AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045481.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045481.01.T01 MTR_3g093380 44.737 152 59 4 46 172 30 181 1.77e-26 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045481.01.T01 AT5G24650 37.143 140 70 2 33 161 22 154 9.73e-18 79.0
MsG0880045481.01.T01 AT3G49560 35.156 128 72 1 33 149 27 154 1.36e-14 70.5

Find 56 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAAATGGTTTCAATCTT+TGG 0.185667 8:-59831742 MsG0880045481.01.T01:CDS
CGCTACAAACAGTTAGAAAA+TGG 0.242391 8:-59831755 MsG0880045481.01.T01:intron
TGCAGCATGGCGGCAGGTTT+TGG 0.247997 8:-59830939 MsG0880045481.01.T01:intron
TTCTCTAAGTCCATGATTAG+AGG 0.293793 8:-59834638 MsG0880045481.01.T01:CDS
CCGCCACCACCGCCGCTAAA+TGG 0.296404 8:-59831679 MsG0880045481.01.T01:CDS
GGGGTACTACAAGATAATTT+TGG 0.349357 8:+59830784 None:intergenic
CCATTTAGCGGCGGTGGTGG+CGG 0.420227 8:+59831679 None:intergenic
AGCGGCGGTGGTGGCGGTGA+CGG 0.438137 8:+59831685 None:intergenic
AGTCCATGATTAGAGGTTGC+TGG 0.445132 8:-59834631 MsG0880045481.01.T01:CDS
GGTGGTGGCGGTGACGGCGG+CGG 0.447863 8:+59831691 None:intergenic
ATGGGTGGGCCAGTCTCAAT+TGG 0.455108 8:-59830885 MsG0880045481.01.T01:CDS
TCGGAATCTGCTGTTGTGGC+TGG 0.458849 8:-59831458 MsG0880045481.01.T01:CDS
GAAAGGAAGATGTTCTATCT+AGG 0.460904 8:-59831394 MsG0880045481.01.T01:intron
CATTGTTATTTGGTATGGGT+GGG 0.461412 8:-59830899 MsG0880045481.01.T01:CDS
CAATTTGCAATGGCTCAAGC+TGG 0.462608 8:-59830858 MsG0880045481.01.T01:CDS
TTATCTTAGGTGCATTCGAC+AGG 0.470531 8:-59834686 MsG0880045481.01.T01:intron
TCATTGTTATTTGGTATGGG+TGG 0.474154 8:-59830900 MsG0880045481.01.T01:CDS
GAACCATTTAGCGGCGGTGG+TGG 0.475340 8:+59831676 None:intergenic
GGTGACGGCGGCGGCTTCAA+CGG 0.477177 8:+59831700 None:intergenic
GTTGTGGCTGGAGTGAATGC+TGG 0.490512 8:-59831446 MsG0880045481.01.T01:CDS
ATTTGTTGCAGCATGGCGGC+AGG 0.492718 8:-59830945 MsG0880045481.01.T01:intron
TACATCCTTTGATTCCTGCT+CGG 0.494172 8:-59831477 MsG0880045481.01.T01:CDS
ATCCCAGCAACCTCTAATCA+TGG 0.495121 8:+59834628 None:intergenic
AGCGAACCATTTAGCGGCGG+TGG 0.498335 8:+59831673 None:intergenic
TCTACTGCTCTAGGACTCCA+TGG 0.500665 8:+59830763 None:intergenic
GGCTCAAGCTGGGAATTTCA+AGG 0.501155 8:-59830847 MsG0880045481.01.T01:CDS
GAAGCTATGTCGAACAAGGC+GGG 0.501448 8:-59835699 MsG0880045481.01.T01:CDS
GTCCATGATTAGAGGTTGCT+GGG 0.503419 8:-59834630 MsG0880045481.01.T01:CDS
CACGGCATAATGAATACAAA+AGG 0.509570 8:+59831632 None:intergenic
AATTGTATTCCAATTGAGAC+TGG 0.521258 8:+59830876 None:intergenic
GGCGGCGGCTTCAACGGCGA+TGG 0.526354 8:+59831706 None:intergenic
CTGCTCGGAATCTGCTGTTG+TGG 0.544798 8:-59831462 MsG0880045481.01.T01:CDS
ATTAGATGCCTGTCGAATTG+TGG 0.544999 8:+59834596 None:intergenic
GCCGCTAAATGGTTCGCTGT+TGG 0.546210 8:-59831668 MsG0880045481.01.T01:CDS
ACCAACAGCGAACCATTTAG+CGG 0.551507 8:+59831667 None:intergenic
CTACTGCTCTAGGACTCCAT+GGG 0.552403 8:+59830764 None:intergenic
AGAGTACGCTCTACTGCTCT+AGG 0.556845 8:+59830754 None:intergenic
TGCATTCGACAGGTAAAAGA+AGG 0.558161 8:-59834676 MsG0880045481.01.T01:CDS
GACATAAGCCACAATTCGAC+AGG 0.558835 8:-59834604 MsG0880045481.01.T01:CDS
GGCGGTGGTGGCGGTGACGG+CGG 0.561068 8:+59831688 None:intergenic
AGATTCCGAGCAGGAATCAA+AGG 0.566532 8:+59831472 None:intergenic
AATTGGAATACAATTTGCAA+TGG 0.570489 8:-59830868 MsG0880045481.01.T01:CDS
AATTTGCAATGGCTCAAGCT+GGG 0.587849 8:-59830857 MsG0880045481.01.T01:CDS
CACAACAGCAGATTCCGAGC+AGG 0.588222 8:+59831463 None:intergenic
ACCAAATAACAATGAAAACA+TGG 0.590918 8:+59830908 None:intergenic
AGCTATGTCGAACAAGGCGG+GGG 0.591577 8:-59835697 MsG0880045481.01.T01:intron
AATTATCTTGTAGTACCCCA+TGG 0.605200 8:-59830780 MsG0880045481.01.T01:CDS
CATTATGCCGTGGGATGTGT+CGG 0.615360 8:-59831621 MsG0880045481.01.T01:CDS
AAGCTATGTCGAACAAGGCG+GGG 0.619861 8:-59835698 MsG0880045481.01.T01:CDS
AATGGAAGCTATGTCGAACA+AGG 0.634443 8:-59835703 MsG0880045481.01.T01:CDS
CAGGCATCTAATTAGCGAAG+AGG 0.636308 8:-59834585 MsG0880045481.01.T01:intron
GACACATCCGACACATCCCA+CGG 0.648484 8:+59831614 None:intergenic
GGAAGCTATGTCGAACAAGG+CGG 0.652937 8:-59835700 MsG0880045481.01.T01:CDS
AATTATTTGTTGCAGCATGG+CGG 0.698441 8:-59830949 MsG0880045481.01.T01:intron
AACAGCGAACCATTTAGCGG+CGG 0.707512 8:+59831670 None:intergenic
TACTGCTCTAGGACTCCATG+GGG 0.719707 8:+59830765 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAACGAAATATATTAATTA+GGG - Chr8:59833589-59833608 MsG0880045481.01.T01:intron 10.0%
!! ATATATTTCGTTATAAATAT+AGG + Chr8:59833583-59833602 None:intergenic 10.0%
!! TAATGAAATATATTAATTAG+CGG + Chr8:59832629-59832648 None:intergenic 10.0%
!! TATAACGAAATATATTAATT+AGG - Chr8:59833588-59833607 MsG0880045481.01.T01:intron 10.0%
!! TTTGCAAAAATAAATAAATT+AGG + Chr8:59835111-59835130 None:intergenic 10.0%
!!! ATGAATTTTTATATTTTTTG+CGG + Chr8:59833844-59833863 None:intergenic 10.0%
!!! GTATAAATAATAGTTTTTAT+AGG - Chr8:59831997-59832016 MsG0880045481.01.T01:intron 10.0%
!!! TTTTTTATAAATTTTCATCA+TGG + Chr8:59833023-59833042 None:intergenic 10.0%
!! AAATAAACCATTATAATGTA+AGG - Chr8:59835291-59835310 MsG0880045481.01.T01:intron 15.0%
!! AACAAATTTCATCTAAAAAA+AGG + Chr8:59834301-59834320 None:intergenic 15.0%
!! CAATTTCAAAAAAAATAGTA+GGG + Chr8:59831572-59831591 None:intergenic 15.0%
!! CGTAACAAAATTAATAAATA+AGG - Chr8:59834386-59834405 MsG0880045481.01.T01:intron 15.0%
!! TATAACAATAACATTAATGT+GGG + Chr8:59832412-59832431 None:intergenic 15.0%
!! TTATAACAATAACATTAATG+TGG + Chr8:59832413-59832432 None:intergenic 15.0%
!! TTGTTGAATTTGAAAATTTA+GGG - Chr8:59834935-59834954 MsG0880045481.01.T01:intron 15.0%
!! TTTGTTGAATTTGAAAATTT+AGG - Chr8:59834934-59834953 MsG0880045481.01.T01:intron 15.0%
!!! AAAATCTATTATCTTTTAGA+TGG - Chr8:59832500-59832519 MsG0880045481.01.T01:intron 15.0%
!!! AAAATTTTCAATAACTACTT+TGG - Chr8:59833691-59833710 MsG0880045481.01.T01:intron 15.0%
!!! AAAGTTGTTTTTTCTTAAAT+TGG - Chr8:59832992-59833011 MsG0880045481.01.T01:intron 15.0%
!!! AAATCTATTATCTTTTAGAT+GGG - Chr8:59832501-59832520 MsG0880045481.01.T01:intron 15.0%
!!! AAGTAGTTATTGAAAATTTT+AGG + Chr8:59833691-59833710 None:intergenic 15.0%
!!! AAGTCAAAAATGTTATTTTA+AGG - Chr8:59831736-59831755 MsG0880045481.01.T01:CDS 15.0%
!!! AATTTTGTCTAAAATTTAAG+AGG + Chr8:59832698-59832717 None:intergenic 15.0%
!!! AGTAGTTATTGAAAATTTTA+GGG + Chr8:59833690-59833709 None:intergenic 15.0%
!!! AGTCAAAAATGTTATTTTAA+GGG - Chr8:59831737-59831756 MsG0880045481.01.T01:CDS 15.0%
!!! ATTTTGTCTAAAATTTAAGA+GGG + Chr8:59832697-59832716 None:intergenic 15.0%
!!! GTTGAATTAATTTGAAATTT+GGG + Chr8:59833050-59833069 None:intergenic 15.0%
!!! TAAAAAACTCCAATTTTTTT+GGG - Chr8:59834130-59834149 MsG0880045481.01.T01:intron 15.0%
!!! TAAAAGAAGTATAAAATAGA+AGG - Chr8:59834195-59834214 MsG0880045481.01.T01:intron 15.0%
!!! TGTTGAATTAATTTGAAATT+TGG + Chr8:59833051-59833070 None:intergenic 15.0%
!!! TTAAAAAACTCCAATTTTTT+TGG - Chr8:59834129-59834148 MsG0880045481.01.T01:intron 15.0%
!!! TTGAATTAATTTGAAATTTG+GGG + Chr8:59833049-59833068 None:intergenic 15.0%
!!! TTTATTGTTTATGATTTTAC+AGG - Chr8:59834958-59834977 MsG0880045481.01.T01:intron 15.0%
!!! TTTTTTAGATGAAATTTGTT+AGG - Chr8:59834301-59834320 MsG0880045481.01.T01:intron 15.0%
!! AAAATGTATGTAACTTGATT+TGG - Chr8:59832089-59832108 MsG0880045481.01.T01:intron 20.0%
!! AAATCAAAGAAAATAGAACA+AGG - Chr8:59834488-59834507 MsG0880045481.01.T01:intron 20.0%
!! AACCATTAAATGAAAATACA+CGG + Chr8:59833496-59833515 None:intergenic 20.0%
!! ACCATTAAATGAAAAATACA+CGG - Chr8:59832856-59832875 MsG0880045481.01.T01:intron 20.0%
!! ATAACATAAATTTACCTAGT+TGG + Chr8:59833926-59833945 None:intergenic 20.0%
!! GATAATCAAATCAAAATACT+GGG + Chr8:59835457-59835476 None:intergenic 20.0%
!! GCAATTTCAAAAAAAATAGT+AGG + Chr8:59831573-59831592 None:intergenic 20.0%
!! GTAAATTTATGTTATGATAC+TGG - Chr8:59833931-59833950 MsG0880045481.01.T01:intron 20.0%
!! TACATCATATATGTTTGTTT+AGG + Chr8:59835409-59835428 None:intergenic 20.0%
!! TGATAATCAAATCAAAATAC+TGG + Chr8:59835458-59835477 None:intergenic 20.0%
!! TTGCTTAAATTCATGTTATA+AGG - Chr8:59832435-59832454 MsG0880045481.01.T01:intron 20.0%
!!! AAAAACAGTTTTTTGTTATG+AGG + Chr8:59832230-59832249 None:intergenic 20.0%
!!! AAAGTGAAGAAAAATTTTAG+AGG + Chr8:59833663-59833682 None:intergenic 20.0%
!!! AAGTGAAGAAAAATTTTAGA+GGG + Chr8:59833662-59833681 None:intergenic 20.0%
!!! AATAGTTTTTATAGGAAAAC+AGG - Chr8:59832005-59832024 MsG0880045481.01.T01:intron 20.0%
!!! ATAGTTTTTATAGGAAAACA+GGG - Chr8:59832006-59832025 MsG0880045481.01.T01:intron 20.0%
!!! ATTTTTGACTTAGAAATATG+AGG + Chr8:59831727-59831746 None:intergenic 20.0%
!!! GTCAAAAATGTTATTTTAAG+GGG - Chr8:59831738-59831757 MsG0880045481.01.T01:CDS 20.0%
!!! TTTATAAATTTTCATCATGG+AGG + Chr8:59833020-59833039 None:intergenic 20.0%
!!! TTTTCATTGTTATTTGGTAT+GGG - Chr8:59835563-59835582 MsG0880045481.01.T01:intron 20.0%
!!! TTTTTGACTTAGAAATATGA+GGG + Chr8:59831726-59831745 None:intergenic 20.0%
!!! TTTTTTTGAAATTGCAAAGT+GGG - Chr8:59831578-59831597 MsG0880045481.01.T01:intron 20.0%
!!! TTTTTTTTGAAATTGCAAAG+TGG - Chr8:59831577-59831596 MsG0880045481.01.T01:intron 20.0%
! AATCTACTAAAACAAATGAG+CGG - Chr8:59834335-59834354 MsG0880045481.01.T01:intron 25.0%
! AATGAATTTGAGTCAATGAT+TGG + Chr8:59834025-59834044 None:intergenic 25.0%
! AATGCACCTAAGATAAAATA+AGG + Chr8:59831776-59831795 None:intergenic 25.0%
! AATTGGAATACAATTTGCAA+TGG - Chr8:59835598-59835617 MsG0880045481.01.T01:intron 25.0%
! ACCAAATAACAATGAAAACA+TGG + Chr8:59835561-59835580 None:intergenic 25.0%
! ATGATCAAATTAGAAATCGT+AGG + Chr8:59832310-59832329 None:intergenic 25.0%
! ATGGTATCTAATCATATAGA+TGG - Chr8:59833887-59833906 MsG0880045481.01.T01:intron 25.0%
! ATTGCATTTGAATATAAAGG+TGG + Chr8:59832119-59832138 None:intergenic 25.0%
! CGTGAATAAACATAAAGAAA+AGG - Chr8:59833992-59834011 MsG0880045481.01.T01:intron 25.0%
! GACCAATAACATACATAAAA+TGG + Chr8:59835364-59835383 None:intergenic 25.0%
! TAGAAAATGGTTTCAATCTT+TGG - Chr8:59834724-59834743 MsG0880045481.01.T01:intron 25.0%
! TCAAATTAATTCAACACTTG+TGG - Chr8:59833055-59833074 MsG0880045481.01.T01:intron 25.0%
! TGAATAAGGTTAAAATTCCT+AGG - Chr8:59830892-59830911 MsG0880045481.01.T01:CDS 25.0%
! TGATTAGATACCATATGAAT+AGG + Chr8:59833881-59833900 None:intergenic 25.0%
! TGCATTGCATTTGAATATAA+AGG + Chr8:59832122-59832141 None:intergenic 25.0%
! TGTAACACCTTACATTATAA+TGG + Chr8:59835301-59835320 None:intergenic 25.0%
!! AACCGTGTATTTTCATTTAA+TGG - Chr8:59833491-59833510 MsG0880045481.01.T01:intron 25.0%
!! ACCGTGTATTTTTCATTTAA+TGG + Chr8:59832860-59832879 None:intergenic 25.0%
!! ATGGTATATTTTCATGCTTT+AGG - Chr8:59835225-59835244 MsG0880045481.01.T01:intron 25.0%
!! CACCATTTTATGTATGTTAT+TGG - Chr8:59835359-59835378 MsG0880045481.01.T01:intron 25.0%
!! TAACTTCTTTTATGAATCAG+AGG + Chr8:59831007-59831026 None:intergenic 25.0%
!! TTATGAATCAGAGGATTTTT+AGG + Chr8:59830998-59831017 None:intergenic 25.0%
!!! AAATATACCATCTTTTGAGA+TGG + Chr8:59835216-59835235 None:intergenic 25.0%
!!! AATATACCATCTTTTGAGAT+GGG + Chr8:59835215-59835234 None:intergenic 25.0%
!!! AGTCTTGTAAAAGTTTTTGA+AGG - Chr8:59831295-59831314 MsG0880045481.01.T01:intron 25.0%
!!! CGAAAAGTTGGTATATTTAT+AGG + Chr8:59833632-59833651 None:intergenic 25.0%
!!! GTATTCGTTGTGTTTTTAAA+AGG - Chr8:59835042-59835061 MsG0880045481.01.T01:intron 25.0%
!!! GTTTTCATTGTTATTTGGTA+TGG - Chr8:59835562-59835581 MsG0880045481.01.T01:intron 25.0%
!!! TTCCATTTTTAAGCTTGAAA+CGG - Chr8:59831254-59831273 MsG0880045481.01.T01:intron 25.0%
!!! TTTTTTGAAATTGCAAAGTG+GGG - Chr8:59831579-59831598 MsG0880045481.01.T01:intron 25.0%
AAAATAGAACAAGGAAAGCA+AGG - Chr8:59834497-59834516 MsG0880045481.01.T01:intron 30.0%
AACAACTTCTATTTGTGTGT+TGG + Chr8:59833176-59833195 None:intergenic 30.0%
AACAATAACATTAATGTGGG+TGG + Chr8:59832409-59832428 None:intergenic 30.0%
AATTGTATTCCAATTGAGAC+TGG + Chr8:59835593-59835612 None:intergenic 30.0%
ACACACAAATAGAAGTTGTT+TGG - Chr8:59833176-59833195 MsG0880045481.01.T01:intron 30.0%
ACGCTTTGACCTATTTAAAA+TGG + Chr8:59830956-59830975 None:intergenic 30.0%
AGAATCTCTCCCAAAAAAAT+TGG + Chr8:59834142-59834161 None:intergenic 30.0%
AGCGAATCAATTGAAAGAAA+TGG - Chr8:59833357-59833376 MsG0880045481.01.T01:intron 30.0%
ATAAATATAGGCTAGATACG+AGG + Chr8:59833571-59833590 None:intergenic 30.0%
CAAAAAAAAAGCAAGCGTAT+AGG - Chr8:59834256-59834275 MsG0880045481.01.T01:intron 30.0%
CAAATGAGCGGAAAAAAATT+AGG - Chr8:59834347-59834366 MsG0880045481.01.T01:intron 30.0%
CATTCTCATAATAACATCCT+CGG + Chr8:59832802-59832821 None:intergenic 30.0%
CTTAAAAATGGAATCTCTAG+TGG + Chr8:59831247-59831266 None:intergenic 30.0%
GAAGAACAACATGATTAACA+TGG - Chr8:59833332-59833351 MsG0880045481.01.T01:intron 30.0%
GAATCAATTGAAAGAAATGG+TGG - Chr8:59833360-59833379 MsG0880045481.01.T01:intron 30.0%
GTTATTGTGAAAGACTAGAT+TGG + Chr8:59834099-59834118 None:intergenic 30.0%
TAAACCTTATAGCACTAGTT+GGG + Chr8:59835333-59835352 None:intergenic 30.0%
TAATGTCTTCTAGTCTCTTT+GGG - Chr8:59831072-59831091 MsG0880045481.01.T01:intron 30.0%
TTACCTAACAATCCTTGTAT+CGG - Chr8:59832601-59832620 MsG0880045481.01.T01:intron 30.0%
TTATAAGGATGACTTCTATC+TGG - Chr8:59832450-59832469 MsG0880045481.01.T01:intron 30.0%
! ATGGTTTATTTGACCCTTTT+AGG + Chr8:59835282-59835301 None:intergenic 30.0%
! ATGTTATTGGTCTGTATGAT+TGG - Chr8:59835372-59835391 MsG0880045481.01.T01:intron 30.0%
! CCTATTTAAAATGGGTAAGA+AGG + Chr8:59830947-59830966 None:intergenic 30.0%
! CCTTCTTACCCATTTTAAAT+AGG - Chr8:59830944-59830963 MsG0880045481.01.T01:intron 30.0%
! CGCTTTGACCTATTTAAAAT+GGG + Chr8:59830955-59830974 None:intergenic 30.0%
! CTTAGAGAATTTTGCAGTTT+TGG + Chr8:59831817-59831836 None:intergenic 30.0%
! GAAAACATTCATGCATTTTC+TGG - Chr8:59832264-59832283 MsG0880045481.01.T01:intron 30.0%
! GAGTTTGAATTTGTTCGATT+GGG + Chr8:59834562-59834581 None:intergenic 30.0%
! TACAATTATTTGTTGCAGCA+TGG - Chr8:59835514-59835533 MsG0880045481.01.T01:intron 30.0%
! TTGTCTAAAATTTAAGAGGG+AGG + Chr8:59832694-59832713 None:intergenic 30.0%
! TTTCTTTGATTTCAACTCAG+CGG + Chr8:59834480-59834499 None:intergenic 30.0%
! TTTTCCAACTTGAGCTTTTT+GGG - Chr8:59830915-59830934 MsG0880045481.01.T01:CDS 30.0%
! TTTTGTATTCATTATGCCGT+GGG - Chr8:59834836-59834855 MsG0880045481.01.T01:intron 30.0%
! TTTTTATAGGAAAACAGGGT+CGG - Chr8:59832010-59832029 MsG0880045481.01.T01:intron 30.0%
! TTTTTGAATGTGGTGTTTAC+CGG + Chr8:59832375-59832394 None:intergenic 30.0%
!! GCCATGTTTTCATTGTTATT+TGG - Chr8:59835557-59835576 MsG0880045481.01.T01:intron 30.0%
!! TATTTTAAGGGGCAATTTGT+TGG - Chr8:59831749-59831768 MsG0880045481.01.T01:intron 30.0%
!! TCCATTTTTAAGCTTGAAAC+GGG - Chr8:59831255-59831274 MsG0880045481.01.T01:intron 30.0%
!! TGTGTTTTTAAAAGGTTGAG+AGG - Chr8:59835050-59835069 MsG0880045481.01.T01:intron 30.0%
!! TTTTAAAAGGTTGAGAGGAA+AGG - Chr8:59835055-59835074 MsG0880045481.01.T01:intron 30.0%
!!! GTTGGACCTTATTTTATCTT+AGG - Chr8:59831767-59831786 MsG0880045481.01.T01:intron 30.0%
AAAAGTTACGGTCACATACA+AGG + Chr8:59832574-59832593 None:intergenic 35.0%
AAATAGGTCAAAGCGTGAAT+AGG - Chr8:59830960-59830979 MsG0880045481.01.T01:intron 35.0%
AACACAGCTAAATCTTGATG+AGG + Chr8:59832955-59832974 None:intergenic 35.0%
AAGGAATGATGAGAAGAACA+AGG - Chr8:59833401-59833420 MsG0880045481.01.T01:intron 35.0%
AAGGATTCAAAAGCAAGCTA+AGG + Chr8:59832555-59832574 None:intergenic 35.0%
AATTATCTTGTAGTACCCCA+TGG - Chr8:59835686-59835705 MsG0880045481.01.T01:intron 35.0%
AATTCTCGAGCCTATTCATA+TGG - Chr8:59833868-59833887 MsG0880045481.01.T01:intron 35.0%
ACACAGCTAAATCTTGATGA+GGG + Chr8:59832954-59832973 None:intergenic 35.0%
ACCCGTTTCAAGCTTAAAAA+TGG + Chr8:59831259-59831278 None:intergenic 35.0%
ACCTAAATTGGATGCTGAAA+AGG + Chr8:59831202-59831221 None:intergenic 35.0%
AGAAATATGAGGGAGAGAAA+TGG + Chr8:59831716-59831735 None:intergenic 35.0%
AGGATTCAAAAGCAAGCTAA+GGG + Chr8:59832554-59832573 None:intergenic 35.0%
AGTTTCTAATGTCCAGGATA+TGG - Chr8:59831906-59831925 MsG0880045481.01.T01:intron 35.0%
ATGCTGAAAAGGCAAAAATC+TGG + Chr8:59831191-59831210 None:intergenic 35.0%
CAAGCGTATAGGAATGAAAT+TGG - Chr8:59834267-59834286 MsG0880045481.01.T01:intron 35.0%
CACGGCATAATGAATACAAA+AGG + Chr8:59834837-59834856 None:intergenic 35.0%
CAGTTGACTGAAATTGACTA+GGG + Chr8:59834420-59834439 None:intergenic 35.0%
CCAGTCTTACAAAGTGAATA+AGG - Chr8:59830878-59830897 MsG0880045481.01.T01:CDS 35.0%
CCTTATTCACTTTGTAAGAC+TGG + Chr8:59830881-59830900 None:intergenic 35.0%
CGCTACAAACAGTTAGAAAA+TGG - Chr8:59834711-59834730 MsG0880045481.01.T01:intron 35.0%
CTAAACCTTATAGCACTAGT+TGG + Chr8:59835334-59835353 None:intergenic 35.0%
GAAAGGAAGATGTTCTATCT+AGG - Chr8:59835072-59835091 MsG0880045481.01.T01:intron 35.0%
GAATAAGAGAGACTAGTGAT+CGG + Chr8:59832726-59832745 None:intergenic 35.0%
GAATTTGAATTCGCTCAACT+GGG + Chr8:59834681-59834700 None:intergenic 35.0%
GATACAAGGATTGTTAGGTA+AGG + Chr8:59832602-59832621 None:intergenic 35.0%
GATCCATATATCAGTGGAAA+GGG - Chr8:59833308-59833327 MsG0880045481.01.T01:intron 35.0%
GCTGTGTTCTTCATAAACAA+AGG - Chr8:59832967-59832986 MsG0880045481.01.T01:intron 35.0%
GGGATCTATTTAGTCTCTTT+GGG - Chr8:59831092-59831111 MsG0880045481.01.T01:intron 35.0%
GGTAAGGCTCAAAAAAGTTA+CGG + Chr8:59832586-59832605 None:intergenic 35.0%
GTAATGTCTTCTAGTCTCTT+TGG - Chr8:59831071-59831090 MsG0880045481.01.T01:intron 35.0%
GTTTCTAATGTCCAGGATAT+GGG - Chr8:59831907-59831926 MsG0880045481.01.T01:intron 35.0%
TAAGTGGTTAAGAACTCCAA+AGG + Chr8:59831461-59831480 None:intergenic 35.0%
TATGATACTGGCGTAAATTC+AGG - Chr8:59833943-59833962 MsG0880045481.01.T01:intron 35.0%
TATGGGAGACAAATACTTTC+TGG - Chr8:59831924-59831943 MsG0880045481.01.T01:intron 35.0%
TCAGTTGACTGAAATTGACT+AGG + Chr8:59834421-59834440 None:intergenic 35.0%
TGAATTTGAATTCGCTCAAC+TGG + Chr8:59834682-59834701 None:intergenic 35.0%
TGATGAGGGAAAATTTCGAA+GGG + Chr8:59832940-59832959 None:intergenic 35.0%
TGGGATCTATTTAGTCTCTT+TGG - Chr8:59831091-59831110 MsG0880045481.01.T01:intron 35.0%
TTCGAAATGGTTTCAAGCTT+TGG - Chr8:59834593-59834612 MsG0880045481.01.T01:CDS 35.0%
TTCTCTAAGTCCATGATTAG+AGG - Chr8:59831828-59831847 MsG0880045481.01.T01:intron 35.0%
TTGATGAGGGAAAATTTCGA+AGG + Chr8:59832941-59832960 None:intergenic 35.0%
TTGTGTGTTGGATGTGAATT+GGG + Chr8:59833164-59833183 None:intergenic 35.0%
TTTGTGTGTTGGATGTGAAT+TGG + Chr8:59833165-59833184 None:intergenic 35.0%
! AATTATTTGTTGCAGCATGG+CGG - Chr8:59835517-59835536 MsG0880045481.01.T01:intron 35.0%
! AGTCTCTTTGGGAATTTGAA+TGG - Chr8:59831103-59831122 MsG0880045481.01.T01:intron 35.0%
! CGAGTTTGAATTTGTTCGAT+TGG + Chr8:59834563-59834582 None:intergenic 35.0%
! CTGTTGTTTACCAAAAACAC+CGG - Chr8:59832353-59832372 MsG0880045481.01.T01:intron 35.0%
! CTTTTGTATTCATTATGCCG+TGG - Chr8:59834835-59834854 MsG0880045481.01.T01:intron 35.0%
! GTTTTCCAACTTGAGCTTTT+TGG - Chr8:59830914-59830933 MsG0880045481.01.T01:CDS 35.0%
!! AAGTTTTTGAGGGGTAACAA+TGG - Chr8:59831336-59831355 MsG0880045481.01.T01:intron 35.0%
!! AGTTTTAGTGGGATCATGAA+GGG - Chr8:59831507-59831526 MsG0880045481.01.T01:intron 35.0%
!! CATTGTTATTTGGTATGGGT+GGG - Chr8:59835567-59835586 MsG0880045481.01.T01:intron 35.0%
!! CTATGACGAAAACTTGTTGT+TGG + Chr8:59830853-59830872 None:intergenic 35.0%
!! GGGGTACTACAAGATAATTT+TGG + Chr8:59835685-59835704 None:intergenic 35.0%
!! GTTAGTGTTGATATCCAACT+AGG - Chr8:59833909-59833928 MsG0880045481.01.T01:intron 35.0%
!! TAACAATGGAGGTACTGTTT+AGG - Chr8:59831350-59831369 MsG0880045481.01.T01:intron 35.0%
!! TCATTGTTATTTGGTATGGG+TGG - Chr8:59835566-59835585 MsG0880045481.01.T01:intron 35.0%
!! TGTTGGTTGCTATGCATTTT+TGG + Chr8:59830836-59830855 None:intergenic 35.0%
!! TTGAAAGAAATGGTGGATCA+AGG - Chr8:59833367-59833386 MsG0880045481.01.T01:intron 35.0%
!!! ATTGGGTTTTGAAGTTGTTG+TGG + Chr8:59834545-59834564 None:intergenic 35.0%
AATTTCGAAGGGAGAGAAGA+AGG + Chr8:59832929-59832948 None:intergenic 40.0%
AATTTGCAATGGCTCAAGCT+GGG - Chr8:59835609-59835628 MsG0880045481.01.T01:intron 40.0%
ACACCACATTCAAAAACACC+TGG - Chr8:59832379-59832398 MsG0880045481.01.T01:intron 40.0%
ACTAGACAGGATTGCCTAAA+AGG - Chr8:59835265-59835284 MsG0880045481.01.T01:intron 40.0%
AGAGAAGAAGGGTGAGAATT+GGG + Chr8:59832917-59832936 None:intergenic 40.0%
AGGCAAAAATCTGGCAATCT+CGG + Chr8:59831182-59831201 None:intergenic 40.0%
AGTATTTGTCTCCCATATCC+TGG + Chr8:59831921-59831940 None:intergenic 40.0%
ATTAGATGCCTGTCGAATTG+TGG + Chr8:59831873-59831892 None:intergenic 40.0%
ATTTCGAAGGGAGAGAAGAA+GGG + Chr8:59832928-59832947 None:intergenic 40.0%
CCTTTATAAAGCCAAGAGAG+AGG - Chr8:59831431-59831450 MsG0880045481.01.T01:CDS 40.0%
CTAGACAGGATTGCCTAAAA+GGG - Chr8:59835266-59835285 MsG0880045481.01.T01:intron 40.0%
GAGGGACTAAAACGAAAAGT+TGG + Chr8:59833644-59833663 None:intergenic 40.0%
GATCAAGGTTGCTACATCAA+AGG - Chr8:59833382-59833401 MsG0880045481.01.T01:intron 40.0%
GATTTGTAACGCACACAAAG+AGG - Chr8:59833223-59833242 MsG0880045481.01.T01:intron 40.0%
GGATCCATATATCAGTGGAA+AGG - Chr8:59833307-59833326 MsG0880045481.01.T01:intron 40.0%
GTAAGTAATGTATCTAGCCG+AGG - Chr8:59832782-59832801 MsG0880045481.01.T01:intron 40.0%
TACACCATGCAACTCAAATG+TGG + Chr8:59830803-59830822 None:intergenic 40.0%
TACATCCTTTGATTCCTGCT+CGG - Chr8:59834989-59835008 MsG0880045481.01.T01:intron 40.0%
TACTTGGGTGACATAGAGTT+GGG - Chr8:59833435-59833454 MsG0880045481.01.T01:intron 40.0%
TCAAAGCGTGAATAGGTGAA+GGG - Chr8:59830967-59830986 MsG0880045481.01.T01:intron 40.0%
TCACCCTTTCCACTGATATA+TGG + Chr8:59833314-59833333 None:intergenic 40.0%
TCGCTACAAACACTTCGAAA+TGG - Chr8:59834580-59834599 MsG0880045481.01.T01:intron 40.0%
TGCATTCGACAGGTAAAAGA+AGG - Chr8:59831790-59831809 MsG0880045481.01.T01:intron 40.0%
TTATCTTAGGTGCATTCGAC+AGG - Chr8:59831780-59831799 MsG0880045481.01.T01:intron 40.0%
TTCAAAAGCAAGCTAAGGGA+AGG + Chr8:59832550-59832569 None:intergenic 40.0%
! AAACCTAGGATCTTTTCGAC+TGG + Chr8:59831035-59831054 None:intergenic 40.0%
! AAATGGTTTCAAGCTTTGGC+TGG - Chr8:59834597-59834616 MsG0880045481.01.T01:CDS 40.0%
! AACCTAGGATCTTTTCGACT+GGG + Chr8:59831034-59831053 None:intergenic 40.0%
! AGACAAATACTTTCTGGTCG+AGG - Chr8:59831930-59831949 MsG0880045481.01.T01:intron 40.0%
! AGCTCGTTTCGAAGTTTTTG+AGG - Chr8:59831325-59831344 MsG0880045481.01.T01:intron 40.0%
! CAGCATCCAATTTAGGTTCT+GGG - Chr8:59831205-59831224 MsG0880045481.01.T01:intron 40.0%
! GAGAGAAAGTTTTCGAAGAG+TGG - Chr8:59831389-59831408 MsG0880045481.01.T01:intron 40.0%
! GCCTTTTCAGCATCCAATTT+AGG - Chr8:59831198-59831217 MsG0880045481.01.T01:intron 40.0%
! GCTCGTTTCGAAGTTTTTGA+GGG - Chr8:59831326-59831345 MsG0880045481.01.T01:intron 40.0%
! TCAGCATCCAATTTAGGTTC+TGG - Chr8:59831204-59831223 MsG0880045481.01.T01:intron 40.0%
! TCCTGTCTAGTCTTTACGTT+TGG + Chr8:59835256-59835275 None:intergenic 40.0%
!! AAGCTCAAGTTGGAAAACCT+AGG + Chr8:59830912-59830931 None:intergenic 40.0%
!! AAGTTTTCGAAGAGTGGACT+TGG - Chr8:59831395-59831414 MsG0880045481.01.T01:CDS 40.0%
!! AGTTTTCGAAGAGTGGACTT+GGG - Chr8:59831396-59831415 MsG0880045481.01.T01:CDS 40.0%
!! CCTCTCTCTTGGCTTTATAA+AGG + Chr8:59831434-59831453 None:intergenic 40.0%
!! CTCGTTTCGAAGTTTTTGAG+GGG - Chr8:59831327-59831346 MsG0880045481.01.T01:intron 40.0%
!! GAGGTTAGTTTCTAATGTCC+AGG - Chr8:59831900-59831919 MsG0880045481.01.T01:intron 40.0%
!! GAGTTTTAGTGGGATCATGA+AGG - Chr8:59831506-59831525 MsG0880045481.01.T01:intron 40.0%
!! GGTTGCTATGCATTTTTGGA+AGG + Chr8:59830832-59830851 None:intergenic 40.0%
!! GTACCAGGTGTTTTTGAATG+TGG + Chr8:59832385-59832404 None:intergenic 40.0%
!! TCGAGATGCTGAGTTTTAGT+GGG - Chr8:59831496-59831515 MsG0880045481.01.T01:intron 40.0%
!! TTTTTGAGGGGTAACAATGG+AGG - Chr8:59831339-59831358 MsG0880045481.01.T01:intron 40.0%
!!! ATACCATCTTTTGAGATGGG+TGG + Chr8:59835212-59835231 None:intergenic 40.0%
!!! CGGTGTTTTTGGTAAACAAC+AGG + Chr8:59832355-59832374 None:intergenic 40.0%
!!! TCCTAGGTTTTAGTTCTTCG+TGG - Chr8:59831045-59831064 MsG0880045481.01.T01:intron 40.0%
AAACATGACTCCTGCTCATC+AGG - Chr8:59834881-59834900 MsG0880045481.01.T01:intron 45.0%
AAGGCTGAGGGATAGTACTT+GGG - Chr8:59833420-59833439 MsG0880045481.01.T01:intron 45.0%
ACAAGGAAAGCAAGGAGCAA+AGG - Chr8:59834505-59834524 MsG0880045481.01.T01:intron 45.0%
ACATTCCACTCAGTGGGATT+CGG + Chr8:59834053-59834072 None:intergenic 45.0%
ACCAACAGCGAACCATTTAG+CGG + Chr8:59834802-59834821 None:intergenic 45.0%
ACCACTTAAAAGCTGCTTCG+TGG - Chr8:59831473-59831492 MsG0880045481.01.T01:CDS 45.0%
AGATTCCGAGCAGGAATCAA+AGG + Chr8:59834997-59835016 None:intergenic 45.0%
AGCACTACCTACGCTTTCTT+AGG + Chr8:59831135-59831154 None:intergenic 45.0%
AGCGTAGGTAGTGCTAGAAA+TGG - Chr8:59831140-59831159 MsG0880045481.01.T01:intron 45.0%
AGCTTGAAACGGGTGATTGA+TGG - Chr8:59831265-59831284 MsG0880045481.01.T01:intron 45.0%
AGTCCATGATTAGAGGTTGC+TGG - Chr8:59831835-59831854 MsG0880045481.01.T01:intron 45.0%
ATCCCAGCAACCTCTAATCA+TGG + Chr8:59831841-59831860 None:intergenic 45.0%
ATCCCCAGAATTTGCAGATC+TGG + Chr8:59833291-59833310 None:intergenic 45.0%
ATTAATGTGGGTGGTGTACC+AGG + Chr8:59832400-59832419 None:intergenic 45.0%
CAAAGCGTGAATAGGTGAAG+GGG - Chr8:59830968-59830987 MsG0880045481.01.T01:intron 45.0%
CAAGGAGCAACGATGTTGAA+AGG - Chr8:59834515-59834534 MsG0880045481.01.T01:intron 45.0%
CAATTTGCAATGGCTCAAGC+TGG - Chr8:59835608-59835627 MsG0880045481.01.T01:intron 45.0%
CAGCGGTGAAAAGTTGGATT+AGG + Chr8:59834463-59834482 None:intergenic 45.0%
CAGGCATCTAATTAGCGAAG+AGG - Chr8:59831881-59831900 MsG0880045481.01.T01:intron 45.0%
CATGCCCAACTAGTGCTATA+AGG - Chr8:59835326-59835345 MsG0880045481.01.T01:intron 45.0%
GAAGCCCAAAAAGCTCAAGT+TGG + Chr8:59830922-59830941 None:intergenic 45.0%
GACATAAGCCACAATTCGAC+AGG - Chr8:59831862-59831881 MsG0880045481.01.T01:intron 45.0%
GAGAGAAGAAGGGTGAGAAT+TGG + Chr8:59832918-59832937 None:intergenic 45.0%
GAGCCGATACAAGGATTGTT+AGG + Chr8:59832607-59832626 None:intergenic 45.0%
GATGAGAAGAACAAGGCTGA+GGG - Chr8:59833408-59833427 MsG0880045481.01.T01:intron 45.0%
GCACTACCTACGCTTTCTTA+GGG + Chr8:59831134-59831153 None:intergenic 45.0%
GCCAAACGTAAAGACTAGAC+AGG - Chr8:59835252-59835271 MsG0880045481.01.T01:intron 45.0%
GCCACGAAGAACTAAAACCT+AGG + Chr8:59831049-59831068 None:intergenic 45.0%
GGCAAAAATCTGGCAATCTC+GGG + Chr8:59831181-59831200 None:intergenic 45.0%
GGGTCTCGAATTTCTTCTTG+CGG + Chr8:59834661-59834680 None:intergenic 45.0%
GTAACGCACACAAAGAGGAT+TGG - Chr8:59833228-59833247 MsG0880045481.01.T01:intron 45.0%
GTACTTGGGTGACATAGAGT+TGG - Chr8:59833434-59833453 MsG0880045481.01.T01:intron 45.0%
GTCAAAGCGTGAATAGGTGA+AGG - Chr8:59830966-59830985 MsG0880045481.01.T01:intron 45.0%
GTCCATGATTAGAGGTTGCT+GGG - Chr8:59831836-59831855 MsG0880045481.01.T01:intron 45.0%
GTGCCAGATCTGCAAATTCT+GGG - Chr8:59833285-59833304 MsG0880045481.01.T01:intron 45.0%
TAATTAGCGGAGCCGATACA+AGG + Chr8:59832616-59832635 None:intergenic 45.0%
TAGGGTCTTTCTATTGCCCT+GGG + Chr8:59831554-59831573 None:intergenic 45.0%
TCAACTCAGCGGTGAAAAGT+TGG + Chr8:59834469-59834488 None:intergenic 45.0%
TCGCTTAACTGCGCAACTTT+CGG + Chr8:59831615-59831634 None:intergenic 45.0%
TCTGGGGATCCATATATCAG+TGG - Chr8:59833302-59833321 MsG0880045481.01.T01:intron 45.0%
TGATGAGAAGAACAAGGCTG+AGG - Chr8:59833407-59833426 MsG0880045481.01.T01:intron 45.0%
TGCCAGATCTGCAAATTCTG+GGG - Chr8:59833286-59833305 MsG0880045481.01.T01:intron 45.0%
TTCACGCCCAGAACCTAAAT+TGG + Chr8:59831214-59831233 None:intergenic 45.0%
! ACCACGAAGCAGCTTTTAAG+TGG + Chr8:59831477-59831496 None:intergenic 45.0%
! GAATGACCCTAAGAAAGCGT+AGG - Chr8:59831125-59831144 MsG0880045481.01.T01:intron 45.0%
! GTGGTGTTTACCGGTGTTTT+TGG + Chr8:59832366-59832385 None:intergenic 45.0%
! TGACTCTTTTCTCTAGACGC+TGG + Chr8:59832068-59832087 None:intergenic 45.0%
! TTCAAGCTTTGGCTGGAACA+AGG - Chr8:59834604-59834623 MsG0880045481.01.T01:CDS 45.0%
!! CATGCCACATTTGAGTTGCA+TGG - Chr8:59830796-59830815 MsG0880045481.01.T01:CDS 45.0%
!! GTCGAGATGCTGAGTTTTAG+TGG - Chr8:59831495-59831514 MsG0880045481.01.T01:intron 45.0%
!! GTGGAATGTGGAGGTACTTA+TGG - Chr8:59834064-59834083 MsG0880045481.01.T01:intron 45.0%
!! GTTTTCGAAGAGTGGACTTG+GGG - Chr8:59831397-59831416 MsG0880045481.01.T01:CDS 45.0%
!! TGGAGGTACTTATGGCAGAA+CGG - Chr8:59834072-59834091 MsG0880045481.01.T01:intron 45.0%
!!! TAAAAAATTCTAATTTTTTT+GGG + Chr8:59833791-59833810 None:intergenic 5.0%
!!! TTAAAAAATTCTAATTTTTT+TGG + Chr8:59833792-59833811 None:intergenic 5.0%
AACAGCGAACCATTTAGCGG+CGG + Chr8:59834799-59834818 None:intergenic 50.0%
AAGCTATGTCGAACAAGGCG+GGG - Chr8:59830768-59830787 MsG0880045481.01.T01:CDS 50.0%
AAGGGTCTGAAGGTGACACT+TGG - Chr8:59831525-59831544 MsG0880045481.01.T01:intron 50.0%
ACCTCCACATTCCACTCAGT+GGG + Chr8:59834059-59834078 None:intergenic 50.0%
AGGGTCTTTCTATTGCCCTG+GGG + Chr8:59831553-59831572 None:intergenic 50.0%
CAAGGCTGAGGGATAGTACT+TGG - Chr8:59833419-59833438 MsG0880045481.01.T01:intron 50.0%
CATTATGCCGTGGGATGTGT+CGG - Chr8:59834845-59834864 MsG0880045481.01.T01:intron 50.0%
CCAAAGGTTCTCCTCTCTCT+TGG + Chr8:59831445-59831464 None:intergenic 50.0%
CCAAGAGAGAGGAGAACCTT+TGG - Chr8:59831442-59831461 MsG0880045481.01.T01:CDS 50.0%
CGTGCCAGATCTGCAAATTC+TGG - Chr8:59833284-59833303 MsG0880045481.01.T01:intron 50.0%
CTGCCACCCATCTCAAAAGA+TGG - Chr8:59835206-59835225 MsG0880045481.01.T01:intron 50.0%
GAAGCTATGTCGAACAAGGC+GGG - Chr8:59830767-59830786 MsG0880045481.01.T01:CDS 50.0%
GAATCCCACTGAGTGGAATG+TGG - Chr8:59834052-59834071 MsG0880045481.01.T01:intron 50.0%
GCGCAACTTTCGGACTAAGT+GGG + Chr8:59831605-59831624 None:intergenic 50.0%
GGAAGCTATGTCGAACAAGG+CGG - Chr8:59830766-59830785 MsG0880045481.01.T01:CDS 50.0%
GGCTCAAGCTGGGAATTTCA+AGG - Chr8:59835619-59835638 MsG0880045481.01.T01:intron 50.0%
GTAGGGTCTTTCTATTGCCC+TGG + Chr8:59831555-59831574 None:intergenic 50.0%
TACCTCCACATTCCACTCAG+TGG + Chr8:59834060-59834079 None:intergenic 50.0%
TGCCCAGTCGAAAAGATCCT+AGG - Chr8:59831029-59831048 MsG0880045481.01.T01:intron 50.0%
TGCGCAACTTTCGGACTAAG+TGG + Chr8:59831606-59831625 None:intergenic 50.0%
TGGCTGGAACAAGGAAAGCA+AGG - Chr8:59834613-59834632 MsG0880045481.01.T01:CDS 50.0%
TGGGATCATGAAGGGTCTGA+AGG - Chr8:59831515-59831534 MsG0880045481.01.T01:intron 50.0%
! AAGAGTGGACTTGGGGAAGA+AGG - Chr8:59831404-59831423 MsG0880045481.01.T01:CDS 50.0%
! AGAGTGGACTTGGGGAAGAA+GGG - Chr8:59831405-59831424 MsG0880045481.01.T01:CDS 50.0%
!! CTACTGCTCTAGGACTCCAT+GGG + Chr8:59835705-59835724 None:intergenic 50.0%
!! GGAGGTACTTATGGCAGAAC+GGG - Chr8:59834073-59834092 MsG0880045481.01.T01:intron 50.0%
!! TACTGCTCTAGGACTCCATG+GGG + Chr8:59835704-59835723 None:intergenic 50.0%
AAGGTGACACTTGGTTCCCC+AGG - Chr8:59831534-59831553 MsG0880045481.01.T01:intron 55.0%
AGCTATGTCGAACAAGGCGG+GGG - Chr8:59830769-59830788 MsG0880045481.01.T01:CDS 55.0%
AGGTGACACTTGGTTCCCCA+GGG - Chr8:59831535-59831554 MsG0880045481.01.T01:intron 55.0%
ATGGGTGGGCCAGTCTCAAT+TGG - Chr8:59835581-59835600 MsG0880045481.01.T01:intron 55.0%
CACAACAGCAGATTCCGAGC+AGG + Chr8:59835006-59835025 None:intergenic 55.0%
CTGCTCGGAATCTGCTGTTG+TGG - Chr8:59835004-59835023 MsG0880045481.01.T01:intron 55.0%
GAAACCCTGACCTGATGAGC+AGG + Chr8:59834894-59834913 None:intergenic 55.0%
GACACATCCGACACATCCCA+CGG + Chr8:59834855-59834874 None:intergenic 55.0%
GACTCCTGCTCATCAGGTCA+GGG - Chr8:59834887-59834906 MsG0880045481.01.T01:intron 55.0%
GCCGCTAAATGGTTCGCTGT+TGG - Chr8:59834798-59834817 MsG0880045481.01.T01:intron 55.0%
GTTGTGGCTGGAGTGAATGC+TGG - Chr8:59835020-59835039 MsG0880045481.01.T01:intron 55.0%
TCCCACTGAGTGGAATGTGG+AGG - Chr8:59834055-59834074 MsG0880045481.01.T01:intron 55.0%
TCGGAATCTGCTGTTGTGGC+TGG - Chr8:59835008-59835027 MsG0880045481.01.T01:intron 55.0%
TGACTCCTGCTCATCAGGTC+AGG - Chr8:59834886-59834905 MsG0880045481.01.T01:intron 55.0%
! ATTTGTTGCAGCATGGCGGC+AGG - Chr8:59835521-59835540 MsG0880045481.01.T01:intron 55.0%
!!! ATGGCGGCAGGTTTTGGTTC+TGG - Chr8:59835533-59835552 MsG0880045481.01.T01:intron 55.0%
!!! TGGCGGCAGGTTTTGGTTCT+GGG - Chr8:59835534-59835553 MsG0880045481.01.T01:intron 55.0%
AGCGAACCATTTAGCGGCGG+TGG + Chr8:59834796-59834815 None:intergenic 60.0%
GAACCATTTAGCGGCGGTGG+TGG + Chr8:59834793-59834812 None:intergenic 60.0%
GTCGACCGAATCCCACTGAG+TGG - Chr8:59834045-59834064 MsG0880045481.01.T01:intron 60.0%
GTGGACTTGGGGAAGAAGGG+TGG - Chr8:59831408-59831427 MsG0880045481.01.T01:CDS 60.0%
! TGCAGCATGGCGGCAGGTTT+TGG - Chr8:59835527-59835546 MsG0880045481.01.T01:intron 60.0%
!!! GGCGGCAGGTTTTGGTTCTG+GGG - Chr8:59835535-59835554 MsG0880045481.01.T01:intron 60.0%
! CCATTTAGCGGCGGTGGTGG+CGG + Chr8:59834790-59834809 None:intergenic 65.0%
CCGCCACCACCGCCGCTAAA+TGG - Chr8:59834787-59834806 MsG0880045481.01.T01:intron 70.0%
! GGTGACGGCGGCGGCTTCAA+CGG + Chr8:59834769-59834788 None:intergenic 70.0%
!! AGCGGCGGTGGTGGCGGTGA+CGG + Chr8:59834784-59834803 None:intergenic 75.0%
!!! GGCGGTGGTGGCGGTGACGG+CGG + Chr8:59834781-59834800 None:intergenic 80.0%
!!! GGTGGTGGCGGTGACGGCGG+CGG + Chr8:59834778-59834797 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 59830764 59835724 59830764 ID=MsG0880045481.01;Name=MsG0880045481.01
Chr8 mRNA 59830764 59835724 59830764 ID=MsG0880045481.01.T01;Parent=MsG0880045481.01;Name=MsG0880045481.01.T01;_AED=0.56;_eAED=0.70;_QI=0|0.25|0.2|0.6|1|1|5|0|198
Chr8 exon 59835698 59835724 59835698 ID=MsG0880045481.01.T01:exon:23046;Parent=MsG0880045481.01.T01
Chr8 exon 59834586 59834699 59834586 ID=MsG0880045481.01.T01:exon:23045;Parent=MsG0880045481.01.T01
Chr8 exon 59831617 59831765 59831617 ID=MsG0880045481.01.T01:exon:23044;Parent=MsG0880045481.01.T01
Chr8 exon 59831395 59831508 59831395 ID=MsG0880045481.01.T01:exon:23043;Parent=MsG0880045481.01.T01
Chr8 exon 59830764 59830956 59830764 ID=MsG0880045481.01.T01:exon:23042;Parent=MsG0880045481.01.T01
Chr8 CDS 59835698 59835724 59835698 ID=MsG0880045481.01.T01:cds;Parent=MsG0880045481.01.T01
Chr8 CDS 59834586 59834699 59834586 ID=MsG0880045481.01.T01:cds;Parent=MsG0880045481.01.T01
Chr8 CDS 59831617 59831765 59831617 ID=MsG0880045481.01.T01:cds;Parent=MsG0880045481.01.T01
Chr8 CDS 59831395 59831508 59831395 ID=MsG0880045481.01.T01:cds;Parent=MsG0880045481.01.T01
Chr8 CDS 59830764 59830956 59830764 ID=MsG0880045481.01.T01:cds;Parent=MsG0880045481.01.T01
Gene Sequence

>MsG0880045481.01.T01

ATGGAAGCTATGTCGAACAAGGCGGGGGTGCATTCGACAGGTAAAAGAAGGTCCAAAACTGCAAAATTCTCTAAGTCCATGATTAGAGGTTGCTGGGATCGACATAAGCCACAATTCGACAGGCATCTAATTAGCGAAGAGTTAGAAAATGGTTTCAATCTTTGGCTCTCTAAACAGTCCATCGCCGTTGAAGCCGCCGCCGTCACCGCCACCACCGCCGCTAAATGGTTCGCTGTTGGTGCTCTTGCTACTCCTTTTGTATTCATTATGCCGTGGGATGTGTCGGATGTGACTTATTCTACATCCTTTGATTCCTGCTCGGAATCTGCTGTTGTGGCTGGAGTGAATGCTGGTATTCGTTGTGTTTTTAAAAGGTTGAGAGGAAAGGAAGATGTTCTATCTAGCATGGCGGCAGGTTTTGGTTCTGGGGCCATGTTTTCATTGTTATTTGGTATGGGTGGGCCAGTCTCAATTGGAATACAATTTGCAATGGCTCAAGCTGGGAATTTCAAGGTGAGCATGAACAAAATGCATCTTTTTGACAGCTTTGTAAACCAAAATTATCTTGTAGTACCCCATGGAGTCCTAGAGCAGTAG
Protein sequence

>MsG0880045481.01.T01

MEAMSNKAGVHSTGKRRSKTAKFSKSMIRGCWDRHKPQFDRHLISEELENGFNLWLSKQSIAVEAAAVTATTAAKWFAVGALATPFVFIMPWDVSDVTYSTSFDSCSESAVVAGVNAGIRCVFKRLRGKEDVLSSMAAGFGSGAMFSLLFGMGGPVSIGIQFAMAQAGNFKVSMNKMHLFDSFVNQNYLVVPHGVLEQ*