Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045690.01.T01 | XP_003629401.2 | 87.432 | 366 | 20 | 3 | 15 | 362 | 98 | 455 | 0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045690.01.T01 | O81077 | 27.52 | 367 | 234 | 7 | 16 | 361 | 97 | 452 | 2.89E-35 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0580024975.01 | MsG0880045690.01 | 0.807961 | 3.913092e-50 | 2.209471e-47 |
| MsG0380016317.01 | MsG0880045690.01 | 0.816107 | 6.558243e-52 | 4.605253e-49 |
| MsG0680035831.01 | MsG0880045690.01 | 0.829759 | 4.299715e-55 | 4.442793e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045690.01.T01 | MTR_8g076940 | 87.432 | 366 | 20 | 3 | 15 | 362 | 98 | 455 | 0.0 | 642 |
| MsG0880045690.01.T01 | MTR_8g076940 | 89.274 | 317 | 12 | 2 | 15 | 331 | 98 | 392 | 0.0 | 572 |
| MsG0880045690.01.T01 | MTR_8g076940 | 95.862 | 290 | 4 | 1 | 15 | 304 | 98 | 379 | 0.0 | 570 |
| MsG0880045690.01.T01 | MTR_8g076940 | 95.862 | 290 | 4 | 1 | 15 | 304 | 98 | 379 | 0.0 | 569 |
| MsG0880045690.01.T01 | MTR_3g112120 | 38.947 | 380 | 182 | 9 | 14 | 361 | 92 | 453 | 2.42e-73 | 236 |
| MsG0880045690.01.T01 | MTR_6g034940 | 33.623 | 345 | 190 | 8 | 44 | 361 | 119 | 451 | 4.41e-56 | 190 |
| MsG0880045690.01.T01 | MTR_1g019410 | 28.571 | 364 | 231 | 6 | 18 | 361 | 85 | 439 | 2.73e-37 | 140 |
| MsG0880045690.01.T01 | MTR_4g086130 | 26.374 | 364 | 238 | 6 | 18 | 361 | 85 | 438 | 2.07e-36 | 137 |
| MsG0880045690.01.T01 | MTR_2g031920 | 26.121 | 379 | 237 | 10 | 13 | 361 | 92 | 457 | 8.26e-34 | 130 |
| MsG0880045690.01.T01 | MTR_5g025610 | 26.975 | 367 | 231 | 6 | 16 | 361 | 83 | 433 | 1.02e-33 | 130 |
| MsG0880045690.01.T01 | MTR_5g025610 | 26.975 | 367 | 231 | 6 | 16 | 361 | 83 | 433 | 1.25e-33 | 130 |
| MsG0880045690.01.T01 | MTR_2g031930 | 25.926 | 378 | 236 | 11 | 13 | 361 | 92 | 454 | 9.12e-33 | 127 |
| MsG0880045690.01.T01 | MTR_2g031930 | 25.926 | 378 | 236 | 11 | 13 | 361 | 96 | 458 | 1.85e-32 | 127 |
| MsG0880045690.01.T01 | MTR_8g072260 | 27.297 | 370 | 226 | 11 | 16 | 361 | 85 | 435 | 8.88e-32 | 124 |
| MsG0880045690.01.T01 | MTR_8g072260 | 27.568 | 370 | 225 | 11 | 16 | 361 | 85 | 435 | 1.07e-31 | 124 |
| MsG0880045690.01.T01 | MTR_7g033040 | 28.022 | 364 | 219 | 9 | 25 | 361 | 94 | 441 | 3.71e-31 | 123 |
| MsG0880045690.01.T01 | MTR_8g077810 | 26.667 | 375 | 226 | 10 | 23 | 362 | 92 | 452 | 1.19e-30 | 122 |
| MsG0880045690.01.T01 | MTR_4g086040 | 25.824 | 364 | 240 | 6 | 18 | 361 | 88 | 441 | 5.51e-30 | 120 |
| MsG0880045690.01.T01 | MTR_3g070380 | 27.013 | 385 | 234 | 11 | 5 | 359 | 70 | 437 | 1.17e-29 | 119 |
| MsG0880045690.01.T01 | MTR_8g016180 | 26.359 | 368 | 223 | 10 | 23 | 361 | 96 | 444 | 7.64e-29 | 117 |
| MsG0880045690.01.T01 | MTR_8g089800 | 24.538 | 379 | 243 | 11 | 13 | 361 | 94 | 459 | 1.71e-28 | 116 |
| MsG0880045690.01.T01 | MTR_8g100135 | 24.033 | 362 | 244 | 4 | 23 | 361 | 94 | 447 | 1.99e-28 | 115 |
| MsG0880045690.01.T01 | MTR_3g007320 | 25.886 | 367 | 234 | 9 | 19 | 361 | 83 | 435 | 3.58e-28 | 114 |
| MsG0880045690.01.T01 | MTR_5g082520 | 27.062 | 388 | 234 | 11 | 5 | 362 | 69 | 437 | 1.16e-27 | 113 |
| MsG0880045690.01.T01 | MTR_6g015910 | 26.575 | 365 | 234 | 9 | 19 | 361 | 83 | 435 | 1.57e-27 | 113 |
| MsG0880045690.01.T01 | MTR_8g076510 | 25.137 | 366 | 242 | 7 | 19 | 361 | 94 | 450 | 2.03e-27 | 112 |
| MsG0880045690.01.T01 | MTR_1g037580 | 23.864 | 352 | 237 | 5 | 16 | 347 | 92 | 432 | 1.10e-25 | 107 |
| MsG0880045690.01.T01 | MTR_7g016040 | 25.137 | 366 | 237 | 8 | 19 | 361 | 83 | 434 | 2.79e-25 | 106 |
| MsG0880045690.01.T01 | MTR_5g091760 | 24.242 | 396 | 240 | 13 | 5 | 361 | 73 | 447 | 4.43e-25 | 106 |
| MsG0880045690.01.T01 | MTR_6g069000 | 24.665 | 373 | 235 | 10 | 19 | 361 | 105 | 461 | 6.05e-25 | 105 |
| MsG0880045690.01.T01 | MTR_6g069000 | 24.665 | 373 | 235 | 10 | 19 | 361 | 95 | 451 | 7.19e-25 | 105 |
| MsG0880045690.01.T01 | MTR_5g020020 | 25.067 | 375 | 228 | 10 | 23 | 362 | 95 | 451 | 8.41e-25 | 105 |
| MsG0880045690.01.T01 | MTR_5g014250 | 25.065 | 383 | 247 | 10 | 7 | 361 | 90 | 460 | 9.64e-25 | 105 |
| MsG0880045690.01.T01 | MTR_0045s0060 | 23.754 | 341 | 221 | 9 | 45 | 361 | 40 | 365 | 1.53e-24 | 103 |
| MsG0880045690.01.T01 | MTR_5g092150 | 23.140 | 363 | 245 | 5 | 25 | 362 | 90 | 443 | 2.53e-24 | 103 |
| MsG0880045690.01.T01 | MTR_0045s0060 | 23.754 | 341 | 221 | 9 | 45 | 361 | 122 | 447 | 3.10e-24 | 103 |
| MsG0880045690.01.T01 | MTR_5g025610 | 26.990 | 289 | 192 | 5 | 16 | 301 | 83 | 355 | 4.22e-24 | 102 |
| MsG0880045690.01.T01 | MTR_3g467130 | 23.947 | 380 | 244 | 11 | 13 | 361 | 82 | 447 | 6.45e-24 | 102 |
| MsG0880045690.01.T01 | MTR_5g021220 | 24.937 | 397 | 245 | 11 | 6 | 361 | 77 | 461 | 5.97e-23 | 100 |
| MsG0880045690.01.T01 | MTR_8g072260 | 27.397 | 292 | 187 | 9 | 16 | 301 | 85 | 357 | 8.43e-23 | 99.4 |
| MsG0880045690.01.T01 | MTR_8g012970 | 23.822 | 382 | 249 | 11 | 7 | 361 | 90 | 456 | 1.08e-22 | 99.4 |
| MsG0880045690.01.T01 | MTR_0045s0070 | 24.409 | 381 | 242 | 12 | 7 | 361 | 87 | 447 | 1.81e-22 | 98.6 |
| MsG0880045690.01.T01 | MTR_0045s0070 | 24.409 | 381 | 242 | 12 | 7 | 361 | 87 | 447 | 3.06e-22 | 97.8 |
| MsG0880045690.01.T01 | MTR_5g014240 | 25.266 | 376 | 233 | 12 | 18 | 361 | 100 | 459 | 5.04e-22 | 97.4 |
| MsG0880045690.01.T01 | MTR_3g467140 | 23.342 | 377 | 244 | 11 | 13 | 358 | 82 | 444 | 1.25e-21 | 96.3 |
| MsG0880045690.01.T01 | MTR_7g016040 | 25.275 | 273 | 191 | 4 | 19 | 290 | 83 | 343 | 1.43e-21 | 95.1 |
| MsG0880045690.01.T01 | MTR_8g016180 | 25.231 | 325 | 210 | 9 | 23 | 333 | 96 | 401 | 1.88e-21 | 95.1 |
| MsG0880045690.01.T01 | MTR_5g020020 | 24.556 | 338 | 199 | 10 | 67 | 362 | 54 | 377 | 3.55e-21 | 94.4 |
| MsG0880045690.01.T01 | MTR_5g010750 | 23.158 | 380 | 258 | 9 | 6 | 361 | 72 | 441 | 3.64e-21 | 94.7 |
| MsG0880045690.01.T01 | MTR_5g010750 | 23.158 | 380 | 258 | 9 | 6 | 361 | 72 | 441 | 4.23e-21 | 94.7 |
| MsG0880045690.01.T01 | MTR_1g032950 | 23.333 | 360 | 225 | 8 | 29 | 361 | 109 | 444 | 1.01e-20 | 93.6 |
| MsG0880045690.01.T01 | MTR_1g032980 | 23.967 | 363 | 214 | 10 | 7 | 361 | 61 | 369 | 1.02e-20 | 92.8 |
| MsG0880045690.01.T01 | MTR_0045s0080 | 23.875 | 289 | 190 | 9 | 7 | 289 | 87 | 351 | 1.46e-20 | 92.4 |
| MsG0880045690.01.T01 | MTR_3g467140 | 25.240 | 313 | 195 | 9 | 74 | 358 | 10 | 311 | 4.15e-20 | 90.5 |
| MsG0880045690.01.T01 | MTR_4g005230 | 24.934 | 381 | 246 | 12 | 7 | 361 | 88 | 454 | 1.24e-19 | 90.5 |
| MsG0880045690.01.T01 | MTR_8g100135 | 23.048 | 269 | 195 | 2 | 23 | 287 | 94 | 354 | 2.33e-18 | 85.9 |
| MsG0880045690.01.T01 | MTR_7g096340 | 23.177 | 384 | 228 | 13 | 19 | 350 | 90 | 458 | 4.35e-13 | 70.5 |
| MsG0880045690.01.T01 | MTR_4g029690 | 22.785 | 237 | 164 | 8 | 7 | 233 | 88 | 315 | 1.15e-11 | 65.5 |
| MsG0880045690.01.T01 | MTR_0147s0030 | 24.506 | 253 | 143 | 6 | 145 | 361 | 260 | 500 | 1.60e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045690.01.T01 | AT1G19630 | 38.919 | 370 | 193 | 5 | 14 | 361 | 86 | 444 | 1.21e-76 | 243 |
| MsG0880045690.01.T01 | AT1G19630 | 38.919 | 370 | 193 | 5 | 14 | 361 | 86 | 444 | 2.65e-76 | 243 |
| MsG0880045690.01.T01 | AT1G19630 | 40.678 | 295 | 160 | 4 | 14 | 304 | 86 | 369 | 1.10e-64 | 212 |
| MsG0880045690.01.T01 | AT2G29090 | 27.520 | 367 | 234 | 7 | 16 | 361 | 2 | 357 | 4.61e-37 | 138 |
| MsG0880045690.01.T01 | AT2G29090 | 27.520 | 367 | 234 | 7 | 16 | 361 | 97 | 452 | 2.95e-36 | 137 |
| MsG0880045690.01.T01 | AT2G29090 | 27.520 | 367 | 234 | 7 | 16 | 361 | 97 | 452 | 2.95e-36 | 137 |
| MsG0880045690.01.T01 | AT4G19230 | 27.174 | 368 | 229 | 7 | 16 | 362 | 84 | 433 | 6.68e-35 | 133 |
| MsG0880045690.01.T01 | AT4G19230 | 27.248 | 367 | 228 | 7 | 16 | 361 | 84 | 432 | 1.43e-34 | 133 |
| MsG0880045690.01.T01 | AT5G45340 | 26.158 | 367 | 232 | 7 | 16 | 361 | 84 | 432 | 1.15e-33 | 130 |
| MsG0880045690.01.T01 | AT5G45340 | 26.158 | 367 | 232 | 7 | 16 | 361 | 84 | 432 | 1.45e-33 | 130 |
| MsG0880045690.01.T01 | AT3G19270 | 26.757 | 370 | 228 | 8 | 18 | 361 | 84 | 436 | 3.30e-32 | 125 |
| MsG0880045690.01.T01 | AT3G19270 | 26.757 | 370 | 228 | 8 | 18 | 361 | 84 | 436 | 4.23e-32 | 125 |
| MsG0880045690.01.T01 | AT1G05160 | 25.515 | 388 | 239 | 10 | 7 | 361 | 90 | 460 | 1.31e-31 | 124 |
| MsG0880045690.01.T01 | AT1G05160 | 25.515 | 388 | 239 | 10 | 7 | 361 | 90 | 460 | 1.31e-31 | 124 |
| MsG0880045690.01.T01 | AT2G32440 | 25.132 | 378 | 233 | 10 | 16 | 361 | 98 | 457 | 8.30e-28 | 114 |
| MsG0880045690.01.T01 | AT2G32440 | 25.132 | 378 | 233 | 10 | 16 | 361 | 98 | 457 | 8.30e-28 | 114 |
| MsG0880045690.01.T01 | AT5G05690 | 28.342 | 374 | 219 | 9 | 19 | 362 | 86 | 440 | 3.05e-27 | 112 |
| MsG0880045690.01.T01 | AT5G14400 | 26.590 | 346 | 230 | 7 | 25 | 361 | 3 | 333 | 5.39e-25 | 104 |
| MsG0880045690.01.T01 | AT5G14400 | 26.590 | 346 | 230 | 7 | 25 | 361 | 57 | 387 | 7.83e-25 | 104 |
| MsG0880045690.01.T01 | AT5G14400 | 26.590 | 346 | 230 | 7 | 25 | 361 | 57 | 387 | 8.12e-25 | 105 |
| MsG0880045690.01.T01 | AT4G36380 | 24.324 | 370 | 244 | 9 | 20 | 362 | 125 | 485 | 8.45e-25 | 105 |
| MsG0880045690.01.T01 | AT3G13730 | 24.865 | 370 | 237 | 9 | 20 | 361 | 107 | 463 | 2.08e-24 | 104 |
| MsG0880045690.01.T01 | AT3G13730 | 24.865 | 370 | 237 | 9 | 20 | 361 | 107 | 463 | 2.30e-24 | 104 |
| MsG0880045690.01.T01 | AT2G42850 | 26.064 | 376 | 220 | 13 | 20 | 361 | 102 | 453 | 5.50e-24 | 103 |
| MsG0880045690.01.T01 | AT5G38970 | 25.886 | 367 | 232 | 9 | 20 | 361 | 4 | 355 | 6.12e-23 | 99.4 |
| MsG0880045690.01.T01 | AT5G38970 | 25.886 | 367 | 232 | 9 | 20 | 361 | 4 | 355 | 6.12e-23 | 99.4 |
| MsG0880045690.01.T01 | AT5G38970 | 25.886 | 367 | 232 | 9 | 20 | 361 | 85 | 436 | 2.44e-22 | 98.2 |
| MsG0880045690.01.T01 | AT3G50660 | 23.858 | 394 | 231 | 8 | 23 | 358 | 98 | 480 | 3.01e-22 | 98.2 |
| MsG0880045690.01.T01 | AT1G12740 | 24.390 | 369 | 234 | 9 | 25 | 361 | 92 | 447 | 4.41e-22 | 97.4 |
| MsG0880045690.01.T01 | AT5G36110 | 24.021 | 383 | 245 | 8 | 7 | 361 | 81 | 445 | 5.66e-22 | 97.4 |
| MsG0880045690.01.T01 | AT5G05690 | 28.369 | 282 | 163 | 5 | 107 | 362 | 53 | 321 | 5.95e-22 | 95.9 |
| MsG0880045690.01.T01 | AT1G12740 | 24.518 | 363 | 235 | 9 | 25 | 361 | 98 | 447 | 7.85e-22 | 97.1 |
| MsG0880045690.01.T01 | AT1G73340 | 23.873 | 377 | 230 | 11 | 19 | 361 | 98 | 451 | 8.43e-22 | 96.7 |
| MsG0880045690.01.T01 | AT1G12740 | 24.518 | 363 | 235 | 9 | 25 | 361 | 92 | 441 | 9.65e-22 | 96.7 |
| MsG0880045690.01.T01 | AT5G14400 | 28.014 | 282 | 184 | 5 | 25 | 300 | 57 | 325 | 2.05e-21 | 94.0 |
| MsG0880045690.01.T01 | AT4G15396 | 24.471 | 331 | 227 | 9 | 36 | 358 | 104 | 419 | 3.98e-20 | 91.7 |
| MsG0880045690.01.T01 | AT3G30180 | 24.054 | 370 | 235 | 7 | 20 | 361 | 85 | 436 | 5.72e-20 | 91.3 |
| MsG0880045690.01.T01 | AT5G38970 | 26.132 | 287 | 196 | 5 | 20 | 303 | 85 | 358 | 3.32e-19 | 88.6 |
| MsG0880045690.01.T01 | AT4G15396 | 24.294 | 354 | 220 | 11 | 36 | 358 | 104 | 440 | 4.09e-19 | 88.6 |
| MsG0880045690.01.T01 | AT4G15396 | 24.294 | 354 | 220 | 11 | 36 | 358 | 104 | 440 | 4.88e-19 | 88.6 |
| MsG0880045690.01.T01 | AT2G29090 | 27.928 | 222 | 155 | 4 | 16 | 235 | 97 | 315 | 5.58e-19 | 87.4 |
| MsG0880045690.01.T01 | AT3G30290 | 24.277 | 346 | 227 | 9 | 36 | 357 | 34 | 368 | 1.10e-18 | 87.0 |
| MsG0880045690.01.T01 | AT5G05690 | 27.759 | 299 | 179 | 7 | 19 | 304 | 86 | 360 | 1.80e-18 | 86.7 |
| MsG0880045690.01.T01 | AT4G36380 | 24.828 | 290 | 204 | 6 | 20 | 304 | 125 | 405 | 2.26e-18 | 86.3 |
| MsG0880045690.01.T01 | AT1G65670 | 22.520 | 373 | 236 | 10 | 21 | 358 | 81 | 435 | 1.10e-17 | 84.7 |
| MsG0880045690.01.T01 | AT4G15300 | 24.576 | 354 | 216 | 10 | 36 | 357 | 94 | 428 | 2.92e-17 | 83.2 |
| MsG0880045690.01.T01 | AT4G15300 | 24.576 | 354 | 216 | 10 | 36 | 357 | 104 | 438 | 3.04e-17 | 83.2 |
| MsG0880045690.01.T01 | AT4G15393 | 27.347 | 245 | 131 | 10 | 143 | 357 | 210 | 437 | 3.47e-16 | 80.1 |
| MsG0880045690.01.T01 | AT3G50660 | 24.342 | 304 | 196 | 7 | 23 | 301 | 98 | 392 | 5.10e-16 | 79.3 |
| MsG0880045690.01.T01 | AT1G12740 | 23.759 | 282 | 197 | 6 | 25 | 301 | 92 | 360 | 5.48e-16 | 79.0 |
| MsG0880045690.01.T01 | AT4G15300 | 23.641 | 368 | 216 | 11 | 36 | 357 | 102 | 450 | 3.28e-14 | 73.9 |
| MsG0880045690.01.T01 | AT2G44890 | 24.603 | 378 | 245 | 12 | 15 | 355 | 82 | 456 | 6.15e-14 | 73.2 |
| MsG0880045690.01.T01 | AT5G36110 | 24.221 | 289 | 192 | 6 | 7 | 286 | 81 | 351 | 7.67e-14 | 72.4 |
| MsG0880045690.01.T01 | AT2G42850 | 24.843 | 318 | 192 | 11 | 6 | 300 | 81 | 374 | 1.16e-13 | 72.0 |
| MsG0880045690.01.T01 | AT3G44970 | 24.403 | 377 | 239 | 11 | 21 | 361 | 81 | 447 | 1.24e-13 | 72.4 |
| MsG0880045690.01.T01 | AT2G45510 | 23.350 | 394 | 240 | 12 | 19 | 355 | 86 | 474 | 2.54e-13 | 71.2 |
| MsG0880045690.01.T01 | AT5G48000 | 23.404 | 235 | 142 | 6 | 153 | 361 | 225 | 447 | 1.54e-12 | 68.9 |
| MsG0880045690.01.T01 | AT5G48000 | 23.404 | 235 | 142 | 6 | 153 | 361 | 225 | 447 | 1.54e-12 | 68.9 |
| MsG0880045690.01.T01 | AT5G48000 | 23.404 | 235 | 142 | 6 | 153 | 361 | 225 | 447 | 1.54e-12 | 68.9 |
| MsG0880045690.01.T01 | AT5G48000 | 23.404 | 235 | 142 | 6 | 153 | 361 | 225 | 447 | 1.54e-12 | 68.9 |
| MsG0880045690.01.T01 | AT5G48000 | 23.404 | 235 | 142 | 6 | 153 | 361 | 225 | 447 | 1.54e-12 | 68.9 |
| MsG0880045690.01.T01 | AT5G48000 | 23.404 | 235 | 142 | 6 | 153 | 361 | 225 | 447 | 1.54e-12 | 68.9 |
| MsG0880045690.01.T01 | AT4G15396 | 23.473 | 311 | 208 | 10 | 36 | 333 | 104 | 397 | 1.99e-12 | 68.2 |
| MsG0880045690.01.T01 | AT5G48000 | 25.424 | 236 | 136 | 8 | 153 | 361 | 266 | 488 | 2.07e-12 | 68.6 |
| MsG0880045690.01.T01 | AT3G14610 | 24.901 | 253 | 136 | 10 | 147 | 358 | 243 | 482 | 6.14e-12 | 67.0 |
| MsG0880045690.01.T01 | AT2G44890 | 22.922 | 397 | 246 | 12 | 15 | 355 | 82 | 474 | 9.35e-12 | 66.6 |
Find 79 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTACAGTTTCATACCTTT+TGG | 0.225176 | 8:+62799553 | MsG0880045690.01.T01:CDS |
| AGCTCCTTCTGGCTTCATTT+TGG | 0.228755 | 8:-62798919 | None:intergenic |
| ACTTGATGACTCGGAGATTA+TGG | 0.234994 | 8:+62798606 | MsG0880045690.01.T01:CDS |
| GAATGTCCAATGTCCTATTA+TGG | 0.276947 | 8:+62799135 | MsG0880045690.01.T01:CDS |
| TAATGTTTATCTTGACTTAC+AGG | 0.278562 | 8:+62798878 | MsG0880045690.01.T01:CDS |
| TGGTTCAAAACACGACTATT+TGG | 0.290737 | 8:+62797400 | MsG0880045690.01.T01:CDS |
| TCCTTTCCAGTCATGATTCC+AGG | 0.313450 | 8:+62798225 | MsG0880045690.01.T01:CDS |
| CGTGATGCCTTTATAGTATC+TGG | 0.323758 | 8:-62798250 | None:intergenic |
| TGATTAAGTGAAGCTCCTTC+TGG | 0.342222 | 8:-62798930 | None:intergenic |
| TTGAAAGCCACAAAAGAATA+AGG | 0.352334 | 8:+62797555 | MsG0880045690.01.T01:CDS |
| AATATCGTCCTTGCACCTTC+AGG | 0.376134 | 8:-62797446 | None:intergenic |
| CAACACGAGGAAACCATAAT+AGG | 0.389415 | 8:-62799148 | None:intergenic |
| GATATCAACAACATGCGTTA+TGG | 0.392253 | 8:+62798957 | MsG0880045690.01.T01:CDS |
| ACATGAAGCAGGCTCGTAAC+AGG | 0.401614 | 8:+62798473 | MsG0880045690.01.T01:intron |
| AATATACAAGTGGAAACAAC+AGG | 0.410960 | 8:+62799310 | MsG0880045690.01.T01:CDS |
| GACTTGCCTCGGGATGAATA+TGG | 0.425162 | 8:+62799588 | MsG0880045690.01.T01:CDS |
| CTTTCATCATCAGTCTCTCT+TGG | 0.426586 | 8:+62799267 | MsG0880045690.01.T01:intron |
| CTCTCTGCAACATGGTCTGC+AGG | 0.431559 | 8:-62798561 | None:intergenic |
| CTTAAAGACTGTACAATTGA+AGG | 0.431906 | 8:+62799173 | MsG0880045690.01.T01:CDS |
| CCAGGCACCAGATACTATAA+AGG | 0.436770 | 8:+62798243 | MsG0880045690.01.T01:CDS |
| CAACATGCGTTATGGTTTGA+AGG | 0.437098 | 8:+62798965 | MsG0880045690.01.T01:CDS |
| CTCTTCTCCCCTCCTACGTC+TGG | 0.442266 | 8:-62798524 | None:intergenic |
| AGGAGGGGAGAAGAGTCTCC+AGG | 0.464702 | 8:+62798532 | MsG0880045690.01.T01:CDS |
| CCTTTATAGTATCTGGTGCC+TGG | 0.486535 | 8:-62798243 | None:intergenic |
| TCTGGCAATGATTTCTCTGA+AGG | 0.495098 | 8:-62798506 | None:intergenic |
| CAAGGGTTATGTAAAATCAA+TGG | 0.503121 | 8:+62797493 | MsG0880045690.01.T01:CDS |
| TAGAGAGAGGTCATGGAGAA+TGG | 0.514325 | 8:-62797593 | None:intergenic |
| TTGACAAATTGTTGTGTGGA+AGG | 0.520158 | 8:+62797633 | MsG0880045690.01.T01:CDS |
| CTGGTGCCTGGAATCATGAC+TGG | 0.530239 | 8:-62798231 | None:intergenic |
| TTCATCCCGAGGCAAGTCCT+AGG | 0.532538 | 8:-62799583 | None:intergenic |
| CCAAAAGGTATGAAACTGTA+GGG | 0.535541 | 8:-62799553 | None:intergenic |
| TGCAAAAGCTAGAAGAAAGC+GGG | 0.537584 | 8:+62797657 | MsG0880045690.01.T01:CDS |
| TATGTTATTAAATATACAAG+TGG | 0.537711 | 8:+62799300 | MsG0880045690.01.T01:CDS |
| GGAGGGGAGAAGAGTCTCCA+GGG | 0.538557 | 8:+62798533 | MsG0880045690.01.T01:CDS |
| CGGGAAAAGTTTCAAAACGT+TGG | 0.541351 | 8:+62797676 | MsG0880045690.01.T01:CDS |
| ATGGTCTGCAGGAAGTCCCC+TGG | 0.543782 | 8:-62798550 | None:intergenic |
| AGGACGCACAGGATATGCTC+AGG | 0.549240 | 8:+62798713 | MsG0880045690.01.T01:CDS |
| AAATGCATAGAGAGAGGTCA+TGG | 0.551762 | 8:-62797600 | None:intergenic |
| GCAGGCTCGTAACAGGCTCA+TGG | 0.553120 | 8:+62798480 | MsG0880045690.01.T01:intron |
| AATCATTGCCAGACGTAGGA+GGG | 0.558050 | 8:+62798516 | MsG0880045690.01.T01:CDS |
| AAAATCAATGGCAGATGCCG+TGG | 0.559258 | 8:+62797505 | MsG0880045690.01.T01:CDS |
| CAAAACGTTGGACTTCTGCA+TGG | 0.559775 | 8:+62797688 | MsG0880045690.01.T01:CDS |
| GACTTTGATCTATTCAACAA+GGG | 0.559944 | 8:+62797476 | MsG0880045690.01.T01:CDS |
| TCCAAAAGGTATGAAACTGT+AGG | 0.563200 | 8:-62799554 | None:intergenic |
| GTCCTAGGTCCTGATCCAAA+AGG | 0.571182 | 8:-62799568 | None:intergenic |
| ACATGACAACAAGGACGCAC+AGG | 0.574514 | 8:+62798702 | MsG0880045690.01.T01:CDS |
| AAATCATTGCCAGACGTAGG+AGG | 0.578592 | 8:+62798515 | MsG0880045690.01.T01:CDS |
| TCAGGACCTAGGACTTGCCT+CGG | 0.579057 | 8:+62799577 | MsG0880045690.01.T01:CDS |
| ATCATTGCCAGACGTAGGAG+GGG | 0.583974 | 8:+62798517 | MsG0880045690.01.T01:CDS |
| TTCAGGAGTAGGTATATATG+TGG | 0.584415 | 8:-62797429 | None:intergenic |
| CAGGACCTAGGACTTGCCTC+GGG | 0.593353 | 8:+62799578 | MsG0880045690.01.T01:CDS |
| GTCCTTGCACCTTCAGGAGT+AGG | 0.596737 | 8:-62797440 | None:intergenic |
| CTACAGCAGCAGCAATGATG+TGG | 0.599535 | 8:+62798665 | MsG0880045690.01.T01:CDS |
| ATGTGAGTAGGCATGGAAGA+TGG | 0.600438 | 8:+62797380 | None:intergenic |
| TACCTACTCCTGAAGGTGCA+AGG | 0.600710 | 8:+62797438 | MsG0880045690.01.T01:CDS |
| AGGAAACCATAATAGGACAT+TGG | 0.610902 | 8:-62799141 | None:intergenic |
| AAATGAATCTCTCTGCAACA+TGG | 0.615007 | 8:-62798569 | None:intergenic |
| TGTGATAAATGCATAGAGAG+AGG | 0.621983 | 8:-62797606 | None:intergenic |
| TGACTTTGATCTATTCAACA+AGG | 0.625567 | 8:+62797475 | MsG0880045690.01.T01:CDS |
| ACATATATACCTACTCCTGA+AGG | 0.633447 | 8:+62797431 | MsG0880045690.01.T01:CDS |
| CATGACTGGAAAGGACAACA+TGG | 0.638538 | 8:-62798217 | None:intergenic |
| CTGCAAAAGCTAGAAGAAAG+CGG | 0.639609 | 8:+62797656 | MsG0880045690.01.T01:CDS |
| AAATCAATGGCAGATGCCGT+GGG | 0.647584 | 8:+62797506 | MsG0880045690.01.T01:CDS |
| CAAAACACGACTATTTGGCA+AGG | 0.649426 | 8:+62797405 | MsG0880045690.01.T01:CDS |
| AAATTTGACAAATTGTTGTG+TGG | 0.649515 | 8:+62797629 | MsG0880045690.01.T01:CDS |
| TTAACCAAAATGAAGCCAGA+AGG | 0.652709 | 8:+62798915 | MsG0880045690.01.T01:CDS |
| TATGGCAAAAGTGACAATGT+TGG | 0.661594 | 8:+62799606 | MsG0880045690.01.T01:CDS |
| TTTCTACACAGACTAACTAG+TGG | 0.663051 | 8:+62799631 | MsG0880045690.01.T01:CDS |
| GCCTGGAATCATGACTGGAA+AGG | 0.666852 | 8:-62798226 | None:intergenic |
| GGACGCACAGGATATGCTCA+GGG | 0.672335 | 8:+62798714 | MsG0880045690.01.T01:CDS |
| CAGATACTATAAAGGCATCA+CGG | 0.673355 | 8:+62798251 | MsG0880045690.01.T01:CDS |
| GAGGGGAGAAGAGTCTCCAG+GGG | 0.688230 | 8:+62798534 | MsG0880045690.01.T01:CDS |
| AAAATTTCTACATGACAACA+AGG | 0.694866 | 8:+62798693 | MsG0880045690.01.T01:CDS |
| AACGTTGGACTTCTGCATGG+AGG | 0.701521 | 8:+62797691 | MsG0880045690.01.T01:CDS |
| GAGAAATCATTGCCAGACGT+AGG | 0.707533 | 8:+62798512 | MsG0880045690.01.T01:CDS |
| CAGTCTTTAAGTGCAACACG+AGG | 0.710763 | 8:-62799161 | None:intergenic |
| ATATACAAGTGGAAACAACA+GGG | 0.721083 | 8:+62799311 | MsG0880045690.01.T01:CDS |
| ATGACATTTGATGCAATGTG+TGG | 0.723509 | 8:+62798123 | MsG0880045690.01.T01:CDS |
| TATGCTGATGAGCATCACAG+AGG | 0.775370 | 8:+62798146 | MsG0880045690.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTTAAATTTATTTTAATTC+TGG | - | Chr8:62798338-62798357 | None:intergenic | 10.0% |
| !! | TATGTTATTAAATATACAAG+TGG | + | Chr8:62799300-62799319 | MsG0880045690.01.T01:CDS | 15.0% |
| !!! | TAAAATAATTTTCTGACATT+TGG | - | Chr8:62799504-62799523 | None:intergenic | 15.0% |
| !! | AAACAGTCAAGAAAAATAAA+AGG | - | Chr8:62799471-62799490 | None:intergenic | 20.0% |
| !! | ACAGTTATAGTTGTAAAAAT+TGG | + | Chr8:62798748-62798767 | MsG0880045690.01.T01:intron | 20.0% |
| !!! | ACTTGAAATTGGTATTTTTA+AGG | - | Chr8:62798044-62798063 | None:intergenic | 20.0% |
| !!! | CATTATACTTAACTTGAAAT+TGG | - | Chr8:62798055-62798074 | None:intergenic | 20.0% |
| !!! | CATTTAAGTTATTCTGTAAT+AGG | - | Chr8:62799069-62799088 | None:intergenic | 20.0% |
| !!! | TTAAATTTAGCCTTAACTAT+TGG | + | Chr8:62799240-62799259 | MsG0880045690.01.T01:intron | 20.0% |
| ! | AAAATTTCTACATGACAACA+AGG | + | Chr8:62798693-62798712 | MsG0880045690.01.T01:CDS | 25.0% |
| ! | AAACATTTCATAGTAGTTAG+GGG | - | Chr8:62798094-62798113 | None:intergenic | 25.0% |
| ! | AAATTTGACAAATTGTTGTG+TGG | + | Chr8:62797629-62797648 | MsG0880045690.01.T01:CDS | 25.0% |
| ! | AATAAAAGGCAAAATAAGAG+AGG | - | Chr8:62799457-62799476 | None:intergenic | 25.0% |
| ! | AGGTTACGTATAGTTTATTT+GGG | - | Chr8:62799009-62799028 | None:intergenic | 25.0% |
| ! | ATAAAAGGCAAAATAAGAGA+GGG | - | Chr8:62799456-62799475 | None:intergenic | 25.0% |
| ! | CAAACATTTCATAGTAGTTA+GGG | - | Chr8:62798095-62798114 | None:intergenic | 25.0% |
| ! | GTAATAATTGTAGATCTGTT+TGG | - | Chr8:62798775-62798794 | None:intergenic | 25.0% |
| ! | TAAATTAGTCAGTACTTCAT+AGG | - | Chr8:62798382-62798401 | None:intergenic | 25.0% |
| ! | TAATGTTTATCTTGACTTAC+AGG | + | Chr8:62798878-62798897 | MsG0880045690.01.T01:CDS | 25.0% |
| ! | TAGGTTACGTATAGTTTATT+TGG | - | Chr8:62799010-62799029 | None:intergenic | 25.0% |
| ! | TAGTTACATCAAATCTTTGT+GGG | - | Chr8:62799426-62799445 | None:intergenic | 25.0% |
| ! | TATGATAAGTGGTACATAAA+AGG | + | Chr8:62797756-62797775 | MsG0880045690.01.T01:intron | 25.0% |
| !! | TATTAGTTCTTCAATGAGAA+AGG | + | Chr8:62798302-62798321 | MsG0880045690.01.T01:intron | 25.0% |
| !! | TTTTACGTATTTATATCTGC+AGG | + | Chr8:62799519-62799538 | MsG0880045690.01.T01:intron | 25.0% |
| !!! | AAGGTTTTAAATAACAGTCA+CGG | - | Chr8:62798025-62798044 | None:intergenic | 25.0% |
| !!! | ATGAAGTACTGACTAATTTA+AGG | + | Chr8:62798382-62798401 | MsG0880045690.01.T01:intron | 25.0% |
| !!! | ATTTTAATTCTGGTACTAGT+AGG | - | Chr8:62798328-62798347 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTTGCAATTTCCA+AGG | + | Chr8:62797987-62798006 | MsG0880045690.01.T01:intron | 25.0% |
| AATATACAAGTGGAAACAAC+AGG | + | Chr8:62799310-62799329 | MsG0880045690.01.T01:CDS | 30.0% | |
| ACAGGGTATGAAATAAAGAA+AGG | + | Chr8:62799328-62799347 | MsG0880045690.01.T01:intron | 30.0% | |
| ATAACGTTGATACATATGAC+TGG | - | Chr8:62798797-62798816 | None:intergenic | 30.0% | |
| ATATACAAGTGGAAACAACA+GGG | + | Chr8:62799311-62799330 | MsG0880045690.01.T01:CDS | 30.0% | |
| ATGAAAGTTCAGAGAAGAAA+AGG | - | Chr8:62798433-62798452 | None:intergenic | 30.0% | |
| CAAATGTAACAGCATTTAGA+TGG | + | Chr8:62797817-62797836 | MsG0880045690.01.T01:intron | 30.0% | |
| CAACTGTAGCAACATTTAAA+TGG | + | Chr8:62797856-62797875 | MsG0880045690.01.T01:intron | 30.0% | |
| CAAGACAGGAATCATTATAT+AGG | - | Chr8:62799029-62799048 | None:intergenic | 30.0% | |
| CAAGGGTTATGTAAAATCAA+TGG | + | Chr8:62797493-62797512 | MsG0880045690.01.T01:CDS | 30.0% | |
| CCAAACATTTCATAGTAGTT+AGG | - | Chr8:62798096-62798115 | None:intergenic | 30.0% | |
| CCTAACTACTATGAAATGTT+TGG | + | Chr8:62798093-62798112 | MsG0880045690.01.T01:intron | 30.0% | |
| CTAGTTACATCAAATCTTTG+TGG | - | Chr8:62799427-62799446 | None:intergenic | 30.0% | |
| CTTAAAGACTGTACAATTGA+AGG | + | Chr8:62799173-62799192 | MsG0880045690.01.T01:CDS | 30.0% | |
| CTTATCATACTTGACTAAGA+AGG | - | Chr8:62797745-62797764 | None:intergenic | 30.0% | |
| GACTTTGATCTATTCAACAA+GGG | + | Chr8:62797476-62797495 | MsG0880045690.01.T01:CDS | 30.0% | |
| GGTATGAAATAAAGAAAGGT+TGG | + | Chr8:62799332-62799351 | MsG0880045690.01.T01:intron | 30.0% | |
| TCTTAGTCAAGTATGATAAG+TGG | + | Chr8:62797745-62797764 | MsG0880045690.01.T01:intron | 30.0% | |
| TGACTTTGATCTATTCAACA+AGG | + | Chr8:62797475-62797494 | MsG0880045690.01.T01:CDS | 30.0% | |
| TTAAGTATAATGTGACATCG+TGG | + | Chr8:62798063-62798082 | MsG0880045690.01.T01:intron | 30.0% | |
| TTGAAAGCCACAAAAGAATA+AGG | + | Chr8:62797555-62797574 | MsG0880045690.01.T01:CDS | 30.0% | |
| ! | AATTTTCTGACATTTGGACA+TGG | - | Chr8:62799498-62799517 | None:intergenic | 30.0% |
| ! | CTTTGTGGGTTAAATTTCAA+TGG | - | Chr8:62799412-62799431 | None:intergenic | 30.0% |
| ! | TTATGACTCAGATCTTTTCA+TGG | + | Chr8:62799384-62799403 | MsG0880045690.01.T01:intron | 30.0% |
| !! | AATTTAGCCTTAACTATTGG+AGG | + | Chr8:62799243-62799262 | MsG0880045690.01.T01:intron | 30.0% |
| !! | ATTTAGCCTTAACTATTGGA+GGG | + | Chr8:62799244-62799263 | MsG0880045690.01.T01:intron | 30.0% |
| !! | CTTTTGACATTGATAATTGC+TGG | + | Chr8:62798634-62798653 | MsG0880045690.01.T01:CDS | 30.0% |
| AAACATTATCCTAACGTGCA+AGG | - | Chr8:62798866-62798885 | None:intergenic | 35.0% | |
| AAATGAATCTCTCTGCAACA+TGG | - | Chr8:62798572-62798591 | None:intergenic | 35.0% | |
| AACATTATCCTAACGTGCAA+GGG | - | Chr8:62798865-62798884 | None:intergenic | 35.0% | |
| ACATATATACCTACTCCTGA+AGG | + | Chr8:62797431-62797450 | MsG0880045690.01.T01:CDS | 35.0% | |
| ACTAAGAAGGCAACATAAGT+GGG | - | Chr8:62797732-62797751 | None:intergenic | 35.0% | |
| AGGAAACCATAATAGGACAT+TGG | - | Chr8:62799144-62799163 | None:intergenic | 35.0% | |
| ATGACATTTGATGCAATGTG+TGG | + | Chr8:62798123-62798142 | MsG0880045690.01.T01:CDS | 35.0% | |
| CTAAAGAAGATACATGAAGC+AGG | + | Chr8:62798462-62798481 | MsG0880045690.01.T01:intron | 35.0% | |
| GAATGTCCAATGTCCTATTA+TGG | + | Chr8:62799135-62799154 | MsG0880045690.01.T01:CDS | 35.0% | |
| GATATCAACAACATGCGTTA+TGG | + | Chr8:62798957-62798976 | MsG0880045690.01.T01:CDS | 35.0% | |
| GCAATTTCCAAGGATCATAA+CGG | + | Chr8:62797997-62798016 | MsG0880045690.01.T01:intron | 35.0% | |
| TATGGCAAAAGTGACAATGT+TGG | + | Chr8:62799606-62799625 | MsG0880045690.01.T01:CDS | 35.0% | |
| TGGTTCAAAACACGACTATT+TGG | + | Chr8:62797400-62797419 | MsG0880045690.01.T01:CDS | 35.0% | |
| TGTGATAAATGCATAGAGAG+AGG | - | Chr8:62797609-62797628 | None:intergenic | 35.0% | |
| TTAACCAAAATGAAGCCAGA+AGG | + | Chr8:62798915-62798934 | MsG0880045690.01.T01:CDS | 35.0% | |
| TTCAGGAGTAGGTATATATG+TGG | - | Chr8:62797432-62797451 | None:intergenic | 35.0% | |
| TTGACAAATTGTTGTGTGGA+AGG | + | Chr8:62797633-62797652 | MsG0880045690.01.T01:CDS | 35.0% | |
| TTTCTACACAGACTAACTAG+TGG | + | Chr8:62799631-62799650 | MsG0880045690.01.T01:CDS | 35.0% | |
| ! | AATCTCTGTGTTTTCTCTTC+AGG | + | Chr8:62799094-62799113 | MsG0880045690.01.T01:intron | 35.0% |
| ! | AGTTTCATACCTTTTGGATC+AGG | + | Chr8:62799559-62799578 | MsG0880045690.01.T01:CDS | 35.0% |
| ! | ATTCTTTTGTGGCTTTCAAC+TGG | - | Chr8:62797554-62797573 | None:intergenic | 35.0% |
| ! | CAGTGAAAAACTTGATGACT+CGG | + | Chr8:62798597-62798616 | MsG0880045690.01.T01:CDS | 35.0% |
| ! | CCAAAAGGTATGAAACTGTA+GGG | - | Chr8:62799556-62799575 | None:intergenic | 35.0% |
| ! | GTTTTCTCTTCAGGTAGTTA+AGG | + | Chr8:62799103-62799122 | MsG0880045690.01.T01:intron | 35.0% |
| ! | TAACAAGCTTTTCTTACCCA+CGG | - | Chr8:62797525-62797544 | None:intergenic | 35.0% |
| ! | TCCAAAAGGTATGAAACTGT+AGG | - | Chr8:62799557-62799576 | None:intergenic | 35.0% |
| !! | CAGATACTATAAAGGCATCA+CGG | + | Chr8:62798251-62798270 | MsG0880045690.01.T01:CDS | 35.0% |
| AAATGCATAGAGAGAGGTCA+TGG | - | Chr8:62797603-62797622 | None:intergenic | 40.0% | |
| ATGCGTTATGGTTTGAAGGT+TGG | + | Chr8:62798969-62798988 | MsG0880045690.01.T01:intron | 40.0% | |
| CAAAACACGACTATTTGGCA+AGG | + | Chr8:62797405-62797424 | MsG0880045690.01.T01:CDS | 40.0% | |
| CAACACGAGGAAACCATAAT+AGG | - | Chr8:62799151-62799170 | None:intergenic | 40.0% | |
| CAACATGCGTTATGGTTTGA+AGG | + | Chr8:62798965-62798984 | MsG0880045690.01.T01:CDS | 40.0% | |
| CGGGAAAAGTTTCAAAACGT+TGG | + | Chr8:62797676-62797695 | MsG0880045690.01.T01:CDS | 40.0% | |
| CGTGATGCCTTTATAGTATC+TGG | - | Chr8:62798253-62798272 | None:intergenic | 40.0% | |
| CTAAGAAGGCAACATAAGTG+GGG | - | Chr8:62797731-62797750 | None:intergenic | 40.0% | |
| CTGCAAAAGCTAGAAGAAAG+CGG | + | Chr8:62797656-62797675 | MsG0880045690.01.T01:CDS | 40.0% | |
| CTTTCATCATCAGTCTCTCT+TGG | + | Chr8:62799267-62799286 | MsG0880045690.01.T01:intron | 40.0% | |
| GACTAAGAAGGCAACATAAG+TGG | - | Chr8:62797733-62797752 | None:intergenic | 40.0% | |
| TAAGAAGGCAACATAAGTGG+GGG | - | Chr8:62797730-62797749 | None:intergenic | 40.0% | |
| TCTGGCAATGATTTCTCTGA+AGG | - | Chr8:62798509-62798528 | None:intergenic | 40.0% | |
| TGAAAGCCCTCCAATAGTTA+AGG | - | Chr8:62799253-62799272 | None:intergenic | 40.0% | |
| TGATTAAGTGAAGCTCCTTC+TGG | - | Chr8:62798933-62798952 | None:intergenic | 40.0% | |
| TGCAAAAGCTAGAAGAAAGC+GGG | + | Chr8:62797657-62797676 | MsG0880045690.01.T01:CDS | 40.0% | |
| TGTAATAGGTGCTTCCAGTT+TGG | - | Chr8:62799055-62799074 | None:intergenic | 40.0% | |
| ! | ACTTGATGACTCGGAGATTA+TGG | + | Chr8:62798606-62798625 | MsG0880045690.01.T01:CDS | 40.0% |
| ! | CCCTACAGTTTCATACCTTT+TGG | + | Chr8:62799553-62799572 | MsG0880045690.01.T01:CDS | 40.0% |
| ! | CGAGTCATCAAGTTTTTCAC+TGG | - | Chr8:62798599-62798618 | None:intergenic | 40.0% |
| ! | TCATCAAGTTTTTCACTGGC+TGG | - | Chr8:62798595-62798614 | None:intergenic | 40.0% |
| !! | GAAGACGCCTTATTCTTTTG+TGG | - | Chr8:62797565-62797584 | None:intergenic | 40.0% |
| AAAATCAATGGCAGATGCCG+TGG | + | Chr8:62797505-62797524 | MsG0880045690.01.T01:CDS | 45.0% | |
| AAATCAATGGCAGATGCCGT+GGG | + | Chr8:62797506-62797525 | MsG0880045690.01.T01:CDS | 45.0% | |
| AAATCATTGCCAGACGTAGG+AGG | + | Chr8:62798515-62798534 | MsG0880045690.01.T01:CDS | 45.0% | |
| AATATCGTCCTTGCACCTTC+AGG | - | Chr8:62797449-62797468 | None:intergenic | 45.0% | |
| AATCATTGCCAGACGTAGGA+GGG | + | Chr8:62798516-62798535 | MsG0880045690.01.T01:CDS | 45.0% | |
| ATGACACATGCAGCTGCAAT+TGG | - | Chr8:62797953-62797972 | None:intergenic | 45.0% | |
| CAAAACGTTGGACTTCTGCA+TGG | + | Chr8:62797688-62797707 | MsG0880045690.01.T01:CDS | 45.0% | |
| CAGTCTTTAAGTGCAACACG+AGG | - | Chr8:62799164-62799183 | None:intergenic | 45.0% | |
| CATGACTGGAAAGGACAACA+TGG | - | Chr8:62798220-62798239 | None:intergenic | 45.0% | |
| CCAGGCACCAGATACTATAA+AGG | + | Chr8:62798243-62798262 | MsG0880045690.01.T01:CDS | 45.0% | |
| CCTTTATAGTATCTGGTGCC+TGG | - | Chr8:62798246-62798265 | None:intergenic | 45.0% | |
| GAGAAATCATTGCCAGACGT+AGG | + | Chr8:62798512-62798531 | MsG0880045690.01.T01:CDS | 45.0% | |
| TAGAGAGAGGTCATGGAGAA+TGG | - | Chr8:62797596-62797615 | None:intergenic | 45.0% | |
| TATGCTGATGAGCATCACAG+AGG | + | Chr8:62798146-62798165 | MsG0880045690.01.T01:CDS | 45.0% | |
| TCCTTTCCAGTCATGATTCC+AGG | + | Chr8:62798225-62798244 | MsG0880045690.01.T01:CDS | 45.0% | |
| TGACACATGCAGCTGCAATT+GGG | - | Chr8:62797952-62797971 | None:intergenic | 45.0% | |
| TTCCAGTTTGGAGACAAGAC+AGG | - | Chr8:62799043-62799062 | None:intergenic | 45.0% | |
| TTCCTGTCTTGTCTCCAAAC+TGG | + | Chr8:62799038-62799057 | MsG0880045690.01.T01:intron | 45.0% | |
| ! | CTTTTGCCATATTCATCCCG+AGG | - | Chr8:62799597-62799616 | None:intergenic | 45.0% |
| ! | TACCTTTTGGATCAGGACCT+AGG | + | Chr8:62799566-62799585 | MsG0880045690.01.T01:CDS | 45.0% |
| !!! | AGCTCCTTCTGGCTTCATTT+TGG | - | Chr8:62798922-62798941 | None:intergenic | 45.0% |
| AACGTTGGACTTCTGCATGG+AGG | + | Chr8:62797691-62797710 | MsG0880045690.01.T01:CDS | 50.0% | |
| ACATGAAGCAGGCTCGTAAC+AGG | + | Chr8:62798473-62798492 | MsG0880045690.01.T01:intron | 50.0% | |
| ACATGACAACAAGGACGCAC+AGG | + | Chr8:62798702-62798721 | MsG0880045690.01.T01:CDS | 50.0% | |
| ACGTGCAAGGGAGAACATGA+AGG | - | Chr8:62798853-62798872 | None:intergenic | 50.0% | |
| ATCATTGCCAGACGTAGGAG+GGG | + | Chr8:62798517-62798536 | MsG0880045690.01.T01:CDS | 50.0% | |
| CACGGTTCCGTTATGATCCT+TGG | - | Chr8:62798007-62798026 | None:intergenic | 50.0% | |
| CATGTTCTCCCTTGCACGTT+AGG | + | Chr8:62798854-62798873 | MsG0880045690.01.T01:intron | 50.0% | |
| CTACAGCAGCAGCAATGATG+TGG | + | Chr8:62798665-62798684 | MsG0880045690.01.T01:CDS | 50.0% | |
| GACACATGCAGCTGCAATTG+GGG | - | Chr8:62797951-62797970 | None:intergenic | 50.0% | |
| GACTTGCCTCGGGATGAATA+TGG | + | Chr8:62799588-62799607 | MsG0880045690.01.T01:CDS | 50.0% | |
| GCCTGGAATCATGACTGGAA+AGG | - | Chr8:62798229-62798248 | None:intergenic | 50.0% | |
| GTCCTAGGTCCTGATCCAAA+AGG | - | Chr8:62799571-62799590 | None:intergenic | 50.0% | |
| ! | TACCTACTCCTGAAGGTGCA+AGG | + | Chr8:62797438-62797457 | MsG0880045690.01.T01:CDS | 50.0% |
| AGGACGCACAGGATATGCTC+AGG | + | Chr8:62798713-62798732 | MsG0880045690.01.T01:CDS | 55.0% | |
| CTCTCTGCAACATGGTCTGC+AGG | - | Chr8:62798564-62798583 | None:intergenic | 55.0% | |
| CTGGTGCCTGGAATCATGAC+TGG | - | Chr8:62798234-62798253 | None:intergenic | 55.0% | |
| GGACGCACAGGATATGCTCA+GGG | + | Chr8:62798714-62798733 | MsG0880045690.01.T01:CDS | 55.0% | |
| GTCCTTGCACCTTCAGGAGT+AGG | - | Chr8:62797443-62797462 | None:intergenic | 55.0% | |
| TCAGGACCTAGGACTTGCCT+CGG | + | Chr8:62799577-62799596 | MsG0880045690.01.T01:CDS | 55.0% | |
| TTCATCCCGAGGCAAGTCCT+AGG | - | Chr8:62799586-62799605 | None:intergenic | 55.0% | |
| AGGAGGGGAGAAGAGTCTCC+AGG | + | Chr8:62798532-62798551 | MsG0880045690.01.T01:CDS | 60.0% | |
| ATGGTCTGCAGGAAGTCCCC+TGG | - | Chr8:62798553-62798572 | None:intergenic | 60.0% | |
| CAGGACCTAGGACTTGCCTC+GGG | + | Chr8:62799578-62799597 | MsG0880045690.01.T01:CDS | 60.0% | |
| CTCTTCTCCCCTCCTACGTC+TGG | - | Chr8:62798527-62798546 | None:intergenic | 60.0% | |
| GAGGGGAGAAGAGTCTCCAG+GGG | + | Chr8:62798534-62798553 | MsG0880045690.01.T01:CDS | 60.0% | |
| GCAGGCTCGTAACAGGCTCA+TGG | + | Chr8:62798480-62798499 | MsG0880045690.01.T01:intron | 60.0% | |
| GGAGGGGAGAAGAGTCTCCA+GGG | + | Chr8:62798533-62798552 | MsG0880045690.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 62797392 | 62799663 | 62797392 | ID=MsG0880045690.01;Name=MsG0880045690.01 |
| Chr8 | mRNA | 62797392 | 62799663 | 62797392 | ID=MsG0880045690.01.T01;Parent=MsG0880045690.01;Name=MsG0880045690.01.T01;_AED=0.41;_eAED=0.47;_QI=0|0|0|1|1|1|7|0|362 |
| Chr8 | exon | 62797392 | 62797712 | 62797392 | ID=MsG0880045690.01.T01:exon:23980;Parent=MsG0880045690.01.T01 |
| Chr8 | exon | 62798123 | 62798272 | 62798123 | ID=MsG0880045690.01.T01:exon:23981;Parent=MsG0880045690.01.T01 |
| Chr8 | exon | 62798484 | 62798735 | 62798484 | ID=MsG0880045690.01.T01:exon:23982;Parent=MsG0880045690.01.T01 |
| Chr8 | exon | 62798876 | 62798986 | 62798876 | ID=MsG0880045690.01.T01:exon:23983;Parent=MsG0880045690.01.T01 |
| Chr8 | exon | 62799116 | 62799194 | 62799116 | ID=MsG0880045690.01.T01:exon:23984;Parent=MsG0880045690.01.T01 |
| Chr8 | exon | 62799280 | 62799332 | 62799280 | ID=MsG0880045690.01.T01:exon:23985;Parent=MsG0880045690.01.T01 |
| Chr8 | exon | 62799541 | 62799663 | 62799541 | ID=MsG0880045690.01.T01:exon:23986;Parent=MsG0880045690.01.T01 |
| Chr8 | CDS | 62797392 | 62797712 | 62797392 | ID=MsG0880045690.01.T01:cds;Parent=MsG0880045690.01.T01 |
| Chr8 | CDS | 62798123 | 62798272 | 62798123 | ID=MsG0880045690.01.T01:cds;Parent=MsG0880045690.01.T01 |
| Chr8 | CDS | 62798484 | 62798735 | 62798484 | ID=MsG0880045690.01.T01:cds;Parent=MsG0880045690.01.T01 |
| Chr8 | CDS | 62798876 | 62798986 | 62798876 | ID=MsG0880045690.01.T01:cds;Parent=MsG0880045690.01.T01 |
| Chr8 | CDS | 62799116 | 62799194 | 62799116 | ID=MsG0880045690.01.T01:cds;Parent=MsG0880045690.01.T01 |
| Chr8 | CDS | 62799280 | 62799332 | 62799280 | ID=MsG0880045690.01.T01:cds;Parent=MsG0880045690.01.T01 |
| Chr8 | CDS | 62799541 | 62799663 | 62799541 | ID=MsG0880045690.01.T01:cds;Parent=MsG0880045690.01.T01 |
| Gene Sequence |
| Protein sequence |
