Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045263.01.T01 | XP_003628902.1 | 97.785 | 316 | 6 | 1 | 1 | 316 | 1 | 315 | 0 | 630 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045263.01.T01 | Q9SB52 | 74.214 | 318 | 75 | 2 | 1 | 316 | 1 | 313 | 5.15E-168 | 472 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045263.01.T01 | G7LIL2 | 97.785 | 316 | 6 | 1 | 1 | 316 | 1 | 315 | 0.0 | 630 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0180004953.01 | MsG0880045263.01 | PPI |
| MsG0480023074.01 | MsG0880045263.01 | PPI |
| MsG0480018798.01 | MsG0880045263.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045263.01.T01 | MTR_8g068890 | 97.785 | 316 | 6 | 1 | 1 | 316 | 1 | 315 | 0.0 | 630 |
| MsG0880045263.01.T01 | MTR_5g032420 | 81.366 | 322 | 54 | 4 | 1 | 316 | 1 | 322 | 1.71e-178 | 496 |
| MsG0880045263.01.T01 | MTR_3g100570 | 74.763 | 317 | 75 | 3 | 1 | 316 | 1 | 313 | 2.65e-173 | 483 |
| MsG0880045263.01.T01 | MTR_8g086070 | 38.941 | 321 | 150 | 6 | 3 | 316 | 18 | 299 | 8.39e-67 | 211 |
| MsG0880045263.01.T01 | MTR_7g066690 | 36.977 | 311 | 167 | 5 | 6 | 314 | 17 | 300 | 2.84e-61 | 197 |
| MsG0880045263.01.T01 | MTR_4g018750 | 36.422 | 313 | 170 | 6 | 6 | 316 | 15 | 300 | 1.67e-60 | 195 |
| MsG0880045263.01.T01 | MTR_1g090330 | 33.333 | 303 | 176 | 4 | 11 | 312 | 19 | 296 | 6.93e-54 | 178 |
| MsG0880045263.01.T01 | MTR_3g462140 | 33.013 | 312 | 183 | 3 | 4 | 314 | 13 | 299 | 2.90e-50 | 169 |
| MsG0880045263.01.T01 | MTR_4g018750 | 34.783 | 276 | 151 | 6 | 6 | 279 | 15 | 263 | 5.14e-44 | 152 |
| MsG0880045263.01.T01 | MTR_4g018750 | 28.324 | 173 | 119 | 3 | 144 | 311 | 31 | 203 | 2.04e-15 | 75.5 |
| MsG0880045263.01.T01 | MTR_8g086070 | 38.961 | 231 | 98 | 5 | 3 | 229 | 18 | 209 | 2.30e-43 | 148 |
| MsG0880045263.01.T01 | MTR_1g088995 | 30.945 | 307 | 179 | 4 | 6 | 312 | 33 | 306 | 1.92e-41 | 146 |
| MsG0880045263.01.T01 | MTR_1g088995 | 29.596 | 223 | 125 | 3 | 6 | 228 | 33 | 223 | 3.31e-21 | 90.9 |
| MsG0880045263.01.T01 | MTR_4g057850 | 25.402 | 311 | 190 | 9 | 7 | 309 | 23 | 299 | 1.23e-18 | 85.1 |
| MsG0880045263.01.T01 | MTR_4g057850 | 28.426 | 197 | 120 | 4 | 115 | 303 | 9 | 192 | 8.77e-13 | 68.2 |
| MsG0880045263.01.T01 | MTR_1g087840 | 26.441 | 295 | 188 | 9 | 22 | 313 | 35 | 303 | 1.81e-16 | 79.0 |
| MsG0880045263.01.T01 | MTR_4g012850 | 22.684 | 313 | 201 | 6 | 6 | 313 | 16 | 292 | 2.81e-16 | 78.2 |
| MsG0880045263.01.T01 | MTR_4g012850 | 28.910 | 211 | 115 | 6 | 9 | 217 | 117 | 294 | 5.59e-16 | 77.4 |
| MsG0880045263.01.T01 | MTR_8g027975 | 24.484 | 339 | 193 | 12 | 4 | 313 | 49 | 353 | 1.48e-15 | 76.6 |
| MsG0880045263.01.T01 | MTR_1g097890 | 24.359 | 312 | 178 | 7 | 4 | 313 | 49 | 304 | 2.27e-15 | 75.9 |
| MsG0880045263.01.T01 | MTR_5g009500 | 21.557 | 334 | 207 | 8 | 4 | 313 | 36 | 338 | 5.71e-15 | 75.1 |
| MsG0880045263.01.T01 | MTR_5g055410 | 27.483 | 302 | 176 | 12 | 22 | 313 | 37 | 305 | 3.47e-14 | 72.8 |
| MsG0880045263.01.T01 | MTR_2g102010 | 24.579 | 297 | 182 | 6 | 4 | 294 | 15 | 275 | 3.62e-14 | 72.0 |
| MsG0880045263.01.T01 | MTR_2g102010 | 25.397 | 189 | 113 | 4 | 22 | 208 | 126 | 288 | 8.97e-11 | 62.0 |
| MsG0880045263.01.T01 | MTR_3g104500 | 22.340 | 282 | 196 | 7 | 44 | 314 | 53 | 322 | 8.72e-14 | 71.2 |
| MsG0880045263.01.T01 | MTR_4g119770 | 24.036 | 337 | 206 | 12 | 5 | 316 | 17 | 328 | 1.08e-13 | 71.2 |
| MsG0880045263.01.T01 | MTR_4g088545 | 28.495 | 186 | 124 | 4 | 130 | 310 | 14 | 195 | 1.50e-13 | 69.3 |
| MsG0880045263.01.T01 | MTR_4g088545 | 28.495 | 186 | 124 | 4 | 130 | 310 | 14 | 195 | 1.99e-13 | 69.7 |
| MsG0880045263.01.T01 | MTR_5g073040 | 25.159 | 314 | 191 | 7 | 11 | 316 | 40 | 317 | 2.05e-13 | 70.1 |
| MsG0880045263.01.T01 | MTR_4g088545 | 28.495 | 186 | 124 | 4 | 130 | 310 | 14 | 195 | 2.84e-13 | 69.7 |
| MsG0880045263.01.T01 | MTR_4g088545 | 23.006 | 326 | 204 | 9 | 2 | 313 | 8 | 300 | 8.20e-12 | 65.5 |
| MsG0880045263.01.T01 | MTR_7g109135 | 26.214 | 309 | 197 | 9 | 9 | 313 | 25 | 306 | 4.53e-13 | 69.3 |
| MsG0880045263.01.T01 | MTR_5g030530 | 25.723 | 311 | 197 | 8 | 9 | 313 | 14 | 296 | 7.25e-13 | 68.2 |
| MsG0880045263.01.T01 | MTR_4g114320 | 24.490 | 245 | 168 | 6 | 76 | 315 | 164 | 396 | 8.91e-13 | 68.9 |
| MsG0880045263.01.T01 | MTR_6g091800 | 25.943 | 212 | 133 | 6 | 115 | 311 | 5 | 207 | 1.24e-12 | 67.8 |
| MsG0880045263.01.T01 | MTR_8g096050 | 24.923 | 325 | 178 | 11 | 6 | 313 | 227 | 502 | 2.88e-12 | 67.4 |
| MsG0880045263.01.T01 | MTR_8g092080 | 22.642 | 318 | 180 | 9 | 4 | 315 | 50 | 307 | 5.98e-12 | 65.9 |
| MsG0880045263.01.T01 | MTR_8g076760 | 22.801 | 307 | 195 | 9 | 21 | 314 | 29 | 306 | 6.94e-12 | 65.5 |
| MsG0880045263.01.T01 | MTR_7g068340 | 30.337 | 178 | 105 | 6 | 144 | 315 | 103 | 267 | 8.25e-12 | 65.9 |
| MsG0880045263.01.T01 | MTR_8g066975 | 26.183 | 317 | 188 | 12 | 9 | 313 | 14 | 296 | 1.26e-11 | 64.7 |
| MsG0880045263.01.T01 | MTR_7g109135 | 25.890 | 309 | 191 | 10 | 9 | 313 | 25 | 299 | 3.33e-11 | 63.5 |
| MsG0880045263.01.T01 | MTR_6g034515 | 24.590 | 305 | 167 | 9 | 21 | 310 | 82 | 338 | 4.08e-11 | 63.5 |
| MsG0880045263.01.T01 | MTR_3g098460 | 25.309 | 324 | 182 | 12 | 4 | 313 | 203 | 480 | 4.88e-11 | 63.5 |
| MsG0880045263.01.T01 | MTR_7g064980 | 21.515 | 330 | 209 | 11 | 3 | 316 | 22 | 317 | 4.96e-11 | 63.2 |
| MsG0880045263.01.T01 | MTR_1g012030 | 23.457 | 243 | 170 | 6 | 76 | 313 | 179 | 410 | 5.33e-11 | 63.5 |
| MsG0880045263.01.T01 | MTR_7g117030 | 24.465 | 327 | 212 | 10 | 12 | 315 | 23 | 337 | 8.35e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045263.01.T01 | AT4G24570 | 74.214 | 318 | 75 | 2 | 1 | 316 | 1 | 313 | 5.25e-169 | 472 |
| MsG0880045263.01.T01 | AT2G22500 | 75.316 | 316 | 73 | 1 | 1 | 316 | 1 | 311 | 6.56e-166 | 464 |
| MsG0880045263.01.T01 | AT5G09470 | 59.882 | 339 | 107 | 6 | 1 | 315 | 1 | 334 | 4.33e-125 | 361 |
| MsG0880045263.01.T01 | AT5G19760 | 39.498 | 319 | 147 | 5 | 3 | 314 | 15 | 294 | 6.28e-70 | 219 |
| MsG0880045263.01.T01 | AT5G58970 | 38.535 | 314 | 160 | 6 | 6 | 313 | 12 | 298 | 3.64e-65 | 207 |
| MsG0880045263.01.T01 | AT3G54110 | 37.898 | 314 | 168 | 6 | 4 | 316 | 13 | 300 | 2.98e-63 | 202 |
| MsG0880045263.01.T01 | AT1G14140 | 33.987 | 306 | 171 | 4 | 11 | 312 | 21 | 299 | 4.19e-52 | 174 |
| MsG0880045263.01.T01 | AT1G14140 | 27.094 | 203 | 122 | 2 | 9 | 211 | 121 | 297 | 3.15e-13 | 69.7 |
| MsG0880045263.01.T01 | AT4G03115 | 32.797 | 311 | 171 | 5 | 3 | 312 | 35 | 308 | 1.44e-46 | 160 |
| MsG0880045263.01.T01 | AT4G03115 | 32.476 | 311 | 172 | 5 | 3 | 312 | 67 | 340 | 2.57e-46 | 160 |
| MsG0880045263.01.T01 | AT5G58970 | 37.751 | 249 | 129 | 5 | 6 | 248 | 12 | 240 | 5.16e-44 | 152 |
| MsG0880045263.01.T01 | AT5G58970 | 26.590 | 173 | 122 | 3 | 144 | 311 | 32 | 204 | 2.64e-18 | 83.6 |
| MsG0880045263.01.T01 | AT4G03115 | 33.858 | 254 | 155 | 4 | 60 | 312 | 4 | 245 | 3.30e-42 | 146 |
| MsG0880045263.01.T01 | AT4G03115 | 34.583 | 240 | 144 | 4 | 74 | 312 | 10 | 237 | 9.04e-41 | 142 |
| MsG0880045263.01.T01 | AT4G03115 | 30.396 | 227 | 121 | 4 | 3 | 228 | 35 | 225 | 1.83e-24 | 99.4 |
| MsG0880045263.01.T01 | AT4G03115 | 30.396 | 227 | 121 | 4 | 3 | 228 | 35 | 225 | 2.41e-24 | 99.0 |
| MsG0880045263.01.T01 | AT5G01340 | 26.433 | 314 | 194 | 8 | 7 | 314 | 18 | 300 | 3.84e-22 | 94.7 |
| MsG0880045263.01.T01 | AT5G01340 | 27.869 | 183 | 125 | 3 | 122 | 303 | 11 | 187 | 2.13e-11 | 64.3 |
| MsG0880045263.01.T01 | AT1G25380 | 26.910 | 301 | 184 | 9 | 22 | 315 | 37 | 308 | 3.51e-16 | 78.6 |
| MsG0880045263.01.T01 | AT1G25380 | 26.910 | 301 | 184 | 9 | 22 | 315 | 37 | 308 | 3.51e-16 | 78.6 |
| MsG0880045263.01.T01 | AT5G56450 | 25.100 | 251 | 165 | 7 | 75 | 314 | 88 | 326 | 7.50e-16 | 77.4 |
| MsG0880045263.01.T01 | AT2G33820 | 24.848 | 330 | 191 | 11 | 5 | 313 | 13 | 306 | 1.02e-15 | 76.6 |
| MsG0880045263.01.T01 | AT5G46800 | 26.332 | 319 | 188 | 12 | 9 | 313 | 14 | 299 | 1.86e-15 | 75.9 |
| MsG0880045263.01.T01 | AT5G46800 | 22.535 | 213 | 145 | 3 | 110 | 313 | 1 | 202 | 5.80e-11 | 62.8 |
| MsG0880045263.01.T01 | AT5G46800 | 26.332 | 319 | 188 | 12 | 9 | 313 | 14 | 299 | 1.86e-15 | 75.9 |
| MsG0880045263.01.T01 | AT5G46800 | 22.535 | 213 | 145 | 3 | 110 | 313 | 1 | 202 | 5.80e-11 | 62.8 |
| MsG0880045263.01.T01 | AT5G46800 | 26.332 | 319 | 188 | 12 | 9 | 313 | 14 | 299 | 1.86e-15 | 75.9 |
| MsG0880045263.01.T01 | AT5G46800 | 22.535 | 213 | 145 | 3 | 110 | 313 | 1 | 202 | 5.80e-11 | 62.8 |
| MsG0880045263.01.T01 | AT3G53940 | 24.465 | 327 | 195 | 10 | 3 | 313 | 70 | 360 | 1.94e-15 | 76.6 |
| MsG0880045263.01.T01 | AT1G34065 | 24.204 | 314 | 180 | 7 | 4 | 315 | 80 | 337 | 3.27e-15 | 75.9 |
| MsG0880045263.01.T01 | AT1G34065 | 23.567 | 314 | 182 | 6 | 4 | 315 | 73 | 330 | 3.41e-15 | 75.5 |
| MsG0880045263.01.T01 | AT4G01100 | 25.000 | 340 | 190 | 12 | 4 | 313 | 40 | 344 | 4.73e-15 | 75.5 |
| MsG0880045263.01.T01 | AT4G01100 | 24.779 | 339 | 206 | 13 | 4 | 313 | 40 | 358 | 1.51e-14 | 73.9 |
| MsG0880045263.01.T01 | AT4G01100 | 26.792 | 265 | 157 | 9 | 78 | 313 | 38 | 294 | 7.89e-14 | 71.2 |
| MsG0880045263.01.T01 | AT2G33820 | 24.848 | 330 | 199 | 12 | 5 | 313 | 13 | 314 | 2.15e-13 | 70.1 |
| MsG0880045263.01.T01 | AT4G39460 | 23.871 | 310 | 182 | 5 | 4 | 313 | 56 | 311 | 3.00e-13 | 69.7 |
| MsG0880045263.01.T01 | AT4G39460 | 23.871 | 310 | 182 | 5 | 4 | 313 | 56 | 311 | 3.00e-13 | 69.7 |
| MsG0880045263.01.T01 | AT4G39460 | 23.871 | 310 | 182 | 5 | 4 | 313 | 56 | 311 | 3.00e-13 | 69.7 |
| MsG0880045263.01.T01 | AT2G37890 | 22.118 | 321 | 208 | 8 | 4 | 313 | 43 | 332 | 6.93e-13 | 68.9 |
| MsG0880045263.01.T01 | AT3G53940 | 26.425 | 193 | 125 | 4 | 132 | 312 | 73 | 260 | 8.89e-13 | 68.2 |
| MsG0880045263.01.T01 | AT2G35800 | 25.159 | 314 | 184 | 10 | 3 | 314 | 542 | 806 | 1.55e-12 | 68.6 |
| MsG0880045263.01.T01 | AT2G47490 | 27.213 | 305 | 172 | 12 | 22 | 313 | 33 | 300 | 1.68e-12 | 67.4 |
| MsG0880045263.01.T01 | AT5G66380 | 28.718 | 195 | 121 | 8 | 130 | 316 | 12 | 196 | 2.34e-12 | 67.0 |
| MsG0880045263.01.T01 | AT1G07030 | 26.380 | 326 | 183 | 12 | 6 | 316 | 36 | 319 | 2.59e-12 | 67.0 |
| MsG0880045263.01.T01 | AT4G26180 | 24.537 | 216 | 143 | 7 | 109 | 311 | 1 | 209 | 4.19e-12 | 66.2 |
| MsG0880045263.01.T01 | AT3G55640 | 25.000 | 196 | 130 | 5 | 132 | 315 | 38 | 228 | 5.00e-12 | 65.5 |
| MsG0880045263.01.T01 | AT3G55640 | 25.000 | 196 | 130 | 5 | 132 | 315 | 38 | 228 | 5.00e-12 | 65.5 |
| MsG0880045263.01.T01 | AT3G51870 | 28.977 | 176 | 116 | 4 | 141 | 315 | 104 | 271 | 6.70e-12 | 66.2 |
| MsG0880045263.01.T01 | AT3G51870 | 25.000 | 296 | 180 | 11 | 20 | 313 | 105 | 360 | 1.49e-11 | 65.1 |
| MsG0880045263.01.T01 | AT3G55640 | 24.747 | 198 | 136 | 4 | 126 | 315 | 36 | 228 | 6.75e-12 | 65.9 |
| MsG0880045263.01.T01 | AT3G55640 | 24.747 | 198 | 136 | 4 | 126 | 315 | 36 | 228 | 6.75e-12 | 65.9 |
| MsG0880045263.01.T01 | AT4G26180 | 24.537 | 216 | 143 | 7 | 109 | 311 | 1 | 209 | 7.64e-12 | 65.5 |
| MsG0880045263.01.T01 | AT2G33820 | 23.596 | 267 | 146 | 9 | 5 | 243 | 13 | 249 | 1.07e-11 | 64.7 |
| MsG0880045263.01.T01 | AT4G27940 | 24.340 | 341 | 217 | 10 | 12 | 314 | 71 | 408 | 1.18e-11 | 65.5 |
| MsG0880045263.01.T01 | AT5G17400 | 23.793 | 290 | 185 | 7 | 6 | 287 | 14 | 275 | 4.44e-11 | 63.2 |
| MsG0880045263.01.T01 | AT5G01500 | 29.121 | 182 | 110 | 8 | 140 | 315 | 131 | 299 | 4.69e-11 | 63.5 |
| MsG0880045263.01.T01 | AT3G21390 | 23.476 | 328 | 197 | 10 | 9 | 307 | 22 | 324 | 6.34e-11 | 62.8 |
| MsG0880045263.01.T01 | AT5G51050 | 27.513 | 189 | 126 | 5 | 132 | 316 | 223 | 404 | 8.67e-11 | 63.2 |
| MsG0880045263.01.T01 | AT3G21390 | 23.476 | 328 | 197 | 10 | 9 | 307 | 44 | 346 | 9.09e-11 | 62.8 |
Find 126 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCATCCTATGATGAGTTTA+AGG | 0.258648 | 8:+56613957 | MsG0880045263.01.T01:CDS |
| GGGCTGCTCGCCGGTGGGAT+TGG | 0.301666 | 8:+56613736 | MsG0880045263.01.T01:CDS |
| TGGCGCGGCGGTCGGGAATC+CGG | 0.321453 | 8:+56613756 | MsG0880045263.01.T01:CDS |
| CGGCCCAACACGGGGCGGTT+TGG | 0.326403 | 8:-56613530 | None:intergenic |
| GTGGGATTGGCGCGGCGGTC+GGG | 0.359376 | 8:+56613749 | MsG0880045263.01.T01:CDS |
| CGGACTTATAGTTTCTTCTC+TGG | 0.360466 | 8:-56613828 | None:intergenic |
| TGCTAATGCTGGTCGGATAT+TGG | 0.367208 | 8:-56613467 | None:intergenic |
| ACAGGTTCGTAAGTTGCTTA+AGG | 0.385790 | 8:+56614266 | MsG0880045263.01.T01:CDS |
| CGGCCAAACCGCCCCGTGTT+GGG | 0.388767 | 8:+56613527 | MsG0880045263.01.T01:CDS |
| GGTGGGATTGGCGCGGCGGT+CGG | 0.398701 | 8:+56613748 | MsG0880045263.01.T01:CDS |
| CATGGCGCGGTTCACCGTTA+AGG | 0.405182 | 8:-56613914 | None:intergenic |
| GTGCTGCTACACCTTCTTGT+TGG | 0.410225 | 8:-56613576 | None:intergenic |
| GGGTCCTATGGCTCTTTACA+AGG | 0.411226 | 8:+56614182 | MsG0880045263.01.T01:CDS |
| TTGCCGTTGACAAGCAAGAT+TGG | 0.420958 | 8:+56613709 | MsG0880045263.01.T01:CDS |
| ACAAACAACACAACGGTAAA+CGG | 0.423325 | 8:-56614234 | None:intergenic |
| GTTGTTTGTTACATTGGAAC+AGG | 0.435604 | 8:+56614248 | MsG0880045263.01.T01:CDS |
| GGCATAGCTTCCATCATTGC+AGG | 0.435640 | 8:+56613373 | MsG0880045263.01.T01:CDS |
| ACGGCCAAACCGCCCCGTGT+TGG | 0.435675 | 8:+56613526 | MsG0880045263.01.T01:CDS |
| GGTTGGATGAAGGATGGGCT+TGG | 0.436837 | 8:+56613997 | MsG0880045263.01.T01:CDS |
| GGCGGTTTGGCCGTCACCAC+CGG | 0.437029 | 8:-56613517 | None:intergenic |
| GGTCCCTGCCTTGTAATTGT+AGG | 0.442748 | 8:-56614213 | None:intergenic |
| ATTGGAGCGGGGCTGCTCGC+CGG | 0.443449 | 8:+56613727 | MsG0880045263.01.T01:CDS |
| TCCAACCCGGTTCGGTTCAT+CGG | 0.448540 | 8:+56613491 | MsG0880045263.01.T01:CDS |
| CGTTGTGTTGTTTGTTACAT+TGG | 0.449852 | 8:+56614242 | MsG0880045263.01.T01:CDS |
| CTCTATTCCACCACCCGTAT+GGG | 0.452624 | 8:+56613637 | MsG0880045263.01.T01:CDS |
| CGGCGACCGATGAACCGAAC+CGG | 0.453026 | 8:-56613497 | None:intergenic |
| CAATCAATGGCACCGGAGTA+AGG | 0.460053 | 8:-56614135 | None:intergenic |
| GGAGTAAGGCGGAGGCGATC+CGG | 0.461442 | 8:-56614121 | None:intergenic |
| TCATCGGTCGCCGGTGGTGA+CGG | 0.462318 | 8:+56613507 | MsG0880045263.01.T01:CDS |
| GGAGCGGGGCTGCTCGCCGG+TGG | 0.465110 | 8:+56613730 | MsG0880045263.01.T01:CDS |
| GTTGGATGAAGGATGGGCTT+GGG | 0.467370 | 8:+56613998 | MsG0880045263.01.T01:CDS |
| GGCGGCGGTTGCGTCGAATC+CGG | 0.471512 | 8:+56614056 | MsG0880045263.01.T01:CDS |
| TTGACAAGCAAGATTGGAGC+GGG | 0.472465 | 8:+56613715 | MsG0880045263.01.T01:CDS |
| ATTAGCATTCCAACCCGGTT+CGG | 0.477760 | 8:+56613483 | MsG0880045263.01.T01:CDS |
| ATGGCGCGGTTCATCCTTAA+CGG | 0.478626 | 8:+56613900 | MsG0880045263.01.T01:CDS |
| CGGTGGATGTGATTAAGACT+AGG | 0.482921 | 8:+56614076 | MsG0880045263.01.T01:CDS |
| GTGTCTCCGCCACCGTTCTC+CGG | 0.485350 | 8:+56613608 | MsG0880045263.01.T01:CDS |
| TTGAAGACTGTTCGTGCTGA+GGG | 0.486561 | 8:+56614162 | MsG0880045263.01.T01:CDS |
| GACCGCCGCGCCAATCCCAC+CGG | 0.488627 | 8:-56613746 | None:intergenic |
| GGACTTATAGTTTCTTCTCT+GGG | 0.489330 | 8:-56613827 | None:intergenic |
| TATTCCTACAATTACAAGGC+AGG | 0.491525 | 8:+56614209 | MsG0880045263.01.T01:CDS |
| TGTTCGTGCTGAGGGTCCTA+TGG | 0.492843 | 8:+56614170 | MsG0880045263.01.T01:CDS |
| TGTTGAACACCCTGCAATGA+TGG | 0.493211 | 8:-56613383 | None:intergenic |
| AAGGTTCGAATGCAGCTTCA+AGG | 0.496054 | 8:+56613424 | MsG0880045263.01.T01:CDS |
| GTTAGTTACCGCGTCACAGC+TGG | 0.497753 | 8:+56613936 | MsG0880045263.01.T01:CDS |
| CAACAGCGATCGGCCCAACA+CGG | 0.500458 | 8:-56613540 | None:intergenic |
| AACAGCGATCGGCCCAACAC+GGG | 0.504249 | 8:-56613539 | None:intergenic |
| GCTGGTCGGATATTGGTTGT+AGG | 0.505194 | 8:-56613460 | None:intergenic |
| TCTCTATTCCACCACCCGTA+TGG | 0.506394 | 8:+56613636 | MsG0880045263.01.T01:CDS |
| ATGAATATGAAGGTGGAGGC+CGG | 0.509995 | 8:+56614102 | MsG0880045263.01.T01:CDS |
| AACGGCAAAGTACCGGAGAT+AGG | 0.516962 | 8:-56613694 | None:intergenic |
| CCGTCGTCGACGCCATCACT+AGG | 0.517193 | 8:+56613848 | MsG0880045263.01.T01:CDS |
| CGGCTGATGTGGCAATGGTT+AGG | 0.521248 | 8:+56613776 | MsG0880045263.01.T01:CDS |
| AGTCTTCAAAGCACAATCAA+TGG | 0.523057 | 8:-56614148 | None:intergenic |
| ATAGAGTCCCATACGGGTGG+TGG | 0.523945 | 8:-56613644 | None:intergenic |
| GAGCGGGGCTGCTCGCCGGT+GGG | 0.525418 | 8:+56613731 | MsG0880045263.01.T01:CDS |
| GGTCGGGAATCCGGCTGATG+TGG | 0.525455 | 8:+56613765 | MsG0880045263.01.T01:CDS |
| AATAATCGCAATGGGTGTGA+AGG | 0.526131 | 8:+56613336 | None:intergenic |
| CTAACCATTGCCACATCAGC+CGG | 0.528201 | 8:-56613775 | None:intergenic |
| ACCGATGAACCGAACCGGGT+TGG | 0.533148 | 8:-56613492 | None:intergenic |
| GTCTTTCGCCATCCTAGTGA+TGG | 0.535829 | 8:-56613860 | None:intergenic |
| AAATGGTCTGATCCTATCTC+CGG | 0.538460 | 8:+56613682 | MsG0880045263.01.T01:CDS |
| CGTGTTGGGCCGATCGCTGT+TGG | 0.539682 | 8:+56613541 | MsG0880045263.01.T01:CDS |
| GCTTGTCAACGGCAAAGTAC+CGG | 0.541832 | 8:-56613701 | None:intergenic |
| TTTGAAGACTGTTCGTGCTG+AGG | 0.545035 | 8:+56614161 | MsG0880045263.01.T01:CDS |
| AGCTTAACACCAACAGCGAT+CGG | 0.547313 | 8:-56613550 | None:intergenic |
| GGCGACCGATGAACCGAACC+GGG | 0.549411 | 8:-56613496 | None:intergenic |
| ACGAGGGAGTTACTAGCCTA+TGG | 0.549664 | 8:+56613881 | MsG0880045263.01.T01:CDS |
| AAACCCTTGTAAAGAGCCAT+AGG | 0.551305 | 8:-56614186 | None:intergenic |
| CGGTTCGGTTCATCGGTCGC+CGG | 0.554937 | 8:+56613498 | MsG0880045263.01.T01:CDS |
| GAGAACGGTGGCGGAGACAC+CGG | 0.556496 | 8:-56613605 | None:intergenic |
| GCTCGCCGGTGGGATTGGCG+CGG | 0.558280 | 8:+56613741 | MsG0880045263.01.T01:CDS |
| ACACTGCCGGAGAACGGTGG+CGG | 0.561241 | 8:-56613614 | None:intergenic |
| TAGTTTCTTCTCTGGGCCGA+CGG | 0.562742 | 8:-56613820 | None:intergenic |
| TGTGGCAATGGTTAGGATGC+AGG | 0.565735 | 8:+56613783 | MsG0880045263.01.T01:CDS |
| CTGTGACGCGGTAACTAACA+TGG | 0.566445 | 8:-56613932 | None:intergenic |
| CGCCGGTGGGATTGGCGCGG+CGG | 0.566467 | 8:+56613744 | MsG0880045263.01.T01:CDS |
| GGATCGCCTCCGCCTTACTC+CGG | 0.567757 | 8:+56614123 | MsG0880045263.01.T01:CDS |
| ATAATCGCAATGGGTGTGAA+GGG | 0.570571 | 8:+56613337 | None:intergenic |
| CCGGGTTGGAATGCTAATGC+TGG | 0.573037 | 8:-56613478 | None:intergenic |
| GGTGTGAAGGGTTTCGTCGA+AGG | 0.574034 | 8:+56613349 | MsG0880045263.01.T01:CDS |
| ATGGCACCGGAGTAAGGCGG+AGG | 0.575695 | 8:-56614129 | None:intergenic |
| TTCGGTTCATCGGTCGCCGG+TGG | 0.575971 | 8:+56613501 | MsG0880045263.01.T01:CDS |
| CACTAGGATGGCGAAAGACG+AGG | 0.577038 | 8:+56613864 | MsG0880045263.01.T01:CDS |
| ATTCCTACAATTACAAGGCA+GGG | 0.578803 | 8:+56614210 | MsG0880045263.01.T01:CDS |
| GGTGGATGTGATTAAGACTA+GGG | 0.581075 | 8:+56614077 | MsG0880045263.01.T01:CDS |
| GGTCCTATGGCTCTTTACAA+GGG | 0.581509 | 8:+56614183 | MsG0880045263.01.T01:CDS |
| TCATATCATAGAGTCCCATA+CGG | 0.584545 | 8:-56613651 | None:intergenic |
| AACCGCCGCCACAAAACCCG+CGG | 0.588953 | 8:-56614043 | None:intergenic |
| GGTGATGAATATGAAGGTGG+AGG | 0.589447 | 8:+56614098 | MsG0880045263.01.T01:CDS |
| TTAAGGATGAACCGCGCCAT+AGG | 0.589706 | 8:-56613897 | None:intergenic |
| CAAAGCACAATCAATGGCAC+CGG | 0.593300 | 8:-56614142 | None:intergenic |
| CATATCATAGAGTCCCATAC+GGG | 0.597212 | 8:-56613650 | None:intergenic |
| GACTAGGGTGATGAATATGA+AGG | 0.600049 | 8:+56614092 | MsG0880045263.01.T01:CDS |
| CTAGTCTTAATCACATCCAC+CGG | 0.603477 | 8:-56614075 | None:intergenic |
| GAATCCGGCTGATGTGGCAA+TGG | 0.605065 | 8:+56613771 | MsG0880045263.01.T01:CDS |
| ACACCCTCTTGATCTCATCA+AGG | 0.606884 | 8:+56613405 | MsG0880045263.01.T01:CDS |
| GTGAAGGGTTTCGTCGAAGG+AGG | 0.607310 | 8:+56613352 | MsG0880045263.01.T01:CDS |
| CGAACCTTGATGAGATCAAG+AGG | 0.611493 | 8:-56613409 | None:intergenic |
| ACAGCGATCGGCCCAACACG+GGG | 0.612038 | 8:-56613538 | None:intergenic |
| GGCGGTTGCGTCGAATCCGG+TGG | 0.613152 | 8:+56614059 | MsG0880045263.01.T01:CDS |
| GTTAAGCTAGTCCAACAAGA+AGG | 0.614148 | 8:+56613565 | MsG0880045263.01.T01:CDS |
| ATAGAGACACTGCCGGAGAA+CGG | 0.615334 | 8:-56613620 | None:intergenic |
| ATGGTTAGGATGCAGGCAGA+CGG | 0.617509 | 8:+56613790 | MsG0880045263.01.T01:CDS |
| CGTCGACGCCATCACTAGGA+TGG | 0.618345 | 8:+56613852 | MsG0880045263.01.T01:CDS |
| AAAATGGTTGGATGAAGGAT+GGG | 0.619691 | 8:+56613992 | MsG0880045263.01.T01:CDS |
| TAGGGTGATGAATATGAAGG+TGG | 0.625045 | 8:+56614095 | MsG0880045263.01.T01:CDS |
| GCTCCAATCTTGCTTGTCAA+CGG | 0.630329 | 8:-56613712 | None:intergenic |
| CCAGCATTAGCATTCCAACC+CGG | 0.630776 | 8:+56613478 | MsG0880045263.01.T01:CDS |
| CCTAGTGATGGCGTCGACGA+CGG | 0.632394 | 8:-56613848 | None:intergenic |
| TGGTGGAATAGAGACACTGC+CGG | 0.636597 | 8:-56613627 | None:intergenic |
| ACTAGGATGGCGAAAGACGA+GGG | 0.644204 | 8:+56613865 | MsG0880045263.01.T01:CDS |
| GGCAGACGGAAGACTTCCGT+CGG | 0.646351 | 8:+56613804 | MsG0880045263.01.T01:CDS |
| GCATAGCTTCCATCATTGCA+GGG | 0.651032 | 8:+56613374 | MsG0880045263.01.T01:CDS |
| GTTGGAATGCTAATGCTGGT+CGG | 0.653431 | 8:-56613474 | None:intergenic |
| ATCATAGAGTCCCATACGGG+TGG | 0.658486 | 8:-56613647 | None:intergenic |
| GTTGACAAGCAAGATTGGAG+CGG | 0.666908 | 8:+56613714 | MsG0880045263.01.T01:CDS |
| ACGCGGTAACTAACATGGCG+CGG | 0.672856 | 8:-56613927 | None:intergenic |
| GCGATCGGCCCAACACGGGG+CGG | 0.686402 | 8:-56613535 | None:intergenic |
| GAGACACTGCCGGAGAACGG+TGG | 0.687440 | 8:-56613617 | None:intergenic |
| ATAGGATGCCAGCTGTGACG+CGG | 0.695379 | 8:-56613944 | None:intergenic |
| CAATGTAACAAACAACACAA+CGG | 0.699064 | 8:-56614241 | None:intergenic |
| GAACCTTGATGAGATCAAGA+GGG | 0.713345 | 8:-56613408 | None:intergenic |
| TGACAAGCAAGATTGGAGCG+GGG | 0.724268 | 8:+56613716 | MsG0880045263.01.T01:CDS |
| TCAATGGCACCGGAGTAAGG+CGG | 0.732141 | 8:-56614132 | None:intergenic |
| GGAGTTACTAGCCTATGGCG+CGG | 0.742480 | 8:+56613886 | MsG0880045263.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGATATGATGAAGAAAAAA+TGG | + | Chr8:56613665-56613684 | MsG0880045263.01.T01:CDS | 20.0% |
| !!! | AAAAGATTTTGAAAAATGGT+TGG | + | Chr8:56613980-56613999 | MsG0880045263.01.T01:CDS | 20.0% |
| !!! | AAGGAAAAGATTTTGAAAAA+TGG | + | Chr8:56613976-56613995 | MsG0880045263.01.T01:CDS | 20.0% |
| !!! | GTTTTATTCCTACAATTACA+AGG | + | Chr8:56614205-56614224 | MsG0880045263.01.T01:CDS | 25.0% |
| CAATGTAACAAACAACACAA+CGG | - | Chr8:56614244-56614263 | None:intergenic | 30.0% | |
| TTTGAAAAATGGTTGGATGA+AGG | + | Chr8:56613987-56614006 | MsG0880045263.01.T01:CDS | 30.0% | |
| ! | CTTTTCCTTAAACTCATCAT+AGG | - | Chr8:56613965-56613984 | None:intergenic | 30.0% |
| AAAAATGGTTGGATGAAGGA+TGG | + | Chr8:56613991-56614010 | MsG0880045263.01.T01:CDS | 35.0% | |
| AAAATGGTTGGATGAAGGAT+GGG | + | Chr8:56613992-56614011 | MsG0880045263.01.T01:CDS | 35.0% | |
| ACAAACAACACAACGGTAAA+CGG | - | Chr8:56614237-56614256 | None:intergenic | 35.0% | |
| AGTCTTCAAAGCACAATCAA+TGG | - | Chr8:56614151-56614170 | None:intergenic | 35.0% | |
| ATTCCTACAATTACAAGGCA+GGG | + | Chr8:56614210-56614229 | MsG0880045263.01.T01:CDS | 35.0% | |
| GGACTTATAGTTTCTTCTCT+GGG | - | Chr8:56613830-56613849 | None:intergenic | 35.0% | |
| TATTCCTACAATTACAAGGC+AGG | + | Chr8:56614209-56614228 | MsG0880045263.01.T01:CDS | 35.0% | |
| TCATATCATAGAGTCCCATA+CGG | - | Chr8:56613654-56613673 | None:intergenic | 35.0% | |
| ! | GTTGTTTGTTACATTGGAAC+AGG | + | Chr8:56614248-56614267 | MsG0880045263.01.T01:CDS | 35.0% |
| !! | CGTTGTGTTGTTTGTTACAT+TGG | + | Chr8:56614242-56614261 | MsG0880045263.01.T01:CDS | 35.0% |
| AAACCCTTGTAAAGAGCCAT+AGG | - | Chr8:56614189-56614208 | None:intergenic | 40.0% | |
| AAATGGTCTGATCCTATCTC+CGG | + | Chr8:56613682-56613701 | MsG0880045263.01.T01:CDS | 40.0% | |
| ACAGGTTCGTAAGTTGCTTA+AGG | + | Chr8:56614266-56614285 | MsG0880045263.01.T01:CDS | 40.0% | |
| CATATCATAGAGTCCCATAC+GGG | - | Chr8:56613653-56613672 | None:intergenic | 40.0% | |
| CGGACTTATAGTTTCTTCTC+TGG | - | Chr8:56613831-56613850 | None:intergenic | 40.0% | |
| GAACCTTGATGAGATCAAGA+GGG | - | Chr8:56613411-56613430 | None:intergenic | 40.0% | |
| GACTAGGGTGATGAATATGA+AGG | + | Chr8:56614092-56614111 | MsG0880045263.01.T01:CDS | 40.0% | |
| GGAAAAACTAGCTGTCACAT+GGG | - | Chr8:56614025-56614044 | None:intergenic | 40.0% | |
| GGCATCCTATGATGAGTTTA+AGG | + | Chr8:56613957-56613976 | MsG0880045263.01.T01:CDS | 40.0% | |
| GGTGGATGTGATTAAGACTA+GGG | + | Chr8:56614077-56614096 | MsG0880045263.01.T01:CDS | 40.0% | |
| GTTAAGCTAGTCCAACAAGA+AGG | + | Chr8:56613565-56613584 | MsG0880045263.01.T01:CDS | 40.0% | |
| TAGGGTGATGAATATGAAGG+TGG | + | Chr8:56614095-56614114 | MsG0880045263.01.T01:CDS | 40.0% | |
| !! | CTAGTCTTAATCACATCCAC+CGG | - | Chr8:56614078-56614097 | None:intergenic | 40.0% |
| AAGGTTCGAATGCAGCTTCA+AGG | + | Chr8:56613424-56613443 | MsG0880045263.01.T01:CDS | 45.0% | |
| ACACCCTCTTGATCTCATCA+AGG | + | Chr8:56613405-56613424 | MsG0880045263.01.T01:CDS | 45.0% | |
| AGCTTAACACCAACAGCGAT+CGG | - | Chr8:56613553-56613572 | None:intergenic | 45.0% | |
| ATGAATATGAAGGTGGAGGC+CGG | + | Chr8:56614102-56614121 | MsG0880045263.01.T01:CDS | 45.0% | |
| ATTAGCATTCCAACCCGGTT+CGG | + | Chr8:56613483-56613502 | MsG0880045263.01.T01:CDS | 45.0% | |
| CAAAGCACAATCAATGGCAC+CGG | - | Chr8:56614145-56614164 | None:intergenic | 45.0% | |
| CGAACCTTGATGAGATCAAG+AGG | - | Chr8:56613412-56613431 | None:intergenic | 45.0% | |
| CGGAAAAACTAGCTGTCACA+TGG | - | Chr8:56614026-56614045 | None:intergenic | 45.0% | |
| CGGTGGATGTGATTAAGACT+AGG | + | Chr8:56614076-56614095 | MsG0880045263.01.T01:CDS | 45.0% | |
| GCATAGCTTCCATCATTGCA+GGG | + | Chr8:56613374-56613393 | MsG0880045263.01.T01:CDS | 45.0% | |
| GCTCCAATCTTGCTTGTCAA+CGG | - | Chr8:56613715-56613734 | None:intergenic | 45.0% | |
| GGTCCTATGGCTCTTTACAA+GGG | + | Chr8:56614183-56614202 | MsG0880045263.01.T01:CDS | 45.0% | |
| GGTGATGAATATGAAGGTGG+AGG | + | Chr8:56614098-56614117 | MsG0880045263.01.T01:CDS | 45.0% | |
| GTTGACAAGCAAGATTGGAG+CGG | + | Chr8:56613714-56613733 | MsG0880045263.01.T01:CDS | 45.0% | |
| GTTGGAATGCTAATGCTGGT+CGG | - | Chr8:56613477-56613496 | None:intergenic | 45.0% | |
| TGCTAATGCTGGTCGGATAT+TGG | - | Chr8:56613470-56613489 | None:intergenic | 45.0% | |
| TGTTGAACACCCTGCAATGA+TGG | - | Chr8:56613386-56613405 | None:intergenic | 45.0% | |
| TTGAAGACTGTTCGTGCTGA+GGG | + | Chr8:56614162-56614181 | MsG0880045263.01.T01:CDS | 45.0% | |
| TTGACAAGCAAGATTGGAGC+GGG | + | Chr8:56613715-56613734 | MsG0880045263.01.T01:CDS | 45.0% | |
| TTGCCGTTGACAAGCAAGAT+TGG | + | Chr8:56613709-56613728 | MsG0880045263.01.T01:CDS | 45.0% | |
| TTTGAAGACTGTTCGTGCTG+AGG | + | Chr8:56614161-56614180 | MsG0880045263.01.T01:CDS | 45.0% | |
| ! | TAGTTTTTCCGCGGGTTTTG+TGG | + | Chr8:56614035-56614054 | MsG0880045263.01.T01:CDS | 45.0% |
| !!! | GGTGTAGCAGCACTTTTTTC+CGG | + | Chr8:56613586-56613605 | MsG0880045263.01.T01:CDS | 45.0% |
| !!! | TGTGACAGCTAGTTTTTCCG+CGG | + | Chr8:56614026-56614045 | MsG0880045263.01.T01:CDS | 45.0% |
| ACTAGGATGGCGAAAGACGA+GGG | + | Chr8:56613865-56613884 | MsG0880045263.01.T01:CDS | 50.0% | |
| ATAGAGACACTGCCGGAGAA+CGG | - | Chr8:56613623-56613642 | None:intergenic | 50.0% | |
| ATCATAGAGTCCCATACGGG+TGG | - | Chr8:56613650-56613669 | None:intergenic | 50.0% | |
| ATGGCGCGGTTCATCCTTAA+CGG | + | Chr8:56613900-56613919 | MsG0880045263.01.T01:CDS | 50.0% | |
| ATGGTTAGGATGCAGGCAGA+CGG | + | Chr8:56613790-56613809 | MsG0880045263.01.T01:CDS | 50.0% | |
| CCAGCATTAGCATTCCAACC+CGG | + | Chr8:56613478-56613497 | MsG0880045263.01.T01:CDS | 50.0% | |
| CTAACCATTGCCACATCAGC+CGG | - | Chr8:56613778-56613797 | None:intergenic | 50.0% | |
| CTCTATTCCACCACCCGTAT+GGG | + | Chr8:56613637-56613656 | MsG0880045263.01.T01:CDS | 50.0% | |
| CTGTGACGCGGTAACTAACA+TGG | - | Chr8:56613935-56613954 | None:intergenic | 50.0% | |
| GCTTGTCAACGGCAAAGTAC+CGG | - | Chr8:56613704-56613723 | None:intergenic | 50.0% | |
| GGCATAGCTTCCATCATTGC+AGG | + | Chr8:56613373-56613392 | MsG0880045263.01.T01:CDS | 50.0% | |
| GGGTCCTATGGCTCTTTACA+AGG | + | Chr8:56614182-56614201 | MsG0880045263.01.T01:CDS | 50.0% | |
| GGTCCCTGCCTTGTAATTGT+AGG | - | Chr8:56614216-56614235 | None:intergenic | 50.0% | |
| GTCTTTCGCCATCCTAGTGA+TGG | - | Chr8:56613863-56613882 | None:intergenic | 50.0% | |
| TAGTTTCTTCTCTGGGCCGA+CGG | - | Chr8:56613823-56613842 | None:intergenic | 50.0% | |
| TCTCTATTCCACCACCCGTA+TGG | + | Chr8:56613636-56613655 | MsG0880045263.01.T01:CDS | 50.0% | |
| TGACAAGCAAGATTGGAGCG+GGG | + | Chr8:56613716-56613735 | MsG0880045263.01.T01:CDS | 50.0% | |
| TGGTGGAATAGAGACACTGC+CGG | - | Chr8:56613630-56613649 | None:intergenic | 50.0% | |
| TGTGGCAATGGTTAGGATGC+AGG | + | Chr8:56613783-56613802 | MsG0880045263.01.T01:CDS | 50.0% | |
| TTAAGGATGAACCGCGCCAT+AGG | - | Chr8:56613900-56613919 | None:intergenic | 50.0% | |
| ! | ACGAGGGAGTTACTAGCCTA+TGG | + | Chr8:56613881-56613900 | MsG0880045263.01.T01:CDS | 50.0% |
| ! | CAATCAATGGCACCGGAGTA+AGG | - | Chr8:56614138-56614157 | None:intergenic | 50.0% |
| ! | GCTGGTCGGATATTGGTTGT+AGG | - | Chr8:56613463-56613482 | None:intergenic | 50.0% |
| ! | GTGCTGCTACACCTTCTTGT+TGG | - | Chr8:56613579-56613598 | None:intergenic | 50.0% |
| ! | GTTGGATGAAGGATGGGCTT+GGG | + | Chr8:56613998-56614017 | MsG0880045263.01.T01:CDS | 50.0% |
| !! | AACGGCAAAGTACCGGAGAT+AGG | - | Chr8:56613697-56613716 | None:intergenic | 50.0% |
| !! | TTTTTCCGCGGGTTTTGTGG+CGG | + | Chr8:56614038-56614057 | MsG0880045263.01.T01:CDS | 50.0% |
| !!! | GTGACAGCTAGTTTTTCCGC+GGG | + | Chr8:56614027-56614046 | MsG0880045263.01.T01:CDS | 50.0% |
| ACGCGGTAACTAACATGGCG+CGG | - | Chr8:56613930-56613949 | None:intergenic | 55.0% | |
| ATAGAGTCCCATACGGGTGG+TGG | - | Chr8:56613647-56613666 | None:intergenic | 55.0% | |
| ATAGGATGCCAGCTGTGACG+CGG | - | Chr8:56613947-56613966 | None:intergenic | 55.0% | |
| CACTAGGATGGCGAAAGACG+AGG | + | Chr8:56613864-56613883 | MsG0880045263.01.T01:CDS | 55.0% | |
| CGGCTGATGTGGCAATGGTT+AGG | + | Chr8:56613776-56613795 | MsG0880045263.01.T01:CDS | 55.0% | |
| GAATCCGGCTGATGTGGCAA+TGG | + | Chr8:56613771-56613790 | MsG0880045263.01.T01:CDS | 55.0% | |
| GGTGTGAAGGGTTTCGTCGA+AGG | + | Chr8:56613349-56613368 | MsG0880045263.01.T01:CDS | 55.0% | |
| GTGAAGGGTTTCGTCGAAGG+AGG | + | Chr8:56613352-56613371 | MsG0880045263.01.T01:CDS | 55.0% | |
| GTTAGTTACCGCGTCACAGC+TGG | + | Chr8:56613936-56613955 | MsG0880045263.01.T01:CDS | 55.0% | |
| TGTTCGTGCTGAGGGTCCTA+TGG | + | Chr8:56614170-56614189 | MsG0880045263.01.T01:CDS | 55.0% | |
| ! | CCGGGTTGGAATGCTAATGC+TGG | - | Chr8:56613481-56613500 | None:intergenic | 55.0% |
| ! | GGAGTTACTAGCCTATGGCG+CGG | + | Chr8:56613886-56613905 | MsG0880045263.01.T01:CDS | 55.0% |
| ! | GGTTGGATGAAGGATGGGCT+TGG | + | Chr8:56613997-56614016 | MsG0880045263.01.T01:CDS | 55.0% |
| ! | TCAATGGCACCGGAGTAAGG+CGG | - | Chr8:56614135-56614154 | None:intergenic | 55.0% |
| !! | TCCAACCCGGTTCGGTTCAT+CGG | + | Chr8:56613491-56613510 | MsG0880045263.01.T01:CDS | 55.0% |
| AACAGCGATCGGCCCAACAC+GGG | - | Chr8:56613542-56613561 | None:intergenic | 60.0% | |
| ACCGATGAACCGAACCGGGT+TGG | - | Chr8:56613495-56613514 | None:intergenic | 60.0% | |
| CAACAGCGATCGGCCCAACA+CGG | - | Chr8:56613543-56613562 | None:intergenic | 60.0% | |
| CATGGCGCGGTTCACCGTTA+AGG | - | Chr8:56613917-56613936 | None:intergenic | 60.0% | |
| CGTCGACGCCATCACTAGGA+TGG | + | Chr8:56613852-56613871 | MsG0880045263.01.T01:CDS | 60.0% | |
| GGCAGACGGAAGACTTCCGT+CGG | + | Chr8:56613804-56613823 | MsG0880045263.01.T01:CDS | 60.0% | |
| !! | CCTAGTGATGGCGTCGACGA+CGG | - | Chr8:56613851-56613870 | None:intergenic | 60.0% |
| AACCGCCGCCACAAAACCCG+CGG | - | Chr8:56614046-56614065 | None:intergenic | 65.0% | |
| ACACTGCCGGAGAACGGTGG+CGG | - | Chr8:56613617-56613636 | None:intergenic | 65.0% | |
| ACAGCGATCGGCCCAACACG+GGG | - | Chr8:56613541-56613560 | None:intergenic | 65.0% | |
| CCGTCGTCGACGCCATCACT+AGG | + | Chr8:56613848-56613867 | MsG0880045263.01.T01:CDS | 65.0% | |
| CGGCGACCGATGAACCGAAC+CGG | - | Chr8:56613500-56613519 | None:intergenic | 65.0% | |
| CGTGTTGGGCCGATCGCTGT+TGG | + | Chr8:56613541-56613560 | MsG0880045263.01.T01:CDS | 65.0% | |
| GAGACACTGCCGGAGAACGG+TGG | - | Chr8:56613620-56613639 | None:intergenic | 65.0% | |
| GGAGTAAGGCGGAGGCGATC+CGG | - | Chr8:56614124-56614143 | None:intergenic | 65.0% | |
| GGATCGCCTCCGCCTTACTC+CGG | + | Chr8:56614123-56614142 | MsG0880045263.01.T01:CDS | 65.0% | |
| GGCGACCGATGAACCGAACC+GGG | - | Chr8:56613499-56613518 | None:intergenic | 65.0% | |
| GGTCGGGAATCCGGCTGATG+TGG | + | Chr8:56613765-56613784 | MsG0880045263.01.T01:CDS | 65.0% | |
| GTGTCTCCGCCACCGTTCTC+CGG | + | Chr8:56613608-56613627 | MsG0880045263.01.T01:CDS | 65.0% | |
| TCATCGGTCGCCGGTGGTGA+CGG | + | Chr8:56613507-56613526 | MsG0880045263.01.T01:CDS | 65.0% | |
| TTCGGTTCATCGGTCGCCGG+TGG | + | Chr8:56613501-56613520 | MsG0880045263.01.T01:CDS | 65.0% | |
| ! | ATGGCACCGGAGTAAGGCGG+AGG | - | Chr8:56614132-56614151 | None:intergenic | 65.0% |
| !! | CGGTTCGGTTCATCGGTCGC+CGG | + | Chr8:56613498-56613517 | MsG0880045263.01.T01:CDS | 65.0% |
| !! | GAGAACGGTGGCGGAGACAC+CGG | - | Chr8:56613608-56613627 | None:intergenic | 65.0% |
| !! | TTCCGCGGGTTTTGTGGCGG+CGG | + | Chr8:56614041-56614060 | MsG0880045263.01.T01:CDS | 65.0% |
| ACGGCCAAACCGCCCCGTGT+TGG | + | Chr8:56613526-56613545 | MsG0880045263.01.T01:CDS | 70.0% | |
| ATTGGAGCGGGGCTGCTCGC+CGG | + | Chr8:56613727-56613746 | MsG0880045263.01.T01:CDS | 70.0% | |
| CGGCCAAACCGCCCCGTGTT+GGG | + | Chr8:56613527-56613546 | MsG0880045263.01.T01:CDS | 70.0% | |
| GGCGGCGGTTGCGTCGAATC+CGG | + | Chr8:56614056-56614075 | MsG0880045263.01.T01:CDS | 70.0% | |
| GGCGGTTGCGTCGAATCCGG+TGG | + | Chr8:56614059-56614078 | MsG0880045263.01.T01:CDS | 70.0% | |
| ! | GGCGGTTTGGCCGTCACCAC+CGG | - | Chr8:56613520-56613539 | None:intergenic | 70.0% |
| CGGCCCAACACGGGGCGGTT+TGG | - | Chr8:56613533-56613552 | None:intergenic | 75.0% | |
| GACCGCCGCGCCAATCCCAC+CGG | - | Chr8:56613749-56613768 | None:intergenic | 75.0% | |
| GCGATCGGCCCAACACGGGG+CGG | - | Chr8:56613538-56613557 | None:intergenic | 75.0% | |
| GGGCTGCTCGCCGGTGGGAT+TGG | + | Chr8:56613736-56613755 | MsG0880045263.01.T01:CDS | 75.0% | |
| TGGCGCGGCGGTCGGGAATC+CGG | + | Chr8:56613756-56613775 | MsG0880045263.01.T01:CDS | 75.0% | |
| ! | GCTCGCCGGTGGGATTGGCG+CGG | + | Chr8:56613741-56613760 | MsG0880045263.01.T01:CDS | 75.0% |
| ! | GGTGGGATTGGCGCGGCGGT+CGG | + | Chr8:56613748-56613767 | MsG0880045263.01.T01:CDS | 75.0% |
| ! | GTGGGATTGGCGCGGCGGTC+GGG | + | Chr8:56613749-56613768 | MsG0880045263.01.T01:CDS | 75.0% |
| ! | GAGCGGGGCTGCTCGCCGGT+GGG | + | Chr8:56613731-56613750 | MsG0880045263.01.T01:CDS | 80.0% |
| !! | CGCCGGTGGGATTGGCGCGG+CGG | + | Chr8:56613744-56613763 | MsG0880045263.01.T01:CDS | 80.0% |
| ! | GGAGCGGGGCTGCTCGCCGG+TGG | + | Chr8:56613730-56613749 | MsG0880045263.01.T01:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 56613346 | 56614296 | 56613346 | ID=MsG0880045263.01;Name=MsG0880045263.01 |
| Chr8 | mRNA | 56613346 | 56614296 | 56613346 | ID=MsG0880045263.01.T01;Parent=MsG0880045263.01;Name=MsG0880045263.01.T01;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|316 |
| Chr8 | exon | 56613346 | 56614296 | 56613346 | ID=MsG0880045263.01.T01:exon:1030;Parent=MsG0880045263.01.T01 |
| Chr8 | CDS | 56613346 | 56614296 | 56613346 | ID=MsG0880045263.01.T01:cds;Parent=MsG0880045263.01.T01 |
| Gene Sequence |
| Protein sequence |
