCTAATGCAACCACAGTGGC+TGG + Chr8:52242856-52242875 None:intergenic 55.0%
CGGTGATCTTCGTCGGATAC+AGG - Chr8:52240275-52240294 MsG0880044968.01.T01:intron 55.0%
GGATTGTTGAGTGCAGCTGC+CGG - Chr8:52244112-52244131 MsG0880044968.01.T01:five_prime_UTR 55.0%
GTAGGAGTAATCTGCGGCGA+AGG + Chr8:52241098-52241117 None:intergenic 55.0%
TCGGGATCGGGATTAGGGTT+AGG - Chr8:52240593-52240612 MsG0880044968.01.T01:intron 55.0%
TTTGCGGCGGTGATCTTCGT+CGG - Chr8:52240268-52240287 MsG0880044968.01.T01:intron 55.0%
! GGAGTTTGGGGTGCAGAACA+TGG + Chr8:52241015-52241034 None:intergenic 55.0%
! GTTTGGGGTGCAGAACATGG+AGG + Chr8:52241012-52241031 None:intergenic 55.0%
!!! TTTGGGAGGGGGGTTTTGGA+GGG + Chr8:52243384-52243403 None:intergenic 55.0%
GCATCGGATACAGGCGGCAA+CGG - Chr8:52240329-52240348 MsG0880044968.01.T01:intron 60.0%
GGGGTGCAGAACATGGAGGA+GGG + Chr8:52241008-52241027 None:intergenic 60.0%
GGGTGCAGAACATGGAGGAG+GGG + Chr8:52241007-52241026 None:intergenic 60.0%
GGTGCAGAACATGGAGGAGG+GGG + Chr8:52241006-52241025 None:intergenic 60.0%
TGGGGTGCAGAACATGGAGG+AGG + Chr8:52241009-52241028 None:intergenic 60.0%
! ACGTGGCGGGAGTTGAAGTG+AGG + Chr8:52241072-52241091 None:intergenic 60.0%
! ATCTGCGGCGAAGGCATACG+TGG + Chr8:52241089-52241108 None:intergenic 60.0%
!! GTTTGGGAGGGGGGTTTTGG+AGG + Chr8:52243385-52243404 None:intergenic 60.0%
!!! AGGGGGGTTTTGGAGGGAAG+GGG + Chr8:52243378-52243397 None:intergenic 60.0%
!!! GAGGGGGGTTTTGGAGGGAA+GGG + Chr8:52243379-52243398 None:intergenic 60.0%
ACAGGCGGCAACGGAGGAGA+AGG - Chr8:52240338-52240357 MsG0880044968.01.T01:intron 65.0%
CAGTGGCTGGGACGTTCAGC+AGG + Chr8:52242843-52242862 None:intergenic 65.0%
CGATGCAGAGACAGTGGCGC+CGG - Chr8:52240457-52240476 MsG0880044968.01.T01:intron 65.0%
CGGCGCCACTGTCTCTGCAT+CGG + Chr8:52240459-52240478 None:intergenic 65.0%
GCTGAACGTCCCAGCCACTG+TGG - Chr8:52242843-52242862 MsG0880044968.01.T01:intron 65.0%
TCGGATACAGGCGGCAACGG+AGG - Chr8:52240332-52240351 MsG0880044968.01.T01:intron 65.0%
TCGTCGGATACAGGCGGCGA+CGG - Chr8:52240284-52240303 MsG0880044968.01.T01:intron 65.0%
! TGCGGCGAAGGCATACGTGG+CGG + Chr8:52241086-52241105 None:intergenic 65.0%
!! GGCGCCGGCAGGATTCGATT+TGG - Chr8:52240472-52240491 MsG0880044968.01.T01:intron 65.0%
!!! GGAGGGGGGTTTTGGAGGGA+AGG + Chr8:52243380-52243399 None:intergenic 65.0%
!!! GGGGTTTTGGAGGGAAGGGG+AGG + Chr8:52243375-52243394 None:intergenic 65.0%
CGGATACAGGCGGCGACGGA+GGG - Chr8:52240288-52240307 MsG0880044968.01.T01:intron 70.0%
TCGGATACAGGCGGCGACGG+AGG - Chr8:52240287-52240306 MsG0880044968.01.T01:intron 70.0%
! GCGGCGAAGGCATACGTGGC+GGG + Chr8:52241085-52241104 None:intergenic 70.0%
!! GCAGAGACAGTGGCGCCGGC+AGG - Chr8:52240461-52240480 MsG0880044968.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 52240155 52244433 52240155 ID=MsG0880044968.01;Name=MsG0880044968.01
Chr8 mRNA 52240155 52244416 52240155 ID=MsG0880044968.01.T01;Parent=MsG0880044968.01;Name=MsG0880044968.01.T01;_AED=0.49;_eAED=0.52;_QI=750|0.88|0.9|1|0.88|0.8|10|0|308
Chr8 exon 52243441 52244246 52243441 ID=MsG0880044968.01.T01:exon:22325;Parent=MsG0880044968.01.T01
Chr8 exon 52244292 52244416 52244292 ID=MsG0880044968.01.T01:exon:22324;Parent=MsG0880044968.01.T01
Chr8 five_prime_UTR 52244292 52244416 52244292 ID=MsG0880044968.01.T01:five_prime_utr;Parent=MsG0880044968.01.T01
Chr8 five_prime_UTR 52243622 52244246 52243622 ID=MsG0880044968.01.T01:five_prime_utr;Parent=MsG0880044968.01.T01
Chr8 CDS 52243441 52243621 52243441 ID=MsG0880044968.01.T01:cds;Parent=MsG0880044968.01.T01
Chr8 CDS 52243064 52243191 52243064 ID=MsG0880044968.01.T01:cds;Parent=MsG0880044968.01.T01
Chr8 CDS 52242732 52242828 52242732 ID=MsG0880044968.01.T01:cds;Parent=MsG0880044968.01.T01
Chr8 CDS 52242525 52242625 52242525 ID=MsG0880044968.01.T01:cds;Parent=MsG0880044968.01.T01
Chr8 CDS 52242177 52242233 52242177 ID=MsG0880044968.01.T01:cds;Parent=MsG0880044968.01.T01
Chr8 CDS 52241710 52241786 52241710 ID=MsG0880044968.01.T01:cds;Parent=MsG0880044968.01.T01
Chr8 CDS 52240872 52240923 52240872 ID=MsG0880044968.01.T01:cds;Parent=MsG0880044968.01.T01
Chr8 CDS 52240350 52240460 52240350 ID=MsG0880044968.01.T01:cds;Parent=MsG0880044968.01.T01
Chr8 CDS 52240155 52240277 52240155 ID=MsG0880044968.01.T01:cds;Parent=MsG0880044968.01.T01
Chr8 mRNA 52240155 52244433 52240155 ID=MsG0880044968.01.T02;Parent=MsG0880044968.01;Name=MsG0880044968.01.T02;_AED=0.49;_eAED=0.52;_QI=812|0.87|0.88|1|1|1|9|0|308
Chr8 exon 52243441 52244433 52243441 ID=MsG0880044968.01.T02:exon:22334;Parent=MsG0880044968.01.T02
Chr8 five_prime_UTR 52243622 52244433 52243622 ID=MsG0880044968.01.T02:five_prime_utr;Parent=MsG0880044968.01.T02
Chr8 CDS 52243441 52243621 52243441 ID=MsG0880044968.01.T02:cds;Parent=MsG0880044968.01.T02
Chr8 CDS 52243064 52243191 52243064 ID=MsG0880044968.01.T02:cds;Parent=MsG0880044968.01.T02
Chr8 CDS 52242732 52242828 52242732 ID=MsG0880044968.01.T02:cds;Parent=MsG0880044968.01.T02
Chr8 CDS 52242525 52242625 52242525 ID=MsG0880044968.01.T02:cds;Parent=MsG0880044968.01.T02
Chr8 CDS 52242177 52242233 52242177 ID=MsG0880044968.01.T02:cds;Parent=MsG0880044968.01.T02
Chr8 CDS 52241710 52241786 52241710 ID=MsG0880044968.01.T02:cds;Parent=MsG0880044968.01.T02
Chr8 CDS 52240872 52240923 52240872 ID=MsG0880044968.01.T02:cds;Parent=MsG0880044968.01.T02
Chr8 CDS 52240350 52240460 52240350 ID=MsG0880044968.01.T02:cds;Parent=MsG0880044968.01.T02
Chr8 CDS 52240155 52240277 52240155 ID=MsG0880044968.01.T02:cds;Parent=MsG0880044968.01.T02
Gene Sequence

>MsG0880044968.01.T02

ATGTTCACTGCTACCAAAGTAGCCTTCACTTTAACACCCCCTCCTCCATGTTCTGCACCCCAAACTCCCTTTATTCCATTCTCTTTTTCTTCTGTTTCTCGTCCTCACTTCAACTCCCGCCACGTATGCCTTCGCCGCAGATTACTCCTACTTTCGCCTAAAGCCACTGCAGATCAACAAGGGAATGCTGGAGATTTTGACGGAGATGCTGTTATTGATACTAATGTCCTCCCATATTGTAGCATAGATCAAAAAAAGGAGAAGAAATCCGTTGGTGAACTTGAGCAAGAATTTCTTCAAGCACTCCAATCATTCTATTATGAGGGAAAGGCTATTATGTCAAATGAAGAATTTGATAATCTCAAGGAGGAACTTATGTGGGAAGGAAGCAGTGTTGTCATGCTAAGTTCGGATGAACAAAAATTTCTTGAAGCTTCTATGGCTTATGTATCTGGAAATCCAATTTTGAGCGACAAAGAGTATGATAAGTTGAAACTGAATCTAAAGAGAGAAGGGAGTGAAATTGTTGTTGAGGGTCCAAGGTGCAGCCTTCGAAGTAAAAAGGTTTACAGTGACCTGTCTGTTGACTATTTAAAGATGTTCCTGCTGAACGTCCCAGCCACTGTGGTTGCATTAGGATTATTCTTCTTCCTTGATGATATAACTGGATTTGAGATCACTTATTTGCTAGAGCTGCCGGAGCCTTTTAGTTTCATTTTCACTTGGTTTGCGGCTGTTCCCCTCATTGTATATCTAGCTCTATCACTAACAAGGGCCATTATCAAAGATTTTGTGATTTTAAAGGTCCCTGTCCAAACTGCGGAACTGAAAATACCTCCTTCTTTGGGACTATACTGTCAATTTCAAGTGGTGGTTCCAACAACAAAGTCAAATGCTCTGAGTAAGTACAAAAATACTGCTGACTAA

>MsG0880044968.01.T01

ATGTTCACTGCTACCAAAGTAGCCTTCACTTTAACACCCCCTCCTCCATGTTCTGCACCCCAAACTCCCTTTATTCCATTCTCTTTTTCTTCTGTTTCTCGTCCTCACTTCAACTCCCGCCACGTATGCCTTCGCCGCAGATTACTCCTACTTTCGCCTAAAGCCACTGCAGATCAACAAGGGAATGCTGGAGATTTTGACGGAGATGCTGTTATTGATACTAATGTCCTCCCATATTGTAGCATAGATCAAAAAAAGGAGAAGAAATCCGTTGGTGAACTTGAGCAAGAATTTCTTCAAGCACTCCAATCATTCTATTATGAGGGAAAGGCTATTATGTCAAATGAAGAATTTGATAATCTCAAGGAGGAACTTATGTGGGAAGGAAGCAGTGTTGTCATGCTAAGTTCGGATGAACAAAAATTTCTTGAAGCTTCTATGGCTTATGTATCTGGAAATCCAATTTTGAGCGACAAAGAGTATGATAAGTTGAAACTGAATCTAAAGAGAGAAGGGAGTGAAATTGTTGTTGAGGGTCCAAGGTGCAGCCTTCGAAGTAAAAAGGTTTACAGTGACCTGTCTGTTGACTATTTAAAGATGTTCCTGCTGAACGTCCCAGCCACTGTGGTTGCATTAGGATTATTCTTCTTCCTTGATGATATAACTGGATTTGAGATCACTTATTTGCTAGAGCTGCCGGAGCCTTTTAGTTTCATTTTCACTTGGTTTGCGGCTGTTCCCCTCATTGTATATCTAGCTCTATCACTAACAAGGGCCATTATCAAAGATTTTGTGATTTTAAAGGTCCCTGTCCAAACTGCGGAACTGAAAATACCTCCTTCTTTGGGACTATACTGTCAATTTCAAGTGGTGGTTCCAACAACAAAGTCAAATGCTCTGAGTAAGTACAAAAATACTGCTGACTAA

Protein sequence

>MsG0880044968.01.T02

MFTATKVAFTLTPPPPCSAPQTPFIPFSFSSVSRPHFNSRHVCLRRRLLLLSPKATADQQGNAGDFDGDAVIDTNVLPYCSIDQKKEKKSVGELEQEFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILSDKEYDKLKLNLKREGSEIVVEGPRCSLRSKKVYSDLSVDYLKMFLLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSFIFTWFAAVPLIVYLALSLTRAIIKDFVILKVPVQTAELKIPPSLGLYCQFQVVVPTTKSNALSKYKNTAD*

>MsG0880044968.01.T01

MFTATKVAFTLTPPPPCSAPQTPFIPFSFSSVSRPHFNSRHVCLRRRLLLLSPKATADQQGNAGDFDGDAVIDTNVLPYCSIDQKKEKKSVGELEQEFLQALQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILSDKEYDKLKLNLKREGSEIVVEGPRCSLRSKKVYSDLSVDYLKMFLLNVPATVVALGLFFFLDDITGFEITYLLELPEPFSFIFTWFAAVPLIVYLALSLTRAIIKDFVILKVPVQTAELKIPPSLGLYCQFQVVVPTTKSNALSKYKNTAD*