Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004953.01.T01 | XP_003591661.1 | 90.852 | 317 | 14 | 2 | 1 | 317 | 1 | 302 | 0 | 584 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004953.01.T01 | Q9XI74 | 68.71 | 310 | 76 | 5 | 13 | 317 | 12 | 305 | 5.71E-151 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004953.01.T01 | G7ZYE6 | 90.852 | 317 | 14 | 2 | 1 | 317 | 1 | 302 | 0.0 | 584 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480018798.01 | MsG0180004953.01 | PPI |
| MsG0180004953.01 | MsG0880045263.01 | PPI |
| MsG0480023074.01 | MsG0180004953.01 | PPI |
| MsG0180004910.01 | MsG0180004953.01 | PPI |
| MsG0180004953.01 | MsG0480022104.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004953.01.T01 | MTR_1g090330 | 90.852 | 317 | 14 | 2 | 1 | 317 | 1 | 302 | 0.0 | 584 |
| MsG0180004953.01.T01 | MTR_4g018750 | 36.242 | 298 | 167 | 6 | 20 | 312 | 18 | 297 | 2.59e-55 | 182 |
| MsG0180004953.01.T01 | MTR_4g018750 | 25.000 | 212 | 137 | 3 | 3 | 212 | 105 | 296 | 3.02e-11 | 63.5 |
| MsG0180004953.01.T01 | MTR_7g066690 | 34.228 | 298 | 171 | 5 | 20 | 311 | 20 | 298 | 2.12e-54 | 180 |
| MsG0180004953.01.T01 | MTR_7g066690 | 26.923 | 208 | 129 | 5 | 11 | 215 | 114 | 301 | 5.80e-12 | 65.9 |
| MsG0180004953.01.T01 | MTR_3g462140 | 33.779 | 299 | 174 | 5 | 18 | 310 | 16 | 296 | 1.09e-51 | 172 |
| MsG0180004953.01.T01 | MTR_3g100570 | 32.907 | 313 | 173 | 6 | 22 | 311 | 11 | 309 | 2.66e-49 | 167 |
| MsG0180004953.01.T01 | MTR_5g032420 | 30.841 | 321 | 178 | 4 | 22 | 311 | 11 | 318 | 1.08e-46 | 160 |
| MsG0180004953.01.T01 | MTR_8g068890 | 31.230 | 317 | 175 | 6 | 22 | 311 | 11 | 311 | 1.61e-46 | 159 |
| MsG0180004953.01.T01 | MTR_1g088995 | 30.769 | 299 | 184 | 5 | 20 | 317 | 36 | 312 | 1.75e-44 | 154 |
| MsG0180004953.01.T01 | MTR_4g018750 | 35.878 | 262 | 145 | 6 | 20 | 276 | 18 | 261 | 5.77e-43 | 149 |
| MsG0180004953.01.T01 | MTR_4g018750 | 28.090 | 178 | 124 | 3 | 137 | 310 | 26 | 203 | 6.59e-16 | 77.0 |
| MsG0180004953.01.T01 | MTR_8g086070 | 31.973 | 294 | 170 | 6 | 23 | 311 | 27 | 295 | 1.01e-36 | 134 |
| MsG0180004953.01.T01 | MTR_4g057850 | 28.328 | 293 | 188 | 6 | 14 | 302 | 19 | 293 | 8.61e-26 | 105 |
| MsG0180004953.01.T01 | MTR_4g057850 | 28.866 | 194 | 116 | 6 | 119 | 308 | 23 | 198 | 2.66e-12 | 67.0 |
| MsG0180004953.01.T01 | MTR_5g055410 | 27.817 | 284 | 184 | 8 | 33 | 311 | 37 | 304 | 4.59e-24 | 100 |
| MsG0180004953.01.T01 | MTR_8g086070 | 33.333 | 195 | 101 | 5 | 23 | 212 | 27 | 197 | 8.48e-24 | 97.1 |
| MsG0180004953.01.T01 | MTR_8g066975 | 26.736 | 288 | 190 | 6 | 33 | 313 | 24 | 297 | 3.25e-23 | 97.4 |
| MsG0180004953.01.T01 | MTR_8g066975 | 27.143 | 210 | 134 | 5 | 111 | 313 | 4 | 201 | 5.70e-15 | 74.3 |
| MsG0180004953.01.T01 | MTR_1g087840 | 27.797 | 295 | 170 | 10 | 33 | 311 | 35 | 302 | 4.02e-22 | 94.7 |
| MsG0180004953.01.T01 | MTR_1g088995 | 28.571 | 210 | 128 | 4 | 20 | 228 | 36 | 224 | 9.72e-22 | 92.4 |
| MsG0180004953.01.T01 | MTR_1g088995 | 30.128 | 156 | 97 | 4 | 135 | 289 | 42 | 186 | 1.91e-11 | 63.5 |
| MsG0180004953.01.T01 | MTR_5g030530 | 25.694 | 288 | 193 | 6 | 33 | 313 | 24 | 297 | 5.69e-21 | 91.3 |
| MsG0180004953.01.T01 | MTR_5g030530 | 26.519 | 181 | 124 | 5 | 138 | 311 | 20 | 198 | 5.73e-11 | 62.8 |
| MsG0180004953.01.T01 | MTR_5g030530 | 25.926 | 216 | 132 | 7 | 5 | 210 | 96 | 293 | 9.84e-11 | 62.0 |
| MsG0180004953.01.T01 | MTR_7g109135 | 26.102 | 295 | 195 | 9 | 23 | 311 | 28 | 305 | 1.14e-20 | 90.9 |
| MsG0180004953.01.T01 | MTR_4g012850 | 29.255 | 188 | 113 | 3 | 33 | 217 | 126 | 296 | 7.20e-19 | 85.5 |
| MsG0180004953.01.T01 | MTR_4g012850 | 24.164 | 269 | 171 | 7 | 32 | 293 | 31 | 273 | 2.21e-15 | 75.9 |
| MsG0180004953.01.T01 | MTR_1g097890 | 28.378 | 296 | 156 | 9 | 22 | 310 | 56 | 302 | 1.45e-17 | 82.0 |
| MsG0180004953.01.T01 | MTR_2g436930 | 24.375 | 320 | 188 | 9 | 21 | 306 | 19 | 318 | 4.59e-17 | 80.9 |
| MsG0180004953.01.T01 | MTR_7g109135 | 23.906 | 297 | 192 | 8 | 23 | 311 | 28 | 298 | 7.39e-17 | 80.1 |
| MsG0180004953.01.T01 | MTR_7g084400 | 28.333 | 180 | 103 | 4 | 16 | 192 | 308 | 464 | 1.05e-16 | 80.9 |
| MsG0180004953.01.T01 | MTR_7g084400 | 25.333 | 300 | 179 | 8 | 22 | 310 | 218 | 483 | 4.81e-16 | 79.0 |
| MsG0180004953.01.T01 | MTR_4g119770 | 24.528 | 318 | 192 | 9 | 21 | 306 | 18 | 319 | 1.69e-16 | 79.3 |
| MsG0180004953.01.T01 | MTR_7g064980 | 22.121 | 330 | 214 | 8 | 5 | 317 | 14 | 317 | 9.93e-16 | 77.0 |
| MsG0180004953.01.T01 | MTR_2g102010 | 23.358 | 274 | 172 | 8 | 30 | 293 | 30 | 275 | 1.24e-15 | 76.3 |
| MsG0180004953.01.T01 | MTR_2g102010 | 27.473 | 182 | 110 | 5 | 33 | 209 | 126 | 290 | 5.06e-13 | 68.9 |
| MsG0180004953.01.T01 | MTR_7g109135 | 26.230 | 244 | 159 | 8 | 72 | 311 | 1 | 227 | 2.25e-15 | 74.7 |
| MsG0180004953.01.T01 | MTR_8g096050 | 25.763 | 295 | 187 | 9 | 22 | 310 | 232 | 500 | 3.69e-15 | 76.3 |
| MsG0180004953.01.T01 | MTR_8g096050 | 26.154 | 195 | 119 | 6 | 4 | 192 | 306 | 481 | 4.82e-14 | 72.8 |
| MsG0180004953.01.T01 | MTR_8g076760 | 24.422 | 303 | 185 | 11 | 33 | 315 | 30 | 308 | 9.11e-15 | 73.9 |
| MsG0180004953.01.T01 | MTR_8g027975 | 25.728 | 206 | 121 | 6 | 5 | 191 | 139 | 331 | 3.80e-14 | 72.8 |
| MsG0180004953.01.T01 | MTR_8g027975 | 23.101 | 316 | 198 | 10 | 26 | 315 | 60 | 356 | 9.50e-12 | 65.5 |
| MsG0180004953.01.T01 | MTR_3g098460 | 23.729 | 295 | 193 | 9 | 22 | 310 | 210 | 478 | 5.64e-14 | 72.8 |
| MsG0180004953.01.T01 | MTR_3g098460 | 26.776 | 183 | 107 | 5 | 16 | 192 | 298 | 459 | 7.29e-14 | 72.4 |
| MsG0180004953.01.T01 | MTR_7g068340 | 20.962 | 291 | 192 | 8 | 31 | 315 | 101 | 359 | 2.13e-13 | 70.5 |
| MsG0180004953.01.T01 | MTR_1g012030 | 21.595 | 301 | 200 | 9 | 16 | 310 | 138 | 408 | 5.95e-13 | 69.3 |
| MsG0180004953.01.T01 | MTR_1g012030 | 25.806 | 186 | 115 | 4 | 31 | 214 | 247 | 411 | 9.22e-11 | 62.8 |
| MsG0180004953.01.T01 | MTR_8g098240 | 25.418 | 299 | 185 | 8 | 21 | 314 | 324 | 589 | 6.63e-13 | 69.7 |
| MsG0180004953.01.T01 | MTR_5g009500 | 27.094 | 203 | 117 | 6 | 7 | 191 | 127 | 316 | 1.05e-12 | 68.2 |
| MsG0180004953.01.T01 | MTR_5g009500 | 26.596 | 188 | 119 | 4 | 142 | 314 | 157 | 340 | 2.21e-12 | 67.4 |
| MsG0180004953.01.T01 | MTR_3g104600 | 21.474 | 312 | 218 | 8 | 16 | 314 | 34 | 331 | 1.14e-12 | 68.2 |
| MsG0180004953.01.T01 | MTR_5g081150 | 22.293 | 314 | 202 | 6 | 13 | 309 | 30 | 318 | 1.17e-12 | 68.2 |
| MsG0180004953.01.T01 | MTR_7g109135 | 26.126 | 222 | 143 | 8 | 94 | 311 | 2 | 206 | 1.27e-12 | 66.6 |
| MsG0180004953.01.T01 | MTR_4g119770 | 25.490 | 255 | 149 | 8 | 21 | 250 | 18 | 256 | 5.70e-12 | 65.5 |
| MsG0180004953.01.T01 | MTR_4g119770 | 21.973 | 223 | 140 | 6 | 108 | 312 | 4 | 210 | 7.80e-12 | 64.7 |
| MsG0180004953.01.T01 | MTR_3g107510 | 22.109 | 294 | 197 | 8 | 21 | 310 | 126 | 391 | 7.58e-12 | 65.9 |
| MsG0180004953.01.T01 | MTR_6g034515 | 23.345 | 287 | 179 | 9 | 33 | 309 | 83 | 338 | 7.71e-12 | 65.9 |
| MsG0180004953.01.T01 | MTR_4g114320 | 23.834 | 193 | 115 | 5 | 31 | 217 | 232 | 398 | 3.24e-11 | 63.9 |
| MsG0180004953.01.T01 | MTR_7g015870 | 21.905 | 315 | 185 | 11 | 32 | 317 | 36 | 318 | 6.91e-11 | 62.8 |
| MsG0180004953.01.T01 | MTR_5g073040 | 22.074 | 299 | 197 | 8 | 21 | 311 | 43 | 313 | 6.99e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180004953.01.T01 | AT1G14140 | 68.710 | 310 | 76 | 5 | 13 | 317 | 12 | 305 | 5.82e-152 | 428 |
| MsG0180004953.01.T01 | AT5G58970 | 35.430 | 302 | 164 | 6 | 18 | 310 | 17 | 296 | 5.17e-55 | 181 |
| MsG0180004953.01.T01 | AT4G24570 | 32.812 | 320 | 164 | 7 | 22 | 311 | 11 | 309 | 2.29e-52 | 175 |
| MsG0180004953.01.T01 | AT3G54110 | 34.122 | 296 | 174 | 6 | 20 | 311 | 18 | 296 | 6.87e-52 | 173 |
| MsG0180004953.01.T01 | AT3G54110 | 26.961 | 204 | 124 | 5 | 21 | 222 | 126 | 306 | 6.34e-13 | 68.6 |
| MsG0180004953.01.T01 | AT2G22500 | 33.333 | 309 | 175 | 6 | 22 | 311 | 11 | 307 | 1.50e-48 | 165 |
| MsG0180004953.01.T01 | AT4G03115 | 29.900 | 301 | 183 | 5 | 19 | 317 | 40 | 314 | 2.65e-42 | 149 |
| MsG0180004953.01.T01 | AT4G03115 | 29.900 | 301 | 183 | 5 | 19 | 317 | 72 | 346 | 6.77e-42 | 148 |
| MsG0180004953.01.T01 | AT5G09470 | 33.210 | 271 | 161 | 6 | 41 | 309 | 77 | 329 | 4.70e-40 | 143 |
| MsG0180004953.01.T01 | AT4G03115 | 30.224 | 268 | 161 | 4 | 50 | 317 | 2 | 243 | 6.64e-39 | 137 |
| MsG0180004953.01.T01 | AT5G19760 | 31.633 | 294 | 171 | 6 | 23 | 311 | 24 | 292 | 7.69e-39 | 139 |
| MsG0180004953.01.T01 | AT4G03115 | 30.303 | 264 | 158 | 4 | 54 | 317 | 14 | 251 | 4.96e-38 | 135 |
| MsG0180004953.01.T01 | AT5G58970 | 32.540 | 252 | 144 | 6 | 18 | 258 | 17 | 253 | 5.24e-34 | 125 |
| MsG0180004953.01.T01 | AT5G58970 | 27.528 | 178 | 125 | 3 | 137 | 310 | 27 | 204 | 3.34e-16 | 77.8 |
| MsG0180004953.01.T01 | AT5G01340 | 27.609 | 297 | 186 | 9 | 14 | 302 | 14 | 289 | 2.09e-24 | 101 |
| MsG0180004953.01.T01 | AT2G47490 | 28.421 | 285 | 180 | 10 | 33 | 311 | 33 | 299 | 6.45e-23 | 97.1 |
| MsG0180004953.01.T01 | AT1G25380 | 26.990 | 289 | 181 | 9 | 33 | 311 | 37 | 305 | 4.77e-22 | 95.5 |
| MsG0180004953.01.T01 | AT1G25380 | 26.990 | 289 | 181 | 9 | 33 | 311 | 37 | 305 | 4.77e-22 | 95.5 |
| MsG0180004953.01.T01 | AT5G46800 | 26.481 | 287 | 187 | 6 | 33 | 309 | 24 | 296 | 1.37e-21 | 93.2 |
| MsG0180004953.01.T01 | AT5G46800 | 26.481 | 287 | 187 | 6 | 33 | 309 | 24 | 296 | 1.37e-21 | 93.2 |
| MsG0180004953.01.T01 | AT5G46800 | 26.481 | 287 | 187 | 6 | 33 | 309 | 24 | 296 | 1.37e-21 | 93.2 |
| MsG0180004953.01.T01 | AT4G03115 | 26.667 | 210 | 127 | 4 | 19 | 226 | 40 | 224 | 2.93e-19 | 85.1 |
| MsG0180004953.01.T01 | AT4G03115 | 26.667 | 210 | 127 | 4 | 19 | 226 | 40 | 224 | 3.62e-19 | 85.1 |
| MsG0180004953.01.T01 | AT3G53940 | 22.393 | 326 | 213 | 7 | 2 | 311 | 58 | 359 | 6.93e-16 | 77.8 |
| MsG0180004953.01.T01 | AT1G79900 | 25.843 | 267 | 160 | 7 | 32 | 293 | 31 | 264 | 1.06e-15 | 76.6 |
| MsG0180004953.01.T01 | AT1G79900 | 27.320 | 194 | 112 | 4 | 33 | 223 | 126 | 293 | 2.48e-13 | 69.7 |
| MsG0180004953.01.T01 | AT5G61810 | 24.013 | 304 | 194 | 9 | 12 | 310 | 59 | 330 | 2.90e-15 | 75.9 |
| MsG0180004953.01.T01 | AT5G07320 | 23.810 | 294 | 188 | 8 | 26 | 315 | 218 | 479 | 3.72e-15 | 76.3 |
| MsG0180004953.01.T01 | AT4G32400 | 23.588 | 301 | 194 | 9 | 16 | 310 | 113 | 383 | 8.50e-15 | 74.7 |
| MsG0180004953.01.T01 | AT4G32400 | 25.616 | 203 | 127 | 5 | 18 | 217 | 208 | 389 | 4.00e-11 | 63.9 |
| MsG0180004953.01.T01 | AT5G61810 | 23.948 | 309 | 198 | 9 | 12 | 315 | 202 | 478 | 9.71e-15 | 75.1 |
| MsG0180004953.01.T01 | AT2G37890 | 21.865 | 311 | 211 | 7 | 13 | 311 | 41 | 331 | 1.01e-14 | 74.3 |
| MsG0180004953.01.T01 | AT2G33820 | 22.222 | 306 | 205 | 6 | 22 | 314 | 23 | 308 | 1.40e-14 | 73.6 |
| MsG0180004953.01.T01 | AT3G55640 | 22.086 | 326 | 218 | 8 | 5 | 316 | 27 | 330 | 2.74e-14 | 72.8 |
| MsG0180004953.01.T01 | AT3G55640 | 22.086 | 326 | 218 | 8 | 5 | 316 | 27 | 330 | 2.74e-14 | 72.8 |
| MsG0180004953.01.T01 | AT3G21390 | 23.207 | 237 | 151 | 6 | 91 | 312 | 13 | 233 | 2.83e-14 | 73.2 |
| MsG0180004953.01.T01 | AT3G21390 | 25.633 | 316 | 189 | 12 | 22 | 306 | 46 | 346 | 7.02e-12 | 65.9 |
| MsG0180004953.01.T01 | AT3G21390 | 23.288 | 219 | 138 | 5 | 108 | 312 | 9 | 211 | 3.58e-14 | 72.4 |
| MsG0180004953.01.T01 | AT3G21390 | 24.272 | 309 | 202 | 8 | 22 | 306 | 24 | 324 | 5.97e-12 | 65.9 |
| MsG0180004953.01.T01 | AT5G48970 | 24.383 | 324 | 186 | 8 | 21 | 306 | 26 | 328 | 5.42e-14 | 72.0 |
| MsG0180004953.01.T01 | AT1G14560 | 23.469 | 294 | 193 | 9 | 33 | 311 | 43 | 319 | 2.69e-13 | 70.1 |
| MsG0180004953.01.T01 | AT4G01100 | 25.405 | 185 | 109 | 5 | 23 | 191 | 101 | 272 | 2.90e-13 | 69.7 |
| MsG0180004953.01.T01 | AT4G01100 | 25.405 | 185 | 109 | 5 | 23 | 191 | 165 | 336 | 3.21e-13 | 70.1 |
| MsG0180004953.01.T01 | AT1G34065 | 24.671 | 304 | 175 | 9 | 14 | 311 | 72 | 327 | 3.56e-13 | 69.7 |
| MsG0180004953.01.T01 | AT4G01100 | 25.405 | 185 | 109 | 5 | 23 | 191 | 151 | 322 | 4.11e-13 | 69.7 |
| MsG0180004953.01.T01 | AT1G34065 | 24.671 | 304 | 175 | 9 | 14 | 311 | 79 | 334 | 4.68e-13 | 69.3 |
| MsG0180004953.01.T01 | AT5G42130 | 25.475 | 263 | 162 | 8 | 30 | 287 | 131 | 364 | 1.29e-12 | 68.6 |
| MsG0180004953.01.T01 | AT1G14560 | 25.092 | 271 | 167 | 10 | 33 | 288 | 43 | 292 | 1.29e-12 | 67.8 |
| MsG0180004953.01.T01 | AT5G15640 | 22.903 | 310 | 181 | 11 | 32 | 314 | 36 | 314 | 1.82e-12 | 67.4 |
| MsG0180004953.01.T01 | AT5G15640 | 22.903 | 310 | 181 | 11 | 32 | 314 | 43 | 321 | 2.11e-12 | 67.4 |
| MsG0180004953.01.T01 | AT3G51870 | 19.322 | 295 | 200 | 6 | 28 | 316 | 102 | 364 | 2.41e-12 | 67.4 |
| MsG0180004953.01.T01 | AT2G33820 | 21.656 | 314 | 205 | 7 | 22 | 314 | 23 | 316 | 3.10e-12 | 66.6 |
| MsG0180004953.01.T01 | AT3G48850 | 27.835 | 194 | 120 | 4 | 22 | 215 | 76 | 249 | 5.82e-12 | 66.2 |
| MsG0180004953.01.T01 | AT4G39460 | 24.913 | 289 | 173 | 6 | 23 | 310 | 64 | 309 | 9.15e-12 | 65.5 |
| MsG0180004953.01.T01 | AT4G39460 | 24.913 | 289 | 173 | 6 | 23 | 310 | 64 | 309 | 9.15e-12 | 65.5 |
| MsG0180004953.01.T01 | AT4G39460 | 24.913 | 289 | 173 | 6 | 23 | 310 | 64 | 309 | 9.15e-12 | 65.5 |
| MsG0180004953.01.T01 | AT4G11440 | 24.315 | 292 | 183 | 6 | 33 | 316 | 346 | 607 | 1.07e-11 | 65.9 |
| MsG0180004953.01.T01 | AT4G11440 | 24.315 | 292 | 183 | 6 | 33 | 316 | 346 | 607 | 1.07e-11 | 65.9 |
| MsG0180004953.01.T01 | AT1G74240 | 28.652 | 178 | 97 | 5 | 33 | 192 | 150 | 315 | 5.23e-11 | 63.5 |
| MsG0180004953.01.T01 | AT1G74240 | 28.652 | 178 | 97 | 5 | 33 | 192 | 102 | 267 | 5.62e-11 | 63.2 |
| MsG0180004953.01.T01 | AT1G07030 | 23.390 | 295 | 199 | 7 | 21 | 311 | 44 | 315 | 9.70e-11 | 62.4 |
Find 111 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAGGCTCTTTGGATATT+AGG | 0.207663 | 1:+84911279 | None:intergenic |
| GGTATTCAACCTCGGTATTC+AGG | 0.217370 | 1:-84911369 | MsG0180004953.01.T01:CDS |
| GTCCGTGGCAATTTGTGTTC+TGG | 0.217832 | 1:-84910963 | MsG0180004953.01.T01:CDS |
| AGGTCCTCTTGGTCTTTATA+AGG | 0.243262 | 1:-84912650 | MsG0180004953.01.T01:CDS |
| TGCTGGGCTCTCTTCTTTCT+AGG | 0.261306 | 1:-84910914 | None:intergenic |
| GATGAATCAGGCAGCTAAAA+AGG | 0.273180 | 1:-84911094 | MsG0180004953.01.T01:CDS |
| AATGGACCACCCTCTATTAT+TGG | 0.311443 | 1:-84912538 | MsG0180004953.01.T01:CDS |
| AGTGTTATTTCTTCCGATAA+TGG | 0.328349 | 1:-84912556 | MsG0180004953.01.T01:CDS |
| TGTTCACTAAGAAGGCTCTT+TGG | 0.330924 | 1:+84911271 | None:intergenic |
| TTGTTTAGCGTGATCATAAC+AGG | 0.343296 | 1:+84911236 | None:intergenic |
| TTTGAAAGTGTTGAGGAATC+AGG | 0.357819 | 1:+84913014 | None:intergenic |
| CTGTTGATTGCCTGATTTCA+TGG | 0.359256 | 1:+84912852 | None:intergenic |
| TCCGTGGCAATTTGTGTTCT+GGG | 0.361223 | 1:-84910962 | MsG0180004953.01.T01:CDS |
| AACAGGTGTCTAAGAATTGC+TGG | 0.373496 | 1:+84912619 | None:intergenic |
| TGTGGGGAAGAATCCTTTCC+AGG | 0.374087 | 1:+84910999 | None:intergenic |
| GGTCCTCTTGGTCTTTATAA+GGG | 0.374611 | 1:-84912649 | MsG0180004953.01.T01:CDS |
| GCTGTTGTTGGTGGAATCTC+TGG | 0.388443 | 1:-84912511 | MsG0180004953.01.T01:CDS |
| GTGAAGACTGTTAAAGTTGA+AGG | 0.391518 | 1:-84911033 | MsG0180004953.01.T01:CDS |
| TACACACCTATTCGAATTGT+TGG | 0.393931 | 1:-84912595 | MsG0180004953.01.T01:CDS |
| TTACGCGTACTTGTTCTTTG+TGG | 0.404607 | 1:+84913080 | None:intergenic |
| ATTATTGGCAAGGCTGTTGT+TGG | 0.411276 | 1:-84912523 | MsG0180004953.01.T01:CDS |
| TTCGAATAGGTGTGTAGAAC+AGG | 0.411509 | 1:+84912602 | None:intergenic |
| ATTAAAGCTGAAGGATTTCA+AGG | 0.413857 | 1:-84911321 | MsG0180004953.01.T01:CDS |
| TGGTGGAATCTCTGGCAGTA+TGG | 0.414492 | 1:-84912503 | MsG0180004953.01.T01:CDS |
| CTCTCATCAACTCGTCCAAC+CGG | 0.418252 | 1:-84912709 | MsG0180004953.01.T01:CDS |
| ACACACCTATTCGAATTGTT+GGG | 0.430490 | 1:-84912594 | MsG0180004953.01.T01:CDS |
| GAGAAGTTTAGAAAATTTGC+TGG | 0.430860 | 1:-84910931 | MsG0180004953.01.T01:CDS |
| TTCCCCACATGGGCAAGGCT+TGG | 0.433242 | 1:-84910985 | MsG0180004953.01.T01:CDS |
| CATGAAATCAGGCAATCAAC+AGG | 0.441619 | 1:-84912851 | MsG0180004953.01.T01:CDS |
| TTGTATGTACCCATGAAATC+AGG | 0.442452 | 1:-84912862 | MsG0180004953.01.T01:exon |
| CCATAGACTTGATCAAAACT+AGG | 0.447982 | 1:-84912753 | MsG0180004953.01.T01:CDS |
| CAAGACTAGAATGATGAATC+AGG | 0.448668 | 1:-84911106 | MsG0180004953.01.T01:CDS |
| AATAGAGGGTGGTCCATTAT+CGG | 0.449525 | 1:+84912543 | None:intergenic |
| TGACAAGGTACACAGGCATC+AGG | 0.455156 | 1:+84912954 | None:intergenic |
| AACAGCCTTGCCAATAATAG+AGG | 0.458012 | 1:+84912528 | None:intergenic |
| ATTTGTGTTAAAGCATCAAA+TGG | 0.458019 | 1:+84911345 | None:intergenic |
| GATTCCTCAACACTTTCAAA+TGG | 0.469409 | 1:-84913011 | MsG0180004953.01.T01:five_prime_UTR |
| CCAACCGGTGCATTTCGAAT+AGG | 0.474810 | 1:-84912694 | MsG0180004953.01.T01:CDS |
| TAGAAGCTCTTATGATTGCT+TGG | 0.474971 | 1:-84911055 | MsG0180004953.01.T01:CDS |
| TTATTTACAATTAGTAGTAC+AGG | 0.483718 | 1:-84911457 | MsG0180004953.01.T01:CDS |
| AAAGAAAATATGCACGGGAC+TGG | 0.488413 | 1:+84912903 | None:intergenic |
| GATAGTCAAATGATGAGAAA+AGG | 0.492159 | 1:-84911390 | MsG0180004953.01.T01:CDS |
| GTATTCAACCTCGGTATTCA+GGG | 0.495519 | 1:-84911368 | MsG0180004953.01.T01:CDS |
| TCATACCCAACAATTCGAAT+AGG | 0.500273 | 1:+84912589 | None:intergenic |
| CTCACCTTGACAAGATCAGC+CGG | 0.501511 | 1:+84911423 | None:intergenic |
| ATTCGTGAACAAGGTCCTCT+TGG | 0.501888 | 1:-84912661 | MsG0180004953.01.T01:CDS |
| ACACAAATCATTAAAGCTGA+AGG | 0.503532 | 1:-84911330 | MsG0180004953.01.T01:CDS |
| CTAGTCTTGACAACGTCGGC+TGG | 0.509654 | 1:+84911120 | None:intergenic |
| CTCAACACTTTCAAATGGCA+TGG | 0.512866 | 1:-84913006 | MsG0180004953.01.T01:five_prime_UTR |
| TTGTTGGGTATGAGCACCTC+AGG | 0.513241 | 1:-84912579 | MsG0180004953.01.T01:CDS |
| AAAACTAGGCTTCAACTCCA+TGG | 0.514890 | 1:-84912739 | MsG0180004953.01.T01:CDS |
| AAGAGCCTTCTTAGTGAACA+TGG | 0.517766 | 1:-84911268 | MsG0180004953.01.T01:CDS |
| ACTAACATCATTATCGGCAA+TGG | 0.521097 | 1:-84912797 | MsG0180004953.01.T01:CDS |
| ACATTAGCTTCCATCATGTC+AGG | 0.524522 | 1:-84911168 | MsG0180004953.01.T01:CDS |
| AAACTAGGCTTCAACTCCAT+GGG | 0.527400 | 1:-84912738 | MsG0180004953.01.T01:CDS |
| TATGGGGAAAGTTGTGGACT+CGG | 0.536807 | 1:+84912771 | None:intergenic |
| TGTTGATTGCCTGATTTCAT+GGG | 0.542008 | 1:+84912853 | None:intergenic |
| AGAAGTTTAGAAAATTTGCT+GGG | 0.542066 | 1:-84910930 | MsG0180004953.01.T01:CDS |
| TTCCATCATGTCAGGTCTTG+CGG | 0.542079 | 1:-84911160 | MsG0180004953.01.T01:CDS |
| AATCTCTGGCAGTATGGCTC+AGG | 0.544027 | 1:-84912497 | MsG0180004953.01.T01:intron |
| AGTACAGGTTATAGCAAGCC+CGG | 0.545462 | 1:-84911442 | MsG0180004953.01.T01:CDS |
| GGAATAAGAGCACCCTGGAA+AGG | 0.548680 | 1:-84911012 | MsG0180004953.01.T01:CDS |
| TGCCGCAAGACCTGACATGA+TGG | 0.548886 | 1:+84911158 | None:intergenic |
| ATTGGCAAGGCTGTTGTTGG+TGG | 0.554471 | 1:-84912520 | MsG0180004953.01.T01:CDS |
| GATTCTTCCCCACATGGGCA+AGG | 0.557802 | 1:-84910990 | MsG0180004953.01.T01:CDS |
| GACAAGGTACACAGGCATCA+GGG | 0.560617 | 1:+84912955 | None:intergenic |
| CGGACCAAGCCTTGCCCATG+TGG | 0.564025 | 1:+84910981 | None:intergenic |
| AGGATTTCAAGGACTGTGGA+AGG | 0.566008 | 1:-84911310 | MsG0180004953.01.T01:CDS |
| ACTTTCAAATGGCATGGCTG+AGG | 0.570189 | 1:-84913000 | MsG0180004953.01.T01:five_prime_UTR |
| GGAAAGGATTCTTCCCCACA+TGG | 0.581691 | 1:-84910996 | MsG0180004953.01.T01:CDS |
| CCTATTCGAAATGCACCGGT+TGG | 0.586369 | 1:+84912694 | None:intergenic |
| GACCAAGCCTTGCCCATGTG+GGG | 0.588505 | 1:+84910983 | None:intergenic |
| CATGGGCAAGGCTTGGTCCG+TGG | 0.592432 | 1:-84910978 | MsG0180004953.01.T01:CDS |
| AACATCATTATCGGCAATGG+TGG | 0.595880 | 1:-84912794 | MsG0180004953.01.T01:CDS |
| TACGCCTATTCGAAATGCAC+CGG | 0.596633 | 1:+84912690 | None:intergenic |
| GGTACACAGGCATCAGGGGT+TGG | 0.597572 | 1:+84912960 | None:intergenic |
| CATGCCATTTGAAAGTGTTG+AGG | 0.599549 | 1:+84913007 | None:intergenic |
| CAAGTCTATGGGGAAAGTTG+TGG | 0.599944 | 1:+84912765 | None:intergenic |
| CGGCTGATCTTGTCAAGGTG+AGG | 0.604258 | 1:-84911422 | MsG0180004953.01.T01:CDS |
| GGACCAAGCCTTGCCCATGT+GGG | 0.604525 | 1:+84910982 | None:intergenic |
| TCACCTTGACAAGATCAGCC+GGG | 0.604841 | 1:+84911424 | None:intergenic |
| GTGGGGAAGAATCCTTTCCA+GGG | 0.610495 | 1:+84911000 | None:intergenic |
| ACCACCCTCTATTATTGGCA+AGG | 0.614676 | 1:-84912533 | MsG0180004953.01.T01:CDS |
| GAGCCTTCTTAGTGAACATG+GGG | 0.615946 | 1:-84911266 | MsG0180004953.01.T01:CDS |
| CTGAAGGATTTCAAGGACTG+TGG | 0.616907 | 1:-84911314 | MsG0180004953.01.T01:CDS |
| AGAGCCTTCTTAGTGAACAT+GGG | 0.617274 | 1:-84911267 | MsG0180004953.01.T01:CDS |
| TTGATGAGAGTGACTCCCCA+TGG | 0.622723 | 1:+84912722 | None:intergenic |
| ACCCAGAACACAAATTGCCA+CGG | 0.626367 | 1:+84910961 | None:intergenic |
| GGATTTCAAGGACTGTGGAA+GGG | 0.631072 | 1:-84911309 | MsG0180004953.01.T01:CDS |
| AATGAATTGACAAGGTACAC+AGG | 0.643184 | 1:+84912947 | None:intergenic |
| ATGAAATCAGGCAATCAACA+GGG | 0.649581 | 1:-84912850 | MsG0180004953.01.T01:CDS |
| TATTAAAAGTAAGATAGCTG+AGG | 0.649871 | 1:-84911208 | MsG0180004953.01.T01:CDS |
| TTGAAGGAATAAGAGCACCC+TGG | 0.653386 | 1:-84911017 | MsG0180004953.01.T01:CDS |
| ACAAGGTACACAGGCATCAG+GGG | 0.655597 | 1:+84912956 | None:intergenic |
| ACAGCCTTGCCAATAATAGA+GGG | 0.656484 | 1:+84912529 | None:intergenic |
| CGGAAGAAATAACACTCCTG+AGG | 0.669468 | 1:+84912563 | None:intergenic |
| TGAGAAAAGGTATTCAACCT+CGG | 0.670567 | 1:-84911377 | MsG0180004953.01.T01:CDS |
| AAGCCCTTATAAAGACCAAG+AGG | 0.670932 | 1:+84912646 | None:intergenic |
| ATCAATACAATGAATTGACA+AGG | 0.672341 | 1:+84912939 | None:intergenic |
| GTAGACATTATTCGTGAACA+AGG | 0.674981 | 1:-84912670 | MsG0180004953.01.T01:CDS |
| GAAAGGATTCTTCCCCACAT+GGG | 0.675704 | 1:-84910995 | MsG0180004953.01.T01:CDS |
| GCCTTGCCAATAATAGAGGG+TGG | 0.679136 | 1:+84912532 | None:intergenic |
| AACTAGGCTTCAACTCCATG+GGG | 0.680015 | 1:-84912737 | MsG0180004953.01.T01:CDS |
| AAGCCCGGCTGATCTTGTCA+AGG | 0.681297 | 1:-84911427 | MsG0180004953.01.T01:CDS |
| CATGATGGAAGCTAATGTGT+GGG | 0.692601 | 1:+84911173 | None:intergenic |
| GTTGAGGAATCAGGATGACA+CGG | 0.692734 | 1:+84913023 | None:intergenic |
| CATTCTAGTCTTGACAACGT+CGG | 0.705215 | 1:+84911116 | None:intergenic |
| AAATCAGGCAATCAACAGGG+TGG | 0.710195 | 1:-84912847 | MsG0180004953.01.T01:CDS |
| ACATGATGGAAGCTAATGTG+TGG | 0.716855 | 1:+84911172 | None:intergenic |
| TCAAATGGCCCTGAATACCG+AGG | 0.724190 | 1:+84911360 | None:intergenic |
| AGCCTTCTTAGTGAACATGG+GGG | 0.797499 | 1:-84911265 | MsG0180004953.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAGATTATTATATATTTAA+AGG | - | Chr1:84911672-84911691 | MsG0180004953.01.T01:intron | 10.0% |
| !! | GAAATAAAATATTAGGATTA+TGG | - | Chr1:84912299-84912318 | MsG0180004953.01.T01:intron | 15.0% |
| !!! | ATTTTATGATTTTAACACAA+TGG | + | Chr1:84912406-84912425 | None:intergenic | 15.0% |
| !! | GAATCAGAATTTATAACAAA+AGG | + | Chr1:84912081-84912100 | None:intergenic | 20.0% |
| !! | TTATTTACAATTAGTAGTAC+AGG | - | Chr1:84912541-84912560 | MsG0180004953.01.T01:CDS | 20.0% |
| !!! | GAAACTAAAATCCTTTAAAA+AGG | - | Chr1:84912196-84912215 | MsG0180004953.01.T01:intron | 20.0% |
| !!! | GATTTTACTAACATCATTAT+CGG | - | Chr1:84911195-84911214 | MsG0180004953.01.T01:CDS | 20.0% |
| !!! | TCATAAAATGCAATTTTTCA+AGG | - | Chr1:84912417-84912436 | MsG0180004953.01.T01:intron | 20.0% |
| !!! | TTTTACTATGTTCATAAATC+CGG | + | Chr1:84911836-84911855 | None:intergenic | 20.0% |
| !!! | TTTTAGTTTCCTAAGTTTTT+TGG | + | Chr1:84912186-84912205 | None:intergenic | 20.0% |
| ! | AGAGGTGGAAATAAAATATT+AGG | - | Chr1:84912292-84912311 | MsG0180004953.01.T01:intron | 25.0% |
| ! | ATCAATACAATGAATTGACA+AGG | + | Chr1:84911062-84911081 | None:intergenic | 25.0% |
| ! | ATGTTTATCTTAGTTACTAG+TGG | - | Chr1:84911950-84911969 | MsG0180004953.01.T01:intron | 25.0% |
| ! | TATTAAAAGTAAGATAGCTG+AGG | - | Chr1:84912790-84912809 | MsG0180004953.01.T01:CDS | 25.0% |
| ! | TGTTTATCTTAGTTACTAGT+GGG | - | Chr1:84911951-84911970 | MsG0180004953.01.T01:intron | 25.0% |
| ! | TTAGTAAAGCTTATGCTTAA+GGG | + | Chr1:84912111-84912130 | None:intergenic | 25.0% |
| !! | AAATTTTCTAAACTTCTCGT+AGG | + | Chr1:84913065-84913084 | None:intergenic | 25.0% |
| !! | AGAAGTTTAGAAAATTTGCT+GGG | - | Chr1:84913068-84913087 | MsG0180004953.01.T01:five_prime_UTR | 25.0% |
| !! | ATTTGTGTTAAAGCATCAAA+TGG | + | Chr1:84912656-84912675 | None:intergenic | 25.0% |
| !! | CAATTGATTGATTCACTATT+AGG | - | Chr1:84911894-84911913 | MsG0180004953.01.T01:intron | 25.0% |
| !! | GACTGTAACTTAACTATTTT+TGG | + | Chr1:84911731-84911750 | None:intergenic | 25.0% |
| ACACAAATCATTAAAGCTGA+AGG | - | Chr1:84912668-84912687 | MsG0180004953.01.T01:CDS | 30.0% | |
| ATTAAAGCTGAAGGATTTCA+AGG | - | Chr1:84912677-84912696 | MsG0180004953.01.T01:CDS | 30.0% | |
| CTTAGTAAAGCTTATGCTTA+AGG | + | Chr1:84912112-84912131 | None:intergenic | 30.0% | |
| GAACATAGTAAAAGAATGTG+TGG | - | Chr1:84911843-84911862 | MsG0180004953.01.T01:intron | 30.0% | |
| GAGAAGTTTAGAAAATTTGC+TGG | - | Chr1:84913067-84913086 | MsG0180004953.01.T01:five_prime_UTR | 30.0% | |
| GATAGTCAAATGATGAGAAA+AGG | - | Chr1:84912608-84912627 | MsG0180004953.01.T01:CDS | 30.0% | |
| GCTCACTTTATATTTGTCTT+TGG | - | Chr1:84912494-84912513 | MsG0180004953.01.T01:intron | 30.0% | |
| GTTTAACTATTAGCATCTCA+TGG | + | Chr1:84912349-84912368 | None:intergenic | 30.0% | |
| GTTTATCTTAGTTACTAGTG+GGG | - | Chr1:84911952-84911971 | MsG0180004953.01.T01:intron | 30.0% | |
| ! | TGATTGATTCACTATTAGGT+AGG | - | Chr1:84911898-84911917 | MsG0180004953.01.T01:intron | 30.0% |
| !! | AGTGTTATTTCTTCCGATAA+TGG | - | Chr1:84911442-84911461 | MsG0180004953.01.T01:CDS | 30.0% |
| !! | ATATTTTCTTTTTGGCGAGT+GGG | - | Chr1:84911107-84911126 | MsG0180004953.01.T01:CDS | 30.0% |
| !!! | AACTTAACTATTTTTGGTCC+AGG | + | Chr1:84911725-84911744 | None:intergenic | 30.0% |
| !!! | CTAGTTTTGATCAAGTCTAT+GGG | + | Chr1:84911247-84911266 | None:intergenic | 30.0% |
| !!! | TAGTTTTGATCAAGTCTATG+GGG | + | Chr1:84911246-84911265 | None:intergenic | 30.0% |
| AAGAAGGCTCTTTGGATATT+AGG | + | Chr1:84912722-84912741 | None:intergenic | 35.0% | |
| AATGAATTGACAAGGTACAC+AGG | + | Chr1:84911054-84911073 | None:intergenic | 35.0% | |
| ACACACCTATTCGAATTGTT+GGG | - | Chr1:84911404-84911423 | MsG0180004953.01.T01:CDS | 35.0% | |
| ACTAACATCATTATCGGCAA+TGG | - | Chr1:84911201-84911220 | MsG0180004953.01.T01:CDS | 35.0% | |
| AGATGGTTGTCTAACATTTG+TGG | + | Chr1:84912160-84912179 | None:intergenic | 35.0% | |
| ATCTTTCAAAATCTCACACC+TGG | - | Chr1:84912258-84912277 | MsG0180004953.01.T01:intron | 35.0% | |
| ATGAAATCAGGCAATCAACA+GGG | - | Chr1:84911148-84911167 | MsG0180004953.01.T01:CDS | 35.0% | |
| CAAGACTAGAATGATGAATC+AGG | - | Chr1:84912892-84912911 | MsG0180004953.01.T01:five_prime_UTR | 35.0% | |
| CCATAGACTTGATCAAAACT+AGG | - | Chr1:84911245-84911264 | MsG0180004953.01.T01:CDS | 35.0% | |
| CCATCTCAACCAAAAAACTT+AGG | - | Chr1:84912174-84912193 | MsG0180004953.01.T01:intron | 35.0% | |
| CGCCAAAAAGAAAATATGCA+CGG | + | Chr1:84911104-84911123 | None:intergenic | 35.0% | |
| GATGGTTGTCTAACATTTGT+GGG | + | Chr1:84912159-84912178 | None:intergenic | 35.0% | |
| GATTCCTCAACACTTTCAAA+TGG | - | Chr1:84910987-84911006 | MsG0180004953.01.T01:CDS | 35.0% | |
| GCCAAAAAGAAAATATGCAC+GGG | + | Chr1:84911103-84911122 | None:intergenic | 35.0% | |
| GGATAAAAGTTCCAAGATTC+AGG | - | Chr1:84911693-84911712 | MsG0180004953.01.T01:intron | 35.0% | |
| GTAGACATTATTCGTGAACA+AGG | - | Chr1:84911328-84911347 | MsG0180004953.01.T01:CDS | 35.0% | |
| GTCGAAAAACACAAAACTCA+TGG | + | Chr1:84911928-84911947 | None:intergenic | 35.0% | |
| GTGAAGACTGTTAAAGTTGA+AGG | - | Chr1:84912965-84912984 | MsG0180004953.01.T01:five_prime_UTR | 35.0% | |
| TACACACCTATTCGAATTGT+TGG | - | Chr1:84911403-84911422 | MsG0180004953.01.T01:CDS | 35.0% | |
| TAGAAGCTCTTATGATTGCT+TGG | - | Chr1:84912943-84912962 | MsG0180004953.01.T01:five_prime_UTR | 35.0% | |
| TCATACCCAACAATTCGAAT+AGG | + | Chr1:84911412-84911431 | None:intergenic | 35.0% | |
| TGGATTCATCTCCAAAGTTA+CGG | + | Chr1:84912460-84912479 | None:intergenic | 35.0% | |
| TTGTATGTACCCATGAAATC+AGG | - | Chr1:84911136-84911155 | MsG0180004953.01.T01:CDS | 35.0% | |
| TTGTTTAGCGTGATCATAAC+AGG | + | Chr1:84912765-84912784 | None:intergenic | 35.0% | |
| ! | TCCCGTGCATATTTTCTTTT+TGG | - | Chr1:84911099-84911118 | MsG0180004953.01.T01:CDS | 35.0% |
| ! | TGTTGATTGCCTGATTTCAT+GGG | + | Chr1:84911148-84911167 | None:intergenic | 35.0% |
| !! | CATATTTTCTTTTTGGCGAG+TGG | - | Chr1:84911106-84911125 | MsG0180004953.01.T01:CDS | 35.0% |
| !! | TGAGAAAAGGTATTCAACCT+CGG | - | Chr1:84912621-84912640 | MsG0180004953.01.T01:CDS | 35.0% |
| !! | TTTGAAAGTGTTGAGGAATC+AGG | + | Chr1:84910987-84911006 | None:intergenic | 35.0% |
| !!! | CCTAAGTTTTTTGGTTGAGA+TGG | + | Chr1:84912177-84912196 | None:intergenic | 35.0% |
| !!! | CCTAGTTTTGATCAAGTCTA+TGG | + | Chr1:84911248-84911267 | None:intergenic | 35.0% |
| AAAACTAGGCTTCAACTCCA+TGG | - | Chr1:84911259-84911278 | MsG0180004953.01.T01:CDS | 40.0% | |
| AAACTAGGCTTCAACTCCAT+GGG | - | Chr1:84911260-84911279 | MsG0180004953.01.T01:CDS | 40.0% | |
| AAAGAAAATATGCACGGGAC+TGG | + | Chr1:84911098-84911117 | None:intergenic | 40.0% | |
| AACAGCCTTGCCAATAATAG+AGG | + | Chr1:84911473-84911492 | None:intergenic | 40.0% | |
| AACAGGTGTCTAAGAATTGC+TGG | + | Chr1:84911382-84911401 | None:intergenic | 40.0% | |
| AACATCATTATCGGCAATGG+TGG | - | Chr1:84911204-84911223 | MsG0180004953.01.T01:CDS | 40.0% | |
| AAGAGCCTTCTTAGTGAACA+TGG | - | Chr1:84912730-84912749 | MsG0180004953.01.T01:CDS | 40.0% | |
| AAGCCCTTATAAAGACCAAG+AGG | + | Chr1:84911355-84911374 | None:intergenic | 40.0% | |
| AATAGAGGGTGGTCCATTAT+CGG | + | Chr1:84911458-84911477 | None:intergenic | 40.0% | |
| AATCAGGCAGCTAAAAAGGA+AGG | - | Chr1:84912908-84912927 | MsG0180004953.01.T01:five_prime_UTR | 40.0% | |
| AATGGACCACCCTCTATTAT+TGG | - | Chr1:84911460-84911479 | MsG0180004953.01.T01:CDS | 40.0% | |
| ACAGCCTTGCCAATAATAGA+GGG | + | Chr1:84911472-84911491 | None:intergenic | 40.0% | |
| AGAGCCTTCTTAGTGAACAT+GGG | - | Chr1:84912731-84912750 | MsG0180004953.01.T01:CDS | 40.0% | |
| ATCAGGCAGCTAAAAAGGAA+GGG | - | Chr1:84912909-84912928 | MsG0180004953.01.T01:five_prime_UTR | 40.0% | |
| ATGTTCATAAATCCGGCAGA+TGG | + | Chr1:84911829-84911848 | None:intergenic | 40.0% | |
| ATTATTGGCAAGGCTGTTGT+TGG | - | Chr1:84911475-84911494 | MsG0180004953.01.T01:intron | 40.0% | |
| CATGAAATCAGGCAATCAAC+AGG | - | Chr1:84911147-84911166 | MsG0180004953.01.T01:CDS | 40.0% | |
| CTCAACACTTTCAAATGGCA+TGG | - | Chr1:84910992-84911011 | MsG0180004953.01.T01:CDS | 40.0% | |
| GATGAATCAGGCAGCTAAAA+AGG | - | Chr1:84912904-84912923 | MsG0180004953.01.T01:five_prime_UTR | 40.0% | |
| GTATTCAACCTCGGTATTCA+GGG | - | Chr1:84912630-84912649 | MsG0180004953.01.T01:CDS | 40.0% | |
| GTGAGCAGTCAGTTAAAACA+TGG | + | Chr1:84912480-84912499 | None:intergenic | 40.0% | |
| TGTTCACTAAGAAGGCTCTT+TGG | + | Chr1:84912730-84912749 | None:intergenic | 40.0% | |
| TTACGCGTACTTGTTCTTTG+TGG | + | Chr1:84910921-84910940 | None:intergenic | 40.0% | |
| TTCGAATAGGTGTGTAGAAC+AGG | + | Chr1:84911399-84911418 | None:intergenic | 40.0% | |
| TTTCCAATGCACCGTAACTT+TGG | - | Chr1:84912446-84912465 | MsG0180004953.01.T01:intron | 40.0% | |
| ! | ACACGCGTACACCTTTTTAA+AGG | + | Chr1:84912210-84912229 | None:intergenic | 40.0% |
| ! | ACATGATGGAAGCTAATGTG+TGG | + | Chr1:84912829-84912848 | None:intergenic | 40.0% |
| ! | ACATTAGCTTCCATCATGTC+AGG | - | Chr1:84912830-84912849 | MsG0180004953.01.T01:CDS | 40.0% |
| ! | AGGTCCTCTTGGTCTTTATA+AGG | - | Chr1:84911348-84911367 | MsG0180004953.01.T01:CDS | 40.0% |
| ! | CATGATGGAAGCTAATGTGT+GGG | + | Chr1:84912828-84912847 | None:intergenic | 40.0% |
| ! | CTGTTGATTGCCTGATTTCA+TGG | + | Chr1:84911149-84911168 | None:intergenic | 40.0% |
| ! | GGTCCTCTTGGTCTTTATAA+GGG | - | Chr1:84911349-84911368 | MsG0180004953.01.T01:CDS | 40.0% |
| ! | GTGGGTTGCTAATTGTAACA+AGG | + | Chr1:84912141-84912160 | None:intergenic | 40.0% |
| !! | CAGATGGTGTTCTTTGAAGT+TGG | + | Chr1:84911813-84911832 | None:intergenic | 40.0% |
| !! | CATGCCATTTGAAAGTGTTG+AGG | + | Chr1:84910994-84911013 | None:intergenic | 40.0% |
| !! | CATTCTAGTCTTGACAACGT+CGG | + | Chr1:84912885-84912904 | None:intergenic | 40.0% |
| !! | TGGTGTTCTTTGAAGTTGGA+AGG | + | Chr1:84911809-84911828 | None:intergenic | 40.0% |
| AAATCAGGCAATCAACAGGG+TGG | - | Chr1:84911151-84911170 | MsG0180004953.01.T01:CDS | 45.0% | |
| AACTAGGCTTCAACTCCATG+GGG | - | Chr1:84911261-84911280 | MsG0180004953.01.T01:CDS | 45.0% | |
| ACCACCCTCTATTATTGGCA+AGG | - | Chr1:84911465-84911484 | MsG0180004953.01.T01:CDS | 45.0% | |
| ACCCAGAACACAAATTGCCA+CGG | + | Chr1:84913040-84913059 | None:intergenic | 45.0% | |
| ACTTTCAAATGGCATGGCTG+AGG | - | Chr1:84910998-84911017 | MsG0180004953.01.T01:CDS | 45.0% | |
| AGCCTTCTTAGTGAACATGG+GGG | - | Chr1:84912733-84912752 | MsG0180004953.01.T01:CDS | 45.0% | |
| AGGATTTCAAGGACTGTGGA+AGG | - | Chr1:84912688-84912707 | MsG0180004953.01.T01:CDS | 45.0% | |
| AGTACAGGTTATAGCAAGCC+CGG | - | Chr1:84912556-84912575 | MsG0180004953.01.T01:CDS | 45.0% | |
| ATACAAGAGACTGACCGACT+AGG | + | Chr1:84911981-84912000 | None:intergenic | 45.0% | |
| ATTCGTGAACAAGGTCCTCT+TGG | - | Chr1:84911337-84911356 | MsG0180004953.01.T01:CDS | 45.0% | |
| CAAGTCTATGGGGAAAGTTG+TGG | + | Chr1:84911236-84911255 | None:intergenic | 45.0% | |
| CGGAAGAAATAACACTCCTG+AGG | + | Chr1:84911438-84911457 | None:intergenic | 45.0% | |
| CTGAAGGATTTCAAGGACTG+TGG | - | Chr1:84912684-84912703 | MsG0180004953.01.T01:CDS | 45.0% | |
| CTTCAAAGAACACCATCTGC+CGG | - | Chr1:84911814-84911833 | MsG0180004953.01.T01:intron | 45.0% | |
| GAAAGGATTCTTCCCCACAT+GGG | - | Chr1:84913003-84913022 | MsG0180004953.01.T01:five_prime_UTR | 45.0% | |
| GAGCCTTCTTAGTGAACATG+GGG | - | Chr1:84912732-84912751 | MsG0180004953.01.T01:CDS | 45.0% | |
| GGATTTCAAGGACTGTGGAA+GGG | - | Chr1:84912689-84912708 | MsG0180004953.01.T01:CDS | 45.0% | |
| GGTATTCAACCTCGGTATTC+AGG | - | Chr1:84912629-84912648 | MsG0180004953.01.T01:CDS | 45.0% | |
| GTTGAGGAATCAGGATGACA+CGG | + | Chr1:84910978-84910997 | None:intergenic | 45.0% | |
| TACGCCTATTCGAAATGCAC+CGG | + | Chr1:84911311-84911330 | None:intergenic | 45.0% | |
| TATGGGGAAAGTTGTGGACT+CGG | + | Chr1:84911230-84911249 | None:intergenic | 45.0% | |
| TCCGTGGCAATTTGTGTTCT+GGG | - | Chr1:84913036-84913055 | MsG0180004953.01.T01:five_prime_UTR | 45.0% | |
| TCTCCAAAGTTACGGTGCAT+TGG | + | Chr1:84912452-84912471 | None:intergenic | 45.0% | |
| TGGCTCAGGTGAGAATTACA+TGG | - | Chr1:84911515-84911534 | MsG0180004953.01.T01:intron | 45.0% | |
| TTCCATCATGTCAGGTCTTG+CGG | - | Chr1:84912838-84912857 | MsG0180004953.01.T01:CDS | 45.0% | |
| TTCCCCCATGTTCACTAAGA+AGG | + | Chr1:84912738-84912757 | None:intergenic | 45.0% | |
| !! | TTGAAGGAATAAGAGCACCC+TGG | - | Chr1:84912981-84913000 | MsG0180004953.01.T01:five_prime_UTR | 45.0% |
| AATCCCTAGACCAAGGACCA+AGG | + | Chr1:84912021-84912040 | None:intergenic | 50.0% | |
| AATCTCTGGCAGTATGGCTC+AGG | - | Chr1:84911501-84911520 | MsG0180004953.01.T01:intron | 50.0% | |
| ACAAGGTACACAGGCATCAG+GGG | + | Chr1:84911045-84911064 | None:intergenic | 50.0% | |
| ACATAACGTCTGCCTTGCCT+TGG | - | Chr1:84912001-84912020 | MsG0180004953.01.T01:intron | 50.0% | |
| ATTGGCAAGGCTGTTGTTGG+TGG | - | Chr1:84911478-84911497 | MsG0180004953.01.T01:intron | 50.0% | |
| CCAACCGGTGCATTTCGAAT+AGG | - | Chr1:84911304-84911323 | MsG0180004953.01.T01:CDS | 50.0% | |
| CTCACCTTGACAAGATCAGC+CGG | + | Chr1:84912578-84912597 | None:intergenic | 50.0% | |
| CTCTCATCAACTCGTCCAAC+CGG | - | Chr1:84911289-84911308 | MsG0180004953.01.T01:CDS | 50.0% | |
| GACAAGGTACACAGGCATCA+GGG | + | Chr1:84911046-84911065 | None:intergenic | 50.0% | |
| GCCTTGCCAATAATAGAGGG+TGG | + | Chr1:84911469-84911488 | None:intergenic | 50.0% | |
| GGAAAGGATTCTTCCCCACA+TGG | - | Chr1:84913002-84913021 | MsG0180004953.01.T01:five_prime_UTR | 50.0% | |
| GTCCGTGGCAATTTGTGTTC+TGG | - | Chr1:84913035-84913054 | MsG0180004953.01.T01:five_prime_UTR | 50.0% | |
| GTGGGGAAGAATCCTTTCCA+GGG | + | Chr1:84913001-84913020 | None:intergenic | 50.0% | |
| TACTAGTGGGGTAGCCTAGT+CGG | - | Chr1:84911964-84911983 | MsG0180004953.01.T01:intron | 50.0% | |
| TCAAATGGCCCTGAATACCG+AGG | + | Chr1:84912641-84912660 | None:intergenic | 50.0% | |
| TCACCTTGACAAGATCAGCC+GGG | + | Chr1:84912577-84912596 | None:intergenic | 50.0% | |
| TGACAAGGTACACAGGCATC+AGG | + | Chr1:84911047-84911066 | None:intergenic | 50.0% | |
| TGGTCCTTGGTCTAGGGATT+CGG | - | Chr1:84912021-84912040 | MsG0180004953.01.T01:intron | 50.0% | |
| TGGTGGAATCTCTGGCAGTA+TGG | - | Chr1:84911495-84911514 | MsG0180004953.01.T01:intron | 50.0% | |
| TGTGGGGAAGAATCCTTTCC+AGG | + | Chr1:84913002-84913021 | None:intergenic | 50.0% | |
| TTGATGAGAGTGACTCCCCA+TGG | + | Chr1:84911279-84911298 | None:intergenic | 50.0% | |
| TTGCCTTGGTCCTTGGTCTA+GGG | - | Chr1:84912015-84912034 | MsG0180004953.01.T01:intron | 50.0% | |
| TTGTTGGGTATGAGCACCTC+AGG | - | Chr1:84911419-84911438 | MsG0180004953.01.T01:CDS | 50.0% | |
| ! | CCTATTCGAAATGCACCGGT+TGG | + | Chr1:84911307-84911326 | None:intergenic | 50.0% |
| ! | GCTGTTGTTGGTGGAATCTC+TGG | - | Chr1:84911487-84911506 | MsG0180004953.01.T01:intron | 50.0% |
| !! | GGAATAAGAGCACCCTGGAA+AGG | - | Chr1:84912986-84913005 | MsG0180004953.01.T01:five_prime_UTR | 50.0% |
| AAGCCCGGCTGATCTTGTCA+AGG | - | Chr1:84912571-84912590 | MsG0180004953.01.T01:CDS | 55.0% | |
| CCAAGATTCAGGCTTGAGCC+TGG | - | Chr1:84911704-84911723 | MsG0180004953.01.T01:intron | 55.0% | |
| CCAGGCTCAAGCCTGAATCT+TGG | + | Chr1:84911707-84911726 | None:intergenic | 55.0% | |
| CGCGTGCAAAGCTCTCACAT+AGG | + | Chr1:84912047-84912066 | None:intergenic | 55.0% | |
| CGGCTGATCTTGTCAAGGTG+AGG | - | Chr1:84912576-84912595 | MsG0180004953.01.T01:CDS | 55.0% | |
| CTAGACCAAGGACCAAGGCA+AGG | + | Chr1:84912016-84912035 | None:intergenic | 55.0% | |
| CTTGCCTTGGTCCTTGGTCT+AGG | - | Chr1:84912014-84912033 | MsG0180004953.01.T01:intron | 55.0% | |
| GAGAGCTTTGCACGCGTTTC+TGG | - | Chr1:84912051-84912070 | MsG0180004953.01.T01:intron | 55.0% | |
| GATTCTTCCCCACATGGGCA+AGG | - | Chr1:84913008-84913027 | MsG0180004953.01.T01:five_prime_UTR | 55.0% | |
| TAGGCCGAATCCCTAGACCA+AGG | + | Chr1:84912028-84912047 | None:intergenic | 55.0% | |
| TCTCACACCTGGTCTCATGC+TGG | - | Chr1:84912269-84912288 | MsG0180004953.01.T01:intron | 55.0% | |
| TGCCGCAAGACCTGACATGA+TGG | + | Chr1:84912843-84912862 | None:intergenic | 55.0% | |
| !! | CTAGTCTTGACAACGTCGGC+TGG | + | Chr1:84912881-84912900 | None:intergenic | 55.0% |
| CACCTCTCCAGCATGAGACC+AGG | + | Chr1:84912279-84912298 | None:intergenic | 60.0% | |
| CACCTGGTCTCATGCTGGAG+AGG | - | Chr1:84912274-84912293 | MsG0180004953.01.T01:intron | 60.0% | |
| CTGGTCTCATGCTGGAGAGG+TGG | - | Chr1:84912277-84912296 | MsG0180004953.01.T01:intron | 60.0% | |
| GACCAAGCCTTGCCCATGTG+GGG | + | Chr1:84913018-84913037 | None:intergenic | 60.0% | |
| GGACCAAGCCTTGCCCATGT+GGG | + | Chr1:84913019-84913038 | None:intergenic | 60.0% | |
| GGTACACAGGCATCAGGGGT+TGG | + | Chr1:84911041-84911060 | None:intergenic | 60.0% | |
| GTCTGCCTTGCCTTGGTCCT+TGG | - | Chr1:84912008-84912027 | MsG0180004953.01.T01:intron | 60.0% | |
| TTCCCCACATGGGCAAGGCT+TGG | - | Chr1:84913013-84913032 | MsG0180004953.01.T01:five_prime_UTR | 60.0% | |
| CGGACCAAGCCTTGCCCATG+TGG | + | Chr1:84913020-84913039 | None:intergenic | 65.0% | |
| ! | CATGGGCAAGGCTTGGTCCG+TGG | - | Chr1:84913020-84913039 | MsG0180004953.01.T01:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 84910915 | 84913105 | 84910915 | ID=MsG0180004953.01;Name=MsG0180004953.01 |
| Chr1 | mRNA | 84910915 | 84913105 | 84910915 | ID=MsG0180004953.01.T01;Parent=MsG0180004953.01;Name=MsG0180004953.01.T01;_AED=0.08;_eAED=0.08;_QI=233|0|0.5|1|1|1|2|0|317 |
| Chr1 | exon | 84910915 | 84911493 | 84910915 | ID=MsG0180004953.01.T01:exon:28001;Parent=MsG0180004953.01.T01 |
| Chr1 | exon | 84912498 | 84913105 | 84912498 | ID=MsG0180004953.01.T01:exon:28000;Parent=MsG0180004953.01.T01 |
| Chr1 | five_prime_UTR | 84912873 | 84913105 | 84912873 | ID=MsG0180004953.01.T01:five_prime_utr;Parent=MsG0180004953.01.T01 |
| Chr1 | CDS | 84912498 | 84912872 | 84912498 | ID=MsG0180004953.01.T01:cds;Parent=MsG0180004953.01.T01 |
| Chr1 | CDS | 84910915 | 84911493 | 84910915 | ID=MsG0180004953.01.T01:cds;Parent=MsG0180004953.01.T01 |
| Gene Sequence |
| Protein sequence |
